IVF0004157 (gene) Melon (IVF77) v1

Overview
NameIVF0004157
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr12: 22223687 .. 22224031 (+)
RNA-Seq ExpressionIVF0004157
SyntenyIVF0004157
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCTTTTAATGACAGTAAGGAAAAATGGTGGTTATTCAAGGATGGAGAAGGAAGACCCAGATGAGAAAAAGCATAGACAAGCTCAGTTCTTGATTTACAAGATAATGGAGCAAGCAAGTAATGGCAGTAAGAGAAGACCTTCATGTCTAAGAATCAGAATAAGAAAGTTTAAGTTAAGGATTGGAAGAAGGTTGAAGAAGATGAAGAAGACAATGGCAATGAGTTTTTCAACAGCAAGAATTGGAATTTGCAGCCAATTGGGACAGCTTAGAAGTTGTAAAAGTTTGTTTGGAAAAGCAAAGGTGGAAACTTTGAACTTTCCTACTGCTTTGGTTGCTTGA

mRNA sequence

ATGGGTCTTTTAATGACAGTAAGGAAAAATGGTGGTTATTCAAGGATGGAGAAGGAAGACCCAGATGAGAAAAAGCATAGACAAGCTCAGTTCTTGATTTACAAGATAATGGAGCAAGCAAGTAATGGCAGTAAGAGAAGACCTTCATGTCTAAGAATCAGAATAAGAAAGTTTAAGTTAAGGATTGGAAGAAGGTTGAAGAAGATGAAGAAGACAATGGCAATGAGTTTTTCAACAGCAAGAATTGGAATTTGCAGCCAATTGGGACAGCTTAGAAGTTGTAAAAGTTTGTTTGGAAAAGCAAAGGTGGAAACTTTGAACTTTCCTACTGCTTTGGTTGCTTGA

Coding sequence (CDS)

ATGGGTCTTTTAATGACAGTAAGGAAAAATGGTGGTTATTCAAGGATGGAGAAGGAAGACCCAGATGAGAAAAAGCATAGACAAGCTCAGTTCTTGATTTACAAGATAATGGAGCAAGCAAGTAATGGCAGTAAGAGAAGACCTTCATGTCTAAGAATCAGAATAAGAAAGTTTAAGTTAAGGATTGGAAGAAGGTTGAAGAAGATGAAGAAGACAATGGCAATGAGTTTTTCAACAGCAAGAATTGGAATTTGCAGCCAATTGGGACAGCTTAGAAGTTGTAAAAGTTTGTTTGGAAAAGCAAAGGTGGAAACTTTGAACTTTCCTACTGCTTTGGTTGCTTGA

Protein sequence

MGLLMTVRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKLRIGRRLKKMKKTMAMSFSTARIGICSQLGQLRSCKSLFGKAKVETLNFPTALVA
Homology
BLAST of IVF0004157 vs. ExPASy TrEMBL
Match: A0A0A0LUT4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G063510 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.1e-50
Identity = 105/114 (92.11%), Postives = 110/114 (96.49%), Query Frame = 0

Query: 1   MGLLMTVRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKL 60
           M +LMTVR+NGGYS+MEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKL
Sbjct: 1   MSVLMTVRRNGGYSKMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKL 60

Query: 61  RIGRRLKKMKKTMAMSFSTARIGICSQLGQLRSCKSLFGKAKVETLNFPTALVA 115
           R+GRR KKMKKTMAMSFSTARIGIC+Q GQLRSCKSLFGK KVETLNFPTALVA
Sbjct: 61  RMGRRWKKMKKTMAMSFSTARIGICNQFGQLRSCKSLFGKTKVETLNFPTALVA 114

BLAST of IVF0004157 vs. ExPASy TrEMBL
Match: A0A6J1CEK3 (uncharacterized protein LOC111010796 OS=Momordica charantia OX=3673 GN=LOC111010796 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 9.1e-38
Identity = 84/111 (75.68%), Postives = 101/111 (90.99%), Query Frame = 0

Query: 1   MGLLMTVRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKL 60
           M +++T RK  GYSRMEKEDP+EKKHR+AQFLIYKIMEQA++GS+RRP+CLRIRIRKFKL
Sbjct: 1   MSVILT-RKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKL 60

Query: 61  RIGRRLKKMKKTMAMSFSTARIGICSQLGQLRSCKSLFGKA-KVETLNFPT 111
           RIGRRLKK++K+M+ S STARIGIC Q+GQLR+CKSLFG+  KVETL FP+
Sbjct: 61  RIGRRLKKLRKSMSASLSTARIGICKQIGQLRTCKSLFGRGRKVETLAFPS 110

BLAST of IVF0004157 vs. ExPASy TrEMBL
Match: A0A6J1KG77 (uncharacterized protein LOC111495486 OS=Cucurbita maxima OX=3661 GN=LOC111495486 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 1.0e-36
Identity = 80/106 (75.47%), Postives = 92/106 (86.79%), Query Frame = 0

Query: 5   MTVRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKLRIGR 64
           +  R+  GYSRMEKEDP+EKKHRQAQFLIYKIMEQA++G++RR SCLRIRIRKFKLRIGR
Sbjct: 4   LVTRRQNGYSRMEKEDPEEKKHRQAQFLIYKIMEQANSGTRRRSSCLRIRIRKFKLRIGR 63

Query: 65  RLKKMKKTMAMSFSTARIGICSQLGQLRSCKSLFGKAKVETLNFPT 111
           RLKK+KKTM+M F TAR GIC Q GQLR+CKSLFG+ K E L FP+
Sbjct: 64  RLKKLKKTMSMGFCTARNGICKQFGQLRTCKSLFGRPKEEALAFPS 109

BLAST of IVF0004157 vs. ExPASy TrEMBL
Match: A0A5A7UTN2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005820 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.6e-29
Identity = 77/114 (67.54%), Postives = 78/114 (68.42%), Query Frame = 0

Query: 1   MGLLMTVRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKL 60
           MGLLMTVRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQASNG+                
Sbjct: 1   MGLLMTVRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQASNGT---------------- 60

Query: 61  RIGRRLKKMKKTMAMSFSTARIGICSQLGQLRSCKSLFGKAKVETLNFPTALVA 115
                               RIGICSQLGQLRSCKSLFGKAKVETLNFPTALVA
Sbjct: 61  --------------------RIGICSQLGQLRSCKSLFGKAKVETLNFPTALVA 78

BLAST of IVF0004157 vs. ExPASy TrEMBL
Match: A0A540M3N5 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_021032 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 4.6e-21
Identity = 58/107 (54.21%), Postives = 82/107 (76.64%), Query Frame = 0

Query: 3   LLMTVRKN-GGYSRMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKLR 62
           + MT+RK+ G YS+M+KEDP+E  HR+AQFLIYK+M+Q     +RRPS LRIR+RK KL+
Sbjct: 1   MAMTIRKSYGAYSKMDKEDPEEVNHRRAQFLIYKVMQQVE--MRRRPSNLRIRVRKLKLK 60

Query: 63  IGRRLKKMKKTMAMSFSTARIGICSQL-GQLRSCKSLFGKAKVETLN 108
           IGRRLKK++K+M +S S AR+ +  Q+  QL++CK+LFG+     +N
Sbjct: 61  IGRRLKKLRKSMLLSISAARVCVYKQVFNQLKTCKTLFGRGDQGNIN 105

BLAST of IVF0004157 vs. NCBI nr
Match: KGN64527.1 (hypothetical protein Csa_013452 [Cucumis sativus])

HSP 1 Score: 207 bits (527), Expect = 5.06e-67
Identity = 105/114 (92.11%), Postives = 110/114 (96.49%), Query Frame = 0

Query: 1   MGLLMTVRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKL 60
           M +LMTVR+NGGYS+MEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKL
Sbjct: 1   MSVLMTVRRNGGYSKMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKL 60

Query: 61  RIGRRLKKMKKTMAMSFSTARIGICSQLGQLRSCKSLFGKAKVETLNFPTALVA 114
           R+GRR KKMKKTMAMSFSTARIGIC+Q GQLRSCKSLFGK KVETLNFPTALVA
Sbjct: 61  RMGRRWKKMKKTMAMSFSTARIGICNQFGQLRSCKSLFGKTKVETLNFPTALVA 114

BLAST of IVF0004157 vs. NCBI nr
Match: KAG6584084.1 (hypothetical protein SDJN03_20016, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 165 bits (418), Expect = 1.98e-50
Identity = 86/110 (78.18%), Postives = 97/110 (88.18%), Query Frame = 0

Query: 1   MGLLMTVRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKL 60
           M  L+T R+NG YSRMEKEDP+EKKHRQAQFLIYKIMEQA++GS+RR SCLRIRIRKFKL
Sbjct: 1   MSGLVTRRQNG-YSRMEKEDPEEKKHRQAQFLIYKIMEQANSGSRRRSSCLRIRIRKFKL 60

Query: 61  RIGRRLKKMKKTMAMSFSTARIGICSQLGQLRSCKSLFGKAKVETLNFPT 110
           RIGRRLKK+KKTM+M   TARIGIC Q GQLR+CKSLFG+AK E L FP+
Sbjct: 61  RIGRRLKKLKKTMSMGICTARIGICKQFGQLRTCKSLFGRAKEEALAFPS 109

BLAST of IVF0004157 vs. NCBI nr
Match: XP_022140046.1 (uncharacterized protein LOC111010796 [Momordica charantia])

HSP 1 Score: 165 bits (417), Expect = 2.90e-50
Identity = 84/111 (75.68%), Postives = 101/111 (90.99%), Query Frame = 0

Query: 1   MGLLMTVRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKL 60
           M +++T RK  GYSRMEKEDP+EKKHR+AQFLIYKIMEQA++GS+RRP+CLRIRIRKFKL
Sbjct: 1   MSVILT-RKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKL 60

Query: 61  RIGRRLKKMKKTMAMSFSTARIGICSQLGQLRSCKSLFGKA-KVETLNFPT 110
           RIGRRLKK++K+M+ S STARIGIC Q+GQLR+CKSLFG+  KVETL FP+
Sbjct: 61  RIGRRLKKLRKSMSASLSTARIGICKQIGQLRTCKSLFGRGRKVETLAFPS 110

BLAST of IVF0004157 vs. NCBI nr
Match: KAG7019685.1 (hypothetical protein SDJN02_18648, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 162 bits (411), Expect = 2.31e-49
Identity = 85/110 (77.27%), Postives = 96/110 (87.27%), Query Frame = 0

Query: 1   MGLLMTVRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKL 60
           M  L+T R+NG YSRMEKEDP+EKKHRQAQFLIYKIMEQA++GS+RR SCLRIRIRKFKL
Sbjct: 1   MSGLVTRRQNG-YSRMEKEDPEEKKHRQAQFLIYKIMEQANSGSRRRSSCLRIRIRKFKL 60

Query: 61  RIGRRLKKMKKTMAMSFSTARIGICSQLGQLRSCKSLFGKAKVETLNFPT 110
           RIGRRLKK+KKTM+M   TAR GIC Q GQLR+CKSLFG+AK E L FP+
Sbjct: 61  RIGRRLKKLKKTMSMGICTARNGICKQFGQLRTCKSLFGRAKEEALAFPS 109

BLAST of IVF0004157 vs. NCBI nr
Match: XP_023001322.1 (uncharacterized protein LOC111495486 [Cucurbita maxima])

HSP 1 Score: 162 bits (409), Expect = 4.65e-49
Identity = 84/110 (76.36%), Postives = 96/110 (87.27%), Query Frame = 0

Query: 1   MGLLMTVRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKL 60
           M  L+T R+NG YSRMEKEDP+EKKHRQAQFLIYKIMEQA++G++RR SCLRIRIRKFKL
Sbjct: 1   MSGLVTRRQNG-YSRMEKEDPEEKKHRQAQFLIYKIMEQANSGTRRRSSCLRIRIRKFKL 60

Query: 61  RIGRRLKKMKKTMAMSFSTARIGICSQLGQLRSCKSLFGKAKVETLNFPT 110
           RIGRRLKK+KKTM+M F TAR GIC Q GQLR+CKSLFG+ K E L FP+
Sbjct: 61  RIGRRLKKLKKTMSMGFCTARNGICKQFGQLRTCKSLFGRPKEEALAFPS 109

BLAST of IVF0004157 vs. TAIR 10
Match: AT1G11655.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G21902.1); Has 22 Blast hits to 22 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 53.5 bits (127), Expect = 1.3e-07
Identity = 33/88 (37.50%), Postives = 58/88 (65.91%), Query Frame = 0

Query: 13 YSRMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRP--SCLRIRIRKFKLRIGRRLKKMK 72
          YS+M+KEDP+E   R+A+FLIYK +++A   S+R P  S +R+++   K++IG+RL K++
Sbjct: 10 YSKMDKEDPEEVLSRRAKFLIYKTLQEADLISRRDPHSSFIRLKLYLLKVKIGKRLAKLR 69

Query: 73 KTMAMSFSTARIGICSQLGQLRSCKSLF 99
          +++  +     I   S  G +R+ K +F
Sbjct: 70 RSVVSAVRFGGIRKHSHNG-VRALKKMF 96

BLAST of IVF0004157 vs. TAIR 10
Match: AT4G04745.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G21902.1); Has 32 Blast hits to 32 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 53.1 bits (126), Expect = 1.7e-07
Identity = 30/67 (44.78%), Postives = 48/67 (71.64%), Query Frame = 0

Query: 13  YSRMEKEDPDEKKHRQAQFLIYKIMEQASNGS-----KRRPS--CLRIRIRKFKLRIGRR 72
           Y++MEKEDP E  HR+AQFLI K++E+A + +     +RR S   + IR+   ++RIG++
Sbjct: 37  YTKMEKEDPQELIHRRAQFLIQKVLERADSKTRQHQQRRRSSGPLIMIRVVGIRMRIGKK 96

BLAST of IVF0004157 vs. TAIR 10
Match: AT4G21902.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G04745.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 43.9 bits (102), Expect = 1.0e-04
Identity = 27/79 (34.18%), Postives = 53/79 (67.09%), Query Frame = 0

Query: 5  MTVRKN-GGYSRMEKEDPDEKKHRQAQFLIYKIMEQAS----NGSKRRPSCLRI---RIR 64
          M + KN   Y+++EKED +E  HR+AQFLI+KI+++A        ++R + +++   R+ 
Sbjct: 1  MAMMKNPNQYTKIEKEDLNEIIHRRAQFLIHKILQRADIETLRQQQKRNTTIKLFSFRVV 60

Query: 65 KFKLRIGRRLKKMKKTMAM 76
            +++IG++L+K++K+  M
Sbjct: 61 GIRMKIGKKLRKLRKSCVM 79

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LUT42.1e-5092.11Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G063510 PE=4 SV=1[more]
A0A6J1CEK39.1e-3875.68uncharacterized protein LOC111010796 OS=Momordica charantia OX=3673 GN=LOC111010... [more]
A0A6J1KG771.0e-3675.47uncharacterized protein LOC111495486 OS=Cucurbita maxima OX=3661 GN=LOC111495486... [more]
A0A5A7UTN21.6e-2967.54Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A540M3N54.6e-2154.21Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_021032 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KGN64527.15.06e-6792.11hypothetical protein Csa_013452 [Cucumis sativus][more]
KAG6584084.11.98e-5078.18hypothetical protein SDJN03_20016, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022140046.12.90e-5075.68uncharacterized protein LOC111010796 [Momordica charantia][more]
KAG7019685.12.31e-4977.27hypothetical protein SDJN02_18648, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_023001322.14.65e-4976.36uncharacterized protein LOC111495486 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT1G11655.11.3e-0737.50unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G04745.11.7e-0744.78unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G21902.11.0e-0434.18unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availablePANTHERPTHR35687OS07G0516700 PROTEINcoord: 5..103
NoneNo IPR availablePANTHERPTHR35687:SF1OS07G0516700 PROTEINcoord: 5..103

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0004157.1IVF0004157.1mRNA