IVF0004033 (gene) Melon (IVF77) v1

Overview
NameIVF0004033
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionProtein EMSY-LIKE 3 isoform X2
Locationchr05: 1395343 .. 1395582 (-)
RNA-Seq ExpressionIVF0004033
SyntenyIVF0004033
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGAGCTCGATTTTTCGGTGCTGGAGGATGTTGCTCCGTCGGGCGCCGTGGGTCTCCGTCTGCAAGGGTGTAAAAGAACGGCCAGTCGCTACTGTAGAAGAGCAGCAAACAGTCGTCAATAGTGTAGATGCGGCACGGGTCGCTGGTCGGAGTCGCACTGATGACTGCTGGCGGCGGAGGGTATGGAGGGTCTATGGAGAATCGCCGGAGTTGAAGAAGAAACACAGGCGGCTGTAA

mRNA sequence

ATGTGGAGCTCGATTTTTCGGTGCTGGAGGATGTTGCTCCGTCGGGCGCCGTGGGTCTCCGTCTGCAAGGGTGTAAAAGAACGGCCAGTCGCTACTGTAGAAGAGCAGCAAACAGTCGTCAATAGTGTAGATGCGGCACGGGTCGCTGGTCGGAGTCGCACTGATGACTGCTGGCGGCGGAGGGTATGGAGGGTCTATGGAGAATCGCCGGAGTTGAAGAAGAAACACAGGCGGCTGTAA

Coding sequence (CDS)

ATGTGGAGCTCGATTTTTCGGTGCTGGAGGATGTTGCTCCGTCGGGCGCCGTGGGTCTCCGTCTGCAAGGGTGTAAAAGAACGGCCAGTCGCTACTGTAGAAGAGCAGCAAACAGTCGTCAATAGTGTAGATGCGGCACGGGTCGCTGGTCGGAGTCGCACTGATGACTGCTGGCGGCGGAGGGTATGGAGGGTCTATGGAGAATCGCCGGAGTTGAAGAAGAAACACAGGCGGCTGTAA

Protein sequence

MWSSIFRCWRMLLRRAPWVSVCKGVKERPVATVEEQQTVVNSVDAARVAGRSRTDDCWRRRVWRVYGESPELKKKHRRL
Homology
[Close]
BLAST of IVF0004033 vs. ExPASy TrEMBL
Match: A0A5D3BAX0 (Dihydropyrimidinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00660 PE=3 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 3.7e-38
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1  MWSSIFRCWRMLLRRAPWVSVCKGVKERPVATVEEQQTVVNSVDAARVAGRSRTDDCWRR 60
          MWSSIFRCWRMLLRRAPWVSVCKGVKERPVATVEEQQTVVNSVDAARVAGRSRTDDCWRR
Sbjct: 1  MWSSIFRCWRMLLRRAPWVSVCKGVKERPVATVEEQQTVVNSVDAARVAGRSRTDDCWRR 60

Query: 61 RVWRVYGESPELKKKHRRL 80
          RVWRVYGESPELKKKHRRL
Sbjct: 61 RVWRVYGESPELKKKHRRL 79

[Close]
BLAST of IVF0004033 vs. ExPASy TrEMBL
Match: A0A5A7V0Q1 (Dihydropyrimidinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G001400 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.1e-37
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1  MWSSIFRCWRMLLRRAPWVSVCKGVKERPVATVEEQQTVVNSVDAARVAGRSRTDDCWRR 60
          MWSSIFRCWRMLLRRAPWVSVCKGVKE+PVATVEEQQTVVNSVDAARVAGRSRTDDCWRR
Sbjct: 1  MWSSIFRCWRMLLRRAPWVSVCKGVKEQPVATVEEQQTVVNSVDAARVAGRSRTDDCWRR 60

Query: 61 RVWRVYGESPELKKKHRRL 80
          RVWRVYGESPELKKKHRRL
Sbjct: 61 RVWRVYGESPELKKKHRRL 79

[Close]
BLAST of IVF0004033 vs. ExPASy TrEMBL
Match: A0A5A7UUE7 (Protein EMSY-LIKE 3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G001300 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 3.3e-26
Identity = 62/76 (81.58%), Postives = 67/76 (88.16%), Query Frame = 0 

Query: 1  MWSSIFRCWRMLLRRAPWVSVCKGVKERPVATVEEQQTVVNSVDAARVAGRSRTDDCWRR 60
          MWSS FRCWRML RRAPWVSVCKGV+E+ VA VE+QQTVVNS+ AARVAGRS TDDCW R
Sbjct: 1  MWSSWFRCWRMLRRRAPWVSVCKGVEEQLVAIVEKQQTVVNSLGAARVAGRSLTDDCWWR 60

Query: 61 RVWRVYGESPELKKKH 77
          RV+ VY ESPELKKKH
Sbjct: 61 RVYWVYRESPELKKKH 76

[Close]
BLAST of IVF0004033 vs. ExPASy TrEMBL
Match: A0A5D3CES2 (Protein EMSY-LIKE 3 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001160 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 3.3e-26
Identity = 62/76 (81.58%), Postives = 67/76 (88.16%), Query Frame = 0 

Query: 1  MWSSIFRCWRMLLRRAPWVSVCKGVKERPVATVEEQQTVVNSVDAARVAGRSRTDDCWRR 60
          MWSS FRCWRML RRAPWVSVCKGV+E+ VA VE+QQTVVNS+ AARVAGRS TDDCW R
Sbjct: 1  MWSSWFRCWRMLRRRAPWVSVCKGVEEQLVAIVEKQQTVVNSLGAARVAGRSLTDDCWWR 60

Query: 61 RVWRVYGESPELKKKH 77
          RV+ VY ESPELKKKH
Sbjct: 61 RVYWVYRESPELKKKH 76

[Close]
BLAST of IVF0004033 vs. NCBI nr
Match: TYJ96104.1 (dihydropyrimidinase [Cucumis melo var. makuwa])

HSP 1 Score: 168 bits (425), Expect = 6.84e-47
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1  MWSSIFRCWRMLLRRAPWVSVCKGVKERPVATVEEQQTVVNSVDAARVAGRSRTDDCWRR 60
          MWSSIFRCWRMLLRRAPWVSVCKGVKERPVATVEEQQTVVNSVDAARVAGRSRTDDCWRR
Sbjct: 1  MWSSIFRCWRMLLRRAPWVSVCKGVKERPVATVEEQQTVVNSVDAARVAGRSRTDDCWRR 60

Query: 61 RVWRVYGESPELKKKHRRL 79
          RVWRVYGESPELKKKHRRL
Sbjct: 61 RVWRVYGESPELKKKHRRL 79

[Close]
BLAST of IVF0004033 vs. NCBI nr
Match: KAA0061762.1 (dihydropyrimidinase [Cucumis melo var. makuwa])

HSP 1 Score: 166 bits (421), Expect = 2.42e-46
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1  MWSSIFRCWRMLLRRAPWVSVCKGVKERPVATVEEQQTVVNSVDAARVAGRSRTDDCWRR 60
          MWSSIFRCWRMLLRRAPWVSVCKGVKE+PVATVEEQQTVVNSVDAARVAGRSRTDDCWRR
Sbjct: 1  MWSSIFRCWRMLLRRAPWVSVCKGVKEQPVATVEEQQTVVNSVDAARVAGRSRTDDCWRR 60

Query: 61 RVWRVYGESPELKKKHRRL 79
          RVWRVYGESPELKKKHRRL
Sbjct: 61 RVWRVYGESPELKKKHRRL 79

[Close]
BLAST of IVF0004033 vs. NCBI nr
Match: TYK10467.1 (protein EMSY-LIKE 3 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 128 bits (321), Expect = 1.51e-32
Identity = 62/76 (81.58%), Postives = 67/76 (88.16%), Query Frame = 0 

Query: 1  MWSSIFRCWRMLLRRAPWVSVCKGVKERPVATVEEQQTVVNSVDAARVAGRSRTDDCWRR 60
          MWSS FRCWRML RRAPWVSVCKGV+E+ VA VE+QQTVVNS+ AARVAGRS TDDCW R
Sbjct: 1  MWSSWFRCWRMLRRRAPWVSVCKGVEEQLVAIVEKQQTVVNSLGAARVAGRSLTDDCWWR 60

Query: 61 RVWRVYGESPELKKKH 76
          RV+ VY ESPELKKKH
Sbjct: 61 RVYWVYRESPELKKKH 76

[Close]
BLAST of IVF0004033 vs. NCBI nr
Match: KAA0058660.1 (protein EMSY-LIKE 3 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 128 bits (321), Expect = 1.83e-32
Identity = 62/76 (81.58%), Postives = 67/76 (88.16%), Query Frame = 0 

Query: 1  MWSSIFRCWRMLLRRAPWVSVCKGVKERPVATVEEQQTVVNSVDAARVAGRSRTDDCWRR 60
          MWSS FRCWRML RRAPWVSVCKGV+E+ VA VE+QQTVVNS+ AARVAGRS TDDCW R
Sbjct: 1  MWSSWFRCWRMLRRRAPWVSVCKGVEEQLVAIVEKQQTVVNSLGAARVAGRSLTDDCWWR 60

Query: 61 RVWRVYGESPELKKKH 76
          RV+ VY ESPELKKKH
Sbjct: 61 RVYWVYRESPELKKKH 76

The following BLAST results are available for this feature:
BLAST of IVF0004033 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0004033 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BAX03.7e-38100.00Dihydropyrimidinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G... [more]
A0A5A7V0Q11.1e-3798.73Dihydropyrimidinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G... [more]
A0A5A7UUE73.3e-2681.58Protein EMSY-LIKE 3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... [more]
A0A5D3CES23.3e-2681.58Protein EMSY-LIKE 3 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
BLAST of IVF0004033 vs. NCBI nr
Match NameE-valueIdentityDescription
TYJ96104.16.84e-47100.00dihydropyrimidinase [Cucumis melo var. makuwa][more]
KAA0061762.12.42e-4698.73dihydropyrimidinase [Cucumis melo var. makuwa][more]
TYK10467.11.51e-3281.58protein EMSY-LIKE 3 isoform X2 [Cucumis melo var. makuwa][more]
KAA0058660.11.83e-3281.58protein EMSY-LIKE 3 isoform X1 [Cucumis melo var. makuwa][more]
BLAST of IVF0004033 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0004033.1IVF0004033.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0050832 defense response to fungus
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
molecular_function GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds