IVF0004157 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTCTTTTAATGACAGTAAGGAAAAATGGTGGTTATTCAAGGATGGAGAAGGAAGACCCAGATGAGAAAAAGCATAGACAAGCTCAGTTCTTGATTTACAAGATAATGGAGCAAGCAAGTAATGGCAGTAAGAGAAGACCTTCATGTCTAAGAATCAGAATAAGAAAGTTTAAGTTAAGGATTGGAAGAAGGTTGAAGAAGATGAAGAAGACAATGGCAATGAGTTTTTCAACAGCAAGAATTGGAATTTGCAGCCAATTGGGACAGCTTAGAAGTTGTAAAAGTTTGTTTGGAAAAGCAAAGGTGGAAACTTTGAACTTTCCTACTGCTTTGGTTGCTTGA ATGGGTCTTTTAATGACAGTAAGGAAAAATGGTGGTTATTCAAGGATGGAGAAGGAAGACCCAGATGAGAAAAAGCATAGACAAGCTCAGTTCTTGATTTACAAGATAATGGAGCAAGCAAGTAATGGCAGTAAGAGAAGACCTTCATGTCTAAGAATCAGAATAAGAAAGTTTAAGTTAAGGATTGGAAGAAGGTTGAAGAAGATGAAGAAGACAATGGCAATGAGTTTTTCAACAGCAAGAATTGGAATTTGCAGCCAATTGGGACAGCTTAGAAGTTGTAAAAGTTTGTTTGGAAAAGCAAAGGTGGAAACTTTGAACTTTCCTACTGCTTTGGTTGCTTGA ATGGGTCTTTTAATGACAGTAAGGAAAAATGGTGGTTATTCAAGGATGGAGAAGGAAGACCCAGATGAGAAAAAGCATAGACAAGCTCAGTTCTTGATTTACAAGATAATGGAGCAAGCAAGTAATGGCAGTAAGAGAAGACCTTCATGTCTAAGAATCAGAATAAGAAAGTTTAAGTTAAGGATTGGAAGAAGGTTGAAGAAGATGAAGAAGACAATGGCAATGAGTTTTTCAACAGCAAGAATTGGAATTTGCAGCCAATTGGGACAGCTTAGAAGTTGTAAAAGTTTGTTTGGAAAAGCAAAGGTGGAAACTTTGAACTTTCCTACTGCTTTGGTTGCTTGA MGLLMTVRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKLRIGRRLKKMKKTMAMSFSTARIGICSQLGQLRSCKSLFGKAKVETLNFPTALVA Homology
BLAST of IVF0004157 vs. ExPASy TrEMBL
Match: A0A0A0LUT4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G063510 PE=4 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 2.1e-50 Identity = 105/114 (92.11%), Postives = 110/114 (96.49%), Query Frame = 0
BLAST of IVF0004157 vs. ExPASy TrEMBL
Match: A0A6J1CEK3 (uncharacterized protein LOC111010796 OS=Momordica charantia OX=3673 GN=LOC111010796 PE=4 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 9.1e-38 Identity = 84/111 (75.68%), Postives = 101/111 (90.99%), Query Frame = 0
BLAST of IVF0004157 vs. ExPASy TrEMBL
Match: A0A6J1KG77 (uncharacterized protein LOC111495486 OS=Cucurbita maxima OX=3661 GN=LOC111495486 PE=4 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 1.0e-36 Identity = 80/106 (75.47%), Postives = 92/106 (86.79%), Query Frame = 0
BLAST of IVF0004157 vs. ExPASy TrEMBL
Match: A0A5A7UTN2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005820 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 1.6e-29 Identity = 77/114 (67.54%), Postives = 78/114 (68.42%), Query Frame = 0
BLAST of IVF0004157 vs. ExPASy TrEMBL
Match: A0A540M3N5 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_021032 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 4.6e-21 Identity = 58/107 (54.21%), Postives = 82/107 (76.64%), Query Frame = 0
BLAST of IVF0004157 vs. NCBI nr
Match: KGN64527.1 (hypothetical protein Csa_013452 [Cucumis sativus]) HSP 1 Score: 207 bits (527), Expect = 5.06e-67 Identity = 105/114 (92.11%), Postives = 110/114 (96.49%), Query Frame = 0
BLAST of IVF0004157 vs. NCBI nr
Match: KAG6584084.1 (hypothetical protein SDJN03_20016, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 165 bits (418), Expect = 1.98e-50 Identity = 86/110 (78.18%), Postives = 97/110 (88.18%), Query Frame = 0
BLAST of IVF0004157 vs. NCBI nr
Match: XP_022140046.1 (uncharacterized protein LOC111010796 [Momordica charantia]) HSP 1 Score: 165 bits (417), Expect = 2.90e-50 Identity = 84/111 (75.68%), Postives = 101/111 (90.99%), Query Frame = 0
BLAST of IVF0004157 vs. NCBI nr
Match: KAG7019685.1 (hypothetical protein SDJN02_18648, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 162 bits (411), Expect = 2.31e-49 Identity = 85/110 (77.27%), Postives = 96/110 (87.27%), Query Frame = 0
BLAST of IVF0004157 vs. NCBI nr
Match: XP_023001322.1 (uncharacterized protein LOC111495486 [Cucurbita maxima]) HSP 1 Score: 162 bits (409), Expect = 4.65e-49 Identity = 84/110 (76.36%), Postives = 96/110 (87.27%), Query Frame = 0
BLAST of IVF0004157 vs. TAIR 10
Match: AT1G11655.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G21902.1); Has 22 Blast hits to 22 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 53.5 bits (127), Expect = 1.3e-07 Identity = 33/88 (37.50%), Postives = 58/88 (65.91%), Query Frame = 0
BLAST of IVF0004157 vs. TAIR 10
Match: AT4G04745.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G21902.1); Has 32 Blast hits to 32 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 53.1 bits (126), Expect = 1.7e-07 Identity = 30/67 (44.78%), Postives = 48/67 (71.64%), Query Frame = 0
BLAST of IVF0004157 vs. TAIR 10
Match: AT4G21902.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G04745.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 43.9 bits (102), Expect = 1.0e-04 Identity = 27/79 (34.18%), Postives = 53/79 (67.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|