IVF0004115 (gene) Melon (IVF77) v1

Overview


Name	IVF0004115
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	GRAS family transcription factor
Location	chr08: 4084847 .. 4086317 (-)
RNA-Seq Expression	IVF0004115
Synteny	IVF0004115

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATACCTTGTTTCGGCTTGTTAATCTTCAATCTGATCAACAATCTTACAATTCCAGTAGGAGTACTAATTCAAGCAGTTCTAGATCTTCTAGACAAAACCAATACCATCATTACCATCAACAAGAAGACGAAGAATGCTACAATCTTCTCATGGATGACGAAGATTTCTCATCGTCTAGTAATTCTAGACAATATTATAATAATAATCCATACCATCCTCCTCATCCATCTTCTACCACTACCCCAACTCCTCCGCTCGATCAATTCTCATTCCTTTCACCTTCACCGGATTTCAACTTCGAATTTTCCGGTAGGTGGGCCCCTGATATTCTCCTTGAAACTGCCAGGGCTATTTCTGACAGGAACAGCGCTCGCGTTCAGCAACTCATGTGGATGCTAAACGAACTCAGCTCTCCCTATGGAGATACGGATCAAAAGCTAGCTGCCTATTTTCTGCAAGCCTTGTTTAGCCGTATGACTGATTCCGGCGACCGTAATTACCGCGCTTTGGCATCTGCTTCTGAGAAAACGTGTTCATTCGAATCAACTAGGAAAGTGATGCTCAAGTTCCAGGAGGTTAGCCCTTGGACCACTTTTGGCCATGTTTCTTGCAATGGCGCATTAATTGAAGCTTTAGAAGGCGAATCGAAGCTACATATAATCGATATTAGCAATACCTATTGTACGCAGTGGCCTACTTTGCTTGAAGCTCTAGCTACTCGCACCGACGATACGCCACACCTCCGTCTCACGACGGTGGTTACCACCAAGCCGAGCGGTGGAACCGGAACTGCGGCTTCTCAAAAAGTAATGAAGAAATTGGTACAAGAATGGAAAAGTTCGCTAGGCTTATGGGCGTACCTTTTAAATTCAATGCGCTTTACCATTCTGGTGATCTTTCGGAATTGGACATGGCGAAATTAGATATTAAAGAAGACGAGGCACTTGCGATTAACTGCGTCGGAGCTTTACGTTCTGTGGCGGCGATTAACAACCGTCGAGATTTCTTGATTTCGTCTTTCCGTAGTTTACGGCCGCGGATCATCACGGTGATTGAAGAGGAAGCGGATCTCGACGTTGGGGTTGATGGAATTGAATTATGAGAGGTTTTCAAGAATGTTTGCGGTGGTTTAGGGTTTACTTCGAGACATTGGACGAGAGTTTCTCGAGGACGAGTAATGAGCGGTTGATGCTCGAGAGAGCGGCCGGTAGGGCAATCGTGGACCTAGTGGCTTGTTCGGCGGCGGAATCGGTTGAGAGGCGGGAAACGGCGTCGCGGTGGGCTCAGCGGCTGCATGGAAATGGATTTGGTCCAGTGACGTTCAGCGACGAAGTGTGCGACGACGTTAGGGCGTTGTTGAGGAGATACAAGGAAGGATGGGCAATGACACAGAGCTCGGACGTCGCCGGAATATTCTTGACGTGGAAAGAGCAGCCGGTGGTGTGGGCCAGTGCATGGAGACCTTGA

mRNA sequence

ATGGATACCTTGTTTCGGCTTGTTAATCTTCAATCTGATCAACAATCTTACAATTCCAGTAGGAGTACTAATTCAAGCAGTTCTAGATCTTCTAGACAAAACCAATACCATCATTACCATCAACAAGAAGACGAAGAATGCTACAATCTTCTCATGGATGACGAAGATTTCTCATCGTCTAGTAATTCTAGACAATATTATAATAATAATCCATACCATCCTCCTCATCCATCTTCTACCACTACCCCAACTCCTCCGCTCGATCAATTCTCATTCCTTTCACCTTCACCGGATTTCAACTTCGAATTTTCCGGTAGGTGGGCCCCTGATATTCTCCTTGAAACTGCCAGGGCTATTTCTGACAGGAACAGCGCTCGCGTTCAGCAACTCATGTGGATGCTAAACGAACTCAGCTCTCCCTATGGAGATACGGATCAAAAGCTAGCTGCCTATTTTCTGCAAGCCTTGTTTAGCCGTATGACTGATTCCGGCGACCGTAATTACCGCGCTTTGGCATCTGCTTCTGAGAAAACGTGTTCATTCGAATCAACTAGGAAAGTGATGCTCAAGTTCCAGGAGGTTAGCCCTTGGACCACTTTTGGCCATGTTTCTTGCAATGGCGCATTAATTGAAGCTTTAGAAGGCGAATCGAAGCTACATATAATCGATATTAGCAATACCTATTGTACGCAGTGGCCTACTTTGCTTGAAGCTCTAGCTACTCGCACCGACGATACGCCACACCTCCGTCTCACGACGGTGGTTACCACCAAGCCGAGCGAAATTGGTACAAGAATGGAAAAGTTCGCTAGGCTTATGGGCGTACCTTTTAAATTCAATGCGCTTTACCATTCTGGTGATCTTTCGGAATTGGACATGGCGAAATTAGATATTAAAGAAGACGAGGCACTTGCGATTAACTGCGTCGGAGCTTTACGTTCTGTGGCGGCGATTAACAACCGTCGAGATTTCTTGATTTCGTCTTTCCGTAGTTTACGGCCGCGGATCATCACGGTGATTGAAGAGGAAGCGGATCTCGACACATTGGACGAGAGTTTCTCGAGGACGAGTAATGAGCGGTTGATGCTCGAGAGAGCGGCCGGTAGGGCAATCGTGGACCTAGTGGCTTGTTCGGCGGCGGAATCGGTTGAGAGGCGGGAAACGGCGTCGCGGTGGGCTCAGCGGCTGCATGGAAATGGATTTGGTCCAGTGACGTTCAGCGACGAAGTGTGCGACGACGTTAGGGCGTTGTTGAGGAGATACAAGGAAGGATGGGCAATGACACAGAGCTCGGACGTCGCCGGAATATTCTTGACGTGGAAAGAGCAGCCGGTGGTGTGGGCCAGTGCATGGAGACCTTGA

Coding sequence (CDS)

ATGGATACCTTGTTTCGGCTTGTTAATCTTCAATCTGATCAACAATCTTACAATTCCAGTAGGAGTACTAATTCAAGCAGTTCTAGATCTTCTAGACAAAACCAATACCATCATTACCATCAACAAGAAGACGAAGAATGCTACAATCTTCTCATGGATGACGAAGATTTCTCATCGTCTAGTAATTCTAGACAATATTATAATAATAATCCATACCATCCTCCTCATCCATCTTCTACCACTACCCCAACTCCTCCGCTCGATCAATTCTCATTCCTTTCACCTTCACCGGATTTCAACTTCGAATTTTCCGGTAGGTGGGCCCCTGATATTCTCCTTGAAACTGCCAGGGCTATTTCTGACAGGAACAGCGCTCGCGTTCAGCAACTCATGTGGATGCTAAACGAACTCAGCTCTCCCTATGGAGATACGGATCAAAAGCTAGCTGCCTATTTTCTGCAAGCCTTGTTTAGCCGTATGACTGATTCCGGCGACCGTAATTACCGCGCTTTGGCATCTGCTTCTGAGAAAACGTGTTCATTCGAATCAACTAGGAAAGTGATGCTCAAGTTCCAGGAGGTTAGCCCTTGGACCACTTTTGGCCATGTTTCTTGCAATGGCGCATTAATTGAAGCTTTAGAAGGCGAATCGAAGCTACATATAATCGATATTAGCAATACCTATTGTACGCAGTGGCCTACTTTGCTTGAAGCTCTAGCTACTCGCACCGACGATACGCCACACCTCCGTCTCACGACGGTGGTTACCACCAAGCCGAGCGAAATTGGTACAAGAATGGAAAAGTTCGCTAGGCTTATGGGCGTACCTTTTAAATTCAATGCGCTTTACCATTCTGGTGATCTTTCGGAATTGGACATGGCGAAATTAGATATTAAAGAAGACGAGGCACTTGCGATTAACTGCGTCGGAGCTTTACGTTCTGTGGCGGCGATTAACAACCGTCGAGATTTCTTGATTTCGTCTTTCCGTAGTTTACGGCCGCGGATCATCACGGTGATTGAAGAGGAAGCGGATCTCGACACATTGGACGAGAGTTTCTCGAGGACGAGTAATGAGCGGTTGATGCTCGAGAGAGCGGCCGGTAGGGCAATCGTGGACCTAGTGGCTTGTTCGGCGGCGGAATCGGTTGAGAGGCGGGAAACGGCGTCGCGGTGGGCTCAGCGGCTGCATGGAAATGGATTTGGTCCAGTGACGTTCAGCGACGAAGTGTGCGACGACGTTAGGGCGTTGTTGAGGAGATACAAGGAAGGATGGGCAATGACACAGAGCTCGGACGTCGCCGGAATATTCTTGACGTGGAAAGAGCAGCCGGTGGTGTGGGCCAGTGCATGGAGACCTTGA

Protein sequence

MDTLFRLVNLQSDQQSYNSSRSTNSSSSRSSRQNQYHHYHQQEDEECYNLLMDDEDFSSSSNSRQYYNNNPYHPPHPSSTTTPTPPLDQFSFLSPSPDFNFEFSGRWAPDILLETARAISDRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRALASASEKTCSFESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIIDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTTKPSEIGTRMEKFARLMGVPFKFNALYHSGDLSELDMAKLDIKEDEALAINCVGALRSVAAINNRRDFLISSFRSLRPRIITVIEEEADLDTLDESFSRTSNERLMLERAAGRAIVDLVACSAAESVERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAGIFLTWKEQPVVWASAWRP

Homology

[Close]

BLAST of IVF0004115 vs. ExPASy Swiss-Prot
Match: Q9SZF7 (Protein SHORT-ROOT OS=Arabidopsis thaliana OX=3702 GN=SHR PE=1 SV=1)

HSP 1 Score: 548.1 bits (1411), Expect = 9.2e-155
Identity = 299/530 (56.42%), Postives = 370/530 (69.81%), Query Frame = 0


Query: 1   MDTLFRLVNLQSDQQS-----YNSSRSTNSSSSRSSRQNQYHHYHQQED--EECYNLLMD 60
           MDTLFRLV+LQ  QQS       SS S  S+++  S Q  YH+   Q D  EEC+N  MD
Sbjct: 1   MDTLFRLVSLQQQQQSDSIITNQSSLSRTSTTTTGSPQTAYHYNFPQNDVVEECFNFFMD 60

Query: 61  DEDFSSSSNSRQYYN-NNP--YHPP-------HPSSTTTPTPPLDQFSFLSP-------- 120
           +ED SSSS+   ++N NNP  Y+ P       HP++++TP+      +  SP        
Sbjct: 61  EEDLSSSSSHHNHHNHNNPNTYYSPFTTPTQYHPATSSTPSSTAAAAALASPYSSSGHHN 120

Query: 121 ----------SPDFNFEFSGRWAPDILLETARAISDRNSARVQQLMWMLNELSSPYGDTD 180
                      P F+F  + +WA  +LLE ARA SD+++AR QQ++W LNELSSPYGDT+
Sbjct: 121 DPSAFSIPQTPPSFDFSANAKWADSVLLEAARAFSDKDTARAQQILWTLNELSSPYGDTE 180

Query: 181 QKLAAYFLQALFSRMTDSGDRNYRAL--ASASEKTCSFESTRKVMLKFQEVSPWTTFGHV 240
           QKLA+YFLQALF+RMT SG+R YR +  A+A+EKTCSFESTRK +LKFQEVSPW TFGHV
Sbjct: 181 QKLASYFLQALFNRMTGSGERCYRTMVTAAATEKTCSFESTRKTVLKFQEVSPWATFGHV 240

Query: 241 SCNGALIEALEGESKLHIIDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTTKP---- 300
           + NGA++EA++GE+K+HI+DIS+T+CTQWPTLLEALATR+DDTPHLRLTTVV        
Sbjct: 241 AANGAILEAVDGEAKIHIVDISSTFCTQWPTLLEALATRSDDTPHLRLTTVVVANKFVND 300

Query: 301 --------SEIGTRMEKFARLMGVPFKFNALYHSGDLSELDMAKLDIKEDEALAINCVGA 360
                    EIG RMEKFARLMGVPFKFN ++H GDLSE D+ +LD+K DE LAINCVGA
Sbjct: 301 QTASHRMMKEIGNRMEKFARLMGVPFKFNIIHHVGDLSEFDLNELDVKPDEVLAINCVGA 360

Query: 361 LRSVAAINNRRDFLISSFRSLRPRIITVIEEEADL------------------------- 420
           +  +A+  + RD +ISSFR LRPRI+TV+EEEADL                         
Sbjct: 361 MHGIASRGSPRDAVISSFRRLRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGECLRWFRV 420

Query: 421 --DTLDESFSRTSNERLMLERAAGRAIVDLVACSAAESVERRETASRWAQRLHGNGFGPV 454
             ++ +ESF RTSNERLMLERAAGRAIVDLVAC  ++S ERRETA +W++R+  +GFG V
Sbjct: 421 CFESWEESFPRTSNERLMLERAAGRAIVDLVACEPSDSTERRETARKWSRRMRNSGFGAV 480

[Close]

BLAST of IVF0004115 vs. ExPASy Swiss-Prot
Match: A2YN56 (Protein SHORT-ROOT 1 OS=Oryza sativa subsp. indica OX=39946 GN=SHR1 PE=3 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 1.0e-129
Identity = 292/603 (48.42%), Postives = 362/603 (60.03%), Query Frame = 0


Query: 1   MDTLFRLVNLQ--SDQQ-------SYNSSRSTNSSSSRSSRQ------NQYHH------- 60
           MDTLFRLV+LQ  S+QQ       SYN SRST SS SRSS        + YHH       
Sbjct: 1   MDTLFRLVSLQAASEQQQQQQQSASYN-SRSTTSSGSRSSSHQTNASYSYYHHSSNSGGG 60

Query: 61  --------------------YHQQEDEECYNL----LMDDEDFSSSSNSRQYYNNNPYHP 120
                               Y +   EEC N     L  DEDFSSSS+SR +++  P   
Sbjct: 61  GGGGGGYYYGGQQPPPSQYYYLEPYQEECGNAPHHQLYMDEDFSSSSSSRHFHHGAPVQQ 120

Query: 121 PHP--SST---TTPTPPLDQFSF-------------LSPSPDFNFEFS------------ 180
             P  SST   T PTPPL   S              LS  PD N +FS            
Sbjct: 121 QQPPASSTPTGTAPTPPLSTSSTAAGAGHGLFEAADLSFPPDLNLDFSSPASSSGGGTAS 180

Query: 181 ---------GRWAPDILLETARAISDRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQA 240
                    GRWA  +LLE AR+++ R+S RVQQLMWMLNEL+SPYGD +QKLA+YFLQ 
Sbjct: 181 SGAVGGGGGGRWASQLLLECARSVAARDSQRVQQLMWMLNELASPYGDVEQKLASYFLQG 240

Query: 241 LFSRMTDSGDRNYRALASASEKTCSFESTRKVMLKFQEVSPWTTFGHVSCNGALIE---- 300
           LF+R+T SG R  R LA+AS++  SF+STR+  L+FQE+SPW++FGHV+ NGA++E    
Sbjct: 241 LFARLTASGQRTLRTLAAASDRNTSFDSTRRTALRFQELSPWSSFGHVAANGAILESFLE 300

Query: 301 ----ALEGESKLHIIDISNTYCTQWPTLLEALATRT-DDTPHLRLTTVVTTKPS------ 360
               A     + HI+D+SNT+CTQWPTLLEALATR+ D+TPHL +TTVV+  PS      
Sbjct: 301 VAAAASSETQRFHILDLSNTFCTQWPTLLEALATRSADETPHLSITTVVSAAPSAPTAAV 360

Query: 361 -----EIGTRMEKFARLMGVPFKFNALYHSGDLSELDMAKLDIKE---DEALAINCVGAL 420
                EIG RMEKFARLMGVPF+F A++HSGDL+ELD+  LD++E     ALA+NCV +L
Sbjct: 361 QRVMREIGQRMEKFARLMGVPFRFRAVHHSGDLAELDLDALDLREGGATTALAVNCVNSL 420

Query: 421 RSVA-AINNRRDFLISSFRSLRPRIITVIEEEADL------------------------- 454
           R V      RRD   +S R L PR++TV+EEEADL                         
Sbjct: 421 RGVVPGRARRRDAFAASLRRLDPRVVTVVEEEADLVASDPDASSATEEGGDTEAAFLKVF 480

[Close]

BLAST of IVF0004115 vs. ExPASy Swiss-Prot
Match: Q8H2X8 (Protein SHORT-ROOT 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SHR1 PE=1 SV=2)

HSP 1 Score: 461.1 bits (1185), Expect = 1.5e-128
Identity = 290/603 (48.09%), Postives = 361/603 (59.87%), Query Frame = 0


Query: 1   MDTLFRLVNLQ--SDQQ-------SYNSSRSTNSSSSRSSRQ------NQYHH------- 60
           MDTLFRLV+LQ  S+QQ       SYN SRST SS SRSS        + YHH       
Sbjct: 1   MDTLFRLVSLQAASEQQQQQQQSASYN-SRSTTSSGSRSSSHQTNASYSYYHHSSNSGGG 60

Query: 61  --------------------YHQQEDEECYNL----LMDDEDFSSSSNSRQYYNN---NP 120
                               Y +   EEC N     L  DEDFSSSS+SR +++      
Sbjct: 61  GGGGGGYYYGGQQPPPSQYYYLEPYQEECGNAPHHQLYMDEDFSSSSSSRHFHHGARVQQ 120

Query: 121 YHPPHPSST--TTPTPPLDQFSF-------------LSPSPDFNFEFS------------ 180
             PP  S+   T PTPPL   S              LS  PD N +FS            
Sbjct: 121 QQPPASSTPTGTAPTPPLSTSSTAAGAGHGLFEAADLSFPPDLNLDFSSPASSSGGGTAS 180

Query: 181 ---------GRWAPDILLETARAISDRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQA 240
                    GRWA  +LLE AR+++ R+S RVQQLMWMLNEL+SPYGD +QKLA+YFLQ 
Sbjct: 181 SGAVGGGGGGRWASQLLLECARSVAARDSQRVQQLMWMLNELASPYGDVEQKLASYFLQG 240

Query: 241 LFSRMTDSGDRNYRALASASEKTCSFESTRKVMLKFQEVSPWTTFGHVSCNGALIE---- 300
           LF+R+T SG R  R LA+AS++  SF+STR+  L+FQE+SPW++FGHV+ NGA++E    
Sbjct: 241 LFARLTASGPRTLRTLAAASDRNTSFDSTRRTALRFQELSPWSSFGHVAANGAILESFLE 300

Query: 301 ----ALEGESKLHIIDISNTYCTQWPTLLEALATRT-DDTPHLRLTTVVTTKPS------ 360
               A     + HI+D+SNT+CTQWPTLLEALATR+ D+TPHL +TTVV+  PS      
Sbjct: 301 VAAAASSETQRFHILDLSNTFCTQWPTLLEALATRSADETPHLSITTVVSAAPSAPTAAV 360

Query: 361 -----EIGTRMEKFARLMGVPFKFNALYHSGDLSELDMAKLDIKE---DEALAINCVGAL 420
                EIG RMEKFARLMGVPF+F A++HSGDL+ELD+  LD++E     ALA+NCV +L
Sbjct: 361 QRVMREIGQRMEKFARLMGVPFRFRAVHHSGDLAELDLDALDLREGGATTALAVNCVNSL 420

Query: 421 RSVA-AINNRRDFLISSFRSLRPRIITVIEEEADL------------------------- 454
           R V      RRD   +S R L PR++TV+EEEADL                         
Sbjct: 421 RGVVPGRARRRDAFAASLRRLDPRVVTVVEEEADLVASDPDASSATEEGGDTEAAFLKVF 480

[Close]

BLAST of IVF0004115 vs. ExPASy Swiss-Prot
Match: Q75I13 (Protein SHORT-ROOT 2 OS=Oryza sativa subsp. japonica OX=39947 GN=SHR2 PE=1 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 7.6e-125
Identity = 283/606 (46.70%), Postives = 357/606 (58.91%), Query Frame = 0


Query: 1   MDTLFRLVNL---------------QSDQQSYNSSR-STNSSSSRSSRQNQYHH------ 60
           MDTLFRLV+L                   +SY SSR ST+S SS  +  + Y+H      
Sbjct: 1   MDTLFRLVSLHHHHHHQHAASPSPPDQPHKSYPSSRGSTSSPSSHHTHNHTYYHHSHSHY 60

Query: 61  --------------------YHQQED------EECYN--LLMDDEDFSSSSNSRQYYN-- 120
                               Y+ +E       EEC N      DEDFSSSS+SRQ+++  
Sbjct: 61  NNNSNTNYYYQGGGGGGGGYYYAEEQQPAAYLEECGNGHQFYMDEDFSSSSSSRQFHSGT 120

Query: 121 ---NNPYHPPHPSSTTTPTPPLDQF---SFLSPSPDFNFEF------------------- 180
              ++   PP PS+TT+       F    F  P  D + +F                   
Sbjct: 121 GAPSSAPVPPPPSATTSSAGGHGLFEAADFSFPQVDISLDFGGSPAVPSSSGAGAGAGAA 180

Query: 181 ---SGRWAPDILLETARAISDRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRM 240
              SGRWA  +L+E ARA++ R+S RVQQLMWMLNEL+SPYGD DQKLA+YFLQ LF+R+
Sbjct: 181 PSSSGRWAAQLLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARL 240

Query: 241 TDSGDRNYRALASASEKTCSFESTRKVMLKFQEVSPWTTFGHVSCNGALIEA-LEG---- 300
           T SG R  R LA+AS++  SF+STR+  LKFQE+SPWT FGHV+ NGA++E+ LE     
Sbjct: 241 TTSGPRTLRTLATASDRNASFDSTRRTALKFQELSPWTPFGHVAANGAILESFLEAAAAG 300

Query: 301 --------------ESKLHIIDISNTYCTQWPTLLEALATR-TDDTPHLRLTTVV-TTKP 360
                          ++LHI+D+SNT+CTQWPTLLEALATR +DDTPHL +TTVV T  P
Sbjct: 301 AAASSSSSSSSSTPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSITTVVPTAAP 360

Query: 361 S--------EIGTRMEKFARLMGVPFKFNALYHSGDLSELDMAKLDIKE---DEALAINC 420
           S        EIG R+EKFARLMGVPF F A++HSGDL++LD+A LD++E     ALA+NC
Sbjct: 361 SAAAQRVMREIGQRLEKFARLMGVPFSFRAVHHSGDLADLDLAALDLREGGATAALAVNC 420

Query: 421 VGALRSVAAINNRRDFLISSFRSLRPRIITVIEEEADL---------------------- 454
           V ALR VA     RD  ++S R L PR++TV+EEEADL                      
Sbjct: 421 VNALRGVA---RGRDAFVASLRRLEPRVVTVVEEEADLAAPEADASSEADTDAAFVKVFG 480

[Close]

BLAST of IVF0004115 vs. ExPASy Swiss-Prot
Match: A2XIA8 (Protein SHORT-ROOT 2 OS=Oryza sativa subsp. indica OX=39946 GN=SHR2 PE=3 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 1.7e-124
Identity = 282/606 (46.53%), Postives = 357/606 (58.91%), Query Frame = 0


Query: 1   MDTLFRLVNL---------------QSDQQSYNSSR-STNSSSSRSSRQNQYHH------ 60
           MDTLFRLV+L                   +SY SSR ST+S SS  +  + Y+H      
Sbjct: 1   MDTLFRLVSLHHHHHHQHAASPSPPDQPHKSYPSSRGSTSSPSSHHTHNHTYYHHSHSHY 60

Query: 61  --------------------YHQQED------EECYN--LLMDDEDFSSSSNSRQYYN-- 120
                               Y+ +E       EEC N      DEDFSSSS+SRQ+++  
Sbjct: 61  NNNSNTNYYYQGGGGGGGGYYYAEEQQPAAYLEECGNGHQFYMDEDFSSSSSSRQFHSGT 120

Query: 121 ---NNPYHPPHPSSTTTPTPPLDQF---SFLSPSPDFNFEF------------------- 180
              ++   PP PS+TT+       F    F  P  D + +F                   
Sbjct: 121 GAPSSAPVPPPPSATTSSAGGHGLFEAADFSFPQVDISLDFGGSPAVPSSSGAGAGAGAA 180

Query: 181 ---SGRWAPDILLETARAISDRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRM 240
              SGRWA  +L+E ARA++ R+S RVQQLMWMLNEL+SPYGD DQKLA+YFLQ LF+R+
Sbjct: 181 PSSSGRWAAQLLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARL 240

Query: 241 TDSGDRNYRALASASEKTCSFESTRKVMLKFQEVSPWTTFGHVSCNGALIEA-LEG---- 300
           T SG R  R LA+AS++  SF+STR+  LKFQE+SPWT FGHV+ NGA++E+ LE     
Sbjct: 241 TTSGPRTLRTLATASDRNASFDSTRRTALKFQELSPWTPFGHVAANGAILESFLEAAAAG 300

Query: 301 --------------ESKLHIIDISNTYCTQWPTLLEALATR-TDDTPHLRLTTVV-TTKP 360
                          ++LHI+D+SNT+CTQWPTLLEALATR +DDTPHL +TTVV T  P
Sbjct: 301 AAAASSSSSSSSTPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSITTVVPTAAP 360

Query: 361 S--------EIGTRMEKFARLMGVPFKFNALYHSGDLSELDMAKLDIKE---DEALAINC 420
           S        EIG R+EKFARLMGVPF F A++H+GDL++LD+A LD++E     ALA+NC
Sbjct: 361 SAAAQRVMREIGQRLEKFARLMGVPFSFRAVHHAGDLADLDLAALDLREGGATAALAVNC 420

Query: 421 VGALRSVAAINNRRDFLISSFRSLRPRIITVIEEEADL---------------------- 454
           V ALR VA     RD  ++S R L PR++TV+EEEADL                      
Sbjct: 421 VNALRGVA---RGRDAFVASLRRLEPRVVTVVEEEADLAAPEADASSEADTDAAFVKVFG 480

[Close]

BLAST of IVF0004115 vs. ExPASy TrEMBL
Match: A0A5A7T0T0 (Protein SHORT-ROOT OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004060 PE=3 SV=1)

HSP 1 Score: 876.7 bits (2264), Expect = 4.2e-251
Identity = 453/490 (92.45%), Postives = 453/490 (92.45%), Query Frame = 0


Query: 1   MDTLFRLVNLQSDQQSYNSSRSTNSSSSRSSRQNQYHHYHQQEDEECYNLLMDDEDFSSS 60
           MDTLFRLVNLQSDQQSYNSSRSTNSSSSRSSRQNQYHHYHQQEDEECYNLLMDDEDFSSS
Sbjct: 1   MDTLFRLVNLQSDQQSYNSSRSTNSSSSRSSRQNQYHHYHQQEDEECYNLLMDDEDFSSS 60

Query: 61  SNSRQYYNNNPYHPPHPSSTTTPTPPLDQFSFLSPSPDFNFEFSGRWAPDILLETARAIS 120
           SNSRQYYNNNPYHPPHPSSTTTPTPPLDQFSFLSPSPDFNFEFSGRWAPDILLETARAIS
Sbjct: 61  SNSRQYYNNNPYHPPHPSSTTTPTPPLDQFSFLSPSPDFNFEFSGRWAPDILLETARAIS 120

Query: 121 DRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRALASASEKTCS 180
           DRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRALASASEKTCS
Sbjct: 121 DRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRALASASEKTCS 180

Query: 181 FESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIIDISNTYCTQWPTLLEALA 240
           FESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIIDISNTYCTQWPTLLEALA
Sbjct: 181 FESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIIDISNTYCTQWPTLLEALA 240

Query: 241 TRTDDTPHLRLTTVVTTKPS-------------EIGTRMEKFARLMGVPFKFNALYHSGD 300
           TRTDDTPHLRLTTVVTTKPS             EIGTRMEKFARLMGVPFKFNALYHSGD
Sbjct: 241 TRTDDTPHLRLTTVVTTKPSGGTGTAASQKVMKEIGTRMEKFARLMGVPFKFNALYHSGD 300

Query: 301 LSELDMAKLDIKEDEALAINCVGALRSVAAINNRRDFLISSFRSLRPRIITVIEEEADLD 360
           LSELDMAKLDIKEDEALAINCVGALRSVAAINNRRDFLISSFRSLRPRIITVIEEEADLD
Sbjct: 301 LSELDMAKLDIKEDEALAINCVGALRSVAAINNRRDFLISSFRSLRPRIITVIEEEADLD 360

Query: 361 ------------------------TLDESFSRTSNERLMLERAAGRAIVDLVACSAAESV 420
                                   TLDESFSRTSNERLMLERAAGRAIVDLVACSAAESV
Sbjct: 361 VGVDGIEFMRGFQECLRWFRVYFETLDESFSRTSNERLMLERAAGRAIVDLVACSAAESV 420

Query: 421 ERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAGIFLTWKEQ 454
           ERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAGIFLTWKEQ
Sbjct: 421 ERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAGIFLTWKEQ 480

[Close]

BLAST of IVF0004115 vs. ExPASy TrEMBL
Match: A0A1S3B100 (protein SHORT-ROOT OS=Cucumis melo OX=3656 GN=LOC103484850 PE=3 SV=1)

HSP 1 Score: 876.7 bits (2264), Expect = 4.2e-251
Identity = 453/490 (92.45%), Postives = 453/490 (92.45%), Query Frame = 0


Query: 1   MDTLFRLVNLQSDQQSYNSSRSTNSSSSRSSRQNQYHHYHQQEDEECYNLLMDDEDFSSS 60
           MDTLFRLVNLQSDQQSYNSSRSTNSSSSRSSRQNQYHHYHQQEDEECYNLLMDDEDFSSS
Sbjct: 1   MDTLFRLVNLQSDQQSYNSSRSTNSSSSRSSRQNQYHHYHQQEDEECYNLLMDDEDFSSS 60

Query: 61  SNSRQYYNNNPYHPPHPSSTTTPTPPLDQFSFLSPSPDFNFEFSGRWAPDILLETARAIS 120
           SNSRQYYNNNPYHPPHPSSTTTPTPPLDQFSFLSPSPDFNFEFSGRWAPDILLETARAIS
Sbjct: 61  SNSRQYYNNNPYHPPHPSSTTTPTPPLDQFSFLSPSPDFNFEFSGRWAPDILLETARAIS 120

Query: 121 DRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRALASASEKTCS 180
           DRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRALASASEKTCS
Sbjct: 121 DRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRALASASEKTCS 180

Query: 181 FESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIIDISNTYCTQWPTLLEALA 240
           FESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIIDISNTYCTQWPTLLEALA
Sbjct: 181 FESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIIDISNTYCTQWPTLLEALA 240

Query: 241 TRTDDTPHLRLTTVVTTKPS-------------EIGTRMEKFARLMGVPFKFNALYHSGD 300
           TRTDDTPHLRLTTVVTTKPS             EIGTRMEKFARLMGVPFKFNALYHSGD
Sbjct: 241 TRTDDTPHLRLTTVVTTKPSGGTGTAASQKVMKEIGTRMEKFARLMGVPFKFNALYHSGD 300

Query: 301 LSELDMAKLDIKEDEALAINCVGALRSVAAINNRRDFLISSFRSLRPRIITVIEEEADLD 360
           LSELDMAKLDIKEDEALAINCVGALRSVAAINNRRDFLISSFRSLRPRIITVIEEEADLD
Sbjct: 301 LSELDMAKLDIKEDEALAINCVGALRSVAAINNRRDFLISSFRSLRPRIITVIEEEADLD 360

Query: 361 ------------------------TLDESFSRTSNERLMLERAAGRAIVDLVACSAAESV 420
                                   TLDESFSRTSNERLMLERAAGRAIVDLVACSAAESV
Sbjct: 361 VGVDGIEFMRGFQECLRWFRVYFETLDESFSRTSNERLMLERAAGRAIVDLVACSAAESV 420

Query: 421 ERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAGIFLTWKEQ 454
           ERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAGIFLTWKEQ
Sbjct: 421 ERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAGIFLTWKEQ 480

[Close]

BLAST of IVF0004115 vs. ExPASy TrEMBL
Match: A0A0A0KGH6 (GRAS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G495620 PE=3 SV=1)

HSP 1 Score: 874.4 bits (2258), Expect = 2.1e-250
Identity = 451/490 (92.04%), Postives = 453/490 (92.45%), Query Frame = 0


Query: 1   MDTLFRLVNLQSDQQSYNSSRSTNSSSSRSSRQNQYHHYHQQEDEECYNLLMDDEDFSSS 60
           MDTLFRLVNLQSDQQSYNSSRSTNSSSSRSSRQNQYHHYHQQEDEECYNLLMDDEDFSSS
Sbjct: 1   MDTLFRLVNLQSDQQSYNSSRSTNSSSSRSSRQNQYHHYHQQEDEECYNLLMDDEDFSSS 60

Query: 61  SNSRQYYNNNPYHPPHPSSTTTPTPPLDQFSFLSPSPDFNFEFSGRWAPDILLETARAIS 120
           SNSRQYYN+NPYHPPHPSSTTTPTPPLDQFSFLSPSPDFNFEFSGRWAPDILLETARAIS
Sbjct: 61  SNSRQYYNSNPYHPPHPSSTTTPTPPLDQFSFLSPSPDFNFEFSGRWAPDILLETARAIS 120

Query: 121 DRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRALASASEKTCS 180
           DRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRALASASEKTCS
Sbjct: 121 DRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRALASASEKTCS 180

Query: 181 FESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIIDISNTYCTQWPTLLEALA 240
           FESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHI+DISNTYCTQWPTLLEALA
Sbjct: 181 FESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIVDISNTYCTQWPTLLEALA 240

Query: 241 TRTDDTPHLRLTTVVTTKPS-------------EIGTRMEKFARLMGVPFKFNALYHSGD 300
           TRTDDTPHLRLTTVVTTKPS             EIGTRMEKFARLMGVPFKFNALYHSGD
Sbjct: 241 TRTDDTPHLRLTTVVTTKPSGGTGAAASQKVMKEIGTRMEKFARLMGVPFKFNALYHSGD 300

Query: 301 LSELDMAKLDIKEDEALAINCVGALRSVAAINNRRDFLISSFRSLRPRIITVIEEEADLD 360
           LSELDMAKLDIKEDEALAINCVGALRSVAAINNRRDFLISSFRSLRPRIITVIEEEADLD
Sbjct: 301 LSELDMAKLDIKEDEALAINCVGALRSVAAINNRRDFLISSFRSLRPRIITVIEEEADLD 360

Query: 361 ------------------------TLDESFSRTSNERLMLERAAGRAIVDLVACSAAESV 420
                                   TLDESFSRTSNERLMLERAAGRAIVDLVACSAAESV
Sbjct: 361 VGVDGIEFMRGFQECLRWFRVYFETLDESFSRTSNERLMLERAAGRAIVDLVACSAAESV 420

Query: 421 ERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAGIFLTWKEQ 454
           ERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAGIFLTWKEQ
Sbjct: 421 ERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAGIFLTWKEQ 480

[Close]

BLAST of IVF0004115 vs. ExPASy TrEMBL
Match: A0A6J1IS19 (protein SHORT-ROOT-like OS=Cucurbita maxima OX=3661 GN=LOC111478797 PE=3 SV=1)

HSP 1 Score: 791.6 bits (2043), Expect = 1.8e-225
Identity = 416/490 (84.90%), Postives = 436/490 (88.98%), Query Frame = 0


Query: 1   MDTLFRLVNLQSDQQSYNSSRSTNSSSSRSSRQNQYHHYHQQEDEECYNLLMDDEDFSSS 60
           MDTLFRLVNLQS +QSYNSSR TNSSSSRSSRQNQY ++ Q +D+ECYNLLMDDEDFSSS
Sbjct: 1   MDTLFRLVNLQS-EQSYNSSR-TNSSSSRSSRQNQYQYHQQDDDQECYNLLMDDEDFSSS 60

Query: 61  SNSRQYYNNNPYHPPHPSSTTTPTPPLDQFSFLSPSPDFNFEFSGRWAPDILLETARAIS 120
           SNSRQYY  NPYH PHP ST TPT P+DQFS++SPSPD NFEFSGRWA DILLETARAIS
Sbjct: 61  SNSRQYY--NPYH-PHPPSTATPT-PIDQFSYVSPSPDINFEFSGRWAVDILLETARAIS 120

Query: 121 DRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRALASASEKTCS 180
           DRNS+RV QLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNY ALASASEKTCS
Sbjct: 121 DRNSSRVHQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYCALASASEKTCS 180

Query: 181 FESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIIDISNTYCTQWPTLLEALA 240
           F+STRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIIDIS+TYCTQWPTLLEALA
Sbjct: 181 FDSTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIIDISSTYCTQWPTLLEALA 240

Query: 241 TRTDDTPHLRLTTVVTTKP-------------SEIGTRMEKFARLMGVPFKFNALYHSGD 300
           TRTDDTPHLRLTT++TTKP              EIGTRMEKFARLMGVPFKFNALYHSGD
Sbjct: 241 TRTDDTPHLRLTTIITTKPGTGTGISASQKVMKEIGTRMEKFARLMGVPFKFNALYHSGD 300

Query: 301 LSELDMAKLDIKEDEALAINCVGALRSVAAINNRRDFLISSFRSLRPRIITVIEEEADLD 360
           LSELD+AKLDIKEDEALAINCVGALRS+AAINNRRDFLISSFRSLRPRIITVIEEEADLD
Sbjct: 301 LSELDLAKLDIKEDEALAINCVGALRSIAAINNRRDFLISSFRSLRPRIITVIEEEADLD 360

Query: 361 ------------------------TLDESFSRTSNERLMLERAAGRAIVDLVACSAAESV 420
                                   TLDESF+RTSNERLMLERAAGR+IVDLVACSAA+SV
Sbjct: 361 VGVDGTDFLRGFQECLRWFRVYFETLDESFTRTSNERLMLERAAGRSIVDLVACSAADSV 420

Query: 421 ERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAGIFLTWKEQ 454
           ERRE+A RWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQ+SDVAGIFLTWKEQ
Sbjct: 421 ERRESAVRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQNSDVAGIFLTWKEQ 480

[Close]

BLAST of IVF0004115 vs. ExPASy TrEMBL
Match: A0A6J1GCN6 (protein SHORT-ROOT-like OS=Cucurbita moschata OX=3662 GN=LOC111452975 PE=3 SV=1)

HSP 1 Score: 787.7 bits (2033), Expect = 2.5e-224
Identity = 416/490 (84.90%), Postives = 434/490 (88.57%), Query Frame = 0


Query: 1   MDTLFRLVNLQSDQQSYNSSRSTNSSSSRSSRQNQYHHYHQQEDEECYNLLMDDEDFSSS 60
           MDTLFRLVNLQS +QSYNSSR TNSSSSRSSRQNQY ++ Q +D+ECYNLLMDDEDFSSS
Sbjct: 1   MDTLFRLVNLQS-EQSYNSSR-TNSSSSRSSRQNQYQYHQQDDDQECYNLLMDDEDFSSS 60

Query: 61  SNSRQYYNNNPYHPPHPSSTTTPTPPLDQFSFLSPSPDFNFEFSGRWAPDILLETARAIS 120
           SNSRQYY  NPYH PHP ST TPT P+DQFS++SPSPD NFEFSGRWA DILLETARAIS
Sbjct: 61  SNSRQYY--NPYH-PHPPSTATPT-PIDQFSYVSPSPDINFEFSGRWAVDILLETARAIS 120

Query: 121 DRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRALASASEKTCS 180
           +RNSARV QLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNY ALASASEKTCS
Sbjct: 121 ERNSARVHQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYCALASASEKTCS 180

Query: 181 FESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIIDISNTYCTQWPTLLEALA 240
           F+STRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIIDIS+TYCTQWPTLLEALA
Sbjct: 181 FDSTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIIDISSTYCTQWPTLLEALA 240

Query: 241 TRTDDTPHLRLTTVVTTKP-------------SEIGTRMEKFARLMGVPFKFNALYHSGD 300
           TRTDDTPHLRLTT+VTTKP              EIGTRMEKFARLMGVPFKF+ALYHSGD
Sbjct: 241 TRTDDTPHLRLTTIVTTKPGNGTGVSASQKVMKEIGTRMEKFARLMGVPFKFSALYHSGD 300

Query: 301 LSELDMAKLDIKEDEALAINCVGALRSVAAINNRRDFLISSFRSLRPRIITVIEEEADLD 360
           LSELD AKLDIKEDEALAINCVGALRS+AAINNRRDFLISSFRSLRPRIITVIEEEADLD
Sbjct: 301 LSELDFAKLDIKEDEALAINCVGALRSIAAINNRRDFLISSFRSLRPRIITVIEEEADLD 360

Query: 361 ------------------------TLDESFSRTSNERLMLERAAGRAIVDLVACSAAESV 420
                                   TLDESF+RTSNERLMLERAAGRAIVDLVACSAA+SV
Sbjct: 361 VGVDGTEFLRGFQECLRWFRVYFETLDESFTRTSNERLMLERAAGRAIVDLVACSAADSV 420

Query: 421 ERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAGIFLTWKEQ 454
           ERRE+A RWAQRLHGNGF PVTFSDEVCDDVRALLRRYKEGWAMTQ+SDVAGIFLTWKEQ
Sbjct: 421 ERRESAVRWAQRLHGNGFSPVTFSDEVCDDVRALLRRYKEGWAMTQNSDVAGIFLTWKEQ 480

[Close]

BLAST of IVF0004115 vs. NCBI nr
Match: XP_008440387.1 (PREDICTED: protein SHORT-ROOT [Cucumis melo] >KAA0036418.1 protein SHORT-ROOT [Cucumis melo var. makuwa] >TYK12814.1 protein SHORT-ROOT [Cucumis melo var. makuwa])

HSP 1 Score: 870 bits (2249), Expect = 0.0
Identity = 453/490 (92.45%), Postives = 453/490 (92.45%), Query Frame = 0


Query: 1   MDTLFRLVNLQSDQQSYNSSRSTNSSSSRSSRQNQYHHYHQQEDEECYNLLMDDEDFSSS 60
           MDTLFRLVNLQSDQQSYNSSRSTNSSSSRSSRQNQYHHYHQQEDEECYNLLMDDEDFSSS
Sbjct: 1   MDTLFRLVNLQSDQQSYNSSRSTNSSSSRSSRQNQYHHYHQQEDEECYNLLMDDEDFSSS 60

Query: 61  SNSRQYYNNNPYHPPHPSSTTTPTPPLDQFSFLSPSPDFNFEFSGRWAPDILLETARAIS 120
           SNSRQYYNNNPYHPPHPSSTTTPTPPLDQFSFLSPSPDFNFEFSGRWAPDILLETARAIS
Sbjct: 61  SNSRQYYNNNPYHPPHPSSTTTPTPPLDQFSFLSPSPDFNFEFSGRWAPDILLETARAIS 120

Query: 121 DRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRALASASEKTCS 180
           DRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRALASASEKTCS
Sbjct: 121 DRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRALASASEKTCS 180

Query: 181 FESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIIDISNTYCTQWPTLLEALA 240
           FESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIIDISNTYCTQWPTLLEALA
Sbjct: 181 FESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIIDISNTYCTQWPTLLEALA 240

Query: 241 TRTDDTPHLRLTTVVTTKPS-------------EIGTRMEKFARLMGVPFKFNALYHSGD 300
           TRTDDTPHLRLTTVVTTKPS             EIGTRMEKFARLMGVPFKFNALYHSGD
Sbjct: 241 TRTDDTPHLRLTTVVTTKPSGGTGTAASQKVMKEIGTRMEKFARLMGVPFKFNALYHSGD 300

Query: 301 LSELDMAKLDIKEDEALAINCVGALRSVAAINNRRDFLISSFRSLRPRIITVIEEEADLD 360
           LSELDMAKLDIKEDEALAINCVGALRSVAAINNRRDFLISSFRSLRPRIITVIEEEADLD
Sbjct: 301 LSELDMAKLDIKEDEALAINCVGALRSVAAINNRRDFLISSFRSLRPRIITVIEEEADLD 360

Query: 361 ------------------------TLDESFSRTSNERLMLERAAGRAIVDLVACSAAESV 420
                                   TLDESFSRTSNERLMLERAAGRAIVDLVACSAAESV
Sbjct: 361 VGVDGIEFMRGFQECLRWFRVYFETLDESFSRTSNERLMLERAAGRAIVDLVACSAAESV 420

Query: 421 ERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAGIFLTWKEQ 453
           ERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAGIFLTWKEQ
Sbjct: 421 ERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAGIFLTWKEQ 480

[Close]

BLAST of IVF0004115 vs. NCBI nr
Match: XP_004141867.1 (protein SHORT-ROOT [Cucumis sativus] >KGN48608.1 hypothetical protein Csa_004113 [Cucumis sativus])

HSP 1 Score: 868 bits (2243), Expect = 0.0
Identity = 451/490 (92.04%), Postives = 453/490 (92.45%), Query Frame = 0


Query: 1   MDTLFRLVNLQSDQQSYNSSRSTNSSSSRSSRQNQYHHYHQQEDEECYNLLMDDEDFSSS 60
           MDTLFRLVNLQSDQQSYNSSRSTNSSSSRSSRQNQYHHYHQQEDEECYNLLMDDEDFSSS
Sbjct: 1   MDTLFRLVNLQSDQQSYNSSRSTNSSSSRSSRQNQYHHYHQQEDEECYNLLMDDEDFSSS 60

Query: 61  SNSRQYYNNNPYHPPHPSSTTTPTPPLDQFSFLSPSPDFNFEFSGRWAPDILLETARAIS 120
           SNSRQYYN+NPYHPPHPSSTTTPTPPLDQFSFLSPSPDFNFEFSGRWAPDILLETARAIS
Sbjct: 61  SNSRQYYNSNPYHPPHPSSTTTPTPPLDQFSFLSPSPDFNFEFSGRWAPDILLETARAIS 120

Query: 121 DRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRALASASEKTCS 180
           DRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRALASASEKTCS
Sbjct: 121 DRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRALASASEKTCS 180

Query: 181 FESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIIDISNTYCTQWPTLLEALA 240
           FESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHI+DISNTYCTQWPTLLEALA
Sbjct: 181 FESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIVDISNTYCTQWPTLLEALA 240

Query: 241 TRTDDTPHLRLTTVVTTKPS-------------EIGTRMEKFARLMGVPFKFNALYHSGD 300
           TRTDDTPHLRLTTVVTTKPS             EIGTRMEKFARLMGVPFKFNALYHSGD
Sbjct: 241 TRTDDTPHLRLTTVVTTKPSGGTGAAASQKVMKEIGTRMEKFARLMGVPFKFNALYHSGD 300

Query: 301 LSELDMAKLDIKEDEALAINCVGALRSVAAINNRRDFLISSFRSLRPRIITVIEEEADLD 360
           LSELDMAKLDIKEDEALAINCVGALRSVAAINNRRDFLISSFRSLRPRIITVIEEEADLD
Sbjct: 301 LSELDMAKLDIKEDEALAINCVGALRSVAAINNRRDFLISSFRSLRPRIITVIEEEADLD 360

Query: 361 ------------------------TLDESFSRTSNERLMLERAAGRAIVDLVACSAAESV 420
                                   TLDESFSRTSNERLMLERAAGRAIVDLVACSAAESV
Sbjct: 361 VGVDGIEFMRGFQECLRWFRVYFETLDESFSRTSNERLMLERAAGRAIVDLVACSAAESV 420

Query: 421 ERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAGIFLTWKEQ 453
           ERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAGIFLTWKEQ
Sbjct: 421 ERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAGIFLTWKEQ 480

[Close]

BLAST of IVF0004115 vs. NCBI nr
Match: XP_038883581.1 (protein SHORT-ROOT-like [Benincasa hispida])

HSP 1 Score: 803 bits (2075), Expect = 4.65e-291
Identity = 432/498 (86.75%), Postives = 439/498 (88.15%), Query Frame = 0


Query: 1   MDTLFRLVNLQSDQQSYNSSRSTNSSSSRSSRQNQYHHYHQQEDEECYNLLMDDEDFSSS 60
           MDTLFRLVNLQS+Q SYNSSR TNSSSSRSSRQNQYH YHQ EDEECYNLLMDDEDFSSS
Sbjct: 1   MDTLFRLVNLQSEQ-SYNSSR-TNSSSSRSSRQNQYH-YHQHEDEECYNLLMDDEDFSSS 60

Query: 61  SNSRQYYNNNPYHPPHPSSTTTPTP--------PLDQFSFLSPSPDFNFEFSGRWAPDIL 120
           SNSRQYYN  PYHP HP ST TPT         P+DQFSF SPSPDFNFEFSGRWAPDIL
Sbjct: 61  SNSRQYYN--PYHP-HPPSTATPTTATASTTPTPIDQFSFASPSPDFNFEFSGRWAPDIL 120

Query: 121 LETARAISDRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRALA 180
           LETARAISDRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRALA
Sbjct: 121 LETARAISDRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRALA 180

Query: 181 SASEKTCSFESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIIDISNTYCTQW 240
           SASEKTCSFESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIIDISNTYCTQW
Sbjct: 181 SASEKTCSFESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIIDISNTYCTQW 240

Query: 241 PTLLEALATRTDDTPHLRLTTVVTTKPS-------------EIGTRMEKFARLMGVPFKF 300
           PTLLEALATRTDDTPHLRLTTVVT+KPS             EIGTRMEKFARLMGVPFKF
Sbjct: 241 PTLLEALATRTDDTPHLRLTTVVTSKPSGGTGVAASQKVMKEIGTRMEKFARLMGVPFKF 300

Query: 301 NALYHSGDLSELDMAKLDIKEDEALAINCVGALRSVAAINNRRDFLISSFRSLRPRIITV 360
           NALYHSGDLSELD AKLDIKEDEALA+NCVGALRSVAAINNRRDFLISSFRSLRPRIITV
Sbjct: 301 NALYHSGDLSELDFAKLDIKEDEALAVNCVGALRSVAAINNRRDFLISSFRSLRPRIITV 360

Query: 361 IEEEADLD------------------------TLDESFSRTSNERLMLERAAGRAIVDLV 420
           IEEEADLD                        TLDESFSRTSNERLMLERAAGRAIVDLV
Sbjct: 361 IEEEADLDVGVDGIEFMRGFQECLRWFRVYFETLDESFSRTSNERLMLERAAGRAIVDLV 420

Query: 421 ACSAAESVERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAG 453
           ACSAA+SVERRE+A+RW QRLHGNGF PVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAG
Sbjct: 421 ACSAADSVERRESAARWTQRLHGNGFSPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAG 480

[Close]

BLAST of IVF0004115 vs. NCBI nr
Match: XP_022979035.1 (protein SHORT-ROOT-like [Cucurbita maxima])

HSP 1 Score: 785 bits (2028), Expect = 4.96e-284
Identity = 416/490 (84.90%), Postives = 436/490 (88.98%), Query Frame = 0


Query: 1   MDTLFRLVNLQSDQQSYNSSRSTNSSSSRSSRQNQYHHYHQQEDEECYNLLMDDEDFSSS 60
           MDTLFRLVNLQS+Q SYNSSR TNSSSSRSSRQNQY ++ Q +D+ECYNLLMDDEDFSSS
Sbjct: 1   MDTLFRLVNLQSEQ-SYNSSR-TNSSSSRSSRQNQYQYHQQDDDQECYNLLMDDEDFSSS 60

Query: 61  SNSRQYYNNNPYHPPHPSSTTTPTPPLDQFSFLSPSPDFNFEFSGRWAPDILLETARAIS 120
           SNSRQYYN  PYHP HP ST TPTP +DQFS++SPSPD NFEFSGRWA DILLETARAIS
Sbjct: 61  SNSRQYYN--PYHP-HPPSTATPTP-IDQFSYVSPSPDINFEFSGRWAVDILLETARAIS 120

Query: 121 DRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRALASASEKTCS 180
           DRNS+RV QLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNY ALASASEKTCS
Sbjct: 121 DRNSSRVHQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYCALASASEKTCS 180

Query: 181 FESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIIDISNTYCTQWPTLLEALA 240
           F+STRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIIDIS+TYCTQWPTLLEALA
Sbjct: 181 FDSTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIIDISSTYCTQWPTLLEALA 240

Query: 241 TRTDDTPHLRLTTVVTTKPS-------------EIGTRMEKFARLMGVPFKFNALYHSGD 300
           TRTDDTPHLRLTT++TTKP              EIGTRMEKFARLMGVPFKFNALYHSGD
Sbjct: 241 TRTDDTPHLRLTTIITTKPGTGTGISASQKVMKEIGTRMEKFARLMGVPFKFNALYHSGD 300

Query: 301 LSELDMAKLDIKEDEALAINCVGALRSVAAINNRRDFLISSFRSLRPRIITVIEEEADLD 360
           LSELD+AKLDIKEDEALAINCVGALRS+AAINNRRDFLISSFRSLRPRIITVIEEEADLD
Sbjct: 301 LSELDLAKLDIKEDEALAINCVGALRSIAAINNRRDFLISSFRSLRPRIITVIEEEADLD 360

Query: 361 ------------------------TLDESFSRTSNERLMLERAAGRAIVDLVACSAAESV 420
                                   TLDESF+RTSNERLMLERAAGR+IVDLVACSAA+SV
Sbjct: 361 VGVDGTDFLRGFQECLRWFRVYFETLDESFTRTSNERLMLERAAGRSIVDLVACSAADSV 420

Query: 421 ERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAGIFLTWKEQ 453
           ERRE+A RWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQ+SDVAGIFLTWKEQ
Sbjct: 421 ERRESAVRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQNSDVAGIFLTWKEQ 480

[Close]

BLAST of IVF0004115 vs. NCBI nr
Match: XP_023543503.1 (protein SHORT-ROOT-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 782 bits (2019), Expect = 1.16e-282
Identity = 416/490 (84.90%), Postives = 433/490 (88.37%), Query Frame = 0


Query: 1   MDTLFRLVNLQSDQQSYNSSRSTNSSSSRSSRQNQYHHYHQQEDEECYNLLMDDEDFSSS 60
           MDTLFRLVNLQS+Q SYNSSR TNSSSSRSSRQNQY ++ Q +D+ECYNLLMDDEDFSSS
Sbjct: 1   MDTLFRLVNLQSEQ-SYNSSR-TNSSSSRSSRQNQYQYHQQDDDQECYNLLMDDEDFSSS 60

Query: 61  SNSRQYYNNNPYHPPHPSSTTTPTPPLDQFSFLSPSPDFNFEFSGRWAPDILLETARAIS 120
           SNSRQYYN  PYHP HP ST TPTP +DQFS++SPSPD NFEFSGRWA DILLETARAIS
Sbjct: 61  SNSRQYYN--PYHP-HPPSTATPTP-IDQFSYVSPSPDINFEFSGRWAVDILLETARAIS 120

Query: 121 DRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRALASASEKTCS 180
           +RNSARV QLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNY ALASASEKTCS
Sbjct: 121 ERNSARVHQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYCALASASEKTCS 180

Query: 181 FESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIIDISNTYCTQWPTLLEALA 240
           F+STRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIIDIS+TYCTQWPTLLEALA
Sbjct: 181 FDSTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIIDISSTYCTQWPTLLEALA 240

Query: 241 TRTDDTPHLRLTTVVTTKPS-------------EIGTRMEKFARLMGVPFKFNALYHSGD 300
           TRTDDTPHLRLTT+VTTKP              EIGTRMEKFARLMGVPFKFNALYHSGD
Sbjct: 241 TRTDDTPHLRLTTIVTTKPGNGTGVSASQKVMKEIGTRMEKFARLMGVPFKFNALYHSGD 300

Query: 301 LSELDMAKLDIKEDEALAINCVGALRSVAAINNRRDFLISSFRSLRPRIITVIEEEADLD 360
           LSELD AKLDIKEDEALAINCVGALRS+ AINNRRDFLISSFRSLRPRIITVIEEEADLD
Sbjct: 301 LSELDFAKLDIKEDEALAINCVGALRSITAINNRRDFLISSFRSLRPRIITVIEEEADLD 360

Query: 361 ------------------------TLDESFSRTSNERLMLERAAGRAIVDLVACSAAESV 420
                                   TLDESF+RTSNERLMLERAAGRAIVDLVACSAA+SV
Sbjct: 361 VGVDGTEFLRGFQECLRWFRVYFETLDESFTRTSNERLMLERAAGRAIVDLVACSAADSV 420

Query: 421 ERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAGIFLTWKEQ 453
           ERRE+A RWAQRLHGNGF PVTFSDEVCDDVRALLRRYKEGWAMTQ+SDVAGIFLTWKEQ
Sbjct: 421 ERRESAVRWAQRLHGNGFSPVTFSDEVCDDVRALLRRYKEGWAMTQNSDVAGIFLTWKEQ 480

[Close]

BLAST of IVF0004115 vs. TAIR 10
Match: AT4G37650.1 (GRAS family transcription factor )

HSP 1 Score: 548.1 bits (1411), Expect = 6.5e-156
Identity = 299/530 (56.42%), Postives = 370/530 (69.81%), Query Frame = 0


Query: 1   MDTLFRLVNLQSDQQS-----YNSSRSTNSSSSRSSRQNQYHHYHQQED--EECYNLLMD 60
           MDTLFRLV+LQ  QQS       SS S  S+++  S Q  YH+   Q D  EEC+N  MD
Sbjct: 1   MDTLFRLVSLQQQQQSDSIITNQSSLSRTSTTTTGSPQTAYHYNFPQNDVVEECFNFFMD 60

Query: 61  DEDFSSSSNSRQYYN-NNP--YHPP-------HPSSTTTPTPPLDQFSFLSP-------- 120
           +ED SSSS+   ++N NNP  Y+ P       HP++++TP+      +  SP        
Sbjct: 61  EEDLSSSSSHHNHHNHNNPNTYYSPFTTPTQYHPATSSTPSSTAAAAALASPYSSSGHHN 120

Query: 121 ----------SPDFNFEFSGRWAPDILLETARAISDRNSARVQQLMWMLNELSSPYGDTD 180
                      P F+F  + +WA  +LLE ARA SD+++AR QQ++W LNELSSPYGDT+
Sbjct: 121 DPSAFSIPQTPPSFDFSANAKWADSVLLEAARAFSDKDTARAQQILWTLNELSSPYGDTE 180

Query: 181 QKLAAYFLQALFSRMTDSGDRNYRAL--ASASEKTCSFESTRKVMLKFQEVSPWTTFGHV 240
           QKLA+YFLQALF+RMT SG+R YR +  A+A+EKTCSFESTRK +LKFQEVSPW TFGHV
Sbjct: 181 QKLASYFLQALFNRMTGSGERCYRTMVTAAATEKTCSFESTRKTVLKFQEVSPWATFGHV 240

Query: 241 SCNGALIEALEGESKLHIIDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVTTKP---- 300
           + NGA++EA++GE+K+HI+DIS+T+CTQWPTLLEALATR+DDTPHLRLTTVV        
Sbjct: 241 AANGAILEAVDGEAKIHIVDISSTFCTQWPTLLEALATRSDDTPHLRLTTVVVANKFVND 300

Query: 301 --------SEIGTRMEKFARLMGVPFKFNALYHSGDLSELDMAKLDIKEDEALAINCVGA 360
                    EIG RMEKFARLMGVPFKFN ++H GDLSE D+ +LD+K DE LAINCVGA
Sbjct: 301 QTASHRMMKEIGNRMEKFARLMGVPFKFNIIHHVGDLSEFDLNELDVKPDEVLAINCVGA 360

Query: 361 LRSVAAINNRRDFLISSFRSLRPRIITVIEEEADL------------------------- 420
           +  +A+  + RD +ISSFR LRPRI+TV+EEEADL                         
Sbjct: 361 MHGIASRGSPRDAVISSFRRLRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGECLRWFRV 420

Query: 421 --DTLDESFSRTSNERLMLERAAGRAIVDLVACSAAESVERRETASRWAQRLHGNGFGPV 454
             ++ +ESF RTSNERLMLERAAGRAIVDLVAC  ++S ERRETA +W++R+  +GFG V
Sbjct: 421 CFESWEESFPRTSNERLMLERAAGRAIVDLVACEPSDSTERRETARKWSRRMRNSGFGAV 480

[Close]

BLAST of IVF0004115 vs. TAIR 10
Match: AT3G49950.1 (GRAS family transcription factor )

HSP 1 Score: 189.9 bits (481), Expect = 4.5e-48
Identity = 126/414 (30.43%), Postives = 200/414 (48.31%), Query Frame = 0


Query: 82  TPTPPLDQFSFLSPSP-----DFNFEFSGRWAPDILLETARAISDRNSARVQQLMWMLNE 141
           T T  L+   F SP P     D NF         +LL  A AI   ++A   Q++W+LN 
Sbjct: 2   TKTRILNPTRFPSPKPLRGCGDANF------MEQLLLHCATAIDSNDAALTHQILWVLNN 61

Query: 142 LSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRALASASEKTCSFESTRKVMLKFQEVSP 201
           ++ P GD+ Q+L + FL+AL SR           ++   +       +   +  F +++P
Sbjct: 62  IAPPDGDSTQRLTSAFLRALLSRAVSKTPTLSSTISFLPQADELHRFSVVELAAFVDLTP 121

Query: 202 WTTFGHVSCNGALIEALEGESKLHIIDISNTYCTQWPTLLEALATRTDDTPHLRLTTVVT 261
           W  FG ++ N A++ A+EG S +HI+D+S T+C Q PTL++A+A+R +  P L   TVV+
Sbjct: 122 WHRFGFIAANAAILTAVEGYSTVHIVDLSLTHCMQIPTLIDAMASRLNKPPPLLKLTVVS 181

Query: 262 TKP----------SEIGTRMEKFARLMGVPFKFN---ALYHSGDLSELDMAKL-DIKEDE 321
           +             E+G+++  FA    +  +F    + Y  G  S L   ++     +E
Sbjct: 182 SSDHFPPFINISYEELGSKLVNFATTRNITMEFTIVPSTYSDGFSSLLQQLRIYPSSFNE 241

Query: 322 ALAINCVGALRSV------AAINNRRDFLISSFRSLRPRIITVIEEEADLDT-------- 381
           AL +NC   LR +      ++ ++ R   +   RSL PRI+T+IEE+ DL +        
Sbjct: 242 ALVVNCHMMLRYIPEEPLTSSSSSLRTVFLKQLRSLNPRIVTLIEEDVDLTSENLVNRLK 301

Query: 382 ---------LDESFSRTSNERLMLERAAGRAIVDLVACSAAESVERRETASRWAQRLHGN 441
                     D + +  S +R   E      I ++VA   AE VER ET  RW +R+   
Sbjct: 302 SAFNYFWIPFDTTDTFMSEQRRWYEAEISWKIENVVAKEGAERVERTETKRRWIERMREA 361

Query: 442 GFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAGIFLTWKEQPVVWASAWRP 454
            FG V   ++   DV+A+L  +  GW M +  D   + LTWK   VV+A+ W P
Sbjct: 362 EFGGVRVKEDAVADVKAMLEEHAVGWGMKKEDDDESLVLTWKGHSVVFATVWVP 409

[Close]

BLAST of IVF0004115 vs. TAIR 10
Match: AT2G04890.1 (SCARECROW-like 21 )

HSP 1 Score: 186.8 bits (473), Expect = 3.8e-47
Identity = 116/373 (31.10%), Postives = 193/373 (51.74%), Query Frame = 0


Query: 111 ILLETARAISDRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRA 170
           +L+  A+A+S+ N    +  M  L  + S  G+  Q+L AY L+ L +R+  SG   Y++
Sbjct: 53  VLVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAASGSSIYKS 112

Query: 171 LASASEKTCSFESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIIDISNTYCT 230
           L S   ++  F S   V+    EV P+  FG++S NGA+ EA++ E ++HIID      +
Sbjct: 113 LQSREPESYEFLSYVYVL---HEVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIGQGS 172

Query: 231 QWPTLLEALATRTDDTPHLRLTTV------VTTKPSEIGTRMEKFARLMGVPFKFNALYH 290
           QW  L++A A R    P++R+T V      VT K      R+EK A+   VPF+FNA+  
Sbjct: 173 QWIALIQAFAARPGGAPNIRITGVGDGSVLVTVK-----KRLEKLAKKFDVPFRFNAV-- 232

Query: 291 SGDLSELDMAKLDIKEDEALAINCVGALRSV----AAINNRRDFLISSFRSLRPRIITVI 350
           S    E+++  LD+++ EAL +N    L  +     ++ N RD L+   +SL P+++T++
Sbjct: 233 SRPSCEVEVENLDVRDGEALGVNFAYMLHHLPDESVSMENHRDRLLRMVKSLSPKVVTLV 292

Query: 351 EEEADLDT--------------------LDESFSRTSNERLMLER-AAGRAIVDLVACSA 410
           E+E + +T                    +D    R   ER+ +E+    R +V+++AC  
Sbjct: 293 EQECNTNTSPFLPRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDVVNIIACEG 352

Query: 411 AESVERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAGIFLT 453
           AE +ER E   +W  R    GF P   S  +   +RALLR Y  G+A+ +      ++L 
Sbjct: 353 AERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRDYSNGYAIEERD--GALYLG 412

[Close]

BLAST of IVF0004115 vs. TAIR 10
Match: AT1G50600.1 (scarecrow-like 5 )

HSP 1 Score: 175.6 bits (444), Expect = 8.8e-44
Identity = 113/377 (29.97%), Postives = 183/377 (48.54%), Query Frame = 0


Query: 111 ILLETARAISDRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRA 170
           +L E A+A+ + +      L+  L ++ S  G+  Q+L AY L+ L +R+  SG   Y+A
Sbjct: 230 VLYECAKAVENYDLEMTDWLISQLQQMVSVSGEPVQRLGAYMLEGLVARLASSGSSIYKA 289

Query: 171 LASASEKTCSFESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIIDISNTYCT 230
           L     K  +       M    E  P+  FG+ S NGA+ EA++ ES +HIID   +   
Sbjct: 290 LRC---KDPTGPELLTYMHILYEACPYFKFGYESANGAIAEAVKNESFVHIIDFQISQGG 349

Query: 231 QWPTLLEALATRTDDTPHLRLTTVVTTKPS--------EIGTRMEKFARLMGVPFKFNAL 290
           QW +L+ AL  R    P++R+T +   + S         +G R+ K A + GVPF+F   
Sbjct: 350 QWVSLIRALGARPGGPPNVRITGIDDPRSSFARQGGLELVGQRLGKLAEMCGVPFEF--- 409

Query: 291 YHSGDL--SELDMAKLDIKEDEALAINCVGALRSV----AAINNRRDFLISSFRSLRPRI 350
            H   L  +E+++ KL ++  EALA+N    L  +      + N RD L+   + L P +
Sbjct: 410 -HGAALCCTEVEIEKLGVRNGEALAVNFPLVLHHMPDESVTVENHRDRLLRLVKHLSPNV 469

Query: 351 ITVIEEEADLDT--------------------LDESFSRTSNERLMLER-AAGRAIVDLV 410
           +T++E+EA+ +T                    +D   +R   ER+ +E+    R +V+L+
Sbjct: 470 VTLVEQEANTNTAPFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCLAREVVNLI 529

Query: 411 ACSAAESVERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAG 453
           AC   E  ER E   +W  R H  GF P   S  V   ++ LL  Y E + + +      
Sbjct: 530 ACEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLESYSEKYTLEERD--GA 589

[Close]

BLAST of IVF0004115 vs. TAIR 10
Match: AT5G48150.1 (GRAS family transcription factor )

HSP 1 Score: 172.6 bits (436), Expect = 7.5e-43
Identity = 107/374 (28.61%), Postives = 187/374 (50.00%), Query Frame = 0


Query: 112 LLETARAISDRNSARVQQLMWMLNELSSPYGDTDQKLAAYFLQALFSRMTDSGDRNYRAL 171
           L+  A+A+S+ +      +M  L ++ S  G+  Q+L AY L+ L +++  SG   Y+AL
Sbjct: 123 LVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSSIYKAL 182

Query: 172 ASASEKTCSFESTRKVMLKFQEVSPWTTFGHVSCNGALIEALEGESKLHIIDISNTYCTQ 231
               E   +       M    EV P+  FG++S NGA+ EA++ E+++HIID      +Q
Sbjct: 183 NRCPEPAST--ELLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQ 242

Query: 232 WPTLLEALATRTDDTPHLRLTTVVTTKP--------SEIGTRMEKFARLMGVPFKFNALY 291
           W TL++A A R    P +R+T +             S +G R+ K A+   VPF+FN++ 
Sbjct: 243 WVTLIQAFAARPGGPPRIRITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEFNSV- 302

Query: 292 HSGDLSELDMAKLDIKEDEALAINCVGALRSV----AAINNRRDFLISSFRSLRPRIITV 351
            S  +SE+    L ++  EALA+N    L  +     +  N RD L+   +SL P+++T+
Sbjct: 303 -SVSVSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRMVKSLSPKVVTL 362

Query: 352 IEEEADLDT--------------------LDESFSRTSNERLMLER-AAGRAIVDLVACS 411
           +E+E++ +T                    +D +  R   +R+ +E+    R +V+++AC 
Sbjct: 363 VEQESNTNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIACE 422

Query: 412 AAESVERRETASRWAQRLHGNGFGPVTFSDEVCDDVRALLRRYKEGWAMTQSSDVAGIFL 453
            A+ VER E   +W  R    GF P   S  V   +++LLR Y + + + +      ++L
Sbjct: 423 GADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYSDKYRLEERD--GALYL 482

The following BLAST results are available for this feature:

BLAST of IVF0004115 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZF7	9.2e-155	56.42	Protein SHORT-ROOT OS=Arabidopsis thaliana OX=3702 GN=SHR PE=1 SV=1	[more]
A2YN56	1.0e-129	48.42	Protein SHORT-ROOT 1 OS=Oryza sativa subsp. indica OX=39946 GN=SHR1 PE=3 SV=1	[more]
Q8H2X8	1.5e-128	48.09	Protein SHORT-ROOT 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SHR1 PE=1 SV=2	[more]
Q75I13	7.6e-125	46.70	Protein SHORT-ROOT 2 OS=Oryza sativa subsp. japonica OX=39947 GN=SHR2 PE=1 SV=1	[more]
A2XIA8	1.7e-124	46.53	Protein SHORT-ROOT 2 OS=Oryza sativa subsp. indica OX=39946 GN=SHR2 PE=3 SV=1	[more]

BLAST of IVF0004115 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T0T0	4.2e-251	92.45	Protein SHORT-ROOT OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G0...	[more]
A0A1S3B100	4.2e-251	92.45	protein SHORT-ROOT OS=Cucumis melo OX=3656 GN=LOC103484850 PE=3 SV=1	[more]
A0A0A0KGH6	2.1e-250	92.04	GRAS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G495620 PE=3 S...	[more]
A0A6J1IS19	1.8e-225	84.90	protein SHORT-ROOT-like OS=Cucurbita maxima OX=3661 GN=LOC111478797 PE=3 SV=1	[more]
A0A6J1GCN6	2.5e-224	84.90	protein SHORT-ROOT-like OS=Cucurbita moschata OX=3662 GN=LOC111452975 PE=3 SV=1	[more]

BLAST of IVF0004115 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008440387.1	0.0	92.45	PREDICTED: protein SHORT-ROOT [Cucumis melo] >KAA0036418.1 protein SHORT-ROOT [C...	[more]
XP_004141867.1	0.0	92.04	protein SHORT-ROOT [Cucumis sativus] >KGN48608.1 hypothetical protein Csa_004113...	[more]
XP_038883581.1	4.65e-291	86.75	protein SHORT-ROOT-like [Benincasa hispida]	[more]
XP_022979035.1	4.96e-284	84.90	protein SHORT-ROOT-like [Cucurbita maxima]	[more]
XP_023543503.1	1.16e-282	84.90	protein SHORT-ROOT-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of IVF0004115 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37650.1	6.5e-156	56.42	GRAS family transcription factor	[more]
AT3G49950.1	4.5e-48	30.43	GRAS family transcription factor	[more]
AT2G04890.1	3.8e-47	31.10	SCARECROW-like 21	[more]
AT1G50600.1	8.8e-44	29.97	scarecrow-like 5	[more]
AT5G48150.1	7.5e-43	28.61	GRAS family transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005202	Transcription factor GRAS	PFAM	PF03514	GRAS	coord: 111..346 e-value: 8.2E-67 score: 225.8
IPR005202	Transcription factor GRAS	PANTHER	PTHR31636	OSJNBA0084A10.13 PROTEIN-RELATED	coord: 347..452
IPR005202	Transcription factor GRAS	PANTHER	PTHR31636	OSJNBA0084A10.13 PROTEIN-RELATED	coord: 1..349
IPR005202	Transcription factor GRAS	PROSITE	PS50985	GRAS	coord: 99..452 score: 72.822418
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..43
IPR030019	Protein short-root	PANTHER	PTHR31636:SF9	PROTEIN SHORT-ROOT	coord: 347..452
IPR030019	Protein short-root	PANTHER	PTHR31636:SF9	PROTEIN SHORT-ROOT	coord: 1..349

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0004115.1	IVF0004115.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008356	asymmetric cell division
biological_process	GO:0055072	iron ion homeostasis
biological_process	GO:0048366	leaf development
biological_process	GO:0045930	negative regulation of mitotic cell cycle
biological_process	GO:0009956	radial pattern formation
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding