IVF0004111 (gene) Melon (IVF77) v1

Overview


Name	IVF0004111
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chr03: 5841270 .. 5852772 (-)
RNA-Seq Expression	IVF0004111
Synteny	IVF0004111

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACAGATGAAAGATTGTAGACTTGGTAGGGTTATTTCCGACCATTTCCTCAATCCCCTTCGCTCACAGCCAAACCACCGCCGCCAAATCCGCCACCACTTCAATCCTCGAACACTTGAAAGAGGGTCGCTTCCGAAGAGCTGTCTTATCCTGTTTGATTTCCCATTTCCCTTTCTACATCCTCTCTACTCTCCATTCTCCCAAATTTGCTCTTCCACTCGGCCCCACTCAAGAGTCGCCATTGTCTACTTCACCTAAGTTCCGTTCTTCATAGCACAACCGTACTTATATGCACCTCCAGCTAAACAAACTTCTTGGTGCGCACAAGGCTTTGCTTTCTCATTACTCTTCTCTGATACGCCAGTGTTTAGTTGTTGGATCTGTTCACAATGCCAAAACAATCCACGCTCAATTGCTAAAGCTTGGCCTTGACAGCAATACTTTTCTGGGCAATCATTGTCTTCAGCTATATACGCTATTTGGTCCTGTCCATGACGTATTGAAAGCATTTGATGGGATTAAAGATAAGAATATTATATCCTGGAACATATGCTTAAAGGGTATGTTTAGATTTGGCGACGTCGATGCTCCCCGTCACCTGTTCGATGTAATGCCTGAGAGGGACATTGTTTCTTGGAACACTATGATTTCTGGCTACGTTTCATCTGGATTTGCTAAGAGTGCAATGGGCATTTCTCTGGAAATGCAAAATGCTGGTTTTAGACCAAGTGAGTATACCTTCTCCATTTTGCTTTCACTTGTGTCGTCTGCTTTTCATGGTAAGCAAGTTCATGGCAGTATGATACGAAGTGGTGTGGATGTATCAAGTATGGTGCTTGGGAATTCATTGATTGATATGTATGGAAAAGTTGGCCTTGTTGATTATATGTTTGTCATATTTTCTAGTATGGAAAAGGTGGATGTTATCTCTTGGAATTCTTTGATTTTAGGCTGTCATAGATCAGGCTTTAGAGTATTGGCACTCAATCAGTTCTTTCTAATGAGAACCACTGAGCACTCACCTGATCAGTTCACTATATCAATGGTGATCAGTATCTGCTGTTGCCTCCAAGAGTTGGAACTGGGTAAGCAAATTTTTGCTTTCTGTATCAAGATGGGATTTACTTCTAACAGCATTGTACTTAGTGCTACAATTGACTTGTTTTCCAAATGCGACAGTTTGAAGGTTGCAGTGCAGCTTTTTGAAGATACCAATCAATTGGATCGAGTTCTTTGTAATGTCATGATCTCAAGTTTTGCATGGCATGGTCATTGGAGGGATTCCATGTGGCTTTTTGTGTATACCTTAAGAGAGAACCTTGGGCCAATTGACACTACACTGAGCAGTGTGCTGAGCTCCGTTTCAGTTTTCACACCTGTGGAGTTGGGCAGTCAAATTCATAATTTGGTTCTTAAGTTAGGTTTTGAGTTTGATGTCATTGTGGCTAGTTCGCTGGTAGACATGTATGCTAAAGTTGGATCAATTGATGATGCCATGAAAGTCTTTATAGATATGCCCTTTAGAGATTTGATATCTTGGAACACTATGATTATGGGTCTGGTTGACAATGGTAAATACTTTGAGGCCCTACACACTTTTAATAAATTGGTCATGGAAGGTGTACTGCCAGATAGGATAACACTAGCCGGAGTCTTATTAGCTTGCAGTTATGCTGGTTTTGTTGAGGAAGGGTTAGGCATCTTCTCTACAATGACATATGAACATGGAGTTGTGCCAAGCAATGAACATTATTCTTGTGTTGTGAACTTGCTGAGTCGGGCTGGTAAATTTGAAGAAGCAGTTAATATTATCAAAACAACACCGTACCAACCTACTTCTACATTTTGGACGTCACTTCTTGGTGTTTGTGCAATTCATGGAGACCTAAAAATCATTGAAAAAGTTGCAGAGTGGGTGATGAAGCTGGAACCACAATCATCCCTACCATATTCAGTGCTGGCTCAAGCATATGCGATGAGATGTCAATGGGAAAGCATGGTTCGTGTCAAGAATACTTGGGAGAATATAGCTGCACAAAAGGTGAAGGCTTGCAGCTGGATTGTGACAAAAGATTGTGCGTATGCTTTCGAGGATGACCAATTACAGCTTCTGTTGAGAGAAAATTTCATTTCAGTGTTGGAATTAATTATCTGGGAGATTGAATATGGGATTGACTATGAACAGTATCTGGAAATAATACATTAAAATTGTTTTGTGATATTGATTATGTGAACCTCAAATTTATCGAATTCTTAATACCCAAGGGCCAACATCTCAATCTTTGGGGTTGTGGACTCTCTGACAATCACACTGAACGGATGCTCCCAGACTGTTCTTAGGAACTTGTGGATGAGACATGGTAAACGTATTGTGCTTGGAATCCTTCATAGAGTGCCTCATTGGATTAAGTTTTTTCTGGATTTGAAGATACTGTTTCCTCTTTGGTGCAAATCTGATGCCCTGTTAAGAGATTAGCAGCTTTGTTTTGATGTTCAGCGACTATTCTCTTTGCATTTGTGTGGGTTTGCAATGGTGGGATACCAATTGAAAGCATTTGCAGTGACGTTTGCTGGAACTAACCTTTGTGCAATGGAAGATGAAGTTTGGAAGAAAACTGATACATACATATTCATGCTTCAAGAGACTGGAGAGACGTGAAGATGATGTAATGCTTCCTCCAACTCCTCATTGGCCTCCATCTATATCATTGTGGCCACCTGTTTAAATAATTATATTATCCATGTTTGTTTTTTGAGTTTAACTCTTACAAGCTTGCTCACCTTAACCCTTATCTTAATTTTTATCTCATTGAAAAATCATAATTTCATGTAGAATTAACGATGGAAGTTATTTCCCATTACAGTATCCAATTTTTGCTATTGGCCACTGAAGAGCAATTCATGTTTAAGAGCTCAACGTGAAGAAGATAGGGTCTTGATCTACCCAGCATATTGAATCAATCTCATAATCCTCATCAAGTCAAGCCATTCACTAACTAAGCTGCCAAGACGTGCTTAGTGGAATTGTAGCGAGTTCATTGAGGTGCTGTAAATGGGTTCATAGCATGCTGGAAGAAGGATAATCTGTGTTCTGTAATTCCAACACTACAACAAACTTGGTGATACTTTGTGTTTCTACTTGAAGGGTGAGGGGATTTAGTTTTAGTTGCCTTTGTTGGTACATAGCACAACCCACTGATTATTTATTCTTTGACATAAATATTCATAAACTATATGATATGATTCTAATTGAAAATAGGGCAAGAACTGACCATACAATTGACAAATATTCTGATGATCAATAGGTCACTTTGGTGCTAATAACTTTGTAGAAATGATACTGTAGTGTGTGAAAGATCGTATTGTATAAAAAAAATCTTATTGATGCATATATCATTATATCCTATTTCTATTCCATGCATTCTCGGTAAGATAATCTGGTTTTTCTTTTAAATGCTCTGATTCTTTCTAGGGTCTTTGTAAGCTCTTGTTCCTCTCATAGGTTTGATTACTAATAGTAGAAAAAACTAATCGGTTTTTGTGTTACTGGGGAGATAAACTAAAACACAAATCGATGGATGACGTGCACTAAGCAGACTGTTCTCTCCATCAAAAGCTTTTTGTTCTGAAGTAGCTCTCAGGATAGCTCATCTGCACAATGCAACGGACCAGTTTGTCTGCTAGGCTAGTAGTAGCATGTCTATAGAGCAAGCATTGGATCCCGGGTCATCTTCTTGGTGTGAAAGAAATAGGTAAGGAAGCTGTTGCATATATTGTGTATATTTATGCTGTCTGCCCAAATACTGTTGCGGCTTGTCTAATAGCATGATTTAACCTCATAAGAGATTATTTTTATTAAGGAAGAACCTCAAACAATTATACTCTAAAATGGAATTCTTAGATCTTTTGCCTTTTTCTCTACTGTGGATGGGCATGTGTTTCCGCCTGCTATTCAATATATCTAAAATGCTGCAATGCACTTCTCAATTCAGTTGACCTGTTAGAGTGAAAAAGCCAGTTAATAAATGTCAAATATTGAGAGAATAGGAAAGTGCCTGACACTGGTATGTCAAAGAAATTAGTGACAAACAACATGGTGATAGAACTCCGGCCAAGTAAGCTGAATGAACTCTTCTTTTATTAGAATCAGTAACAAACACATAGAATTGATGAGGTATCAATTCTGCCACAAGCTCTTGATCTTGCTTCTCAAGAATCAAGTACAACTTCTTCACTAAATTTCTGACGATCTTCTTCTATCATTACTCCCCTATTTATACACATTTTCTTAACACATTTAACATGTGTTTTCTAACTAATTTCTAACTAATCTGTTAACTGCTTTCCTAACTAATTCTGTTGTAGTTTATTTCTTCTTTGGTAAACTAACTTGATTGGAGGTCTAACATTACTCCCTCCTTTGAGATTCACCTTGTCCTCAAGGTGTAGATTAGGGTACCGCTGGTGCATTTCATCATAGTCTTCCCACGACGCTTCATAGTCCGGCAAATTCTTCCAGGCAACTAGCACTTCCCACTTCCCGGTTTTGTCTTGTCTGTAGTCACGTGCTTCTTCCGGTTGAGACTGCCACTCGAGCTTCTCTGTTATGTTTTGTAGTGTGGGCACTATATTTGTCTGCTGATTTACGAACTTTTTTAGTTGTGAAACATGAAAAACAGGGTGGATAGCGGCGTCCGTTGGTAATTCCAATCTATACGCTAACTCACCAATTCTTTCGAGAATTTTGTAGGGTCCAAAATACCGTGATGATAGTTTTTCATTCCTTTTGCTTCGTAGGGTGGCTTGTCGGTATGGTCGTATTTTAAGTAATACTAAGTCATCAACCTGGAATTCCACTTGTCTTCTTTTTCGGTCAGCATATAGTTTCATTTGTTGTTGAGCTAGCAATAAGTGCTCCCGTAGTGCGTCTAAGGCCACATTTCGTTCTTTCAACTGCTCGTCTATTGAAGAATTTGAAGTTCTTCGTTCTCCATAAGATAGTAGGGCTGGCGGTTTATGGCCATAGACCACTTGAAAGGGTGATTTTCCCAGCGCCTTTTGATAGGTAGTGTTGTACCAGTACTCGGCCTAAGGTAGCCACAGGATCCATTCCTTTGGGCGTTCACTACAAAAGCATCTGAGATAGGTTTCTAGTCCTCTGTTGACTACCTCTGTTTGTCCGTCGGTCTGTGGGTGGTAAGCTGTGCTTTTCTTGAGTTTAGTGCCCGCCATTTTGAACAATTCATTCCAGAAATGGCTGAGAAAAACTTTGTCTCGATCGGAGACAATGGAAGTAGGGAAGCCGTGCAGTCGCACTATTTCTTTTACAAAGCTTTCTGCTACTGTCTTAGCTGTGTAAGGGTGTTTAAGGGCCAAGAAGTGGCTGTATTTGCTGAGCCGATCTACTACCACGAGTATTACATCCCATCCTTTTGCTTTAGGTAGACCATCAATGAAGTCCATAGAGATGTCGCTCCAAATTTGATGCGGTATGTCAAGTGGCATTAATAGTCCGACTGGCGATAGAGCTAAGCTTTTGTTGCGTTGGCATGTTACGCAAGCTTCACAATGTTTTTAACATCTGATTTCATCCCCTCCCAATATAGCTCACTTGCTAGCCTTTTATAAGTTCTTAGGAACCCGGAGTGTCCTCCTACTACTGAGTCATGAAATGTATTCATTATGGCTGGAATTAGGGAGGACACTTTTGAGATTACCAGTCTATTCTTGTAATGCAGGAGGCTATTCTTTATTGTGAATTTGCTGGTTTGGTCTTCGTCCTCTTCGTTTAAGCTTGCTACTATTTTCTTTAGCTTTTCATCTTTCTCTACTTCTTCCTTTATGGTTTCCAAGTCCATCCAATATGGTATTGAAATGCTGTTTAATTGTATGTCCGGTGGTCTTCTTGATAAAGCATCGGCTGCTTTATTTTCTAAGCCGGGTTTGTACACCACTTCAAATGAGTACCCCAATAGTTTAGATAACCATTTTTGATATTGTGGCTGGATGACCCGTTGTTCTAGCAAAAATTTCAGTGATTTTTGATCCGTTTTTACTACGAATTTTGCCCCAAGCAAGTATGGCCTCCATCTTTGTACGGATAGTACAACTGCCATCAACTCGCGTTCATATACTGGCCGAGCTCTATCTCTCATGGATAGTGTGTGGCTGTAGAAGGCAATGGGTCTCTTTGACTGGATTAGTACTGCTCCCACTCCAAAACCGGACGCATCTGTCTCTATTTCAAATGGGAGTGTAAAGTTGGGTAAGGCTAACGTTGGTAGAGACATCATTGCAGACTTCAGCTTTCGAAATGATTCTTCCGCATCTTCGTTCCATTTGAATCCCCCTTTTTTGAGTAGTTGGGTTAATGGGGCTGCTATTGATCCATAATGTTGGACAAATCTCCTGTAATAGCCTGTTAATCGAAGGAATCCCCGAACTTCTCTTATATTTGTTGGGCATGGCCAATCTGCAACAACTTTTATTTTCTCCGAGTCTACTTCCACTCCTTCTCCTGATATGATGTGTCCCAAGTATTCTACCTTCTTCTGGCCAAAGTTGCACTTCTTTTTATTGGCGAAGAGGCTATGCTTTCTCAATGCAAGAAAGACCTTTTCAATATGCTCTATGTGGTCTTTTTCATTCTTGCTATAGATCAGGATGTCATCGAAGAAGACCAGCACGAGCTTTCTCAAAAATGGTCTAAAGATGCTATTCATTAGGGCTTGGAAAGTGGTCGGGGCGTTGGTTAGTCCAAACGGCATAACAAGGAATTCATAGTGGCCTTCGTGAGTGCGAAAAGCCGTCTTCGGAATATCTTTATCAATCATTCTTATTTGATGGTATCCTGACTTGAGGTCTATTTTTGAGAATATCGTTGCCCCATTTAACTCGTCAAATAGTTCTTCAGCTACTGGTATTGGGAACTTGTCTGGAATTGTGGCGTTGTTCACTGTTCGGTAATCGACACAAAAACGCCAGCTGCCATCTTTCTTTTTAACTAGTAGTACAGGGCTTGAGAAGAGGCTATTGCTTGGTCTGATGATGCCTGAAGCTAGCATTTCTTCTACTAATCTTTCCATTTCTGCCTTTTGTTGAAACCCATATCTATAGGGTCTAACGTTTATTGGATCGGTTCCTTCTTTGAGATGTATTTGGTGTTCTATTCCTCTTCTTGGCGGCAATCTTTCCGGCCAGTCAAATACATCTTCGAACTGTTTCAGCACGTTTTGCAGGGGTTCATCTGATGGTTGTTGCTGCTGTGCTGCTTTGTTCATTTTCTGTATGAACTTGTACTGCCCTGCATTTAATTAAGAATCCTTCATCTTGTTCAGCCCAGGTCTTGATCATACTTTTAAGGCTAATGCGTGATTTAGTGAGGCTGGGGTCTCCTTTTATTAAGATCTGTTTTCCCTCACTAGAGAATGTAAGTGTGAGGTTTTTCCAGTCGACTACTGTTATTCCGAGCGAGTGGAGCCATTGCATACCTAGTACGACATCCACTCCTCCGAGTTCTAATGGTACAAATTCTTCCTTCACTTTCCAATTGGATAGTTGGATTTCCACGTTTTCACATATTCCCTTACCTTGTACTGCTGTTCCGGATCCAAGTATAACACCGTAGTGGCCGGTTTCCTTGACAGGTAATTGTAGTGATTCCACTAATTTTTCAGAGATGAAGTTGTGGGTGGCTCCACAATCTATAAGGATGATCACTTCCCTCTCTTGGATTTTCTCTTTGACCTTCATCGTGCCCGGATCATTCAGCCCAACAACAGAGTTTAGAGATAATTCGGCAAAGGTCTTTTGCTTTTCTTCTTCTTGCGGTGATTCTAGTGTTTTTTCTTCAGCGGCGTTTTCCTCAATGATCTCGTATTCCTCGCCTTCTTTTTTCACAACAAACATTTTCAGTTCGCGTAATTCTTTCATTTTGCATCGATGATCCGCTGAATATTTTTCGTTGCATCTAAAGCATAGTCCTTTTTCCTTCTGGGCCTGGAATTCTGCGTCGGGTAATCTTCTTGAGTTGCCATCTTTACAAATTTCGGCATTATTAGAGCTCCTCAAAGTGATAGTTCGCATGGGAAAGTTAGTATTCGTCTTGCTATCGCTGTTGGTGTTTGCCGGCGTTCTGCTGTTCACTGTGTTTTGCTGAGAATATTTCCCGCCTGCGAAATTATTCAAATTTGCCTCGTTGCGCTCGATTTCTCTGTTTTCGACTAATTGCGCGAATTCCATCGTCTTAGCTAATCTTTTGGGTCGACAGATTCTTACTTCCGCTCTTATCCATGGGAACAAACCATTCATGAAGGTGTCTTCGACGACTGGGTCTGGAACATCACTTAATGGTGCGACGAGTTTGTCGAACAAATTTCGATAATCGTCGACTGTGGATTCTTGCTTAACTCGTAAGAACCGTCCCAATACTGTTCCGTCTCGGCTTGATTTGAACCTCACTAACAGTCTTTCTTTCAAGTTTGCCCAGCTGGTGAACTTCTATCTTTCTTCTTGCGATCGGTACCAATTCAAGGCAGGGCCGTCGAAGCTGATCGTGGAAACTAACATTTTCTCAGAATCAGATAGTTTATGGATCTGAAAGTACCTTTCGGCTCTGAAGAGCCATGAGTCTGGATCTTCTTCGGCGAACACGGGCATTTCTACTTTCTTGAATTTATTCCGGTCGGCTGCGGCTTCTTTGGTCTCTGTTTTTCCTTCATTTCGGTCGTCGGAGTTGCTTCGTCCCGATATGGCCGATTTGCTGGAGTTTGCTTCTTTTTCCTTTCCCTTATTTGTCACAGACATGTGCGCATTGGGTTCCTCATTACGTTCGCTGGTGGTAGTTCGATCCTTGGCTATAGTTTCCATTATCATCAGCATCATCTGTTCTTGTTTGTCCGATTGGGTACGCATCGTCTGCATATTTTTCGCGATATCGTTCAGTGTTAATTCGATGGTCGGCATCTTTCCGAGCTCTTTCTTTATCAATGCTATTTCTTGATCCATTACTTCAAGTCGTTCTTCGATCCTCGTCTGCACCATCTTGTCGGATCACGGGCTCTGATACTAATTTGATAGAACTCCGGCCAAGTAAGCTGAACGAACTCTTCTTTTATTAGAATCAGTAACAAACACACAGAATTGATGAGGTATCAATTCTGCCACAAGCTCTTGATCTTGCTTCTCAAGAATCAAGTACAACTTCTTCACTAAATTTCTGATGATCTTCTTCTATCATTACTCCCCTATTTATACACATTTTCTTAACACATTTAACATGTGTTTTCTAACTAATTTCTAACTAATCTGTTAACTGCTTTCCTAACTAATTCTGTTGTAGCTTATTTCTTCTTTGGTAAACTAACTTGATTGGAGGTCTAACACATGGATGCTGAAGTTTTATCTCATGATAAGCGTAACTCTTGCTGGTGCTGTCTGTGCCCTGTGACTGTGAGTTAGGCGACCAGGTTATCTAAATTGGAAGAGTAACTGAGGTGCATACGACAATGATGCTGGGATGATGAGAAAGTAGCATGTACCAGCTCCGAGGAATTTGCAAGTTTCCACAACCTTGATCGGAGGCTCCACCTTTTTTTGGCTTTTTCCTTTGTTTTTTATTTTGGGTGCTGATAAAGGGCGAGTAACTATTGAAATGGATTACCCTCCATCTCTCAGGTTGAAATTCATAGTTAATTATTGTAAAGAAATGTAGAATGCTGTTGAAGTGTATTTCAAAGATGTGGCA

mRNA sequence

CACAGATGAAAGATTGTAGACTTGGTAGGGTTATTTCCGACCATTTCCTCAATCCCCTTCGCTCACAGCCAAACCACCGCCGCCAAATCCGCCACCACTTCAATCCTCGAACACTTGAAAGAGGGTCGCTTCCGAAGAGCTGTCTTATCCTGTTTGATTTCCCATTTCCCTTTCTACATCCTCTCTACTCTCCATTCTCCCAAATTTGCTCTTCCACTCGGCCCCACTCAAGAGTCGCCATTGTCTACTTCACCTAAGTTCCGTTCTTCATAGCACAACCGTACTTATATGCACCTCCAGCTAAACAAACTTCTTGGTGCGCACAAGGCTTTGCTTTCTCATTACTCTTCTCTGATACGCCAGTGTTTAGTTGTTGGATCTGTTCACAATGCCAAAACAATCCACGCTCAATTGCTAAAGCTTGGCCTTGACAGCAATACTTTTCTGGGCAATCATTGTCTTCAGCTATATACGCTATTTGGTCCTGTCCATGACGTATTGAAAGCATTTGATGGGATTAAAGATAAGAATATTATATCCTGGAACATATGCTTAAAGGGTATGTTTAGATTTGGCGACGTCGATGCTCCCCGTCACCTGTTCGATGTAATGCCTGAGAGGGACATTGTTTCTTGGAACACTATGATTTCTGGCTACGTTTCATCTGGATTTGCTAAGAGTGCAATGGGCATTTCTCTGGAAATGCAAAATGCTGGTTTTAGACCAAGTGAGTATACCTTCTCCATTTTGCTTTCACTTGTGTCGTCTGCTTTTCATGGTAAGCAAGTTCATGGCAGTATGATACGAAGTGGTGTGGATGTATCAAGTATGGTGCTTGGGAATTCATTGATTGATATGTATGGAAAAGTTGGCCTTGTTGATTATATGTTTGTCATATTTTCTAGTATGGAAAAGGTGGATGTTATCTCTTGGAATTCTTTGATTTTAGGCTGTCATAGATCAGGCTTTAGAGTATTGGCACTCAATCAGTTCTTTCTAATGAGAACCACTGAGCACTCACCTGATCAGTTCACTATATCAATGGTGATCAGTATCTGCTGTTGCCTCCAAGAGTTGGAACTGGTTTGAAGGTTGCAGTGCAGCTTTTTGAAGATACCAATCAATTGGATCGAGTTCTTTGTAATGTCATGATCTCAAGTTTTGCATGGCATGGTCATTGGAGGGATTCCATGTGGCTTTTTGTGTATACCTTAAGAGAGAACCTTGGGCCAATTGACACTACACTGAGCAGTGTGCTGAGCTCCGTTTCAGTTTTCACACCTGTGGAGTTGGGCAGTCAAATTCATAATTTGGTTCTTAAGTTAGGTTTTGAGTTTGATGTCATTGTGGCTAGTTCGCTGGTAGACATGTATGCTAAAGTTGGATCAATTGATGATGCCATGAAAGTCTTTATAGATATGCCCTTTAGAGATTTGATATCTTGGAACACTATGATTATGGGTCTGGTTGACAATGGTAAATACTTTGAGGCCCTACACACTTTTAATAAATTGGTCATGGAAGGTGTACTGCCAGATAGGATAACACTAGCCGGAGTCTTATTAGCTTGCAGTTATGCTGGTTTTGTTGAGGAAGGGTTAGGCATCTTCTCTACAATGACATATGAACATGGAGTTGTGCCAAGCAATGAACATTATTCTTGTGTTGTGAACTTGCTGAGTCGGGCTGGTAAATTTGAAGAAGCAGTTAATATTATCAAAACAACACCGTACCAACCTACTTCTACATTTTGGACGTCACTTCTTGGTGTTTGTGCAATTCATGGAGACCTAAAAATCATTGAAAAAGTTGCAGAGTGGGTGATGAAGCTGGAACCACAATCATCCCTACCATATTCAGTGCTGGCTCAAGCATATGCGATGAGATGTCAATGGGAAAGCATGGTTCGTGTCAAGAATACTTGGGAGAATATAGCTGCACAAAAGGTGAAGGCTTGCAGCTGGATTGTGACAAAAGATTGTGCGTATGCTTTCGAGGATGACCAATTACAGCTTCTGTTGAGAGAAAATTTCATTTCAGTGTTGGAATTAATTATCTGGGAGATTGAATATGGGATTGACTATGAACAGTATCTGGAAATAATACATTAAAATTGTTTTGTGATATTGATTATGTGAACCTCAAATTTATCGAATTCTTAATACCCAAGGGCCAACATCTCAATCTTTGGGGTTGTGGACTCTCTGACAATCACACTGAACGGATGCTCCCAGACTGTTCTTAGGAACTTGTGGATGAGACATGGTAAACGTATTGTGCTTGGAATCCTTCATAGAGTGCCTCATTGGATTAAGTTTTTTCTGGATTTGAAGATACTGTTTCCTCTTTGGTGCAAATCTGATGCCCTGTTAAGAGATTAGCAGCTTTGTTTTGATGTTCAGCGACTATTCTCTTTGCATTTGTGTGGGTTTGCAATGGTGGGATACCAATTGAAAGCATTTGCAGTGACGTTTGCTGGAACTAACCTTTGTGCAATGGAAGATGAAGTTTGGAAGAAAACTGATACATACATATTCATGCTTCAAGAGACTGGAGAGACGTGAAGATGATTATCCAATTTTTGCTATTGGCCACTGAAGAGCAATTCATGTTTAAGAGCTCAACGTGAAGAAGATAGGGTCTTGATCTACCCAGCATATTGAATCAATCTCATAATCCTCATCAAGTCAAGCCATTCACTAACTAAGCTGCCAAGACGTGCTTAGTGGAATTGTAGCGAGTTCATTGAGGTGCTGTAAATGGGTTCATAGCATGCTGGAAGAAGGATAATCTGTGTTCTGTAATTCCAACACTACAACAAACTTGGTGATACTTTGTGTTTCTACTTGAAGGGTGAGGGGATTTAGTTTTAGTTGCCTTTGTTGGTACATAGCACAACCCACTGATTATTTATTCTTTGACATAAATATTCATAAACTATATGATATGATTCTAATTGAAAATAGGGCAAGAACTGACCATACAATTGACAAATATTCTGATGATCAATAGGTCACTTTGGTGCTAATAACTTTGTAGAAATGATACTGTAGTGTGTGAAAGATCGTATTGTATAAAAAAAATCTTATTGATGCATATATCATTATATCCTATTTCTATTCCATGCATTCTCGGTAAGATAATCTGGTTTTTCTTTTAAATGCTCTGATTCTTTCTAGGGTCTTTGTAAGCTCTTGTTCCTCTCATAGGTTTGATTACTAATAGTAGAAAAAACTAATCGGTTTTTGTGTTACTGGGGAGATAAACTAAAACACAAATCGATGGATGACGTGCACTAAGCAGACTGTTCTCTCCATCAAAAGCTTTTTGTTCTGAAGTAGCTCTCAGGATAGCTCATCTGCACAATGCAACGGACCAGTTTGTCTGCTAGGCTAGTAGTAGCATGTCTATAGAGCAAGCATTGGATCCCGGGTCATCTTCTTGGTGTGAAAGAAATAGGCGACCAGGTTATCTAAATTGGAAGAGTAACTGAGGTGCATACGACAATGATGCTGGGATGATGAGAAAGTAGCATGTACCAGCTCCGAGGAATTTGCAAGTTTCCACAACCTTGATCGGAGGCTCCACCTTTTTTTGGCTTTTTCCTTTGTTTTTTATTTTGGGTGCTGATAAAGGGCGAGTAACTATTGAAATGGATTACCCTCCATCTCTCAGGTTGAAATTCATAGTTAATTATTGTAAAGAAATGTAGAATGCTGTTGAAGTGTATTTCAAAGATGTGGCA

Coding sequence (CDS)

ATGATCTCAAGTTTTGCATGGCATGGTCATTGGAGGGATTCCATGTGGCTTTTTGTGTATACCTTAAGAGAGAACCTTGGGCCAATTGACACTACACTGAGCAGTGTGCTGAGCTCCGTTTCAGTTTTCACACCTGTGGAGTTGGGCAGTCAAATTCATAATTTGGTTCTTAAGTTAGGTTTTGAGTTTGATGTCATTGTGGCTAGTTCGCTGGTAGACATGTATGCTAAAGTTGGATCAATTGATGATGCCATGAAAGTCTTTATAGATATGCCCTTTAGAGATTTGATATCTTGGAACACTATGATTATGGGTCTGGTTGACAATGGTAAATACTTTGAGGCCCTACACACTTTTAATAAATTGGTCATGGAAGGTGTACTGCCAGATAGGATAACACTAGCCGGAGTCTTATTAGCTTGCAGTTATGCTGGTTTTGTTGAGGAAGGGTTAGGCATCTTCTCTACAATGACATATGAACATGGAGTTGTGCCAAGCAATGAACATTATTCTTGTGTTGTGAACTTGCTGAGTCGGGCTGGTAAATTTGAAGAAGCAGTTAATATTATCAAAACAACACCGTACCAACCTACTTCTACATTTTGGACGTCACTTCTTGGTGTTTGTGCAATTCATGGAGACCTAAAAATCATTGAAAAAGTTGCAGAGTGGGTGATGAAGCTGGAACCACAATCATCCCTACCATATTCAGTGCTGGCTCAAGCATATGCGATGAGATGTCAATGGGAAAGCATGGTTCGTGTCAAGAATACTTGGGAGAATATAGCTGCACAAAAGGTGAAGGCTTGCAGCTGGATTGTGACAAAAGATTGTGCGTATGCTTTCGAGGATGACCAATTACAGCTTCTGTTGAGAGAAAATTTCATTTCAGTGTTGGAATTAATTATCTGGGAGATTGAATATGGGATTGACTATGAACAGTATCTGGAAATAATACATTAA

Protein sequence

MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLGFEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFNKLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRAGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLAQAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRENFISVLELIIWEIEYGIDYEQYLEIIH

Homology

[Close]

BLAST of IVF0004111 vs. ExPASy Swiss-Prot
Match: Q9LP03 (Pentatricopeptide repeat-containing protein At1g43980, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E58 PE=3 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 2.4e-64
Identity = 126/306 (41.18%), Postives = 194/306 (63.40%), Query Frame = 0


Query: 1   MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 60
           MI S++WH    D++ LF+  + +++ P   T SSVLSS++    ++ G+ +H+LV+KLG
Sbjct: 319 MIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNA-VMLDHGADVHSLVIKLG 378

Query: 61  FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 120
           F+ D  VA+SL++MY K GS+D AM VF     +DLI WNT+IMGL  N +  E+L  FN
Sbjct: 379 FDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFN 438

Query: 121 KLVM-EGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSR 180
           +L+M + + PDR+TL G+L+AC YAGFV EG+ IFS+M   HGV P NEHY+C++ LL R
Sbjct: 439 QLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCR 498

Query: 181 AGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVL 240
            G   EA +I    P++P+S  W  +L      GD ++ E VA+ +++ EP+SS PY VL
Sbjct: 499 VGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVL 558

Query: 241 AQAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRENFISVL 300
            + Y M  +WE+ V+++        +  +  S I  +   ++FE DQLQ+    +  ++L
Sbjct: 559 IKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSFEADQLQIHGGHDTCALL 618

Query: 301 ELIIWE 306
           +L+ W+
Sbjct: 619 DLLSWD 623

[Close]

BLAST of IVF0004111 vs. ExPASy Swiss-Prot
Match: Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 2.6e-55
Identity = 116/320 (36.25%), Postives = 183/320 (57.19%), Query Frame = 0


Query: 1   MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 60
           +I+ +  +G   +++ LF    RE++ P   + +++L + +    + LG Q H  VLK G
Sbjct: 357 LIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHG 416

Query: 61  FEF------DVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFE 120
           F+F      D+ V +SL+DMY K G +++   VF  M  RD +SWN MI+G   NG   E
Sbjct: 417 FKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNE 476

Query: 121 ALHTFNKLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVV 180
           AL  F +++  G  PD IT+ GVL AC +AGFVEEG   FS+MT + GV P  +HY+C+V
Sbjct: 477 ALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMV 536

Query: 181 NLLSRAGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSL 240
           +LL RAG  EEA ++I+  P QP S  W SLL  C +H ++ + + VAE ++++EP +S 
Sbjct: 537 DLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSG 596

Query: 241 PYSVLAQAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLREN 300
           PY +L+  YA   +WE ++ V+ +       K   CSWI  +   + F         ++ 
Sbjct: 597 PYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQ 656

Query: 301 FISVLELIIWEIEYGIDYEQ 315
             S+L+++I E+    D+ +
Sbjct: 657 IHSLLDILIAEMRPEQDHTE 676

[Close]

BLAST of IVF0004111 vs. ExPASy Swiss-Prot
Match: Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 7.4e-50
Identity = 107/323 (33.13%), Postives = 185/323 (57.28%), Query Frame = 0


Query: 1   MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 60
           MI+ ++  GH  +++ LFV   RE      ++ SS LS+ +    +ELG Q+H  ++K G
Sbjct: 380 MIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGG 439

Query: 61  FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 120
           +E    V ++L+ MY K GSI++A  +F +M  +D++SWNTMI G   +G    AL  F 
Sbjct: 440 YETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFE 499

Query: 121 KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA 180
            +  EG+ PD  T+  VL ACS+ G V++G   F TMT ++GV+P+++HY+C+V+LL RA
Sbjct: 500 SMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRA 559

Query: 181 GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA 240
           G  E+A N++K  P++P +  W +LLG   +HG+ ++ E  A+ +  +EP++S  Y +L+
Sbjct: 560 GLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLS 619

Query: 241 QAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAF--------EDDQLQLLLR 300
             YA   +W  + +++    +   +KV   SWI  ++  + F        E D++   L 
Sbjct: 620 NLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLE 679

Query: 301 E--------NFISVLELIIWEIE 308
           E         ++S   +++ ++E
Sbjct: 680 ELDLRMKKAGYVSKTSVVLHDVE 702

[Close]

BLAST of IVF0004111 vs. ExPASy Swiss-Prot
Match: Q9FK93 (Pentatricopeptide repeat-containing protein At5g39680 OS=Arabidopsis thaliana OX=3702 GN=EMB2744 PE=1 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 9.7e-50
Identity = 101/278 (36.33%), Postives = 170/278 (61.15%), Query Frame = 0


Query: 11  WRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLGFEFDVIVASS 70
           + +++ LF     + + P + T + +L+S++  + ++ G  +H LVLK G+   V+V ++
Sbjct: 319 FEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNA 378

Query: 71  LVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFNKLVMEGVLPD 130
           LV+MYAK GSI+DA K F  M FRD+++WNTMI G   +G   EAL  F++++  G +P+
Sbjct: 379 LVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPN 438

Query: 131 RITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRAGKFEEAVNII 190
           RIT  GVL ACS+ GFVE+GL  F+ +  +  V P  +HY+C+V LLS+AG F++A + +
Sbjct: 439 RITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFM 498

Query: 191 KTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLAQAYAMRCQWE 250
           +T P +     W +LL  C +  + ++ +KVAE+ ++  P  S  Y +L+  +A   +WE
Sbjct: 499 RTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWE 558

Query: 251 SMVRVKNTWENIAAQKVKACSWIVTKDCAYAF--EDDQ 287
            + +V++   N   +K    SWI  ++  + F  ED+Q
Sbjct: 559 GVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQ 596

[Close]

BLAST of IVF0004111 vs. ExPASy Swiss-Prot
Match: Q9CAA8 (Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H22 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 6.3e-49
Identity = 103/302 (34.11%), Postives = 169/302 (55.96%), Query Frame = 0


Query: 1   MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 60
           M+  +   G   +++ +F+   R  + P   TL   +S+ +  + +E GSQ H   +  G
Sbjct: 342 MVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSG 401

Query: 61  FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 120
               V V++SLV +Y K G IDD+ ++F +M  RD +SW  M+      G+  E +  F+
Sbjct: 402 LIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFD 461

Query: 121 KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA 180
           K+V  G+ PD +TL GV+ ACS AG VE+G   F  MT E+G+VPS  HYSC+++L SR+
Sbjct: 462 KMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRS 521

Query: 181 GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA 240
           G+ EEA+  I   P+ P +  WT+LL  C   G+L+I +  AE +++L+P     Y++L+
Sbjct: 522 GRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLS 581

Query: 241 QAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFE-DDQLQLLLRENFISVL 300
             YA + +W+S+ +++        +K    SWI  K   ++F  DD+    L + +  + 
Sbjct: 582 SIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLE 641

Query: 301 EL 302
           EL
Sbjct: 642 EL 643

[Close]

BLAST of IVF0004111 vs. ExPASy TrEMBL
Match: A0A1S3B3Q8 (pentatricopeptide repeat-containing protein At1g43980, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485665 PE=4 SV=1)

HSP 1 Score: 648.3 bits (1671), Expect = 1.7e-182
Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 0


Query: 1   MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 60
           MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG
Sbjct: 319 MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 378

Query: 61  FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 120
           FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN
Sbjct: 379 FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 438

Query: 121 KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA 180
           KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA
Sbjct: 439 KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA 498

Query: 181 GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA 240
           GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA
Sbjct: 499 GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA 558

Query: 241 QAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRENFISVLE 300
           QAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRENFISVLE
Sbjct: 559 QAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRENFISVLE 618

Query: 301 LIIWEIEYGIDYEQYLEIIH 321
           LIIWEIEYGIDYEQYLEIIH
Sbjct: 619 LIIWEIEYGIDYEQYLEIIH 638

[Close]

BLAST of IVF0004111 vs. ExPASy TrEMBL
Match: A0A1S4DUP9 (pentatricopeptide repeat-containing protein At1g43980, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485665 PE=4 SV=1)

HSP 1 Score: 648.3 bits (1671), Expect = 1.7e-182
Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 0


Query: 1   MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 60
           MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG
Sbjct: 245 MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 304

Query: 61  FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 120
           FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN
Sbjct: 305 FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 364

Query: 121 KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA 180
           KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA
Sbjct: 365 KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA 424

Query: 181 GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA 240
           GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA
Sbjct: 425 GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA 484

Query: 241 QAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRENFISVLE 300
           QAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRENFISVLE
Sbjct: 485 QAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRENFISVLE 544

Query: 301 LIIWEIEYGIDYEQYLEIIH 321
           LIIWEIEYGIDYEQYLEIIH
Sbjct: 545 LIIWEIEYGIDYEQYLEIIH 564

[Close]

BLAST of IVF0004111 vs. ExPASy TrEMBL
Match: A0A5D3DK49 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G001070 PE=4 SV=1)

HSP 1 Score: 637.1 bits (1642), Expect = 3.9e-179
Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 0


Query: 1   MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 60
           MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG
Sbjct: 319 MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 378

Query: 61  FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 120
           FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN
Sbjct: 379 FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 438

Query: 121 KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA 180
           KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA
Sbjct: 439 KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA 498

Query: 181 GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA 240
           GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA
Sbjct: 499 GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA 558

Query: 241 QAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRENFISVLE 300
           QAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRENFISVLE
Sbjct: 559 QAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRENFISVLE 618

Query: 301 LIIWEIEYGIDYEQ 315
           LIIWEIEYGIDYEQ
Sbjct: 619 LIIWEIEYGIDYEQ 632

[Close]

BLAST of IVF0004111 vs. ExPASy TrEMBL
Match: A0A0A0KIE7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G344300 PE=4 SV=1)

HSP 1 Score: 607.1 bits (1564), Expect = 4.3e-170
Identity = 301/320 (94.06%), Postives = 307/320 (95.94%), Query Frame = 0


Query: 1   MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 60
           MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSS+SVFTPVELGSQIHNLVLKLG
Sbjct: 1   MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSISVFTPVELGSQIHNLVLKLG 60

Query: 61  FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 120
           F+ DVIV SSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN
Sbjct: 61  FQSDVIVTSSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 120

Query: 121 KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA 180
           KLVMEGVLPDRITLAGVLLACSYAG VEEGL IFS MTYEHGVVP NEHYSCVVNLLSRA
Sbjct: 121 KLVMEGVLPDRITLAGVLLACSYAGLVEEGLVIFSKMTYEHGVVPRNEHYSCVVNLLSRA 180

Query: 181 GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA 240
           GKFEEAVNIIKTT YQPTSTFWTSLLGVCAIHGDLKIIEKVAEW+MKLEPQSSLPYSVLA
Sbjct: 181 GKFEEAVNIIKTTLYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWMMKLEPQSSLPYSVLA 240

Query: 241 QAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRENFISVLE 300
           QAYAMRCQWESMVRVK TWENIA QKVKACSWIVTKD AYAF+DDQLQLL REN ISVLE
Sbjct: 241 QAYAMRCQWESMVRVKKTWENIATQKVKACSWIVTKDYAYAFQDDQLQLLSRENIISVLE 300

Query: 301 LIIWEIEYGIDYEQYLEIIH 321
           LIIWEIEYGID+EQ +EIIH
Sbjct: 301 LIIWEIEYGIDHEQCMEIIH 320

[Close]

BLAST of IVF0004111 vs. ExPASy TrEMBL
Match: A0A6J1GNQ4 (pentatricopeptide repeat-containing protein At1g43980, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111456079 PE=4 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 5.0e-134
Identity = 242/316 (76.58%), Postives = 271/316 (85.76%), Query Frame = 0


Query: 1   MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 60
           MISS AWHGHWRDSMWLFVY LRENL P   TLSSVLSS+SVFTP++LGSQIHNLVLKLG
Sbjct: 319 MISSLAWHGHWRDSMWLFVYALRENLRPTGITLSSVLSSISVFTPLDLGSQIHNLVLKLG 378

Query: 61  FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 120
           FE D +V SSLV+MYAKVG ID+AMKVF DMP RDLISWNTMIMGLV+NGKYFEAL T  
Sbjct: 379 FESDTVVTSSLVEMYAKVGLIDNAMKVFTDMPSRDLISWNTMIMGLVNNGKYFEALGTLE 438

Query: 121 KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA 180
            LV EGV+ DRITLAGVLLACS+AGFV+EGL IFSTM  +HGVVP+NEHY+CVV+LLSRA
Sbjct: 439 NLVREGVVADRITLAGVLLACSHAGFVDEGLNIFSTMENKHGVVPTNEHYTCVVDLLSRA 498

Query: 181 GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA 240
           GKF+EAVNII+TT  QPTSTFW SLL  CAIHGD+  IE+VAE VMKLEPQSSLPYSVLA
Sbjct: 499 GKFKEAVNIIETTSCQPTSTFWISLLDACAIHGDMNTIERVAERVMKLEPQSSLPYSVLA 558

Query: 241 QAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRENFISVLE 300
           + YA R +WES VRV    ENIAAQKVKACSW+V KD  YAF+DD+LQ L  E+FIS LE
Sbjct: 559 RVYAARGRWESTVRVSKAMENIAAQKVKACSWVVIKDHVYAFQDDRLQHLGGESFISALE 618

Query: 301 LIIWEIEYGIDYEQYL 317
           LI+WE+EYG ++EQY+
Sbjct: 619 LIVWEVEYGNEHEQYV 634

[Close]

BLAST of IVF0004111 vs. NCBI nr
Match: XP_016899445.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 648 bits (1672), Expect = 6.73e-231
Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 0


Query: 1   MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 60
           MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG
Sbjct: 245 MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 304

Query: 61  FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 120
           FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN
Sbjct: 305 FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 364

Query: 121 KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA 180
           KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA
Sbjct: 365 KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA 424

Query: 181 GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA 240
           GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA
Sbjct: 425 GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA 484

Query: 241 QAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRENFISVLE 300
           QAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRENFISVLE
Sbjct: 485 QAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRENFISVLE 544

Query: 301 LIIWEIEYGIDYEQYLEIIH 320
           LIIWEIEYGIDYEQYLEIIH
Sbjct: 545 LIIWEIEYGIDYEQYLEIIH 564

[Close]

BLAST of IVF0004111 vs. NCBI nr
Match: XP_008441580.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial isoform X1 [Cucumis melo] >XP_008441581.1 PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial isoform X1 [Cucumis melo] >XP_016899443.1 PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial isoform X1 [Cucumis melo] >XP_016899444.1 PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 648 bits (1672), Expect = 8.96e-230
Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 0


Query: 1   MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 60
           MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG
Sbjct: 319 MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 378

Query: 61  FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 120
           FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN
Sbjct: 379 FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 438

Query: 121 KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA 180
           KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA
Sbjct: 439 KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA 498

Query: 181 GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA 240
           GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA
Sbjct: 499 GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA 558

Query: 241 QAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRENFISVLE 300
           QAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRENFISVLE
Sbjct: 559 QAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRENFISVLE 618

Query: 301 LIIWEIEYGIDYEQYLEIIH 320
           LIIWEIEYGIDYEQYLEIIH
Sbjct: 619 LIIWEIEYGIDYEQYLEIIH 638

[Close]

BLAST of IVF0004111 vs. NCBI nr
Match: TYK23780.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 637 bits (1644), Expect = 4.00e-224
Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 0


Query: 1   MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 60
           MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG
Sbjct: 319 MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 378

Query: 61  FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 120
           FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN
Sbjct: 379 FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 438

Query: 121 KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA 180
           KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA
Sbjct: 439 KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA 498

Query: 181 GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA 240
           GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA
Sbjct: 499 GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA 558

Query: 241 QAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRENFISVLE 300
           QAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRENFISVLE
Sbjct: 559 QAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRENFISVLE 618

Query: 301 LIIWEIEYGIDYEQ 314
           LIIWEIEYGIDYEQ
Sbjct: 619 LIIWEIEYGIDYEQ 632

[Close]

BLAST of IVF0004111 vs. NCBI nr
Match: XP_011657317.1 (pentatricopeptide repeat-containing protein At1g43980, mitochondrial [Cucumis sativus] >XP_031743516.1 pentatricopeptide repeat-containing protein At1g43980, mitochondrial [Cucumis sativus] >XP_031743517.1 pentatricopeptide repeat-containing protein At1g43980, mitochondrial [Cucumis sativus] >XP_031743518.1 pentatricopeptide repeat-containing protein At1g43980, mitochondrial [Cucumis sativus] >XP_031743519.1 pentatricopeptide repeat-containing protein At1g43980, mitochondrial [Cucumis sativus] >XP_031743520.1 pentatricopeptide repeat-containing protein At1g43980, mitochondrial [Cucumis sativus] >KAE8647194.1 hypothetical protein Csa_019030 [Cucumis sativus])

HSP 1 Score: 607 bits (1565), Expect = 1.60e-213
Identity = 301/320 (94.06%), Postives = 307/320 (95.94%), Query Frame = 0


Query: 1   MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 60
           MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSS+SVFTPVELGSQIHNLVLKLG
Sbjct: 319 MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSISVFTPVELGSQIHNLVLKLG 378

Query: 61  FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 120
           F+ DVIV SSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN
Sbjct: 379 FQSDVIVTSSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 438

Query: 121 KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA 180
           KLVMEGVLPDRITLAGVLLACSYAG VEEGL IFS MTYEHGVVP NEHYSCVVNLLSRA
Sbjct: 439 KLVMEGVLPDRITLAGVLLACSYAGLVEEGLVIFSKMTYEHGVVPRNEHYSCVVNLLSRA 498

Query: 181 GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA 240
           GKFEEAVNIIKTT YQPTSTFWTSLLGVCAIHGDLKIIEKVAEW+MKLEPQSSLPYSVLA
Sbjct: 499 GKFEEAVNIIKTTLYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWMMKLEPQSSLPYSVLA 558

Query: 241 QAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRENFISVLE 300
           QAYAMRCQWESMVRVK TWENIA QKVKACSWIVTKD AYAF+DDQLQLL REN ISVLE
Sbjct: 559 QAYAMRCQWESMVRVKKTWENIATQKVKACSWIVTKDYAYAFQDDQLQLLSRENIISVLE 618

Query: 301 LIIWEIEYGIDYEQYLEIIH 320
           LIIWEIEYGID+EQ +EIIH
Sbjct: 619 LIIWEIEYGIDHEQCMEIIH 638

[Close]

BLAST of IVF0004111 vs. NCBI nr
Match: XP_038884751.1 (pentatricopeptide repeat-containing protein At1g43980, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 550 bits (1417), Expect = 5.28e-196
Identity = 276/314 (87.90%), Postives = 289/314 (92.04%), Query Frame = 0


Query: 1   MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 60
           MISSFAWHG WRDSMWLFVY LR+NLGPI+ TLSSVLSS+SVFTPVELGSQIHNLVLKLG
Sbjct: 1   MISSFAWHGRWRDSMWLFVYALRDNLGPIEITLSSVLSSISVFTPVELGSQIHNLVLKLG 60

Query: 61  FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 120
           FE D IV SSLVDMYAKVGSID AMKVF+DMP RDLISWNTMIMGLV+NGKYF+ALHTFN
Sbjct: 61  FESDAIVTSSLVDMYAKVGSIDSAMKVFVDMPVRDLISWNTMIMGLVNNGKYFDALHTFN 120

Query: 121 KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA 180
           KLV EGVL DRITLAGVLLACSYAGFVEEGL IFSTMTYEHG+VP NEHYSCVVNLLS A
Sbjct: 121 KLVKEGVLADRITLAGVLLACSYAGFVEEGLVIFSTMTYEHGIVPRNEHYSCVVNLLSWA 180

Query: 181 GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA 240
           GKFEEAVNIIKTTP QPTSTFWTSLLGVCAIHGDLK+IE+VAE VMKLEPQSSLPYSVLA
Sbjct: 181 GKFEEAVNIIKTTPCQPTSTFWTSLLGVCAIHGDLKVIERVAERVMKLEPQSSLPYSVLA 240

Query: 241 QAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRENFISVLE 300
           QAYAMR +WES VRV+ TWENIAAQKVK CSWIVTKD AYAFEDDQLQ L RE  ISVLE
Sbjct: 241 QAYAMRGRWESTVRVRKTWENIAAQKVKGCSWIVTKDYAYAFEDDQLQHLWRE--ISVLE 300

Query: 301 LIIWEIEYGIDYEQ 314
           LIIWE+EYGI Y+Q
Sbjct: 301 LIIWEVEYGIVYDQ 312

[Close]

BLAST of IVF0004111 vs. TAIR 10
Match: AT1G43980.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 247.3 bits (630), Expect = 1.7e-65
Identity = 126/306 (41.18%), Postives = 194/306 (63.40%), Query Frame = 0


Query: 1   MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 60
           MI S++WH    D++ LF+  + +++ P   T SSVLSS++    ++ G+ +H+LV+KLG
Sbjct: 307 MIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNA-VMLDHGADVHSLVIKLG 366

Query: 61  FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 120
           F+ D  VA+SL++MY K GS+D AM VF     +DLI WNT+IMGL  N +  E+L  FN
Sbjct: 367 FDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFN 426

Query: 121 KLVM-EGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSR 180
           +L+M + + PDR+TL G+L+AC YAGFV EG+ IFS+M   HGV P NEHY+C++ LL R
Sbjct: 427 QLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCR 486

Query: 181 AGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVL 240
            G   EA +I    P++P+S  W  +L      GD ++ E VA+ +++ EP+SS PY VL
Sbjct: 487 VGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVL 546

Query: 241 AQAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLRENFISVL 300
            + Y M  +WE+ V+++        +  +  S I  +   ++FE DQLQ+    +  ++L
Sbjct: 547 IKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSFEADQLQIHGGHDTCALL 606

Query: 301 ELIIWE 306
           +L+ W+
Sbjct: 607 DLLSWD 611

[Close]

BLAST of IVF0004111 vs. TAIR 10
Match: AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 217.2 bits (552), Expect = 1.9e-56
Identity = 116/320 (36.25%), Postives = 183/320 (57.19%), Query Frame = 0


Query: 1   MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 60
           +I+ +  +G   +++ LF    RE++ P   + +++L + +    + LG Q H  VLK G
Sbjct: 357 LIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHG 416

Query: 61  FEF------DVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFE 120
           F+F      D+ V +SL+DMY K G +++   VF  M  RD +SWN MI+G   NG   E
Sbjct: 417 FKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNE 476

Query: 121 ALHTFNKLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVV 180
           AL  F +++  G  PD IT+ GVL AC +AGFVEEG   FS+MT + GV P  +HY+C+V
Sbjct: 477 ALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMV 536

Query: 181 NLLSRAGKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSL 240
           +LL RAG  EEA ++I+  P QP S  W SLL  C +H ++ + + VAE ++++EP +S 
Sbjct: 537 DLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSG 596

Query: 241 PYSVLAQAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFEDDQLQLLLREN 300
           PY +L+  YA   +WE ++ V+ +       K   CSWI  +   + F         ++ 
Sbjct: 597 PYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQ 656

Query: 301 FISVLELIIWEIEYGIDYEQ 315
             S+L+++I E+    D+ +
Sbjct: 657 IHSLLDILIAEMRPEQDHTE 676

[Close]

BLAST of IVF0004111 vs. TAIR 10
Match: AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 199.1 bits (505), Expect = 5.3e-51
Identity = 107/323 (33.13%), Postives = 185/323 (57.28%), Query Frame = 0


Query: 1   MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 60
           MI+ ++  GH  +++ LFV   RE      ++ SS LS+ +    +ELG Q+H  ++K G
Sbjct: 380 MIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGG 439

Query: 61  FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 120
           +E    V ++L+ MY K GSI++A  +F +M  +D++SWNTMI G   +G    AL  F 
Sbjct: 440 YETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFE 499

Query: 121 KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA 180
            +  EG+ PD  T+  VL ACS+ G V++G   F TMT ++GV+P+++HY+C+V+LL RA
Sbjct: 500 SMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRA 559

Query: 181 GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA 240
           G  E+A N++K  P++P +  W +LLG   +HG+ ++ E  A+ +  +EP++S  Y +L+
Sbjct: 560 GLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLS 619

Query: 241 QAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAF--------EDDQLQLLLR 300
             YA   +W  + +++    +   +KV   SWI  ++  + F        E D++   L 
Sbjct: 620 NLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLE 679

Query: 301 E--------NFISVLELIIWEIE 308
           E         ++S   +++ ++E
Sbjct: 680 ELDLRMKKAGYVSKTSVVLHDVE 702

[Close]

BLAST of IVF0004111 vs. TAIR 10
Match: AT5G39680.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 198.7 bits (504), Expect = 6.9e-51
Identity = 101/278 (36.33%), Postives = 170/278 (61.15%), Query Frame = 0


Query: 11  WRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLGFEFDVIVASS 70
           + +++ LF     + + P + T + +L+S++  + ++ G  +H LVLK G+   V+V ++
Sbjct: 319 FEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNA 378

Query: 71  LVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFNKLVMEGVLPD 130
           LV+MYAK GSI+DA K F  M FRD+++WNTMI G   +G   EAL  F++++  G +P+
Sbjct: 379 LVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPN 438

Query: 131 RITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRAGKFEEAVNII 190
           RIT  GVL ACS+ GFVE+GL  F+ +  +  V P  +HY+C+V LLS+AG F++A + +
Sbjct: 439 RITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFM 498

Query: 191 KTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLAQAYAMRCQWE 250
           +T P +     W +LL  C +  + ++ +KVAE+ ++  P  S  Y +L+  +A   +WE
Sbjct: 499 RTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWE 558

Query: 251 SMVRVKNTWENIAAQKVKACSWIVTKDCAYAF--EDDQ 287
            + +V++   N   +K    SWI  ++  + F  ED+Q
Sbjct: 559 GVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQ 596

[Close]

BLAST of IVF0004111 vs. TAIR 10
Match: AT1G68930.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 196.1 bits (497), Expect = 4.4e-50
Identity = 103/302 (34.11%), Postives = 169/302 (55.96%), Query Frame = 0


Query: 1   MISSFAWHGHWRDSMWLFVYTLRENLGPIDTTLSSVLSSVSVFTPVELGSQIHNLVLKLG 60
           M+  +   G   +++ +F+   R  + P   TL   +S+ +  + +E GSQ H   +  G
Sbjct: 342 MVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSG 401

Query: 61  FEFDVIVASSLVDMYAKVGSIDDAMKVFIDMPFRDLISWNTMIMGLVDNGKYFEALHTFN 120
               V V++SLV +Y K G IDD+ ++F +M  RD +SW  M+      G+  E +  F+
Sbjct: 402 LIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFD 461

Query: 121 KLVMEGVLPDRITLAGVLLACSYAGFVEEGLGIFSTMTYEHGVVPSNEHYSCVVNLLSRA 180
           K+V  G+ PD +TL GV+ ACS AG VE+G   F  MT E+G+VPS  HYSC+++L SR+
Sbjct: 462 KMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRS 521

Query: 181 GKFEEAVNIIKTTPYQPTSTFWTSLLGVCAIHGDLKIIEKVAEWVMKLEPQSSLPYSVLA 240
           G+ EEA+  I   P+ P +  WT+LL  C   G+L+I +  AE +++L+P     Y++L+
Sbjct: 522 GRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLS 581

Query: 241 QAYAMRCQWESMVRVKNTWENIAAQKVKACSWIVTKDCAYAFE-DDQLQLLLRENFISVL 300
             YA + +W+S+ +++        +K    SWI  K   ++F  DD+    L + +  + 
Sbjct: 582 SIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLE 641

Query: 301 EL 302
           EL
Sbjct: 642 EL 643

The following BLAST results are available for this feature:

BLAST of IVF0004111 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LP03	2.4e-64	41.18	Pentatricopeptide repeat-containing protein At1g43980, mitochondrial OS=Arabidop...	[more]
Q9SIT7	2.6e-55	36.25	Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX...	[more]
Q9SY02	7.4e-50	33.13	Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX...	[more]
Q9FK93	9.7e-50	36.33	Pentatricopeptide repeat-containing protein At5g39680 OS=Arabidopsis thaliana OX...	[more]
Q9CAA8	6.3e-49	34.11	Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis th...	[more]

BLAST of IVF0004111 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B3Q8	1.7e-182	100.00	pentatricopeptide repeat-containing protein At1g43980, mitochondrial isoform X1 ...	[more]
A0A1S4DUP9	1.7e-182	100.00	pentatricopeptide repeat-containing protein At1g43980, mitochondrial isoform X2 ...	[more]
A0A5D3DK49	3.9e-179	100.00	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A0A0KIE7	4.3e-170	94.06	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G344300 PE=4 SV=1	[more]
A0A6J1GNQ4	5.0e-134	76.58	pentatricopeptide repeat-containing protein At1g43980, mitochondrial OS=Cucurbit...	[more]

BLAST of IVF0004111 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016899445.1	6.73e-231	100.00	PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial ...	[more]
XP_008441580.1	8.96e-230	100.00	PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial ...	[more]
TYK23780.1	4.00e-224	100.00	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_011657317.1	1.60e-213	94.06	pentatricopeptide repeat-containing protein At1g43980, mitochondrial [Cucumis sa...	[more]
XP_038884751.1	5.28e-196	87.90	pentatricopeptide repeat-containing protein At1g43980, mitochondrial-like [Benin...	[more]

BLAST of IVF0004111 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G43980.1	1.7e-65	41.18	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G13600.1	1.9e-56	36.25	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G02750.1	5.3e-51	33.13	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G39680.1	6.9e-51	36.33	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G68930.1	4.4e-50	34.11	pentatricopeptide (PPR) repeat-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 97..130 e-value: 7.2E-6 score: 23.9
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 169..191 e-value: 0.1 score: 12.9 coord: 97..127 e-value: 1.1E-5 score: 25.3 coord: 69..92 e-value: 0.0048 score: 17.0
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 95..129 score: 10.709248
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 44..146 e-value: 9.3E-19 score: 69.5
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 147..295 e-value: 5.6E-11 score: 44.4
None	No IPR available	PANTHER	PTHR24015:SF1740	OS03G0435200 PROTEIN	coord: 1..309
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 1..309

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0004111.3	IVF0004111.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding