IVF0004028 (gene) Melon (IVF77) v1

Overview
NameIVF0004028
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag/pol protein
Locationchr10: 21322661 .. 21327993 (-)
RNA-Seq ExpressionIVF0004028
SyntenyIVF0004028
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACGGACGGCTCCCGCGGCTCGGCTCGGCGGCACTTGTACGGACGACTCGGTTGTACGGACAGCTCGGTTCGGCTCGGTTGTACGGACGGCTCGGCTCGGCGGTACGGACGGCTCGATTCGCTCGGCTGTACGGACGGCTCGGTCGGTCGGCTCGGTTCGACCCGTTTTTTCATATGGTGCCGGTTCAAGTGGTTTTGGGCCGGTTCTTCATATTTTAGGCCGGTTCAAGCATTTTTTAGCCGGTTTGAAGTTTTTTGAAGGTTTTGAGGCCGGTTTTGGAGCTTTGAAAGCACTTTTAGGATTTTTTAAGGCTTTATTATTGTAATTATTGCTTTATTTTATCCTAGAGGCCAATTTTACAGGTTCAAATGTTATTTAATGCTTTATGGATGTCATTTAGATAAATCCCACCTTAGGTTAAGCATGTTCATGCATTTTTATATATTATAAATGTTATAATGTATGGTTTTAATGCATGATTATGAATTTCATGAGTAATTTAAAATATGTTGATATTTTAAATATATGAAATTGAATAAGCATGATGCATGACATTACTTAGTTAAATATAATTTGTTATATTTAAATTAATGTATTGTGTATGCTTGATTGATTTTCATATTTTTTAATATAATTGTTATATTAATAAAAGATGAAAATTAATTTGCATTGTGCATATTACATCCATAGTTTAATATAATTGTTATATTAATATAATGTATGCATGTAATATGGTTTTATTTAATTATAATTTGATTTTAATTATTTAAACCATAGTATGCATGATTATAGGGCTAATTAACTAATTTTATAATAGTTATAAAATTTGATTATTAGAAACCGTCAACCTATAATAAAGAGTTGCATGCAAACATAGGATCTTAGGATTAATTTGGTTTAATTTTAAATTGTTTAAAATTAAATAGACCTAAGATCACATTAATTCTAATAGGATTAGAATTAAGTCTTATTTTTAGTTTAATGAAACTAAATAGGACAAATAGGATTTAAGGTTATAAGGGAACTCCACCGGTAAAGTTCTGTCTAAGGCTGGGGGTACTTAAGTTGACGGTTTACGGAACACCTCCTACCTGGGAACTGACCCGGAACCGGCGTTGAATTAACCTTATTCCTATTAGCATAAGATGTCACTAGGTAAATTAAATGGTTTAATACACCTAGAAACTTTAGTGTAAAGTTTTATTATAAGTGTTATAATAAGAATAGACTTAGTTAGATTCATTTAGCCGGAATTTAGCTAAGTGCAACTAAACCTAAATTAATAGAACATTTTAGTGGGAGAAAAATGGTATATATGATATATCAATTTTTTTTTTTGCTTTCACGTCCCTAAGAGTTCACACGTGAGATCCATACTCGGCTTCGTGTCGCCCTGGGCGCGGCCTCCTTTCGGAAAGTGTTTGTATGGGTCAATAACAAGGTGAATAGGGGAAATGTTCATAGTAAGTGGGAGAAGGACGCGTGTCAACGTATCCTACGGTCTCCTCCATTAGGTTGCACCGTGAGATTTCTATGATCCGCCTGCGTGTCGTCCTGGAGCGACCATCCCTTCGAGGGCTTGATCATATAAGTCGGAACATCGCAAACTCCAGAAATGGATAGGATTTCTTAGGTTAATCTTCAACAGTTGTCTTTCCTAACGGTAGCCTGTTGAAGCGTACCTCTGGGATCTGAAAATGGTAGGGTCACACTTACGGGATGAATTAAGTTAGTTAATGAATCCTTGACCGAACAACGATAGCTAAGAACTATAGGAATAAGAGTTATTCTGGTATTAGTAATTAGTTGAGATTGTCTCAATTCAGAAGAAGAGTAATTGATCACCCTTCGGTGATTTTTGTTCTAAACTTCTGAAGTATCGTTGCAAAAACTAAATCATTAGTTTTATTAGGGTTCTTTGATTGTTTGTTTTTGCTGAATTGATTGGATTGTTTTATGTAATGGGTTAAGACAAAGATAACTAATATGGTCAATTGTTTGCTATTTCAGCATGTCTTCCTCAATTATTGCATTGCTTAAAAAAGATCAATTAACCGGTGAAAATTATGCGACGTGGAAATCGAAACTGAATATGATTCTAGTTATCGCTGATCTAAGCTTCGTCTTAATGGAGGAATGTCCTCCTTTCCCCACTAAACATGCATCCCAAAGTGTTAGGGATGCATATGACCGTTGGACAAAGGCCAATGACAAGGCTCGCCTCCACATCTTGGCTAGTATGTCTGACATACTAAGCAAGAAACATGAGATCATGGTCACTGCACGTCAGATCATGGACTCTCTTAGAGAGATGTTTGGACAACCGTCCATTCAGATCAAACAAGAGGCAAATGTTGCCCATTCTAAGAGGAGGTTTGTACCTTCACCTTCTGGATCTGAGAAAATTCAAAAGAGGAAAGAAGGGAAAGGGAAAGGTCCTACTATTGCTGTTGAGGACAAAGGGAAGGCTAAGGTAGCCATCAAGAGGAAATGTTTTCACTGCAATGTTGATGAGCATTGGAAAACAAATTGCCCTAAGTACCTTGTTAAGAAGAAAGAAAAGGAAGGTAAATATGATTTACTTGTCTTGGAAACATGTTTAGTGGAAAATGACCAAAATGCCTGGATACTTGATTCAGGGGCCACTAACCATGTTTGTTCTTCTTTACAAGAAACTAGTTCCTTCAAGCAGCTTGAGGACAGTGAGATGACACTCAAGGTTGGAACGGGAGATGTCATTTCAGCTCGTGCAGTGGGAGATGCTAAGTTGTTTTTCGAAAATAAATTCATGTTTTTGGAAAACTTGTACATAGTTCCTAAAATTAAAAGGAACTTAGTTTCCGTTTCTTGTCTTATTGAACATATGTACTCAATTAATTTTTCTATGAATGAAGCGTTCATTTATAAGAATGGTGTACATATTTGTTCAGCTAAGCTTGAAAACAACTTGTATGTATTAAGACCTAATGAAGCAAAAGCAGTTTTAAATCATGAGATGTTTAGAACTGCTAATACTCAAAATAAAAGGCAAAGAATTTCTCCAAATAACAATACCTATCTTTGGCATTTAAGATTAGGTCACATAAATCTCGATCGGATCGGGAGATTGGTAAAGAATGGACTTCTAAACAAGTTAAAAGATGTTTCATTACCTCCATGTGAATCTTGTCTTGAAGGTAAAATGACAAAGAGACCTTTTACTGGAAAAGGTTATAGAGCCAAAGAGCCTTTAGAACTTATACATTCAGACCTCTGTGGTCCGATGAATGTAAAAGCTAGAGGGGGTTTTGAATACTTCATCTCTTTTATAGATGATTATTCTAGGTATGGTTATTTATACTTAATGGAGCATAAGTCTGAAGCTCTTGAAAAGTTCAAGGAGTATAAGACTGAAGTTGAAAATCTATTAAGTAAAAAGATTAAAATACTTCGATCTGATCGAGGTGGAGAGTACATGGATTTGAGATTTCAGGACTATATGATAGAACATGGAATCCAATCCCAACTCTCAGCACCTGGTACACCTCAACAAAATGGTGTATCAGAGAGGAGAAATAGAACCTTGTTAGACATGGTTCGTTCAATGATGAGTTACGCTCAATTGCCTAGCTCGTTTTGGGGGTATGCAGTAGAGACTGCAGTTCATATCTTGAACAATGTTCCCTCGAAGAGTGTTTCTGAAACACCTTTCGAGCTATGGAGAGGACGTAAACCTAGTTTAAGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTATTAGTGACAAATCCCAAGAAGTTGGAACCTCGTTCAAGGTTATGCCAATTTGTTGGTTACCCTAAAGAGACGAGAGGTGGTCTATTCTTTGATCCACAAGAAAATAGAGTGTTTGTATCGACAAATGCTACTTTCTTGGAAGAAGACCACATGAGAAATCATAAACCACGAAGCAAATTAGTATTAAGTGAAGCTACTGATGAATCAACAAGGGTTGTTGATGAAGTTGGTCCCTCATCAAGGGTTGATGAAACCACCACATCAGGTCAATCTCATCCTTCTCAATCGTTGAGAATGCCTCGACGCAGTGGGAGGGTTGTATCACAACCTAACCGCTATTTGGGTTTAACTGAAACTCAAGTTGTCATACCAGATGATGGTGTTGAGGATCCATTGTCCTATAAACAGGCAATGAATGATGTAGATAAGGACCAATGGGTCAAAGCCATGGACCTTGAAATGGAGTCTATGTACTTCAATTCAGTGTGGGAGCTTGTAGATCTACCTGAAGGGGTAAAACCTATAGGGTGCAAATGGATCTATAAGAGAAAGAGAGATTCAGCTGGGAAGGTACAGACCTTTAAAGCTAGACTTGTGGCAAAAGGGTATACCCAAAGGGAAGGGGTTGACTATGAGGAAACTTTCTCTCCTGTTGCTATGTTAAAGTCTATAAGGATTCTCTTGTCCATCGCCACATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTCTGAATGGCAATCTTGAAGAGAGTATCTTTATGTCTCAGCCCGAGGGGTTCATAACCCAAGGTCAAGAGCAAAAAGTTTGCAAGCTGAATCGATCCATTTATGGGTTGAAACAAGCATCAAGATCTTGGAACATTAGGTTTGATACTGCGATCAAATCCTATGGTTTTGACCAGAATGTTGATGAACCTTGTGTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAGTACTTTATGTGGACGATATCCTCCTCATTGGGAATGATGTGGGTTACCTTACTGACGTTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGGAGAGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTGTCTCAAGCAACCTATATCGACAAATTGTTGGTTCGATATTCGATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGGAGTTCACTTGTCTAAGGAACAGAGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGCCTCAGCTGTGGGCAGCTTAATGTATGCTATGCTCTGCACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTAGGTATCAGTCCAACCCAGGGTTAGACCATTGGACGGCGGTTAAAATTATTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTCTGATTTCCAAACCGATAAGGATTCTAGGAAATCCACATCGGGATCAGTGTTCACCCTAAATGGGGAGCTGTAG

mRNA sequence

ATGTACGGACGGCTCCCGCGGCTCGGCTCGGCGGCACTTGTACGGACGACTCGGTTGTACGGACAGCTCGGTTCGGCTCGGTTGTACGGACGGCTCGGCTCGGCGGTACGGACGGCTCGATTCGCTCGGCTGTACGGACGGCTCGGTCGGTCGGCTCGGTTCGACCCGTTTTTTCATATGGTGCCGGTTCAAGTGGTTTTGGGCCGCATGTCTTCCTCAATTATTGCATTGCTTAAAAAAGATCAATTAACCGGTGAAAATTATGCGACGTGGAAATCGAAACTGAATATGATTCTAGTTATCGCTGATCTAAGCTTCGTCTTAATGGAGGAATGTCCTCCTTTCCCCACTAAACATGCATCCCAAAGTGTTAGGGATGCATATGACCGTTGGACAAAGGCCAATGACAAGGCTCGCCTCCACATCTTGGCTAGTATGTCTGACATACTAAGCAAGAAACATGAGATCATGGTCACTGCACGTCAGATCATGGACTCTCTTAGAGAGATGTTTGGACAACCGTCCATTCAGATCAAACAAGAGGCAAATGTTGCCCATTCTAAGAGGAGGTTTGTACCTTCACCTTCTGGATCTGAGAAAATTCAAAAGAGGAAAGAAGGGAAAGGGAAAGGTCCTACTATTGCTGTTGAGGACAAAGGGAAGGCTAAGGTAGCCATCAAGAGGAAATGTTTTCACTGCAATGTTGATGAGCATTGGAAAACAAATTGCCCTAAGTACCTTGTTAAGAAGAAAGAAAAGGAAGGTAAATATGATTTACTTGTCTTGGAAACATGTTTAGTGGAAAATGACCAAAATGCCTGGATACTTGATTCAGGGGCCACTAACCATGTTTGTTCTTCTTTACAAGAAACTAGTTCCTTCAAGCAGCTTGAGGACAGTGAGATGACACTCAAGGTTGGAACGGGAGATGTCATTTCAGCTCGTGCAGTGGGAGATGCTAAGTTGTTTTTCGAAAATAAATTCATGTTTTTGGAAAACTTGTACATAGTTCCTAAAATTAAAAGGAACTTAGTTTCCGTTTCTTGTCTTATTGAACATATGTACTCAATTAATTTTTCTATGAATGAAGCGTTCATTTATAAGAATGGTGTACATATTTGTTCAGCTAAGCTTGAAAACAACTTGTATGTATTAAGACCTAATGAAGCAAAAGCAGTTTTAAATCATGAGATGTTTAGAACTGCTAATACTCAAAATAAAAGGCAAAGAATTTCTCCAAATAACAATACCTATCTTTGGCATTTAAGATTAGGTCACATAAATCTCGATCGGATCGGGAGATTGGTAAAGAATGGACTTCTAAACAAGTTAAAAGATGTTTCATTACCTCCATGTGAATCTTGTCTTGAAGGTAAAATGACAAAGAGACCTTTTACTGGAAAAGGTTATAGAGCCAAAGAGCCTTTAGAACTTATACATTCAGACCTCTGTGGTCCGATGAATGTAAAAGCTAGAGGGGGTTTTGAATACTTCATCTCTTTTATAGATGATTATTCTAGGTATGGTTATTTATACTTAATGGAGCATAAGTCTGAAGCTCTTGAAAAGTTCAAGGAGTATAAGACTGAAGTTGAAAATCTATTAAGTAAAAAGATTAAAATACTTCGATCTGATCGAGGTGGAGAGTACATGGATTTGAGATTTCAGGACTATATGATAGAACATGGAATCCAATCCCAACTCTCAGCACCTGGTACACCTCAACAAAATGGTGTATCAGAGAGGAGAAATAGAACCTTGTTAGACATGGTTCGTTCAATGATGAGTTACGCTCAATTGCCTAGCTCGTTTTGGGGGTATGCAGTAGAGACTGCAGTTCATATCTTGAACAATGTTCCCTCGAAGAGTGTTTCTGAAACACCTTTCGAGCTATGGAGAGGACGTAAACCTAGTTTAAGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTATTAGTGACAAATCCCAAGAAGTTGGAACCTCGTTCAAGGTTATGCCAATTTGTTGGTTACCCTAAAGAGACGAGAGGTGGTCTATTCTTTGATCCACAAGAAAATAGAGTGTTTGTATCGACAAATGCTACTTTCTTGGAAGAAGACCACATGAGAAATCATAAACCACGAAGCAAATTAGTATTAAGTGAAGCTACTGATGAATCAACAAGGGTTGTTGATGAAGTTGGTCCCTCATCAAGGGTTGATGAAACCACCACATCAGGTCAATCTCATCCTTCTCAATCGTTGAGAATGCCTCGACGCAGTGGGAGGGTTGTATCACAACCTAACCGCTATTTGGGTTTAACTGAAACTCAAGTTGTCATACCAGATGATGGTGTTGAGGATCCATTGTCCTATAAACAGGCAATGAATGATGTAGATAAGGACCAATGGGTCAAAGCCATGGACCTTGAAATGGAGTCTATGTACTTCAATTCAGTGTGGGAGCTTGTAGATCTACCTGAAGGGGTAAAACCTATAGGGTGCAAATGGATCTATAAGAGAAAGAGAGATTCAGCTGGGAAGGTACAGACCTTTAAAGCTAGACTTGTGGCAAAAGGGTATACCCAAAGGGAAGGGGTTGACTATGAGGAAACTTTCTCTCCTGTTGCTATGTTAAAGTCTATAAGGATTCTCTTGTCCATCGCCACATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTCTGAATGGCAATCTTGAAGAGAGTATCTTTATGTCTCAGCCCGAGGGGTTCATAACCCAAGGTCAAGAGCAAAAAGTTTGCAAGCTGAATCGATCCATTTATGGGTTGAAACAAGCATCAAGATCTTGGAACATTAGGTTTGATACTGCGATCAAATCCTATGGTTTTGACCAGAATGTTGATGAACCTTGTGTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAGTACTTTATGTGGACGATATCCTCCTCATTGGGAATGATGTGGGTTACCTTACTGACGTTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGGAGAGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTGTCTCAAGCAACCTATATCGACAAATTGTTGGTTCGATATTCGATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGGAGTTCACTTGTCTAAGGAACAGAGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGCCTCAGCTGTGGGCAGCTTAATGTATGCTATGCTCTGCACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTAGGTATCAGTCCAACCCAGGGTTAGACCATTGGACGGCGGTTAAAATTATTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTCTGATTTCCAAACCGATAAGGATTCTAGGAAATCCACATCGGGATCAGTGTTCACCCTAAATGGGGAGCTGTAG

Coding sequence (CDS)

ATGTACGGACGGCTCCCGCGGCTCGGCTCGGCGGCACTTGTACGGACGACTCGGTTGTACGGACAGCTCGGTTCGGCTCGGTTGTACGGACGGCTCGGCTCGGCGGTACGGACGGCTCGATTCGCTCGGCTGTACGGACGGCTCGGTCGGTCGGCTCGGTTCGACCCGTTTTTTCATATGGTGCCGGTTCAAGTGGTTTTGGGCCGCATGTCTTCCTCAATTATTGCATTGCTTAAAAAAGATCAATTAACCGGTGAAAATTATGCGACGTGGAAATCGAAACTGAATATGATTCTAGTTATCGCTGATCTAAGCTTCGTCTTAATGGAGGAATGTCCTCCTTTCCCCACTAAACATGCATCCCAAAGTGTTAGGGATGCATATGACCGTTGGACAAAGGCCAATGACAAGGCTCGCCTCCACATCTTGGCTAGTATGTCTGACATACTAAGCAAGAAACATGAGATCATGGTCACTGCACGTCAGATCATGGACTCTCTTAGAGAGATGTTTGGACAACCGTCCATTCAGATCAAACAAGAGGCAAATGTTGCCCATTCTAAGAGGAGGTTTGTACCTTCACCTTCTGGATCTGAGAAAATTCAAAAGAGGAAAGAAGGGAAAGGGAAAGGTCCTACTATTGCTGTTGAGGACAAAGGGAAGGCTAAGGTAGCCATCAAGAGGAAATGTTTTCACTGCAATGTTGATGAGCATTGGAAAACAAATTGCCCTAAGTACCTTGTTAAGAAGAAAGAAAAGGAAGGTAAATATGATTTACTTGTCTTGGAAACATGTTTAGTGGAAAATGACCAAAATGCCTGGATACTTGATTCAGGGGCCACTAACCATGTTTGTTCTTCTTTACAAGAAACTAGTTCCTTCAAGCAGCTTGAGGACAGTGAGATGACACTCAAGGTTGGAACGGGAGATGTCATTTCAGCTCGTGCAGTGGGAGATGCTAAGTTGTTTTTCGAAAATAAATTCATGTTTTTGGAAAACTTGTACATAGTTCCTAAAATTAAAAGGAACTTAGTTTCCGTTTCTTGTCTTATTGAACATATGTACTCAATTAATTTTTCTATGAATGAAGCGTTCATTTATAAGAATGGTGTACATATTTGTTCAGCTAAGCTTGAAAACAACTTGTATGTATTAAGACCTAATGAAGCAAAAGCAGTTTTAAATCATGAGATGTTTAGAACTGCTAATACTCAAAATAAAAGGCAAAGAATTTCTCCAAATAACAATACCTATCTTTGGCATTTAAGATTAGGTCACATAAATCTCGATCGGATCGGGAGATTGGTAAAGAATGGACTTCTAAACAAGTTAAAAGATGTTTCATTACCTCCATGTGAATCTTGTCTTGAAGGTAAAATGACAAAGAGACCTTTTACTGGAAAAGGTTATAGAGCCAAAGAGCCTTTAGAACTTATACATTCAGACCTCTGTGGTCCGATGAATGTAAAAGCTAGAGGGGGTTTTGAATACTTCATCTCTTTTATAGATGATTATTCTAGGTATGGTTATTTATACTTAATGGAGCATAAGTCTGAAGCTCTTGAAAAGTTCAAGGAGTATAAGACTGAAGTTGAAAATCTATTAAGTAAAAAGATTAAAATACTTCGATCTGATCGAGGTGGAGAGTACATGGATTTGAGATTTCAGGACTATATGATAGAACATGGAATCCAATCCCAACTCTCAGCACCTGGTACACCTCAACAAAATGGTGTATCAGAGAGGAGAAATAGAACCTTGTTAGACATGGTTCGTTCAATGATGAGTTACGCTCAATTGCCTAGCTCGTTTTGGGGGTATGCAGTAGAGACTGCAGTTCATATCTTGAACAATGTTCCCTCGAAGAGTGTTTCTGAAACACCTTTCGAGCTATGGAGAGGACGTAAACCTAGTTTAAGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTATTAGTGACAAATCCCAAGAAGTTGGAACCTCGTTCAAGGTTATGCCAATTTGTTGGTTACCCTAAAGAGACGAGAGGTGGTCTATTCTTTGATCCACAAGAAAATAGAGTGTTTGTATCGACAAATGCTACTTTCTTGGAAGAAGACCACATGAGAAATCATAAACCACGAAGCAAATTAGTATTAAGTGAAGCTACTGATGAATCAACAAGGGTTGTTGATGAAGTTGGTCCCTCATCAAGGGTTGATGAAACCACCACATCAGGTCAATCTCATCCTTCTCAATCGTTGAGAATGCCTCGACGCAGTGGGAGGGTTGTATCACAACCTAACCGCTATTTGGGTTTAACTGAAACTCAAGTTGTCATACCAGATGATGGTGTTGAGGATCCATTGTCCTATAAACAGGCAATGAATGATGTAGATAAGGACCAATGGGTCAAAGCCATGGACCTTGAAATGGAGTCTATGTACTTCAATTCAGTGTGGGAGCTTGTAGATCTACCTGAAGGGGTAAAACCTATAGGGTGCAAATGGATCTATAAGAGAAAGAGAGATTCAGCTGGGAAGGTACAGACCTTTAAAGCTAGACTTGTGGCAAAAGGGTATACCCAAAGGGAAGGGGTTGACTATGAGGAAACTTTCTCTCCTGTTGCTATGTTAAAGTCTATAAGGATTCTCTTGTCCATCGCCACATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTCTGAATGGCAATCTTGAAGAGAGTATCTTTATGTCTCAGCCCGAGGGGTTCATAACCCAAGGTCAAGAGCAAAAAGTTTGCAAGCTGAATCGATCCATTTATGGGTTGAAACAAGCATCAAGATCTTGGAACATTAGGTTTGATACTGCGATCAAATCCTATGGTTTTGACCAGAATGTTGATGAACCTTGTGTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAGTACTTTATGTGGACGATATCCTCCTCATTGGGAATGATGTGGGTTACCTTACTGACGTTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGGAGAGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTGTCTCAAGCAACCTATATCGACAAATTGTTGGTTCGATATTCGATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGGCATGGAGTTCACTTGTCTAAGGAACAGAGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGCCTCAGCTGTGGGCAGCTTAATGTATGCTATGCTCTGCACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTAGGTATCAGTCCAACCCAGGGTTAGACCATTGGACGGCGGTTAAAATTATTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTCTGATTTCCAAACCGATAAGGATTCTAGGAAATCCACATCGGGATCAGTGTTCACCCTAAATGGGGAGCTGTAG

Protein sequence

MYGRLPRLGSAALVRTTRLYGQLGSARLYGRLGSAVRTARFARLYGRLGRSARFDPFFHMVPVQVVLGRMSSSIIALLKKDQLTGENYATWKSKLNMILVIADLSFVLMEECPPFPTKHASQSVRDAYDRWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEANVAHSKRRFVPSPSGSEKIQKRKEGKGKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLVKKKEKEGKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGTGDVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGEL
Homology
[Close]
BLAST of IVF0004028 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 646.7 bits (1667), Expect = 4.9e-184
Identity = 386/1069 (36.11%), Postives = 599/1069 (56.03%), Query Frame = 0 

Query: 170  MFGQPSIQIKQ--EANVAHSKRRFVPSPSGSEKIQKRKEGKGKGPTIAVED------KGK 229
            + G+ +I++K    A + + K R  P   G   I    EG+G+    +  +      +GK
Sbjct: 164  LHGKTTIELKDVTSALLLNEKMRKKPENQGQALI---TEGRGRSYQRSSNNYGRSGARGK 223

Query: 230  AKVAIK---RKCFHCNVDEHWKTNCPKYLVKKKEKEGK------------YDLLVL---- 289
            +K   K   R C++CN   H+K +CP     K E  G+             D +VL    
Sbjct: 224  SKNRSKSRVRNCYNCNQPGHFKRDCPNPRKGKGETSGQKNDDNTAAMVQNNDNVVLFINE 283

Query: 290  -ETCL-VENDQNAWILDSGATNHV-------CSSLQETSSFKQLEDSEMTLKVGTGDVIS 349
             E C+ +   ++ W++D+ A++H        C  +       ++ ++  +   G GD+  
Sbjct: 284  EEECMHLSGPESEWVVDTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICI 343

Query: 350  ARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHI 409
               VG          + L+++  VP ++ NL+S   L    Y   F+  +  + K  + I
Sbjct: 344  KTNVGCT--------LVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKWRLTKGSLVI 403

Query: 410  CSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRIG 469
                    LY       +  LN            +  IS +    LWH R+GH++   + 
Sbjct: 404  AKGVARGTLYRTNAEICQGELN----------AAQDEISVD----LWHKRMGHMSEKGLQ 463

Query: 470  RLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARG 529
             L K  L++  K  ++ PC+ CL GK  +  F     R    L+L++SD+CGPM +++ G
Sbjct: 464  ILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMG 523

Query: 530  GFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDL 589
            G +YF++FIDD SR  ++Y+++ K +  + F+++   VE    +K+K LRSD GGEY   
Sbjct: 524  GNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSR 583

Query: 590  RFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAV 649
             F++Y   HGI+ + + PGTPQ NGV+ER NRT+++ VRSM+  A+LP SFWG AV+TA 
Sbjct: 584  EFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTAC 643

Query: 650  HILNNVPSKSVS-ETPFELWRGRKPSLSHFRIWGCP--AHVLVTNPKKLEPRSRLCQFVG 709
            +++N  PS  ++ E P  +W  ++ S SH +++GC   AHV      KL+ +S  C F+G
Sbjct: 644  YLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIG 703

Query: 710  YPKETRGGLFFDPQENRVFVSTNATFLEEDHM----RNHKPRSKLVLSEATDESTRVVDE 769
            Y  E  G   +DP + +V  S +  F E +       + K ++ ++ +  T  ST   + 
Sbjct: 704  YGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADMSEKVKNGIIPNFVTIPSTS-NNP 763

Query: 770  VGPSSRVDETTTSGQ-------------------SHPSQSLRMP---RRSGRVVSQPNRY 829
                S  DE +  G+                    HP+Q        RRS R   +  RY
Sbjct: 764  TSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPLRRSERPRVESRRY 823

Query: 830  LGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVK 889
               +   V+I DD   +P S K+ ++  +K+Q +KAM  EMES+  N  ++LV+LP+G +
Sbjct: 824  --PSTEYVLISDD--REPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKR 883

Query: 890  PIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATF 949
            P+ CKW++K K+D   K+  +KARLV KG+ Q++G+D++E FSPV  + SIR +LS+A  
Sbjct: 884  PLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAAS 943

Query: 950  YDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIR 1009
             D E+ Q+DVKTAFL+G+LEE I+M QPEGF   G++  VCKLN+S+YGLKQA R W ++
Sbjct: 944  LDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMK 1003

Query: 1010 FDTAIKSYGFDQNVDEPCVY-KKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQF 1069
            FD+ +KS  + +   +PCVY K+ ++     L+LYVDD+L++G D G +  +K  L+  F
Sbjct: 1004 FDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSF 1063

Query: 1070 QMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSK 1129
             MKDLG AQ +LG++I+R+R ++ L LSQ  YI+++L R++M+N+K    P    + LSK
Sbjct: 1064 DMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSK 1123

Query: 1130 EQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKI 1173
            +  P T +E  +M ++PY+SAVGSLMYAM+CTRPDI +AVG+VSR+  NPG +HW AVK 
Sbjct: 1124 KMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKW 1183

[Close]
BLAST of IVF0004028 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 441.0 bits (1133), Expect = 4.1e-122
Identity = 318/1088 (29.23%), Postives = 524/1088 (48.16%), Query Frame = 0 

Query: 219  KGKAKVAIKRKCFHCNVDEHWKTNCPKY--LVKKKEKEGKYDL-------LVLETCLVEN 278
            KG +K   K KC HC  + H K +C  Y  ++  K KE +  +       +      V N
Sbjct: 223  KGNSK--YKVKCHHCGREGHIKKDCFHYKRILNNKNKENEKQVQTATSHGIAFMVKEVNN 282

Query: 279  ----DQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGT---GDVISARAVGDAKL 338
                D   ++LDSGA++H+   + + S +    +    LK+     G+ I A   G  +L
Sbjct: 283  TSVMDNCGFVLDSGASDHL---INDESLYTDSVEVVPPLKIAVAKQGEFIYATKRGIVRL 342

Query: 339  FFENKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHIC-SAKLENN 398
              +++ + LE++    +   NL+SV  L E   SI F  +   I KNG+ +  ++ + NN
Sbjct: 343  RNDHE-ITLEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTISKNGLMVVKNSGMLNN 402

Query: 399  LYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHIN------LDRIGRL 458
            +          V+N + + + N ++K       NN  LWH R GHI+      + R    
Sbjct: 403  V---------PVINFQAY-SINAKHK-------NNFRLWHERFGHISDGKLLEIKRKNMF 462

Query: 459  VKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRA--KEPLELIHSDLCGPMNVKARG 518
                LLN L ++S   CE CL GK  + PF     +   K PL ++HSD+CGP+      
Sbjct: 463  SDQSLLNNL-ELSCEICEPCLNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLD 522

Query: 519  GFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDL 578
               YF+ F+D ++ Y   YL+++KS+    F+++  + E   + K+  L  D G EY+  
Sbjct: 523  DKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSN 582

Query: 579  RFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAV 638
              + + ++ GI   L+ P TPQ NGVSER  RT+ +  R+M+S A+L  SFWG AV TA 
Sbjct: 583  EMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTAT 642

Query: 639  HILNNVPSKSV---SETPFELWRGRKPSLSHFRIWGCPAHVLVTNPK-KLEPRSRLCQFV 698
            +++N +PS+++   S+TP+E+W  +KP L H R++G   +V + N + K + +S    FV
Sbjct: 643  YLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHIKNKQGKFDDKSFKSIFV 702

Query: 699  GYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDE---------S 758
            GY  E  G   +D    +  V+ +    E + + +   + + V  + + E         S
Sbjct: 703  GY--EPNGFKLWDAVNEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESENKNFPNDS 762

Query: 759  TRVVDEVGP--SSRVDETTTSGQSHPSQSLRMPRRSGRVV-------------------- 818
             +++    P  S   D       S  S++   P  S +++                    
Sbjct: 763  RKIIQTEFPNESKECDNIQFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDS 822

Query: 819  SQPNRYL-------------------------GLTETQVVIPDDGVEDP----------- 878
             + N+Y                            +ET   + + G+++P           
Sbjct: 823  KESNKYFLNESKKRKRDDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINR 882

Query: 879  ----------LSYKQ--------------AMNDV-----------DKDQWVKAMDLEMES 938
                      +SY +                NDV           DK  W +A++ E+ +
Sbjct: 883  RSERLKTKPQISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNA 942

Query: 939  MYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFS 998
               N+ W +   PE    +  +W++  K +  G    +KARLVA+G+TQ+  +DYEETF+
Sbjct: 943  HKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFA 1002

Query: 999  PVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKL 1058
            PVA + S R +LS+   Y+ ++ QMDVKTAFLNG L+E I+M  P+G         VCKL
Sbjct: 1003 PVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGI--SCNSDNVCKL 1062

Query: 1059 NRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVY--KKINKGKVAFLVLYVDDILLI 1118
            N++IYGLKQA+R W   F+ A+K   F  +  + C+Y   K N  +  +++LYVDD+++ 
Sbjct: 1063 NKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIA 1122

Query: 1119 GNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSM 1171
              D+  + + K +L  +F+M DL E ++ +GI+I  + +   + LSQ+ Y+ K+L +++M
Sbjct: 1123 TGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRI--EMQEDKIYLSQSAYVKKILSKFNM 1182

[Close]
BLAST of IVF0004028 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 3.8e-112
Identity = 313/1087 (28.79%), Postives = 495/1087 (45.54%), Query Frame = 0 

Query: 229  KCFHCNVDEHWKTNCPKY-----LVKKKEKEGKYDLLVLETCLVEN---DQNAWILDSGA 288
            +C  C+V  H    CP+         +++    +        L  N   + N W+LDSGA
Sbjct: 257  RCQICSVQGHSAKRCPQLHQFQSTTNQQQSTSPFTPWQPRANLAVNSPYNANNWLLDSGA 316

Query: 289  TNHVCSSLQETSSFKQLEDSEMTLKVGTGDVISARAVGDAKLFFENKFMFLENLYIVPKI 348
            T+H+ S      SF Q       + +  G  I     G A L   ++ + L  +  VP I
Sbjct: 317  THHITSDFNNL-SFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNI 376

Query: 349  KRNLVSVSCLIE-HMYSINFSMNEAFIYKN---GVHICSAKLENNLYVLRPNEAKAVLNH 408
             +NL+SV  L   +  S+ F    +F  K+   GV +   K ++ LY      ++AV   
Sbjct: 377  HKNLISVYRLCNTNRVSVEF-FPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAV--- 436

Query: 409  EMFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLK-DVSLPPCESC 468
             MF  A+  +K    S       WH RLGH +L  +  ++ N  L  L     L  C  C
Sbjct: 437  SMF--ASPCSKATHSS-------WHSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCSDC 496

Query: 469  LEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRYGYLYLME 528
               K  K PF+     + +PLE I+SD+     + +   + Y++ F+D ++RY +LY ++
Sbjct: 497  FINKSHKVPFSNSTITSSKPLEYIYSDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYPLK 556

Query: 529  HKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQ 588
             KS+  + F  +K+ VEN    +I  L SD GGE++ LR  DY+ +HGI    S P TP+
Sbjct: 557  QKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLR--DYLSQHGISHFTSPPHTPE 616

Query: 589  QNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVS-ETPFELWRG 648
             NG+SER++R +++M  +++S+A +P ++W YA   AV+++N +P+  +  ++PF+   G
Sbjct: 617  HNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFG 676

Query: 649  RKPSLSHFRIWGCPAHVLVT--NPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVST 708
            + P+    +++GC  +  +   N  KLE +S+ C F+GY       L       R++ S 
Sbjct: 677  QPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSR 736

Query: 709  NATFLEE----------------------DHMRNHK--PRSKLVL--------------- 768
            +  F E                        +  +H   P + LVL               
Sbjct: 737  HVQFDERCFPFSTTNFGVSTSQEQRSDSAPNWPSHTTLPTTPLVLPAPPCLGPHLDTSPR 796

Query: 769  ---SEATDESTRVVDEVGPSSRVDETTTSGQSHPSQS--------------------LRM 828
               S +   +T+V     PSS +   ++S  + PS +                    L  
Sbjct: 797  PPSSPSPLCTTQVSSSNLPSSSISSPSSSEPTAPSHNGPQPTAQPHQTQNSNSNSPILNN 856

Query: 829  PRRSGRVVSQPNRYLGLTETQVVIP----------------------------------- 888
            P  +    + PN+   L ++ +  P                                   
Sbjct: 857  PNPNSPSPNSPNQNSPLPQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPII 916

Query: 889  -----------------DDGVEDP---LSY----------KQAMNDVDKDQWVKAMDLEM 948
                              DG+  P    SY          + A+  +  D+W +AM  E+
Sbjct: 917  QVNAQAPVNTHSMATRAKDGIRKPNQKYSYATSLAANSEPRTAIQAMKDDRWRQAMGSEI 976

Query: 949  ESMYFNSVWELV-DLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEE 1008
             +   N  W+LV   P  V  +GC+WI+ +K +S G +  +KARLVAKGY QR G+DY E
Sbjct: 977  NAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAE 1036

Query: 1009 TFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKV 1068
            TFSPV    SIRI+L +A    + I Q+DV  AFL G L + ++MSQP GF+ + +   V
Sbjct: 1037 TFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYV 1096

Query: 1069 CKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILL 1128
            C+L ++IYGLKQA R+W +   T + + GF  ++ +  ++       + ++++YVDDIL+
Sbjct: 1097 CRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILI 1156

Query: 1129 IGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYS 1171
             GND   L      L+ +F +K+  +  Y LGI+    R  + L LSQ  Y   LL R +
Sbjct: 1157 TGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIE--AKRVPQGLHLSQRRYTLDLLARTN 1216

[Close]
BLAST of IVF0004028 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 3.0e-109
Identity = 296/1034 (28.63%), Postives = 455/1034 (44.00%), Query Frame = 0 

Query: 272  NAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGTGDVISARAVGDAKLFFENKFMFL 331
            N W+LDSGAT+H+ S     S  +     +  + V  G  I     G   L  +++ + L
Sbjct: 329  NNWLLDSGATHHITSDFNNLSLHQPYTGGD-DVMVADGSTIPISHTGSTSLSTKSRPLNL 388

Query: 332  ENLYIVPKIKRNLVSVSCLIE------HMYSINFSMNEAFIYKNGVHICSAKLENNLYVL 391
             N+  VP I +NL+SV  L          +  +F + +      GV +   K ++ LY  
Sbjct: 389  HNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKD---LNTGVPLLQGKTKDELY-- 448

Query: 392  RPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLK 451
               E     +  +   A+  +K    S       WH RLGH     +  ++ N  L+ L 
Sbjct: 449  ---EWPIASSQPVSLFASPSSKATHSS-------WHARLGHPAPSILNSVISNYSLSVLN 508

Query: 452  -DVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDD 511
                   C  CL  K  K PF+     +  PLE I+SD+     + +   + Y++ F+D 
Sbjct: 509  PSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDH 568

Query: 512  YSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGI 571
            ++RY +LY ++ KS+  E F  +K  +EN    +I    SD GGE++ L   +Y  +HGI
Sbjct: 569  FTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFVAL--WEYFSQHGI 628

Query: 572  QSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSV 631
                S P TP+ NG+SER++R +++   +++S+A +P ++W YA   AV+++N +P+  +
Sbjct: 629  SHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLL 688

Query: 632  S-ETPFELWRGRKPSLSHFRIWGCPAHVLVT--NPKKLEPRSRLCQFVGYPKETRGGLFF 691
              E+PF+   G  P+    R++GC  +  +   N  KL+ +SR C F+GY       L  
Sbjct: 689  QLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCL 748

Query: 692  DPQENRVFVSTNATFLEE-----------DHMRNHKPRSKLVLSEATDESTR-------- 751
              Q +R+++S +  F E              ++  +  S  V S  T   TR        
Sbjct: 749  HLQTSRLYISRHVRFDENCFPFSNYLATLSPVQEQRRESSCVWSPHTTLPTRTPVLPAPS 808

Query: 752  -------------------------------------------VVDEVGPSSRVDETTTS 811
                                                          + GP      T T 
Sbjct: 809  CSDPHHAATPPSSPSAPFRNSQVSSSNLDSSFSSSFPSSPEPTAPRQNGPQPTTQPTQTQ 868

Query: 812  GQSHPS-----------------QSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDP 871
             Q+H S                 QSL  P +S      P      + T    P   +  P
Sbjct: 869  TQTHSSQNTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPTPPSILIHPP 928

Query: 872  LSYKQAMND--------------------------------------------VDKDQWV 931
                Q +N+                                            +  ++W 
Sbjct: 929  PPLAQIVNNNNQAPLNTHSMGTRAKAGIIKPNPKYSLAVSLAAESEPRTAIQALKDERWR 988

Query: 932  KAMDLEMESMYFNSVWELVDLPEG-VKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQR 991
             AM  E+ +   N  W+LV  P   V  +GC+WI+ +K +S G +  +KARLVAKGY QR
Sbjct: 989  NAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQR 1048

Query: 992  EGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFIT 1051
             G+DY ETFSPV    SIRI+L +A    + I Q+DV  AFL G L + ++MSQP GFI 
Sbjct: 1049 PGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFID 1108

Query: 1052 QGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVL 1111
            + +   VCKL +++YGLKQA R+W +     + + GF  +V +  ++       + ++++
Sbjct: 1109 KDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLV 1168

Query: 1112 YVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYID 1171
            YVDDIL+ GND   L +    L+ +F +KD  E  Y LGI+    R    L LSQ  YI 
Sbjct: 1169 YVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIE--AKRVPTGLHLSQRRYIL 1228

[Close]
BLAST of IVF0004028 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 137.1 bits (344), Expect = 1.3e-30
Identity = 92/282 (32.62%), Postives = 131/282 (46.45%), Query Frame = 0 

Query: 892  MDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS 951
            MDV TAFLN  ++E I++ QP GF+ +     V +L   +YGLKQA   WN   +  +K 
Sbjct: 1    MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 952  YGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEA 1011
             GF ++  E  +Y +       ++ +YVDD+L+          VK  L   + MKDLG+ 
Sbjct: 61   IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 1012 QYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQ 1071
               LG+  I    N  + LS   YI K      +   K    P  +   L +  SP    
Sbjct: 121  DKFLGLN-IHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSP---- 180

Query: 1072 EVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRT 1131
             ++D+   PY S VG L++     RPDI Y V ++SR+   P   H  + + +L+YL  T
Sbjct: 181  HLKDI--TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTT 240

Query: 1132 RDYMLVY-GAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNG 1173
            R   L Y     L LT Y D+      D   ST G V  L G
Sbjct: 241  RSMCLKYRSGSQLALTVYCDASHGAIHDLPHSTGGYVTLLAG 275

[Close]
BLAST of IVF0004028 vs. ExPASy TrEMBL
Match: A0A5A7TZD0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00090 PE=4 SV=1)

HSP 1 Score: 2215.3 bits (5739), Expect = 0.0e+00
Identity = 1100/1103 (99.73%), Postives = 1101/1103 (99.82%), Query Frame = 0 

Query: 70   MSSSIIALLKKDQLTGENYATWKSKLNMILVIADLSFVLMEECPPFPTKHASQSVRDAYD 129
            MSSSIIALLKKDQLTGENYATWKSKLNMILVI DLSFVLMEECPPFPTKHASQSVRDAYD
Sbjct: 1    MSSSIIALLKKDQLTGENYATWKSKLNMILVIVDLSFVLMEECPPFPTKHASQSVRDAYD 60

Query: 130  RWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEANVAHSKR 189
            RWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEANVAHSKR
Sbjct: 61   RWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEANVAHSKR 120

Query: 190  RFVPSPSGSEKIQKRKEGKGKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLVK 249
            RFVPSPSGSEKIQKRKEGKGKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLVK
Sbjct: 121  RFVPSPSGSEKIQKRKEGKGKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLVK 180

Query: 250  KKEKEGKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGTG 309
            KKEKEGKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGTG
Sbjct: 181  KKEKEGKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGTG 240

Query: 310  DVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKN 369
            DVISARAVGDAKLFF NKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKN
Sbjct: 241  DVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKN 300

Query: 370  GVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINL 429
            GVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINL
Sbjct: 301  GVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINL 360

Query: 430  DRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNV 489
            DRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNV
Sbjct: 361  DRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNV 420

Query: 490  KARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGE 549
            KARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGE
Sbjct: 421  KARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGE 480

Query: 550  YMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAV 609
            YMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAV
Sbjct: 481  YMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAV 540

Query: 610  ETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFV 669
            ETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFV
Sbjct: 541  ETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFV 600

Query: 670  GYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGP 729
            GYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGP
Sbjct: 601  GYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGP 660

Query: 730  SSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM 789
            SSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM
Sbjct: 661  SSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM 720

Query: 790  NDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARL 849
            NDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARL
Sbjct: 721  NDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARL 780

Query: 850  VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFM 909
            VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFM
Sbjct: 781  VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFM 840

Query: 910  SQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINK 969
            SQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINK
Sbjct: 841  SQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINK 900

Query: 970  GKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLA 1029
            GKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLA
Sbjct: 901  GKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLA 960

Query: 1030 LSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM 1089
            LSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM
Sbjct: 961  LSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM 1020

Query: 1090 YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYT 1149
            YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKI+LKYLRRTRDYMLVYGAKDLILTGYT
Sbjct: 1021 YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYT 1080

Query: 1150 DSDFQTDKDSRKSTSGSVFTLNG 1173
            DSDFQTDKDSRKSTSGSVFTLNG
Sbjct: 1081 DSDFQTDKDSRKSTSGSVFTLNG 1103

[Close]
BLAST of IVF0004028 vs. ExPASy TrEMBL
Match: A0A5A7T2V9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760 PE=4 SV=1)

HSP 1 Score: 2181.0 bits (5650), Expect = 0.0e+00
Identity = 1085/1103 (98.37%), Postives = 1090/1103 (98.82%), Query Frame = 0 

Query: 70   MSSSIIALLKKDQLTGENYATWKSKLNMILVIADLSFVLMEECPPFPTKHASQSVRDAYD 129
            MSSSIIALLKKDQLTGENY TWKSKLN ILVIADLSFVLMEECP FPTKHASQSVRDAYD
Sbjct: 1    MSSSIIALLKKDQLTGENYVTWKSKLNTILVIADLSFVLMEECPSFPTKHASQSVRDAYD 60

Query: 130  RWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEANVAHSKR 189
            RWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEANVAHSKR
Sbjct: 61   RWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEANVAHSKR 120

Query: 190  RFVPSPSGSEKIQKRKEGKGKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLVK 249
            RFVPSPSGSEKIQKRKEGKGKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLVK
Sbjct: 121  RFVPSPSGSEKIQKRKEGKGKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLVK 180

Query: 250  KKEKEGKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGTG 309
            K EKE KYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGTG
Sbjct: 181  KNEKESKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGTG 240

Query: 310  DVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKN 369
            DVISARAVGDAKLFF NKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKN
Sbjct: 241  DVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKN 300

Query: 370  GVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINL 429
            GVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINL
Sbjct: 301  GVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINL 360

Query: 430  DRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNV 489
            DRIGRLVK+GLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNV
Sbjct: 361  DRIGRLVKDGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNV 420

Query: 490  KARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGE 549
            KARG FEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI RSDRGGE
Sbjct: 421  KARGSFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKIFRSDRGGE 480

Query: 550  YMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAV 609
            YMDL FQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAV
Sbjct: 481  YMDLIFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAV 540

Query: 610  ETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFV 669
            ETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFV
Sbjct: 541  ETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFV 600

Query: 670  GYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGP 729
            GYPKETRGGLFFDP+ENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGP
Sbjct: 601  GYPKETRGGLFFDPKENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGP 660

Query: 730  SSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM 789
            SSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM
Sbjct: 661  SSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM 720

Query: 790  NDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARL 849
            NDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARL
Sbjct: 721  NDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARL 780

Query: 850  VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFM 909
            VAKGYT++EGVDYEETFS VAMLKSIRILLSIA FYDYEIWQMDVKTAFLNGNLEESIFM
Sbjct: 781  VAKGYTRKEGVDYEETFSSVAMLKSIRILLSIAKFYDYEIWQMDVKTAFLNGNLEESIFM 840

Query: 910  SQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINK 969
            SQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINK
Sbjct: 841  SQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINK 900

Query: 970  GKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLA 1029
            GKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGE QYVLGIQIIRDRKNKTLA
Sbjct: 901  GKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEGQYVLGIQIIRDRKNKTLA 960

Query: 1030 LSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM 1089
            LSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM
Sbjct: 961  LSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM 1020

Query: 1090 YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYT 1149
            YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYT
Sbjct: 1021 YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYT 1080

Query: 1150 DSDFQTDKDSRKSTSGSVFTLNG 1173
            +SDFQTDKDSRKSTS SVFTLNG
Sbjct: 1081 NSDFQTDKDSRKSTSRSVFTLNG 1103

[Close]
BLAST of IVF0004028 vs. ExPASy TrEMBL
Match: A0A5A7UYE8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001570 PE=4 SV=1)

HSP 1 Score: 1907.5 bits (4940), Expect = 0.0e+00
Identity = 975/1103 (88.40%), Postives = 976/1103 (88.49%), Query Frame = 0 

Query: 70   MSSSIIALLKKDQLTGENYATWKSKLNMILVIADLSFVLMEECPPFPTKHASQSVRDAYD 129
            MSSSIIALLKKDQLTGENYATWKSKLNMILVI DLSFVLMEECPPFPTKHASQSVRDAYD
Sbjct: 1    MSSSIIALLKKDQLTGENYATWKSKLNMILVIVDLSFVLMEECPPFPTKHASQSVRDAYD 60

Query: 130  RWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEANVAHSKR 189
            RWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEANVAHSKR
Sbjct: 61   RWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEANVAHSKR 120

Query: 190  RFVPSPSGSEKIQKRKEGKGKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLVK 249
            RFVPSPSGSEKIQKRKEGKGKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLVK
Sbjct: 121  RFVPSPSGSEKIQKRKEGKGKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLVK 180

Query: 250  KKEKEGKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGTG 309
            KKEKE                        GATNHVCSSLQETSSFKQLEDSEMTLKVGTG
Sbjct: 181  KKEKE------------------------GATNHVCSSLQETSSFKQLEDSEMTLKVGTG 240

Query: 310  DVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKN 369
            DVISARAVGDAK                                                
Sbjct: 241  DVISARAVGDAK------------------------------------------------ 300

Query: 370  GVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINL 429
                                                                  LGHINL
Sbjct: 301  ------------------------------------------------------LGHINL 360

Query: 430  DRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNV 489
            DRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNV
Sbjct: 361  DRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNV 420

Query: 490  KARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGE 549
            KARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGE
Sbjct: 421  KARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGE 480

Query: 550  YMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAV 609
            YMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAV
Sbjct: 481  YMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAV 540

Query: 610  ETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFV 669
            ETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFV
Sbjct: 541  ETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFV 600

Query: 670  GYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGP 729
            GYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGP
Sbjct: 601  GYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGP 660

Query: 730  SSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM 789
            SSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM
Sbjct: 661  SSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM 720

Query: 790  NDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARL 849
            NDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARL
Sbjct: 721  NDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARL 780

Query: 850  VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFM 909
            VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFM
Sbjct: 781  VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFM 840

Query: 910  SQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINK 969
            SQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINK
Sbjct: 841  SQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINK 900

Query: 970  GKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLA 1029
            GKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLA
Sbjct: 901  GKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLA 960

Query: 1030 LSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM 1089
            LSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM
Sbjct: 961  LSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM 977

Query: 1090 YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYT 1149
            YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKI+LKYLRRTRDYMLVYGAKDLILTGYT
Sbjct: 1021 YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYT 977

Query: 1150 DSDFQTDKDSRKSTSGSVFTLNG 1173
            DSDFQTDKDSRKSTSGSVFTLNG
Sbjct: 1081 DSDFQTDKDSRKSTSGSVFTLNG 977

[Close]
BLAST of IVF0004028 vs. ExPASy TrEMBL
Match: E2GK51 (Gag/pol protein (Fragment) OS=Bryonia dioica OX=3652 PE=4 SV=1)

HSP 1 Score: 1672.5 bits (4330), Expect = 0.0e+00
Identity = 838/1204 (69.60%), Postives = 959/1204 (79.65%), Query Frame = 0 

Query: 70   MSSSIIALLKKDQLTGENYATWKSKLNMILVIADLSFVLMEECPPFPTKHASQSVRDAYD 129
            M++SI+ LL  ++L G+NY+ WKS LN ILV+ DL FVL EECP  P  +A+++VR+AYD
Sbjct: 1    MNTSIVQLLASEKLNGDNYSAWKSNLNTILVVDDLRFVLTEECPQAPALNANRTVREAYD 60

Query: 130  RWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQ--------- 189
            RW KANDKAR++ILASM+D+L+KKH+ + TA+ IMDSLREMFGQPS  ++          
Sbjct: 61   RWVKANDKARVYILASMTDVLAKKHDSIATAKGIMDSLREMFGQPSWSLRHEAIKHIYTK 120

Query: 190  ------------------------------------------------------------ 249
                                                                        
Sbjct: 121  RMKEGTSVREHVLDMMMHFNIAEVNGGPIDEANQVSFILQSLPKSFVPFQTNASLNKIEF 180

Query: 250  -----------------------EANVAHSKRRFVPSPS-----GSEKIQKRKEGKGKGP 309
                                   EANVA +KR+F+   S     G  K Q +K+GKGK P
Sbjct: 181  NLTTLLNELQRFQNLTLSKGKEVEANVAVTKRKFIRGSSSKNKVGPSKAQMKKKGKGKAP 240

Query: 310  TIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLVKKKEK---EGKYDLLVLETCLVEN 369
              +   K     A K KCFHCN D HWK NCPKYL +KK +   +GKYDLLV+ETCLVE 
Sbjct: 241  NTSKVKKN----ADKGKCFHCNQDGHWKRNCPKYLAEKKAEKATQGKYDLLVVETCLVEC 300

Query: 370  DQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGTGDVISARAVGDAKLFFENKFM 429
            D + WILDSGATNH+C S QETSS+K+L++ E+TLKVGTG+V+SA AVGD  LFF+++++
Sbjct: 301  DASTWILDSGATNHICFSFQETSSWKKLKEGEITLKVGTGEVVSAEAVGDLTLFFQDRYL 360

Query: 430  FLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPNE 489
             L+++  VP +KRNL+S++C++EH+Y+I+F +NE FI   G+ ICSA  ENNLY LRP  
Sbjct: 361  ILKDVLYVPLMKRNLISIACILEHIYTISFEVNEVFILCKGIQICSAIRENNLYKLRPTR 420

Query: 490  AKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVSL 549
            A  VLN EMFRT  TQNK+Q++S  +N YLWHLRLGHINL+RI RLVK+G+LN+L+D SL
Sbjct: 421  ANVVLNTEMFRTLETQNKKQKVS--SNAYLWHLRLGHINLNRIERLVKSGILNQLEDNSL 480

Query: 550  PPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRYG 609
            PPCESCLEGKMTKR FTGKG RAK PLEL+HSDLCGPMNVKARGG+EYFISFIDD+SRYG
Sbjct: 481  PPCESCLEGKMTKRSFTGKGLRAKVPLELVHSDLCGPMNVKARGGYEYFISFIDDFSRYG 540

Query: 610  YLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLS 669
            ++YL+ HKSE+ EKFKEYK EVEN + K IK LRSDRGGEYMD +FQDY+IE GIQSQLS
Sbjct: 541  HVYLLHHKSESFEKFKEYKAEVENEIGKTIKTLRSDRGGEYMDSKFQDYLIEFGIQSQLS 600

Query: 670  APGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPF 729
            AP TPQQNGVSERRNRTLLDMVRSMMSYAQLP SFWGYA+ETA+HILNNVPSKSV ETP+
Sbjct: 601  APSTPQQNGVSERRNRTLLDMVRSMMSYAQLPDSFWGYALETAIHILNNVPSKSVLETPY 660

Query: 730  ELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF 789
            ELW+GRK SL +FRIWGCPAHVLV NPKKLEPRS+LC FVGYPKE+RGGLF+ PQEN+VF
Sbjct: 661  ELWKGRKSSLRYFRIWGCPAHVLVQNPKKLEPRSKLCLFVGYPKESRGGLFYHPQENKVF 720

Query: 790  VSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSR-VDETTTSGQSHPSQSL 849
            VSTNATFLEEDH RNH+PRSK+VL E    +T   D+   S++ VD+   S QSH SQ L
Sbjct: 721  VSTNATFLEEDHXRNHQPRSKIVLKEMFKNAT---DKPSSSTKVVDKANISDQSHTSQEL 780

Query: 850  RMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESM 909
            R+PRRSGRVV QPNRYLGL ETQ++IPDDGVEDPL+YKQAMNDVD+DQW+KAM+LEMESM
Sbjct: 781  RVPRRSGRVVHQPNRYLGLVETQIIIPDDGVEDPLTYKQAMNDVDRDQWIKAMNLEMESM 840

Query: 910  YFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSP 969
            YFNSVW LVDLP  VKPIGCKWIYKRKRD AGKVQTFKARLVAKGYTQ+EGVDYEETFSP
Sbjct: 841  YFNSVWTLVDLPSDVKPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEGVDYEETFSP 900

Query: 970  VAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLN 1029
            VAMLKSIRILLSIATFY+YEIWQMDVKTAFLNGNLEESI+M QPEGFI Q QEQKVCKL 
Sbjct: 901  VAMLKSIRILLSIATFYNYEIWQMDVKTAFLNGNLEESIYMVQPEGFIAQDQEQKVCKLQ 960

Query: 1030 RSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGND 1089
            +SIYGLKQASRSWNIRFDTAIKSYGF+QNVDEPCVYKKI    VAFL+LYVDDILLIGND
Sbjct: 961  KSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKKIVNSVVAFLILYVDDILLIGND 1020

Query: 1090 VGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNS 1149
            V YLTDVK WL  QFQMKDLGEAQY+LGIQI+R+RKNKTLA+SQA+YIDK+L RY MQNS
Sbjct: 1021 VEYLTDVKKWLNTQFQMKDLGEAQYILGIQIVRNRKNKTLAMSQASYIDKVLSRYKMQNS 1080

Query: 1150 KKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSR 1173
            KKG LPFRHG+HLSKEQ PKTPQEVEDMR IPY+SAVGSLMYAMLCTRPDICY+VGIVSR
Sbjct: 1081 KKGQLPFRHGIHLSKEQCPKTPQEVEDMRNIPYSSAVGSLMYAMLCTRPDICYSVGIVSR 1140

[Close]
BLAST of IVF0004028 vs. ExPASy TrEMBL
Match: A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)

HSP 1 Score: 1652.1 bits (4277), Expect = 0.0e+00
Identity = 832/1210 (68.76%), Postives = 955/1210 (78.93%), Query Frame = 0 

Query: 70   MSSSIIALLKKDQLTGENYATWKSKLNMILVIADLSFVLMEECPPFPTKHASQSVRDAYD 129
            M+S+ + +L  D+L G NYA+WK+ +N +L+I DL FVL+EECP  P  +A+++VR+ Y+
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 130  RWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQ--------- 189
            RW KAN+KAR +ILAS+S++L+KKHE M+TAR+IMDSL+EMFGQ S QIK          
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 190  ------------------------------------------------------------ 249
                                                                        
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 250  -----------------------EANVAHSKRRF----------VPSPSGSEKIQKRKEG 309
                                   EANVA S R+F          +PS SG++K +K+K G
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 310  KGKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLV-KKKEKEGKYDLLVLETCL 369
            +G    +A     K   A K  CFHCN + HWK NCPKYL  KKK K+GKYDLLVLETCL
Sbjct: 241  QGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 370  VENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGTGDVISARAVGDAKLFFEN 429
            VEND +AWI+DSGATNHVCSS Q  SS++QLE  EMT++VGTG V+SA AVG  +L  + 
Sbjct: 301  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 430  KFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLR 489
             F+ LEN+Y+VP +KRNL+SV CL+E  YS+ F++N+ FIYKNGV ICSAKLENNLYVLR
Sbjct: 361  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 490  PNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKD 549
               +KA+LN EMF+TA TQNKR +ISP  N +LWHLRLGHINL+RI RLVKNGLL++L++
Sbjct: 421  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 550  VSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYS 609
             SLP CESCLEGKMTKRPFTGKG+RAKEPLEL+HSDLCGPMNVKARGGFEYFI+F DDYS
Sbjct: 481  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

Query: 610  RYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQS 669
            RYGY+YLM+HKSEALEKFKEYK EVEN LSK IK  RSDRGGEYMDL+FQ+Y++E GI S
Sbjct: 541  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600

Query: 670  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSE 729
            QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYA LP+SFWGYAV+TAV+ILN VPSKSVSE
Sbjct: 601  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660

Query: 730  TPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQEN 789
            TP +LW GRK SL HFRIWGCPAHVL  NPKKLEPRS+LC FVGYPK TRGG F+DP++N
Sbjct: 661  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720

Query: 790  RVFVSTNATFLEEDHMRNHKPRSKLVLS----EATDESTRVVDEVGPSSRVDETTTSGQS 849
            +VFVSTNATFLEEDH+R HKPRSK+VL+    E T+ STRVV+E    +RV    +S ++
Sbjct: 721  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780

Query: 850  HPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMD 909
            H  QSLR PRRSGRV + P RY+ LTET  VI D  +EDPL++K+AM DVDKD+W+KAM+
Sbjct: 781  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840

Query: 910  LEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDY 969
            LE+ESMYFNSVW+LVD P+GVKPIGCKWIYKRKR + GKVQTFKARLVAKGYTQ EGVDY
Sbjct: 841  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900

Query: 970  EETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQ 1029
            EETFSPVAMLKSIRILLSIA ++DYEIWQMDVKTAFLNGNLEE+I+M QPEGFI  GQEQ
Sbjct: 901  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960

Query: 1030 KVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDI 1089
            K+CKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQ VDEPCVYK+I    VAFLVLYVDDI
Sbjct: 961  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020

Query: 1090 LLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVR 1149
            LLIGND+G LTD+K WLA QFQMKDLGEAQ+VLGIQI RDRKNK LALSQA+YIDK++V+
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080

Query: 1150 YSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYA 1173
            YSMQNSK+GLLPFRHGV LSKEQ PKTPQ+VE+MR IPYASAVGSLMYAMLCTRPDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140

[Close]
BLAST of IVF0004028 vs. NCBI nr
Match: KAA0025945.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0035786.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0040492.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0041262.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2204 bits (5710), Expect = 0.0
Identity = 1100/1103 (99.73%), Postives = 1101/1103 (99.82%), Query Frame = 0 

Query: 70   MSSSIIALLKKDQLTGENYATWKSKLNMILVIADLSFVLMEECPPFPTKHASQSVRDAYD 129
            MSSSIIALLKKDQLTGENYATWKSKLNMILVI DLSFVLMEECPPFPTKHASQSVRDAYD
Sbjct: 1    MSSSIIALLKKDQLTGENYATWKSKLNMILVIVDLSFVLMEECPPFPTKHASQSVRDAYD 60

Query: 130  RWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEANVAHSKR 189
            RWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEANVAHSKR
Sbjct: 61   RWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEANVAHSKR 120

Query: 190  RFVPSPSGSEKIQKRKEGKGKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLVK 249
            RFVPSPSGSEKIQKRKEGKGKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLVK
Sbjct: 121  RFVPSPSGSEKIQKRKEGKGKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLVK 180

Query: 250  KKEKEGKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGTG 309
            KKEKEGKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGTG
Sbjct: 181  KKEKEGKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGTG 240

Query: 310  DVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKN 369
            DVISARAVGDAKLFF NKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKN
Sbjct: 241  DVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKN 300

Query: 370  GVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINL 429
            GVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINL
Sbjct: 301  GVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINL 360

Query: 430  DRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNV 489
            DRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNV
Sbjct: 361  DRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNV 420

Query: 490  KARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGE 549
            KARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGE
Sbjct: 421  KARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGE 480

Query: 550  YMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAV 609
            YMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAV
Sbjct: 481  YMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAV 540

Query: 610  ETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFV 669
            ETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFV
Sbjct: 541  ETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFV 600

Query: 670  GYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGP 729
            GYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGP
Sbjct: 601  GYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGP 660

Query: 730  SSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM 789
            SSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM
Sbjct: 661  SSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM 720

Query: 790  NDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARL 849
            NDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARL
Sbjct: 721  NDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARL 780

Query: 850  VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFM 909
            VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFM
Sbjct: 781  VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFM 840

Query: 910  SQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINK 969
            SQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINK
Sbjct: 841  SQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINK 900

Query: 970  GKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLA 1029
            GKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLA
Sbjct: 901  GKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLA 960

Query: 1030 LSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM 1089
            LSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM
Sbjct: 961  LSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM 1020

Query: 1090 YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYT 1149
            YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKI+LKYLRRTRDYMLVYGAKDLILTGYT
Sbjct: 1021 YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYT 1080

Query: 1150 DSDFQTDKDSRKSTSGSVFTLNG 1172
            DSDFQTDKDSRKSTSGSVFTLNG
Sbjct: 1081 DSDFQTDKDSRKSTSGSVFTLNG 1103

[Close]
BLAST of IVF0004028 vs. NCBI nr
Match: KAA0035907.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 2169 bits (5621), Expect = 0.0
Identity = 1085/1103 (98.37%), Postives = 1090/1103 (98.82%), Query Frame = 0 

Query: 70   MSSSIIALLKKDQLTGENYATWKSKLNMILVIADLSFVLMEECPPFPTKHASQSVRDAYD 129
            MSSSIIALLKKDQLTGENY TWKSKLN ILVIADLSFVLMEECP FPTKHASQSVRDAYD
Sbjct: 1    MSSSIIALLKKDQLTGENYVTWKSKLNTILVIADLSFVLMEECPSFPTKHASQSVRDAYD 60

Query: 130  RWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEANVAHSKR 189
            RWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEANVAHSKR
Sbjct: 61   RWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEANVAHSKR 120

Query: 190  RFVPSPSGSEKIQKRKEGKGKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLVK 249
            RFVPSPSGSEKIQKRKEGKGKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLVK
Sbjct: 121  RFVPSPSGSEKIQKRKEGKGKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLVK 180

Query: 250  KKEKEGKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGTG 309
            K EKE KYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGTG
Sbjct: 181  KNEKESKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGTG 240

Query: 310  DVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKN 369
            DVISARAVGDAKLFF NKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKN
Sbjct: 241  DVISARAVGDAKLFFGNKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKN 300

Query: 370  GVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINL 429
            GVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINL
Sbjct: 301  GVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINL 360

Query: 430  DRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNV 489
            DRIGRLVK+GLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNV
Sbjct: 361  DRIGRLVKDGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNV 420

Query: 490  KARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGE 549
            KARG FEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI RSDRGGE
Sbjct: 421  KARGSFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKIFRSDRGGE 480

Query: 550  YMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAV 609
            YMDL FQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAV
Sbjct: 481  YMDLIFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAV 540

Query: 610  ETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFV 669
            ETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFV
Sbjct: 541  ETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFV 600

Query: 670  GYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGP 729
            GYPKETRGGLFFDP+ENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGP
Sbjct: 601  GYPKETRGGLFFDPKENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGP 660

Query: 730  SSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM 789
            SSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM
Sbjct: 661  SSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM 720

Query: 790  NDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARL 849
            NDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARL
Sbjct: 721  NDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARL 780

Query: 850  VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFM 909
            VAKGYT++EGVDYEETFS VAMLKSIRILLSIA FYDYEIWQMDVKTAFLNGNLEESIFM
Sbjct: 781  VAKGYTRKEGVDYEETFSSVAMLKSIRILLSIAKFYDYEIWQMDVKTAFLNGNLEESIFM 840

Query: 910  SQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINK 969
            SQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINK
Sbjct: 841  SQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINK 900

Query: 970  GKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLA 1029
            GKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGE QYVLGIQIIRDRKNKTLA
Sbjct: 901  GKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEGQYVLGIQIIRDRKNKTLA 960

Query: 1030 LSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM 1089
            LSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM
Sbjct: 961  LSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM 1020

Query: 1090 YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYT 1149
            YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYT
Sbjct: 1021 YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYT 1080

Query: 1150 DSDFQTDKDSRKSTSGSVFTLNG 1172
            +SDFQTDKDSRKSTS SVFTLNG
Sbjct: 1081 NSDFQTDKDSRKSTSRSVFTLNG 1103

[Close]
BLAST of IVF0004028 vs. NCBI nr
Match: KAA0059226.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1896 bits (4912), Expect = 0.0
Identity = 975/1103 (88.40%), Postives = 976/1103 (88.49%), Query Frame = 0 

Query: 70   MSSSIIALLKKDQLTGENYATWKSKLNMILVIADLSFVLMEECPPFPTKHASQSVRDAYD 129
            MSSSIIALLKKDQLTGENYATWKSKLNMILVI DLSFVLMEECPPFPTKHASQSVRDAYD
Sbjct: 1    MSSSIIALLKKDQLTGENYATWKSKLNMILVIVDLSFVLMEECPPFPTKHASQSVRDAYD 60

Query: 130  RWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEANVAHSKR 189
            RWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEANVAHSKR
Sbjct: 61   RWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEANVAHSKR 120

Query: 190  RFVPSPSGSEKIQKRKEGKGKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLVK 249
            RFVPSPSGSEKIQKRKEGKGKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLVK
Sbjct: 121  RFVPSPSGSEKIQKRKEGKGKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLVK 180

Query: 250  KKEKEGKYDLLVLETCLVENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGTG 309
            KKEKEG                        ATNHVCSSLQETSSFKQLEDSEMTLKVGTG
Sbjct: 181  KKEKEG------------------------ATNHVCSSLQETSSFKQLEDSEMTLKVGTG 240

Query: 310  DVISARAVGDAKLFFENKFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKN 369
            DVISARAVGDAKL                                               
Sbjct: 241  DVISARAVGDAKL----------------------------------------------- 300

Query: 370  GVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINL 429
                                                                   GHINL
Sbjct: 301  -------------------------------------------------------GHINL 360

Query: 430  DRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNV 489
            DRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNV
Sbjct: 361  DRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNV 420

Query: 490  KARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGE 549
            KARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGE
Sbjct: 421  KARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGE 480

Query: 550  YMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAV 609
            YMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAV
Sbjct: 481  YMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAV 540

Query: 610  ETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFV 669
            ETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFV
Sbjct: 541  ETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFV 600

Query: 670  GYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGP 729
            GYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGP
Sbjct: 601  GYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGP 660

Query: 730  SSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM 789
            SSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM
Sbjct: 661  SSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAM 720

Query: 790  NDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARL 849
            NDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARL
Sbjct: 721  NDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARL 780

Query: 850  VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFM 909
            VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFM
Sbjct: 781  VAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFM 840

Query: 910  SQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINK 969
            SQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINK
Sbjct: 841  SQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINK 900

Query: 970  GKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLA 1029
            GKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLA
Sbjct: 901  GKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLA 960

Query: 1030 LSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM 1089
            LSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM
Sbjct: 961  LSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLM 977

Query: 1090 YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYT 1149
            YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKI+LKYLRRTRDYMLVYGAKDLILTGYT
Sbjct: 1021 YAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYT 977

Query: 1150 DSDFQTDKDSRKSTSGSVFTLNG 1172
            DSDFQTDKDSRKSTSGSVFTLNG
Sbjct: 1081 DSDFQTDKDSRKSTSGSVFTLNG 977

[Close]
BLAST of IVF0004028 vs. NCBI nr
Match: ADJ18449.1 (gag/pol protein, partial [Bryonia dioica])

HSP 1 Score: 1661 bits (4302), Expect = 0.0
Identity = 841/1210 (69.50%), Postives = 959/1210 (79.26%), Query Frame = 0 

Query: 70   MSSSIIALLKKDQLTGENYATWKSKLNMILVIADLSFVLMEECPPFPTKHASQSVRDAYD 129
            M++SI+ LL  ++L G+NY+ WKS LN ILV+ DL FVL EECP  P  +A+++VR+AYD
Sbjct: 1    MNTSIVQLLASEKLNGDNYSAWKSNLNTILVVDDLRFVLTEECPQAPALNANRTVREAYD 60

Query: 130  RWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEA------- 189
            RW KANDKAR++ILASM+D+L+KKH+ + TA+ IMDSLREMFGQPS  ++ EA       
Sbjct: 61   RWVKANDKARVYILASMTDVLAKKHDSIATAKGIMDSLREMFGQPSWSLRHEAIKHIYTK 120

Query: 190  ------------------------------------------------------------ 249
                                                                        
Sbjct: 121  RMKEGTSVREHVLDMMMHFNIAEVNGGPIDEANQVSFILQSLPKSFVPFQTNASLNKIEF 180

Query: 250  -------------------------NVAHSKRRFVPSPS-----GSEKIQKRKEGKGKGP 309
                                     NVA +KR+F+   S     G  K Q +K+GKGK P
Sbjct: 181  NLTTLLNELQRFQNLTLSKGKEVEANVAVTKRKFIRGSSSKNKVGPSKAQMKKKGKGKAP 240

Query: 310  TIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLVKKKEK---EGKYDLLVLETCLVEN 369
              +   K     A K KCFHCN D HWK NCPKYL +KK +   +GKYDLLV+ETCLVE 
Sbjct: 241  NTSKVKKN----ADKGKCFHCNQDGHWKRNCPKYLAEKKAEKATQGKYDLLVVETCLVEC 300

Query: 370  DQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGTGDVISARAVGDAKLFFENKFM 429
            D + WILDSGATNH+C S QETSS+K+L++ E+TLKVGTG+V+SA AVGD  LFF+++++
Sbjct: 301  DASTWILDSGATNHICFSFQETSSWKKLKEGEITLKVGTGEVVSAEAVGDLTLFFQDRYL 360

Query: 430  FLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPNE 489
             L+++  VP +KRNL+S++C++EH+Y+I+F +NE FI   G+ ICSA  ENNLY LRP  
Sbjct: 361  ILKDVLYVPLMKRNLISIACILEHIYTISFEVNEVFILCKGIQICSAIRENNLYKLRPTR 420

Query: 490  AKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVSL 549
            A  VLN EMFRT  TQNK+Q++S N   YLWHLRLGHINL+RI RLVK+G+LN+L+D SL
Sbjct: 421  ANVVLNTEMFRTLETQNKKQKVSSN--AYLWHLRLGHINLNRIERLVKSGILNQLEDNSL 480

Query: 550  PPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRYG 609
            PPCESCLEGKMTKR FTGKG RAK PLEL+HSDLCGPMNVKARGG+EYFISFIDD+SRYG
Sbjct: 481  PPCESCLEGKMTKRSFTGKGLRAKVPLELVHSDLCGPMNVKARGGYEYFISFIDDFSRYG 540

Query: 610  YLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLS 669
            ++YL+ HKSE+ EKFKEYK EVEN + K IK LRSDRGGEYMD +FQDY+IE GIQSQLS
Sbjct: 541  HVYLLHHKSESFEKFKEYKAEVENEIGKTIKTLRSDRGGEYMDSKFQDYLIEFGIQSQLS 600

Query: 670  APGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPF 729
            AP TPQQNGVSERRNRTLLDMVRSMMSYAQLP SFWGYA+ETA+HILNNVPSKSV ETP+
Sbjct: 601  APSTPQQNGVSERRNRTLLDMVRSMMSYAQLPDSFWGYALETAIHILNNVPSKSVLETPY 660

Query: 730  ELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVF 789
            ELW+GRK SL +FRIWGCPAHVLV NPKKLEPRS+LC FVGYPKE+RGGLF+ PQEN+VF
Sbjct: 661  ELWKGRKSSLRYFRIWGCPAHVLVQNPKKLEPRSKLCLFVGYPKESRGGLFYHPQENKVF 720

Query: 790  VSTNATFLEEDHMRNHKPRSKLVLSE----ATDE---STRVVDEVGPSSRVDETTTSGQS 849
            VSTNATFLEEDH RNH+PRSK+VL E    ATD+   ST+VVD+            S QS
Sbjct: 721  VSTNATFLEEDHXRNHQPRSKIVLKEMFKNATDKPSSSTKVVDKAN---------ISDQS 780

Query: 850  HPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMD 909
            H SQ LR+PRRSGRVV QPNRYLGL ETQ++IPDDGVEDPL+YKQAMNDVD+DQW+KAM+
Sbjct: 781  HTSQELRVPRRSGRVVHQPNRYLGLVETQIIIPDDGVEDPLTYKQAMNDVDRDQWIKAMN 840

Query: 910  LEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDY 969
            LEMESMYFNSVW LVDLP  VKPIGCKWIYKRKRD AGKVQTFKARLVAKGYTQ+EGVDY
Sbjct: 841  LEMESMYFNSVWTLVDLPSDVKPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEGVDY 900

Query: 970  EETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQ 1029
            EETFSPVAMLKSIRILLSIATFY+YEIWQMDVKTAFLNGNLEESI+M QPEGFI Q QEQ
Sbjct: 901  EETFSPVAMLKSIRILLSIATFYNYEIWQMDVKTAFLNGNLEESIYMVQPEGFIAQDQEQ 960

Query: 1030 KVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDI 1089
            KVCKL +SIYGLKQASRSWNIRFDTAIKSYGF+QNVDEPCVYKKI    VAFL+LYVDDI
Sbjct: 961  KVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKKIVNSVVAFLILYVDDI 1020

Query: 1090 LLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVR 1149
            LLIGNDV YLTDVK WL  QFQMKDLGEAQY+LGIQI+R+RKNKTLA+SQA+YIDK+L R
Sbjct: 1021 LLIGNDVEYLTDVKKWLNTQFQMKDLGEAQYILGIQIVRNRKNKTLAMSQASYIDKVLSR 1080

Query: 1150 YSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYA 1172
            Y MQNSKKG LPFRHG+HLSKEQ PKTPQEVEDMR IPY+SAVGSLMYAMLCTRPDICY+
Sbjct: 1081 YKMQNSKKGQLPFRHGIHLSKEQCPKTPQEVEDMRNIPYSSAVGSLMYAMLCTRPDICYS 1140

[Close]
BLAST of IVF0004028 vs. NCBI nr
Match: TYK14550.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1640 bits (4248), Expect = 0.0
Identity = 832/1210 (68.76%), Postives = 955/1210 (78.93%), Query Frame = 0 

Query: 70   MSSSIIALLKKDQLTGENYATWKSKLNMILVIADLSFVLMEECPPFPTKHASQSVRDAYD 129
            M+S+ + +L  D+L G NYA+WK+ +N +L+I DL FVL+EECP  P  +A+++VR+ Y+
Sbjct: 1    MTSATLNMLAADKLNGNNYASWKNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYE 60

Query: 130  RWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQ--------- 189
            RW KAN+KAR +ILAS+S++L+KKHE M+TAR+IMDSL+EMFGQ S QIK          
Sbjct: 61   RWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNA 120

Query: 190  ------------------------------------------------------------ 249
                                                                        
Sbjct: 121  RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAY 180

Query: 250  -----------------------EANVAHSKRRF----------VPSPSGSEKIQKRKEG 309
                                   EANVA S R+F          +PS SG++K +K+K G
Sbjct: 181  TLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGG 240

Query: 310  KGKGPTIAVEDKGKAKVAIKRKCFHCNVDEHWKTNCPKYLV-KKKEKEGKYDLLVLETCL 369
            +G    +A     K   A K  CFHCN + HWK NCPKYL  KKK K+GKYDLLVLETCL
Sbjct: 241  QGNKANLAAAKTTKKTKAAKGICFHCNQEGHWKRNCPKYLAEKKKAKQGKYDLLVLETCL 300

Query: 370  VENDQNAWILDSGATNHVCSSLQETSSFKQLEDSEMTLKVGTGDVISARAVGDAKLFFEN 429
            VEND +AWI+DSGATNHVCSS Q  SS++QLE  EMT++VGTG V+SA AVG  +L  + 
Sbjct: 301  VENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMRVGTGHVVSAIAVGGLRLCLQK 360

Query: 430  KFMFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLR 489
             F+ LEN+Y+VP +KRNL+SV CL+E  YS+ F++N+ FIYKNGV ICSAKLENNLYVLR
Sbjct: 361  SFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVFIYKNGVEICSAKLENNLYVLR 420

Query: 490  PNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKD 549
               +KA+LN EMF+TA TQNKR +ISP  N +LWHLRLGHINL+RI RLVKNGLL++L++
Sbjct: 421  SLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLGHINLNRIERLVKNGLLSELEE 480

Query: 550  VSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYS 609
             SLP CESCLEGKMTKRPFTGKG+RAKEPLEL+HSDLCGPMNVKARGGFEYFI+F DDYS
Sbjct: 481  NSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGGFEYFITFTDDYS 540

Query: 610  RYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQS 669
            RYGY+YLM+HKSEALEKFKEYK EVEN LSK IK  RSDRGGEYMDL+FQ+Y++E GI S
Sbjct: 541  RYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECGIVS 600

Query: 670  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSE 729
            QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYA LP+SFWGYAV+TAV+ILN VPSKSVSE
Sbjct: 601  QLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAVYILNCVPSKSVSE 660

Query: 730  TPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQEN 789
            TP +LW GRK SL HFRIWGCPAHVL  NPKKLEPRS+LC FVGYPK TRGG F+DP++N
Sbjct: 661  TPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDN 720

Query: 790  RVFVSTNATFLEEDHMRNHKPRSKLVLSE----ATDESTRVVDEVGPSSRVDETTTSGQS 849
            +VFVSTNATFLEEDH+R HKPRSK+VL+E     T+ STRVV+E    +RV    +S ++
Sbjct: 721  KVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRT 780

Query: 850  HPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMD 909
            H  QSLR PRRSGRV + P RY+ LTET  VI D  +EDPL++K+AM DVDKD+W+KAM+
Sbjct: 781  HQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMN 840

Query: 910  LEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDY 969
            LE+ESMYFNSVW+LVD P+GVKPIGCKWIYKRKR + GKVQTFKARLVAKGYTQ EGVDY
Sbjct: 841  LELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDY 900

Query: 970  EETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQ 1029
            EETFSPVAMLKSIRILLSIA ++DYEIWQMDVKTAFLNGNLEE+I+M QPEGFI  GQEQ
Sbjct: 901  EETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYMQQPEGFIIPGQEQ 960

Query: 1030 KVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDI 1089
            K+CKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQ VDEPCVYK+I    VAFLVLYVDDI
Sbjct: 961  KICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIINKSVAFLVLYVDDI 1020

Query: 1090 LLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVR 1149
            LLIGND+G LTD+K WLA QFQMKDLGEAQ+VLGIQI RDRKNK LALSQA+YIDK++V+
Sbjct: 1021 LLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLALSQASYIDKIVVK 1080

Query: 1150 YSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYA 1172
            YSMQNSK+GLLPFRHGV LSKEQ PKTPQ+VE+MR IPYASAVGSLMYAMLCTRPDICYA
Sbjct: 1081 YSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYA 1140

[Close]
BLAST of IVF0004028 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 252.7 bits (644), Expect = 1.5e-66
Identity = 146/400 (36.50%), Postives = 227/400 (56.75%), Query Frame = 0 

Query: 780  EDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSA 839
            ++P +Y +A   +    W  AMD E+ +M     WE+  LP   KPIGCKW+YK K +S 
Sbjct: 84   KEPSTYNEAKEFL---VWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSD 143

Query: 840  GKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFL 899
            G ++ +KARLVAKGYTQ+EG+D+ ETFSPV  L S++++L+I+  Y++ + Q+D+  AFL
Sbjct: 144  GTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 203

Query: 900  NGNLEESIFMSQPEGFIT-QGQE---QKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFD 959
            NG+L+E I+M  P G+   QG       VC L +SIYGLKQASR W ++F   +  +GF 
Sbjct: 204  NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFV 263

Query: 960  QNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVL 1019
            Q+  +   + KI       +++YVDDI++  N+   + ++K+ L + F+++DLG  +Y L
Sbjct: 264  QSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFL 323

Query: 1020 GIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVED 1079
            G++I R      + + Q  Y   LL    +   K   +P    V  S         +  D
Sbjct: 324  GLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSG----GDFVD 383

Query: 1080 MRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYM 1139
             +   Y   +G LMY  + TR DI +AV  +S++   P L H  AV  IL Y++ T    
Sbjct: 384  AK--AYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQG 443

Query: 1140 LVYGAK-DLILTGYTDSDFQTDKDSRKSTSGSVFTLNGEL 1175
            L Y ++ ++ L  ++D+ FQ+ KD+R+ST+G    L   L
Sbjct: 444  LFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSL 471

[Close]
BLAST of IVF0004028 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 85.9 bits (211), Expect = 2.4e-16
Identity = 67/193 (34.72%), Postives = 98/193 (50.78%), Query Frame = 0 

Query: 974  FLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQA 1033
            +L+LYVDDILL G+    L  +   L++ F MKDLG   Y LGIQI        L LSQ 
Sbjct: 2    YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI--KTHPSGLFLSQT 61

Query: 1034 TYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAML 1093
             Y +++L    M + K    P    + L+   S     +  D R     S VG+L Y  L
Sbjct: 62   KYAEQILNNAGMLDCKPMSTPL--PLKLNSSVSTAKYPDPSDFR-----SIVGALQYLTL 121

Query: 1094 CTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDY-MLVYGAKDLILTGYTDSD 1153
             TRPDI YAV IV +    P L  +  +K +L+Y++ T  + + ++    L +  + DSD
Sbjct: 122  -TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSD 181

Query: 1154 FQTDKDSRKSTSG 1166
            +     +R+ST+G
Sbjct: 182  WAGCTSTRRSTTG 184

[Close]
BLAST of IVF0004028 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 82.4 bits (202), Expect = 2.6e-15
Identity = 48/133 (36.09%), Postives = 72/133 (54.14%), Query Frame = 0 

Query: 750 MPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMY 809
           M  RS   +++ N    LT T  +      ++P S   A+ D     W +AM  E++++ 
Sbjct: 1   MLTRSKAGINKLNPKYSLTITTTI-----KKEPKSVIFALKD---PGWCQAMQEELDALS 60

Query: 810 FNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPV 869
            N  W LV  P     +GCKW++K K  S G +   KARLVAKG+ Q EG+ + ET+SPV
Sbjct: 61  RNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPV 120

Query: 870 AMLKSIRILLSIA 883
               +IR +L++A
Sbjct: 121 VRTATIRTILNVA 125

[Close]
BLAST of IVF0004028 vs. TAIR 10
Match: ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 63.9 bits (154), Expect = 9.7e-10
Identity = 32/82 (39.02%), Postives = 51/82 (62.20%), Query Frame = 0 

Query: 584 NRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVS-ETPFELWRGRKPSLSHF 643
           NRT+++ VRSM+    LP +F   A  TAVHI+N  PS +++   P E+W    P+ S+ 
Sbjct: 2   NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61

Query: 644 RIWGCPAHVLVTNPKKLEPRSR 665
           R +GC A++   +  KL+PR++
Sbjct: 62  RRFGCVAYI-HCDEGKLKPRAK 82

[Close]
BLAST of IVF0004028 vs. TAIR 10
Match: ATMG00300.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 60.1 bits (144), Expect = 1.4e-08
Identity = 30/75 (40.00%), Postives = 42/75 (56.00%), Query Frame = 0 

Query: 415 NNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKE 474
           + T LWH RL H++   +  LVK G L+  K  SL  CE C+ GK  +  F+   +  K 
Sbjct: 67  DETRLWHSRLAHMSQRGMELLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKN 126

Query: 475 PLELIHSDLCGPMNV 490
           PL+ +HSDL G  +V
Sbjct: 127 PLDYVHSDLWGAPSV 141

The following BLAST results are available for this feature:
BLAST of IVF0004028 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P109784.9e-18436.11Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P041464.1e-12229.23Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
Q9ZT943.8e-11228.79Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
Q94HW23.0e-10928.63Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
P256001.3e-3032.62Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT... [more]
BLAST of IVF0004028 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TZD00.0e+0099.73Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G000... [more]
A0A5A7T2V90.0e+0098.37Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760... [more]
A0A5A7UYE80.0e+0088.40Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G0015... [more]
E2GK510.0e+0069.60Gag/pol protein (Fragment) OS=Bryonia dioica OX=3652 PE=4 SV=1[more]
A0A5A7SMH80.0e+0068.76Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025... [more]
BLAST of IVF0004028 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0025945.10.099.73gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumi... [more]
KAA0035907.10.098.37gag/pol protein [Cucumis melo var. makuwa][more]
KAA0059226.10.088.40gag/pol protein [Cucumis melo var. makuwa][more]
ADJ18449.10.069.50gag/pol protein, partial [Bryonia dioica][more]
TYK14550.10.068.76gag/pol protein [Cucumis melo var. makuwa][more]
BLAST of IVF0004028 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G23160.11.5e-6636.50cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00810.12.4e-1634.72DNA/RNA polymerases superfamily protein [more]
ATMG00820.12.6e-1536.09Reverse transcriptase (RNA-dependent DNA polymerase) [more]
ATMG00710.19.7e-1039.02Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
ATMG00300.11.4e-0840.00Gag-Pol-related retrotransposon family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 517..537
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 731..753
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1154..1174
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1160..1174
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 707..755
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 187..212
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 707..722
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 273..757
coord: 780..1137
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 473..574
e-value: 7.4E-12
score: 45.5
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 471..636
score: 24.711876
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 811..1054
e-value: 1.6E-74
score: 250.6
IPR025724GAG-pre-integrase domainPFAMPF13976gag_pre-integrscoord: 407..460
e-value: 1.6E-12
score: 47.1
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 468..644
e-value: 1.0E-41
score: 144.4
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 811..1145
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 470..634

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0004028.1IVF0004028.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0006508 proteolysis
molecular_function GO:0008234 cysteine-type peptidase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding