IVF0003934 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAGGAAGCTTTGAGTTATCGACAAGAAATTCAAAAGAAAACTTAAAGTTTCTAAGTTTAATTTACTTCAAAAGAAAAATGGCAAACTGTCCCTGTGGCTCAGCCTGCAACTGCACTCCCAACAACTGCTCGTAAGTCTCTTCTCTTTGTTTCTCCAAAAGAAAATTTGTTTGTTTCTTCGGAATTGGTTTCCTCGTGAATTTTTTGGTTATTCTATACAATTCCTTTGTTCTTTTATTGTTTGTGAAAAAGTCAGGAAGTTGATAGATTTTTTTTTTCTTTAATTGCAGATGCAACCATAATGTTGCTTCCATGAAAGAGTACGAACTTTCCATCCCATATTTTCTTTTTGTTTATTTTATTATACATGCTTTCCATATGAAAAACATGAATAGAGATTAAAACGATGAGAAACCACTTCTCTAATTTTTATTAATCATTCCAGTTAAGGGTAGTCGTATACACAATTTTAAAATACAACAATTTTAACTAAAACGAAGTCTTAATAGGGCATTTAAATATATTCACTTGTGGAAGTTTATGATCTAAATAAATAAAATTGAACTATTTTTGACAAGCAGGAACTTCGAAGGTGATTGTGGCTGCAACAAATGCTCATGCGGAGACAATTGCAAGTGCAATCCATGCAACTGCTAAATTTCAAAGCTTTCGATATGGAAAGCATACTAATTTACATATTAATGTGCTTCTAATGATTTGAATTATGTATCAAATGGTTGTGTGTGTGTATGTTGTTTGTCTGTATGGTGTTTGACAAAATGCCGCTTACAAATACTTGAGAAATAAAATACCACACAACAACCTATTATTATATAATACTTGTATCTTGTTTTTTCCCCCTTCCAATGTCATTTCAAATAGGCCAGTTATGACTGGTTAATTTCTATTACTACTTTGCATCTATGATGTTGGATTCTTGTTTCTAATTTGATCTTTTAAGGTTTCATTACCTTTTATATTTAGTTCCTGCTCTGAAG CAGGAAGCTTTGAGTTATCGACAAGAAATTCAAAAGAAAACTTAAAGTTTCTAAGTTTAATTTACTTCAAAAGAAAAATGGCAAACTGTCCCTGTGGCTCAGCCTGCAACTGCACTCCCAACAACTGCTCATGCAACCATAATGTTGCTTCCATGAAAGAGAACTTCGAAGGTGATTGTGGCTGCAACAAATGCTCATGCGGAGACAATTGCAAGTGCAATCCATGCAACTGCTAAATTTCAAAGCTTTCGATATGGAAAGCATACTAATTTACATATTAATGTGCTTCTAATGATTTGAATTATGTATCAAATGGTTGTGTGTGTGTATGTTGTTTGTCTGTATGGTGTTTGACAAAATGCCGCTTACAAATACTTGAGAAATAAAATACCACACAACAACCTATTATTATATAATACTTGTATCTTGTTTTTTCCCCCTTCCAATGTCATTTCAAATAGGCCAGTTATGACTGGTTAATTTCTATTACTACTTTGCATCTATGATGTTGGATTCTTGTTTCTAATTTGATCTTTTAAGGTTTCATTACCTTTTATATTTAGTTCCTGCTCTGAAG ATGGCAAACTGTCCCTGTGGCTCAGCCTGCAACTGCACTCCCAACAACTGCTCATGCAACCATAATGTTGCTTCCATGAAAGAGAACTTCGAAGGTGATTGTGGCTGCAACAAATGCTCATGCGGAGACAATTGCAAGTGCAATCCATGCAACTGCTAA MANCPCGSACNCTPNNCSCNHNVASMKENFEGDCGCNKCSCGDNCKCNPCNC Homology
BLAST of IVF0003934 vs. ExPASy TrEMBL
Match: A0A6J1HPV6 (uncharacterized protein LOC111466261 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111466261 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 3.2e-06 Identity = 30/53 (56.60%), Postives = 33/53 (62.26%), Query Frame = 0
BLAST of IVF0003934 vs. ExPASy TrEMBL
Match: A0A6J1HS62 (uncharacterized protein LOC111466261 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111466261 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.0e-04 Identity = 27/52 (51.92%), Postives = 32/52 (61.54%), Query Frame = 0
BLAST of IVF0003934 vs. NCBI nr
Match: KAE8649531.1 (hypothetical protein Csa_017930, partial [Cucumis sativus]) HSP 1 Score: 111 bits (277), Expect = 2.75e-30 Identity = 47/52 (90.38%), Postives = 50/52 (96.15%), Query Frame = 0
BLAST of IVF0003934 vs. NCBI nr
Match: XP_022966636.1 (uncharacterized protein LOC111466261 isoform X2 [Cucurbita maxima]) HSP 1 Score: 59.7 bits (143), Expect = 7.96e-10 Identity = 30/53 (56.60%), Postives = 33/53 (62.26%), Query Frame = 0
BLAST of IVF0003934 vs. NCBI nr
Match: XP_022966635.1 (uncharacterized protein LOC111466261 isoform X1 [Cucurbita maxima]) HSP 1 Score: 55.1 bits (131), Expect = 5.34e-08 Identity = 28/54 (51.85%), Postives = 32/54 (59.26%), Query Frame = 0
BLAST of IVF0003934 vs. NCBI nr
Match: XP_019199340.1 (PREDICTED: metallothionein-like protein type 2 [Ipomoea nil]) HSP 1 Score: 46.6 bits (109), Expect = 6.87e-05 Identity = 30/67 (44.78%), Postives = 37/67 (55.22%), Query Frame = 0
BLAST of IVF0003934 vs. NCBI nr
Match: KAG6541459.1 (hypothetical protein Mapa_017131 [Marchantia paleacea]) HSP 1 Score: 46.2 bits (108), Expect = 1.71e-04 Identity = 26/52 (50.00%), Postives = 30/52 (57.69%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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