IVF0004087 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTGAACGAAACGACGTCGTGACCTTTTGGGAGCTTCATTGTTCGTGAGGAAGCGCAGAAACCCATTTCAAGAGGGATCTCATCATGAAAGGGGAAGTTCTAAGCGCCTACAGATCGTTGCTCAGGGCAACCAAAAAGTCCTTCGCCGGCGACACCTTGATGCTGACCGAGTCGGCCTCCGAGATACGCCGGAAGTTTCAAGAGAGCCGCCACGTGACCTCCGAGGCTGAGATTCGGAAACTGCTCGAAGAAGCTCGGGAGGCCTCCCATTTCATCTCCAATATGATCGTTCAGGCCAAGCGTACTTCTCGCGGCGGCTATGGTATTCTTCTTTTCTATTTTGAGATTCATTTTCAGTGTTTTTAACCACTAATCTAACAATTGGCCAATCGGATATTGAATTTGAAATGAACGCATGGCAGCCTACATGTTTGATAAAATGCTTCACCCAAAATTTTCCGCTTTTTATTTACTGAAAGCTAGTGGGTTCGTAGGAAAACGCTGAAACTATTGATTACTCTTCTGGAGTTACTTGGTTTTTAATTCTACTTGGCCGGTGTTTATGAAGACTTAGATTGAGAATGCGTGAACTGTATCGTAGAACAGATTATAGAAACACGAGTTTGTGCGATCTAGATTTTTGTTTACTTAACTTGGATAGCAGTGTTCCTTTTCCTTTCTTGAGTTCAATAAAGAGTGAGGATTCAAACATCATACGTCCAAAGGAGATTATCAATGCCTTAACCTATTGATACATTCTCAAGTTGGATGGGGTGTTTACAGTAAACTCACAAATTGGGATAAAATAAACCCGTATTTGAAACAGAAGTTTGTGTTCTTAACTTTGAATTATACAAACCCATCCTAGGAATCAAATACCTTTCAAGCTTCTAACTTTAGAACTCAAGGACACCGTTATACAACCTACAGAACAGATGAAGGTCAACCTTTTAAGGTTCTAACTTAACGTGCCAAACTTCCTAAAATTTTTCTTTCTCGATCCTTGTAAATAAAATCTAAGAGCCAAACATTAATTTTGGTTATTGCTGCAGAAATGAAACCGAGTAAAGATCATGCTGGTGCAACACTAGAAGTTCCTTCTGAAGAGCTTCTACGCAAATCTAAATGAGGAGGTGAGATGATGGATGCTGACTTCCAATTTGACAATTGTTTTAACTTTCAGCTATTTGCTCTTGCCCTAGGAGGATCTTGGAAAAAATTTCTGTTTCCTTTTGTTGGTCCATTTCATATCCATATTTATTTGTGCTCAGTTAAATGTACTTGGTTGGTATGGTTCTTGCAGGGCTAATGAAAGTCCCAATCTTATACCTTTTATTCCAATTTGATGGATCGAGAAAGTTGGACTCAAAAGTCAAATTTTGGCTTACAACTTTTTTTAGTGAATGAAATTTTCTAGAATGATTTTTTCAAGAAGCCTGGCGTTATTAGTAAGAGAAACAATCATCTTTACTGGGATGGATGATTGAACCTTCAACCTTTAGAAAGGAAGGTTATTTTTAATTATTGTTGTCACCTTGGGTTTCAAGTCATTTCCATTAAGTTCACCTTCTATGATATAGGAACCAAACGTTTGTATTTGGAGTCTACTTAATGTTGGGGAAAATGGCCAACCAAGCCCATTGAGTGCTCTACCTTGGACAATCAACACATATCCTCAAGCTAAAATATATGTGATATTGGTTACCCTTCTGTTTGTTTTGGAAAATGTGTGGTAGAATAAACTTCTTTTCTACCTTTCATTTTTACATTAATTTTGACATGAAATGTTGGCTATAGTATTTAGCAAGTTAGAATAGGGG CTTGAACGAAACGACGTCGTGACCTTTTGGGAGCTTCATTGTTCGTGAGGAAGCGCAGAAACCCATTTCAAGAGGGATCTCATCATGAAAGGGGAAGTTCTAAGCGCCTACAGATCGTTGCTCAGGGCAACCAAAAAGTCCTTCGCCGGCGACACCTTGATGCTGACCGAGTCGGCCTCCGAGATACGCCGGAAGTTTCAAGAGAGCCGCCACGTGACCTCCGAGGCTGAGATTCGGAAACTGCTCGAAGAAGCTCGGGAGGCCTCCCATTTCATCTCCAATATGATCGTTCAGGCCAAGCGTACTTCTCGCGGCGGCTATGAAATGAAACCGAGTAAAGATCATGCTGGTGCAACACTAGAAGTTCCTTCTGAAGAGCTTCTACGCAAATCTAAATGAGGAGGGCTAATGAAAGTCCCAATCTTATACCTTTTATTCCAATTTGATGGATCGAGAAAGTTGGACTCAAAAGTCAAATTTTGGCTTACAACTTTTTTTAGTGAATGAAATTTTCTAGAATGATTTTTTCAAGAAGCCTGGCGTTATTAGTAAGAGAAACAATCATCTTTACTGGGATGGATGATTGAACCTTCAACCTTTAGAAAGGAAGGTTATTTTTAATTATTGTTGTCACCTTGGGTTTCAAGTCATTTCCATTAAGTTCACCTTCTATGATATAGGAACCAAACGTTTGTATTTGGAGTCTACTTAATGTTGGGGAAAATGGCCAACCAAGCCCATTGAGTGCTCTACCTTGGACAATCAACACATATCCTCAAGCTAAAATATATGTGATATTGGTTACCCTTCTGTTTGTTTTGGAAAATGTGTGGTAGAATAAACTTCTTTTCTACCTTTCATTTTTACATTAATTTTGACATGAAATGTTGGCTATAGTATTTAGCAAGTTAGAATAGGGG ATGAAAGGGGAAGTTCTAAGCGCCTACAGATCGTTGCTCAGGGCAACCAAAAAGTCCTTCGCCGGCGACACCTTGATGCTGACCGAGTCGGCCTCCGAGATACGCCGGAAGTTTCAAGAGAGCCGCCACGTGACCTCCGAGGCTGAGATTCGGAAACTGCTCGAAGAAGCTCGGGAGGCCTCCCATTTCATCTCCAATATGATCGTTCAGGCCAAGCGTACTTCTCGCGGCGGCTATGAAATGAAACCGAGTAAAGATCATGCTGGTGCAACACTAGAAGTTCCTTCTGAAGAGCTTCTACGCAAATCTAAATGA MKGEVLSAYRSLLRATKKSFAGDTLMLTESASEIRRKFQESRHVTSEAEIRKLLEEAREASHFISNMIVQAKRTSRGGYEMKPSKDHAGATLEVPSEELLRKSK Homology
BLAST of IVF0004087 vs. ExPASy Swiss-Prot
Match: C4Y4R9 (Mitochondrial zinc maintenance protein 1, mitochondrial OS=Clavispora lusitaniae (strain ATCC 42720) OX=306902 GN=MZM1 PE=3 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 5.8e-04 Identity = 32/104 (30.77%), Postives = 53/104 (50.96%), Query Frame = 0
BLAST of IVF0004087 vs. ExPASy TrEMBL
Match: A0A1S3BYH1 (mitochondrial zinc maintenance protein 1, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494771 PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 2.9e-46 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0
BLAST of IVF0004087 vs. ExPASy TrEMBL
Match: A0A0A0KY80 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001780 PE=4 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 3.5e-44 Identity = 100/104 (96.15%), Postives = 102/104 (98.08%), Query Frame = 0
BLAST of IVF0004087 vs. ExPASy TrEMBL
Match: A0A6J1DPV6 (mitochondrial zinc maintenance protein 1, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111022436 PE=4 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 1.1e-42 Identity = 96/103 (93.20%), Postives = 101/103 (98.06%), Query Frame = 0
BLAST of IVF0004087 vs. ExPASy TrEMBL
Match: A0A6J1GAU2 (mitochondrial zinc maintenance protein 1, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111452487 PE=4 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 2.1e-41 Identity = 93/104 (89.42%), Postives = 101/104 (97.12%), Query Frame = 0
BLAST of IVF0004087 vs. ExPASy TrEMBL
Match: A0A6J1KH11 (mitochondrial zinc maintenance protein 1, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111493140 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 1.8e-40 Identity = 92/104 (88.46%), Postives = 100/104 (96.15%), Query Frame = 0
BLAST of IVF0004087 vs. NCBI nr
Match: XP_008454342.1 (PREDICTED: mitochondrial zinc maintenance protein 1, mitochondrial [Cucumis melo]) HSP 1 Score: 194 bits (492), Expect = 5.32e-62 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0
BLAST of IVF0004087 vs. NCBI nr
Match: XP_038905396.1 (mitochondrial zinc maintenance protein 1, mitochondrial [Benincasa hispida]) HSP 1 Score: 187 bits (474), Expect = 2.96e-59 Identity = 99/103 (96.12%), Postives = 102/103 (99.03%), Query Frame = 0
BLAST of IVF0004087 vs. NCBI nr
Match: XP_004152250.1 (mitochondrial zinc maintenance protein 1, mitochondrial [Cucumis sativus] >KGN52811.1 hypothetical protein Csa_014848 [Cucumis sativus]) HSP 1 Score: 187 bits (474), Expect = 2.96e-59 Identity = 100/104 (96.15%), Postives = 102/104 (98.08%), Query Frame = 0
BLAST of IVF0004087 vs. NCBI nr
Match: XP_022155304.1 (mitochondrial zinc maintenance protein 1, mitochondrial [Momordica charantia]) HSP 1 Score: 182 bits (462), Expect = 2.00e-57 Identity = 96/103 (93.20%), Postives = 101/103 (98.06%), Query Frame = 0
BLAST of IVF0004087 vs. NCBI nr
Match: XP_022949021.1 (mitochondrial zinc maintenance protein 1, mitochondrial [Cucurbita moschata] >XP_023524456.1 mitochondrial zinc maintenance protein 1, mitochondrial [Cucurbita pepo subsp. pepo]) HSP 1 Score: 177 bits (450), Expect = 1.40e-55 Identity = 93/104 (89.42%), Postives = 101/104 (97.12%), Query Frame = 0
BLAST of IVF0004087 vs. TAIR 10
Match: AT3G62810.1 (complex 1 family protein / LVR family protein ) HSP 1 Score: 136.7 bits (343), Expect = 1.0e-32 Identity = 73/100 (73.00%), Postives = 85/100 (85.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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