IVF0003927 (gene) Melon (IVF77) v1

Overview
NameIVF0003927
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationchr03: 21216683 .. 21220586 (-)
RNA-Seq ExpressionIVF0003927
SyntenyIVF0003927
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGACTTACTTTGCCGGCGGCAGGAGTAATCGAGCCTTCATTTCCACTGCCTTGAGAAGGCGCCGTTGCCATTGCAACTTTTCCGATTAACCAAATTCAATTATCCGATAACATGCTTCTTCTTTCACCATTGCCACTCTCCACTCGCTTTCCTGCAACTCATTTATCTTCTCCCGCCGTCTTCCTCCACCACAACCCCCATATTACAACAACCCATCTCTCATTTTCCTTCATCTCCGCCGCCGCTGCAGCCACCTCCTCCTCCGTTGTCACTTGTTACACTTCATCCGACAACCTCGAGTTCGACGTTTTCGAAGACGACCCAGTTTCCCTTCAGAGTCGCCGATACGACTTCACTCCTCTCCTCGACTTCCTTTCCCGGTCTTCGGCCTATCCCAAGTCCGATTCCGATACCGATTCGGAAGTGGAATTTGACTTTACTTTGAACTCTGGTTCTGACTCTGATACAGCTTCTCCGACCTCCCTCGACCCCACCGAGTTTCAGCTTGCTGAGGCCTACAGGGCCGTCCCGGCGCCTCTCTGGCACTCTCTGCTTAAGTCTCTTTGCTCTTCTTCCTCTTCGATTGGGCTAGGTTATGCGGTGGTTTCGTGGCTTCAGAAGCATAATTTGTGTTTCTCTTATGAATTGCTTTACTCGATTCTCATTCATGCACTTGGCCGCTCTGAGAAGCTCTATGAAGCTTTTATTCTCTCCCAGAAGCAAACCCTAACGCCCTTAACGTACAATGCTCTCATTGGTGCTTGTGCTCGCAATAATGATTTGGAGAAGGCTCTAAATTTGATGTCTAGGATGCGACAGGATGGTTTCCAATCTGATTTTGTCAACTATAGTTTGATAATTCAGTCGCTTACCCGCACGAATAAGATTGATATCCCAATCTTGCAAAAGCTTTACGAAGAGATTGAGTCTGATAAAATTGAGCTCGATGGGCTGCTCCTCAATGATATCATATTGGGCTTTGCGAAAGCTGGAGATCCCAACCGAGCTCTGTATTTCTTGTCCATGGTACAGGCGAGTGGTTTAAACCCCAAAACTTCTACGTTCGTTGCGGTTATTTCTGCATTGGGAAATCATGGACGGACAGAGGAAGCCGAGGCTATATTTGAGGAAATGAAAGAAGGTGGATTGAAACCAAGAATTAAGGCTTTCAATGCACTTCTTAAAGGTTATGCTAGAAAGGGTTCTCTTAAAGAAGCAGAATCTATTGTTTCAGAGATGGAAAAGAGTGGATTATCACCGGACGAGCACACATATGGTCTTCTCGTTGATGCTTATGCAAATGTGGGCAGATGGGAAAGTGCTAGGCATCTGTTGAAACAAATGGAAGCTAGAAATGTACAGCCAAATACCTTTATTTTTAGTAGGATTTTAGCTAGTTATCGAGACCGTGGCGAATGGCAGAAAACATTTGAAGTTTTGAGGGAAATGAAGAACAGTAATGTCAAACCCGATAGGCATTTTTACAACGTCATGATTGATACTTTCGGGAAGTTCAATTGCCTTGATCATGCGATGGAAACATATGACCGGATGCTCTCTGAGGGGATTGAACCAGATGTTGTTACTTGGAACACACTTATAGATTGTCATCGTAAGCACGGATACCACGACAGGGCTGCAGAATTGTTCGAGGAAATGCAGGAGCGTGGTTATTTACCTTGCCCCACAACATATAATATTATGATCAATTCATTGGGCGAGCAGGAAAAGTGGGACGAGGTGAAAATCTTGTTAGGAAAGATGCAGAGTCAGGGGTTACTTCCCAATGTGGTAACATACACTACACTTGTTGATATATATGGACATTCAGGGAGGTTTAACGATGCAATTGACTGCTTGGAGGCCATGAAGTCTGCTGGGTTGAAACCCTCCGCGACAATGTATAATGCCTTAATCAATGCCTTTGCTCAAAGAGTATGTCATCCTTCCCACATTTCATCTCGCAAATCGTTTGTTATAAATTTTATTCTCTGAAAAATTGATAATTATATGTTCTAATTCAAATAAAAAGATATTTGCTGTTGGAATATATTGCCATGTATTATGTTATTTATTCATACTTTTTTCTCTATTGCTGATATGTATTACAAATGGATGGAAAATTTTGGAACAAAATAATATCATACATAGTATCATTGCTTGACGACATGATACTGCTAATCGCCCTATTTCATTTGATCAATTCATTTTTCTTTTCTAAAAAAAACATGATACTGCCAATCATCAGACTCAATGCGAAGTTGAGAAAATTGATGATGCACAATTGTACTGGAATATTGTAAGATGTTTCTTTTGGTTTCCATTTGTGCTTCACGTCTTGATAAACAGATTGAATATGTAATTAAATAGCAGTAATCTTTACATTTAGCAAAAGTTGCATTGTATCCTCTTTCTCAATTAACTTGGCACGTGAGCTACATATTTTTTACTTTTGTGATATTTTTAAAGGTTGCCTATATTTTTTTCTGTTTTGTTATTGGCTATAGTTATTGGGAGCAGAAACAAGTTTACCATACGATTTGGAGCCAATAGTTCTGAGTAATATTTTTGTATGAATGGGCTCATCTGTAATTGGCCGATCACCAGATTTGCCTCTCTAATCATGGTTATAGTCATAAGTTTATGCATCCGAATATACATTTCAAATTGTTCTTGAATATGCATTTAGTGTTCTTCCACTTTATCATTTGGCAGGGTTTGTCAGAGCAGGCAGTAAATGCATATAGAGTTATGATATCAGATGGATTAAGGCCCAGTCTCTTGGCTCTTAATTCATTGATCAATGCATTTGGCGAAGATAGGAGAGACATGGAAGCCTTTTCAATCTTGCAATACATGAAGGAAAATGTAAGTGTAGTGTATTTCAATAACTTCTGCATTTTTCCGTTCTCAAATCAAGAATAAAGCTTTTCCATTCATCACCCAAACTCATTTGGTCGTACAACTGCAGGATGTGAAGCCTGATGTTGTCACATATACAACACTTATGAAAGCTTTGATTCGTGTTGACAAATTTGACAAGGTAGAAGAACATGACCCTCCAGCTTGTTTTTCATAATTTGGTCATGTTATTTTATGCATATATTTTGCTTATTTGGCAAATATGATCTCTGACTATTCATTACATTTGAGCCTACTTAAACGTCTTTTTGTATATAACTATTAACTAGAAAGCATTATTTGAGTTCCAGGTTCCGGCTGTGTATGAAGAGATGATTTTGTCTGGATGTACTCCCGATGGAAAGGCTAGAGCCATGTTGCGATCTGCCCTCAGATACATGAAGCGTACACTAAGCTTGTAGTTGCCCGCTCGATCATGCAACCATGCACCTTGGATTTGCATGATTTGAACCAACCAATACATAGGTACGCACTAAAGGCCTTAAGATGTGATGCTTTTGGCAGTTTCAAAGAATTGGTACCAGAATCTGTAGCGCACTTTCTTGATAAATTGGCATCAAAGTCAACAATTTCTTAATTCATGTGTTGAAATATGAATTGATGTTCATAATTTTATGTACACTGTTTCACCGACTCATGACTAATGTTTTATATCTTCCCTGGAATGGTTTTGCAGGAATTGCCAATTCAAACTGAAACATACCCTCATGATTTGGAGTAAGGTTTGATGTTACACAAATAGTATGGCACTATACCAGCAGAAAGTAGCATTTCTTAAGTAAAACTCTCAATGCTCGCCCCTCCTTTTTCTCCCTGAAATGATACAGATCCGAACCACCCCACCCGACCACCAGATGATGGATCTTAGAAAAACCAGGCAAATCCCCATCTGTTGATCATTCTTGTATTATTGTTTATAACATTCACCATTCTTAGTTATACGGTAAAATGCAGAAGAAATAATTGATCCAAGGACCTCAC

mRNA sequence

CAGACTTACTTTGCCGGCGGCAGGAGTAATCGAGCCTTCATTTCCACTGCCTTGAGAAGGCGCCGTTGCCATTGCAACTTTTCCGATTAACCAAATTCAATTATCCGATAACATGCTTCTTCTTTCACCATTGCCACTCTCCACTCGCTTTCCTGCAACTCATTTATCTTCTCCCGCCGTCTTCCTCCACCACAACCCCCATATTACAACAACCCATCTCTCATTTTCCTTCATCTCCGCCGCCGCTGCAGCCACCTCCTCCTCCGTTGTCACTTGTTACACTTCATCCGACAACCTCGAGTTCGACGTTTTCGAAGACGACCCAGTTTCCCTTCAGAGTCGCCGATACGACTTCACTCCTCTCCTCGACTTCCTTTCCCGGTCTTCGGCCTATCCCAAGTCCGATTCCGATACCGATTCGGAAGTGGAATTTGACTTTACTTTGAACTCTGGTTCTGACTCTGATACAGCTTCTCCGACCTCCCTCGACCCCACCGAGTTTCAGCTTGCTGAGGCCTACAGGGCCGTCCCGGCGCCTCTCTGGCACTCTCTGCTTAAGTCTCTTTGCTCTTCTTCCTCTTCGATTGGGCTAGGTTATGCGGTGGTTTCGTGGCTTCAGAAGCATAATTTGTGTTTCTCTTATGAATTGCTTTACTCGATTCTCATTCATGCACTTGGCCGCTCTGAGAAGCTCTATGAAGCTTTTATTCTCTCCCAGAAGCAAACCCTAACGCCCTTAACGTACAATGCTCTCATTGGTGCTTGTGCTCGCAATAATGATTTGGAGAAGGCTCTAAATTTGATGTCTAGGATGCGACAGGATGGTTTCCAATCTGATTTTGTCAACTATAGTTTGATAATTCAGTCGCTTACCCGCACGAATAAGATTGATATCCCAATCTTGCAAAAGCTTTACGAAGAGATTGAGTCTGATAAAATTGAGCTCGATGGGCTGCTCCTCAATGATATCATATTGGGCTTTGCGAAAGCTGGAGATCCCAACCGAGCTCTGTATTTCTTGTCCATGGTACAGGCGAGTGGTTTAAACCCCAAAACTTCTACGTTCGTTGCGGTTATTTCTGCATTGGGAAATCATGGACGGACAGAGGAAGCCGAGGCTATATTTGAGGAAATGAAAGAAGGTGGATTGAAACCAAGAATTAAGGCTTTCAATGCACTTCTTAAAGGTTATGCTAGAAAGGGTTCTCTTAAAGAAGCAGAATCTATTGTTTCAGAGATGGAAAAGAGTGGATTATCACCGGACGAGCACACATATGGTCTTCTCGTTGATGCTTATGCAAATGTGGGCAGATGGGAAAGTGCTAGGCATCTGTTGAAACAAATGGAAGCTAGAAATGTACAGCCAAATACCTTTATTTTTAGTAGGATTTTAGCTAGTTATCGAGACCGTGGCGAATGGCAGAAAACATTTGAAGTTTTGAGGGAAATGAAGAACAGTAATGTCAAACCCGATAGGCATTTTTACAACGTCATGATTGATACTTTCGGGAAGTTCAATTGCCTTGATCATGCGATGGAAACATATGACCGGATGCTCTCTGAGGGGATTGAACCAGATGTTGTTACTTGGAACACACTTATAGATTGTCATCGTAAGCACGGATACCACGACAGGGCTGCAGAATTGTTCGAGGAAATGCAGGAGCGTGGTTATTTACCTTGCCCCACAACATATAATATTATGATCAATTCATTGGGCGAGCAGGAAAAGTGGGACGAGGTGAAAATCTTGTTAGGAAAGATGCAGAGTCAGGGGTTACTTCCCAATGTGGTAACATACACTACACTTGTTGATATATATGGACATTCAGGGAGGTTTAACGATGCAATTGACTGCTTGGAGGCCATGAAGTCTGCTGGGTTGAAACCCTCCGCGACAATGTATAATGCCTTAATCAATGCCTTTGCTCAAAGAGGTTTGTCAGAGCAGGCAGTAAATGCATATAGAGTTATGATATCAGATGGATTAAGGCCCAGTCTCTTGGCTCTTAATTCATTGATCAATGCATTTGGCGAAGATAGGAGAGACATGGAAGCCTTTTCAATCTTGCAATACATGAAGGAAAATGATGTGAAGCCTGATGTTGTCACATATACAACACTTATGAAAGCTTTGATTCGTGTTGACAAATTTGACAAGGTTCCGGCTGTGTATGAAGAGATGATTTTGTCTGGATGTACTCCCGATGGAAAGGCTAGAGCCATGTTGCGATCTGCCCTCAGATACATGAAGCGTACACTAAGCTTGTAGTTGCCCGCTCGATCATGCAACCATGCACCTTGGATTTGCATGATTTGAACCAACCAATACATAGGAATTGCCAATTCAAACTGAAACATACCCTCATGATTTGGAGTAAGGTTTGATGTTACACAAATAGTATGGCACTATACCAGCAGAAAGTAGCATTTCTTAAGTAAAACTCTCAATGCTCGCCCCTCCTTTTTCTCCCTGAAATGATACAGATCCGAACCACCCCACCCGACCACCAGATGATGGATCTTAGAAAAACCAGGCAAATCCCCATCTGTTGATCATTCTTGTATTATTGTTTATAACATTCACCATTCTTAGTTATACGGTAAAATGCAGAAGAAATAATTGATCCAAGGACCTCAC

Coding sequence (CDS)

ATGCTTCTTCTTTCACCATTGCCACTCTCCACTCGCTTTCCTGCAACTCATTTATCTTCTCCCGCCGTCTTCCTCCACCACAACCCCCATATTACAACAACCCATCTCTCATTTTCCTTCATCTCCGCCGCCGCTGCAGCCACCTCCTCCTCCGTTGTCACTTGTTACACTTCATCCGACAACCTCGAGTTCGACGTTTTCGAAGACGACCCAGTTTCCCTTCAGAGTCGCCGATACGACTTCACTCCTCTCCTCGACTTCCTTTCCCGGTCTTCGGCCTATCCCAAGTCCGATTCCGATACCGATTCGGAAGTGGAATTTGACTTTACTTTGAACTCTGGTTCTGACTCTGATACAGCTTCTCCGACCTCCCTCGACCCCACCGAGTTTCAGCTTGCTGAGGCCTACAGGGCCGTCCCGGCGCCTCTCTGGCACTCTCTGCTTAAGTCTCTTTGCTCTTCTTCCTCTTCGATTGGGCTAGGTTATGCGGTGGTTTCGTGGCTTCAGAAGCATAATTTGTGTTTCTCTTATGAATTGCTTTACTCGATTCTCATTCATGCACTTGGCCGCTCTGAGAAGCTCTATGAAGCTTTTATTCTCTCCCAGAAGCAAACCCTAACGCCCTTAACGTACAATGCTCTCATTGGTGCTTGTGCTCGCAATAATGATTTGGAGAAGGCTCTAAATTTGATGTCTAGGATGCGACAGGATGGTTTCCAATCTGATTTTGTCAACTATAGTTTGATAATTCAGTCGCTTACCCGCACGAATAAGATTGATATCCCAATCTTGCAAAAGCTTTACGAAGAGATTGAGTCTGATAAAATTGAGCTCGATGGGCTGCTCCTCAATGATATCATATTGGGCTTTGCGAAAGCTGGAGATCCCAACCGAGCTCTGTATTTCTTGTCCATGGTACAGGCGAGTGGTTTAAACCCCAAAACTTCTACGTTCGTTGCGGTTATTTCTGCATTGGGAAATCATGGACGGACAGAGGAAGCCGAGGCTATATTTGAGGAAATGAAAGAAGGTGGATTGAAACCAAGAATTAAGGCTTTCAATGCACTTCTTAAAGGTTATGCTAGAAAGGGTTCTCTTAAAGAAGCAGAATCTATTGTTTCAGAGATGGAAAAGAGTGGATTATCACCGGACGAGCACACATATGGTCTTCTCGTTGATGCTTATGCAAATGTGGGCAGATGGGAAAGTGCTAGGCATCTGTTGAAACAAATGGAAGCTAGAAATGTACAGCCAAATACCTTTATTTTTAGTAGGATTTTAGCTAGTTATCGAGACCGTGGCGAATGGCAGAAAACATTTGAAGTTTTGAGGGAAATGAAGAACAGTAATGTCAAACCCGATAGGCATTTTTACAACGTCATGATTGATACTTTCGGGAAGTTCAATTGCCTTGATCATGCGATGGAAACATATGACCGGATGCTCTCTGAGGGGATTGAACCAGATGTTGTTACTTGGAACACACTTATAGATTGTCATCGTAAGCACGGATACCACGACAGGGCTGCAGAATTGTTCGAGGAAATGCAGGAGCGTGGTTATTTACCTTGCCCCACAACATATAATATTATGATCAATTCATTGGGCGAGCAGGAAAAGTGGGACGAGGTGAAAATCTTGTTAGGAAAGATGCAGAGTCAGGGGTTACTTCCCAATGTGGTAACATACACTACACTTGTTGATATATATGGACATTCAGGGAGGTTTAACGATGCAATTGACTGCTTGGAGGCCATGAAGTCTGCTGGGTTGAAACCCTCCGCGACAATGTATAATGCCTTAATCAATGCCTTTGCTCAAAGAGGTTTGTCAGAGCAGGCAGTAAATGCATATAGAGTTATGATATCAGATGGATTAAGGCCCAGTCTCTTGGCTCTTAATTCATTGATCAATGCATTTGGCGAAGATAGGAGAGACATGGAAGCCTTTTCAATCTTGCAATACATGAAGGAAAATGATGTGAAGCCTGATGTTGTCACATATACAACACTTATGAAAGCTTTGATTCGTGTTGACAAATTTGACAAGGTTCCGGCTGTGTATGAAGAGATGATTTTGTCTGGATGTACTCCCGATGGAAAGGCTAGAGCCATGTTGCGATCTGCCCTCAGATACATGAAGCGTACACTAAGCTTGTAG

Protein sequence

MLLLSPLPLSTRFPATHLSSPAVFLHHNPHITTTHLSFSFISAAAAATSSSVVTCYTSSDNLEFDVFEDDPVSLQSRRYDFTPLLDFLSRSSAYPKSDSDTDSEVEFDFTLNSGSDSDTASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSYELLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDGFQSDFVNYSLIIQSLTRTNKIDIPILQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDMEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYMKRTLSL
Homology
BLAST of IVF0003927 vs. ExPASy Swiss-Prot
Match: Q8L844 (Pentatricopeptide repeat-containing protein At5g42310, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRP1 PE=1 SV=1)

HSP 1 Score: 978.8 bits (2529), Expect = 3.3e-284
Identity = 506/724 (69.89%), Postives = 597/724 (82.46%), Query Frame = 0

Query: 1   MLLLSPLPL-STRFPATHLSSPAVFLHHNPHITTTHLSFSFISAAAAA-----TSSSVVT 60
           MLLL   PL STRF + +  +     HH+ H        S  SA  +A     + SS  +
Sbjct: 1   MLLLQQPPLVSTRFHSLYFLTH----HHHHHHRFFQPPISAFSATTSASLPSPSPSSSSS 60

Query: 61  CYTSSDNLEFDVFEDDPVSLQ-SRRYDFTPLLDFLSRSSAYPKSDSDTDSEVEFDFTLNS 120
            ++S + L+ +  ED+  S +  RRYDF+PLL FLSR                 +  L+S
Sbjct: 61  YFSSWNGLDTNEEEDNEFSSEVHRRYDFSPLLKFLSRFG-------------PVELALDS 120

Query: 121 GSDSDTASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNL 180
            S+S+ ASP SL+P EF L E+YRAVPAP WHSL+KSL SS+SS+GL YAVVSWLQKHNL
Sbjct: 121 ESESE-ASPESLNPVEFDLVESYRAVPAPYWHSLIKSLTSSTSSLGLAYAVVSWLQKHNL 180

Query: 181 CFSYELLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSR 240
           CFSYELLYSILIHALGRSEKLYEAF+LSQKQTLTPLTYNALIGACARNND+EKALNL+++
Sbjct: 181 CFSYELLYSILIHALGRSEKLYEAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAK 240

Query: 241 MRQDGFQSDFVNYSLIIQSLTRTNKIDIPILQKLYEEIESDKIELDGLLLNDIILGFAKA 300
           MRQDG+QSDFVNYSL+IQSLTR+NKID  +L +LY+EIE DK+ELD  L+NDII+GFAK+
Sbjct: 241 MRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKS 300

Query: 301 GDPNRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAF 360
           GDP++AL  L M QA+GL+ KT+T V++ISAL + GRT EAEA+FEE+++ G+KPR +A+
Sbjct: 301 GDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAY 360

Query: 361 NALLKGYARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEA 420
           NALLKGY + G LK+AES+VSEMEK G+SPDEHTY LL+DAY N GRWESAR +LK+MEA
Sbjct: 361 NALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEA 420

Query: 421 RNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDH 480
            +VQPN+F+FSR+LA +RDRGEWQKTF+VL+EMK+  VKPDR FYNV+IDTFGKFNCLDH
Sbjct: 421 GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDH 480

Query: 481 AMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMIN 540
           AM T+DRMLSEGIEPD VTWNTLIDCH KHG H  A E+FE M+ RG LPC TTYNIMIN
Sbjct: 481 AMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMIN 540

Query: 541 SLGEQEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKP 600
           S G+QE+WD++K LLGKM+SQG+LPNVVT+TTLVD+YG SGRFNDAI+CLE MKS GLKP
Sbjct: 541 SYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKP 600

Query: 601 SATMYNALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDMEAFSIL 660
           S+TMYNALINA+AQRGLSEQAVNA+RVM SDGL+PSLLALNSLINAFGEDRRD EAF++L
Sbjct: 601 SSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVL 660

Query: 661 QYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYM 718
           QYMKEN VKPDVVTYTTLMKALIRVDKF KVP VYEEMI+SGC PD KAR+MLRSALRYM
Sbjct: 661 QYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSALRYM 706

BLAST of IVF0003927 vs. ExPASy Swiss-Prot
Match: A0A1D6IEG9 (Pentatricopeptide repeat-containing protein CRP1, chloroplastic OS=Zea mays OX=4577 GN=CRP1 PE=1 SV=1)

HSP 1 Score: 675.2 bits (1741), Expect = 7.9e-193
Identity = 360/679 (53.02%), Postives = 473/679 (69.66%), Query Frame = 0

Query: 43  AAAAATSSSVVTCYTSSDNLEFDVFEDDPVSLQSRRYDFTPLLDFLSRSSAYPKSDSDTD 102
           A A  T+SSV    TSS            VS+ + RYDF PLL +LS  S          
Sbjct: 19  APAGCTTSSV----TSSS-----------VSIPASRYDFEPLLAYLSSPSV--------- 78

Query: 103 SEVEFDFTLNSGSDSDTASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGY 162
                     S S +  + P S+   E +LA +Y AVP+  WH+LL+ L +S +S+ L +
Sbjct: 79  ----------SASLTSPSPPASVPAPEHRLAASYSAVPSHEWHALLRDLAASDASLPLAF 138

Query: 163 AVVSWLQKHNLCFSYELLYSILIHALGRSEKLY-EAFILSQKQTL----TPLTYNALIGA 222
           A++ +L +H LCF  +LL S L+H+L  S +L   + +LS   +L    +PL  N+L+ A
Sbjct: 139 ALLPFLHRHRLCFPLDLLLSSLLHSLSVSGRLLPHSLLLSFPPSLSDPPSPLLLNSLLAA 198

Query: 223 CARNNDLEKALNLMSRMRQDGFQSDFVNYSLIIQSLTRT-NKIDIPILQKLYEEIESDKI 282
            A  +    AL L+S +R+  F  D  +YS ++ SL  T +  D  +L++L  ++   ++
Sbjct: 199 SAAASRPAVALRLLSLLREHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRL 258

Query: 283 ELDGLLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEA 342
           E D  L +D+I  FA+A  P+ AL  L+  QA GL P+++   A+ISALG  GR  EAEA
Sbjct: 259 EPDAPLFSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEA 318

Query: 343 IF-EEMKEGGLKPRIKAFNALLKGYARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAY 402
           +F E    G +KPR +A+NALLKGY R  SLK AE ++ EM + G++PDE TY LLVDAY
Sbjct: 319 LFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAY 378

Query: 403 ANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDR 462
              GRWESAR LLK+MEA  V+P++++FSRILA +RDRG+WQK F VLREM+ S V+PDR
Sbjct: 379 TRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDR 438

Query: 463 HFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEE 522
           HFYNVMIDTFGK+NCL HAM+ +++M  EGIEPDVVTWNTLID H K G HDRAAELFEE
Sbjct: 439 HFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEE 498

Query: 523 MQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGR 582
           M+E    P  TTYNIMIN LGEQE W+ V+ +L +M+ QGL+PN++TYTTLVD+YG SGR
Sbjct: 499 MRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGR 558

Query: 583 FNDAIDCLEAMKSAGLKPSATMYNALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNS 642
           + +AIDC+EAMK+ GLKPS TMY+AL+NA+AQRGL++ A+N  + M +DGL  S+L LNS
Sbjct: 559 YKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNS 618

Query: 643 LINAFGEDRRDMEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSG 702
           LINAFGEDRR +EAFS+LQ+M+EN ++PDV+TYTTLMKALIRV++FDKVP +YEEMI SG
Sbjct: 619 LINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSG 663

Query: 703 CTPDGKARAMLRSALRYMK 715
           C PD KARAMLRS L+Y+K
Sbjct: 679 CAPDRKARAMLRSGLKYIK 663

BLAST of IVF0003927 vs. ExPASy Swiss-Prot
Match: Q84ZD2 (Pentatricopeptide repeat-containing protein CRP1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0548300 PE=3 SV=1)

HSP 1 Score: 669.5 bits (1726), Expect = 4.3e-191
Identity = 349/650 (53.69%), Postives = 460/650 (70.77%), Query Frame = 0

Query: 73  SLQSRRYDFTPLLDFLSRSSAYPKSDSDTDSEVEFDFTLNSGSDSDTASPTSLDP-TEFQ 132
           S  + RYDF PLL +LS +S+ P                       +  PTS+ P TE +
Sbjct: 30  SPSATRYDFDPLLSYLSTTSSSP-----------------------SPPPTSVLPVTESR 89

Query: 133 LAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSYELLYSILIHALGRS 192
           LA +Y AVPA  WH+LL+ L ++ +S+ L +A++ +L +H LCF  +LL S L+H+L  S
Sbjct: 90  LAASYAAVPAREWHALLRELAATDASLPLAFALLPFLHRHRLCFPLDLLLSSLLHSLSVS 149

Query: 193 EKLY-EAFILSQKQTL----TPLTYNALIGACARNNDLEKALNLMSRMRQDGFQSDFVNY 252
            +L   + +LS   +L    +PL  N+L+ A A  +    AL L+  +R+  F  D  +Y
Sbjct: 150 GRLLPHSLLLSFPPSLSDPPSPLLLNSLLAASAAASRPAVALRLLGLLREHSFLPDLASY 209

Query: 253 SLIIQSLTRT-NKIDIPILQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNRALYFLSM 312
           S ++ SL  T +  D  +L +L  ++   ++E D  L +D+I  FA+A  P+ AL  L+ 
Sbjct: 210 SHLLASLLNTRDPPDAALLDRLLGDLRESRLEPDAPLFSDLISAFARARLPDAALELLAS 269

Query: 313 VQASGLNPKTSTFVAVISALGNHGRTEEAEAIF-EEMKEGGLKPRIKAFNALLKGYARKG 372
            QA GL P+++   A+IS+LG+  R  EAEA+F E    G +KPR +A+NALLKGY + G
Sbjct: 270 AQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIG 329

Query: 373 SLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFS 432
           SLK AE ++ EM + G++PDE TY LLVDAY   GRWESAR LLK+MEA  V+P++++FS
Sbjct: 330 SLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFS 389

Query: 433 RILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSE 492
           RILA +RDRGEWQK F VLREM  S V+PDRHFYNVMIDTFGK+NCL HAM+ +DRM  E
Sbjct: 390 RILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREE 449

Query: 493 GIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEV 552
           GIEPDVVTWNTLID H K G HDRA ELF+EM+E       TTYNIMIN LGE+++W+ V
Sbjct: 450 GIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGV 509

Query: 553 KILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINA 612
           + +L +M+ QGL+PN++TYTTLVD+YG SGRF +A+DC+EAMK+ GLKPS TMY+AL+NA
Sbjct: 510 EAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLKPSPTMYHALVNA 569

Query: 613 FAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDMEAFSILQYMKENDVKPD 672
           +AQRGL++ A+N  + M +DGL  S + LNSLINAFGEDRR  EAFS+LQ+MKEN ++PD
Sbjct: 570 YAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPD 629

Query: 673 VVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYMK 715
           V+TYTTLMKALIRV++F+KVP +YEEMI SGC PD KARAMLRSALRYMK
Sbjct: 630 VITYTTLMKALIRVEQFEKVPVIYEEMITSGCAPDRKARAMLRSALRYMK 656

BLAST of IVF0003927 vs. ExPASy Swiss-Prot
Match: B8Y6I0 (Pentatricopeptide repeat-containing protein 10, chloroplastic OS=Zea mays OX=4577 GN=PPR10 PE=1 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 8.8e-59
Identity = 155/596 (26.01%), Postives = 263/596 (44.13%), Query Frame = 0

Query: 146 SLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSYELLYSILIHALGRSEKLYEAFILSQKQT 205
           SLLK+L   S       A++ W  K     +  L   +++ ALGR  +      L  +  
Sbjct: 109 SLLKAL-ELSGHWEWALALLRWAGKEGAADASAL--EMVVRALGREGQHDAVCALLDETP 168

Query: 206 LTP------LTYNALIGACARNNDLEKALNLMSRMRQDGFQSDFVNYSLIIQSLTRTNKI 265
           L P        Y  ++ A +R    E+AL L + +R+ G     V Y++++    R  + 
Sbjct: 169 LPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGR- 228

Query: 266 DIPILQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFV 325
             P +  L +E+ +  +E DG   + +I    + G  + A+ F   ++A G  P   T+ 
Sbjct: 229 SWPRIVALLDEMRAAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYN 288

Query: 326 AVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAESIVSEMEKS 385
           A++   G  G   EA  +  EM++ G +P    +N L   YAR G  +EA   +  M   
Sbjct: 289 ALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASK 348

Query: 386 GLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKT 445
           GL P+  TY  ++ AY NVG+ + A  L  QM+     PN   ++ +L     +  +   
Sbjct: 349 GLLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVM 408

Query: 446 FEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDC 505
            E+L EM  S   P+R  +N M+   GK    D+     + M S G+E    T+NTLI  
Sbjct: 409 LEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAA 468

Query: 506 HRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPN 565
           + + G    A +++ EM   G+ PC TTYN ++N L  Q  W   + ++ KM+++G  PN
Sbjct: 469 YGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPN 528

Query: 566 VVTYTTLVDIYGHSG------------------------------------RFNDAIDCL 625
             +Y+ L+  Y   G                                    R +      
Sbjct: 529 EQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAF 588

Query: 626 EAMKSAGLKPSATMYNALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGED 685
           + +K+ G  P   ++N++++ +A+ G+  +A   +  +   GL P L+  NSL++ + + 
Sbjct: 589 QEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKC 648

Query: 686 RRDMEAFSILQYMK-ENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTP 699
               EA  IL  +K    +KPDVV+Y T++    +     +   V  EM+  G  P
Sbjct: 649 SESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVADGMAP 700

BLAST of IVF0003927 vs. ExPASy Swiss-Prot
Match: Q76C99 (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 1.1e-56
Identity = 150/569 (26.36%), Postives = 260/569 (45.69%), Query Frame = 0

Query: 139 VPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSYELLYSILIHALGRSEKLYEAF 198
           V A  +  LLK LC+   +      V+  + +   C      Y+IL+  L    +  EA 
Sbjct: 120 VDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELG-CIPNVFSYNILLKGLCDENRSQEAL 179

Query: 199 ILSQKQT--------LTPLTYNALIGACARNNDLEKALNLMSRMRQDGFQSDFVNYSLII 258
            L                ++Y  +I    +  D +KA +    M   G   D V Y+ II
Sbjct: 180 ELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSII 239

Query: 259 QSLTRTNKIDIPILQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNRALYFLSMVQASG 318
            +L +   +D  +  ++   +  + +  D +  N I+ G+  +G P  A+ FL  +++ G
Sbjct: 240 AALCKAQAMDKAM--EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG 299

Query: 319 LNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAE 378
           + P   T+  ++  L  +GR  EA  IF+ M + GLKP I  +  LL+GYA KG+L E  
Sbjct: 300 VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMH 359

Query: 379 SIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASY 438
            ++  M ++G+ PD + + +L+ AYA  G+ + A  +  +M  + + PN   +  ++   
Sbjct: 360 GLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGIL 419

Query: 439 RDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDV 498
              G  +       +M +  + P    YN +I      N  + A E    ML  GI  + 
Sbjct: 420 CKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNT 479

Query: 499 VTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGK 558
           + +N++ID H K G    + +LFE M   G  P   TYN +IN      K DE   LL  
Sbjct: 480 IFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSG 539

Query: 559 MQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAFAQRGL 618
           M S GL PN VTY+TL++ Y    R  DA+   + M+S+G+ P    YN ++    Q   
Sbjct: 540 MVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRR 599

Query: 619 SEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDMEAFSILQYMKENDVKPDVVTYTT 678
           +  A   Y  +   G +  L   N +++   +++   +A  + Q +   D+K +  T+  
Sbjct: 600 TAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNI 659

Query: 679 LMKALIRVDKFDKVPAVYEEMILSGCTPD 700
           ++ AL++V + D+   ++     +G  P+
Sbjct: 660 MIDALLKVGRNDEAKDLFVAFSSNGLVPN 685

BLAST of IVF0003927 vs. ExPASy TrEMBL
Match: A0A5A7T6H7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold119G00250 PE=4 SV=1)

HSP 1 Score: 1414.8 bits (3661), Expect = 0.0e+00
Identity = 719/719 (100.00%), Postives = 719/719 (100.00%), Query Frame = 0

Query: 1   MLLLSPLPLSTRFPATHLSSPAVFLHHNPHITTTHLSFSFISAAAAATSSSVVTCYTSSD 60
           MLLLSPLPLSTRFPATHLSSPAVFLHHNPHITTTHLSFSFISAAAAATSSSVVTCYTSSD
Sbjct: 1   MLLLSPLPLSTRFPATHLSSPAVFLHHNPHITTTHLSFSFISAAAAATSSSVVTCYTSSD 60

Query: 61  NLEFDVFEDDPVSLQSRRYDFTPLLDFLSRSSAYPKSDSDTDSEVEFDFTLNSGSDSDTA 120
           NLEFDVFEDDPVSLQSRRYDFTPLLDFLSRSSAYPKSDSDTDSEVEFDFTLNSGSDSDTA
Sbjct: 61  NLEFDVFEDDPVSLQSRRYDFTPLLDFLSRSSAYPKSDSDTDSEVEFDFTLNSGSDSDTA 120

Query: 121 SPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSYELL 180
           SPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSYELL
Sbjct: 121 SPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSYELL 180

Query: 181 YSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDGFQ 240
           YSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDGFQ
Sbjct: 181 YSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDGFQ 240

Query: 241 SDFVNYSLIIQSLTRTNKIDIPILQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNRAL 300
           SDFVNYSLIIQSLTRTNKIDIPILQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNRAL
Sbjct: 241 SDFVNYSLIIQSLTRTNKIDIPILQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNRAL 300

Query: 301 YFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGY 360
           YFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGY
Sbjct: 301 YFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGY 360

Query: 361 ARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNT 420
           ARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNT
Sbjct: 361 ARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNT 420

Query: 421 FIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDR 480
           FIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDR
Sbjct: 421 FIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDR 480

Query: 481 MLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEK 540
           MLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEK
Sbjct: 481 MLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEK 540

Query: 541 WDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNA 600
           WDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNA
Sbjct: 541 WDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNA 600

Query: 601 LINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDMEAFSILQYMKEND 660
           LINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDMEAFSILQYMKEND
Sbjct: 601 LINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDMEAFSILQYMKEND 660

Query: 661 VKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYMKRTLSL 720
           VKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYMKRTLSL
Sbjct: 661 VKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYMKRTLSL 719

BLAST of IVF0003927 vs. ExPASy TrEMBL
Match: A0A1S3CMJ2 (pentatricopeptide repeat-containing protein At5g42310, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103502629 PE=4 SV=1)

HSP 1 Score: 1410.2 bits (3649), Expect = 0.0e+00
Identity = 719/720 (99.86%), Postives = 719/720 (99.86%), Query Frame = 0

Query: 1   MLLLSPLPLSTRFPATHLSSPAVFL-HHNPHITTTHLSFSFISAAAAATSSSVVTCYTSS 60
           MLLLSPLPLSTRFPATHLSSPAVFL HHNPHITTTHLSFSFISAAAAATSSSVVTCYTSS
Sbjct: 1   MLLLSPLPLSTRFPATHLSSPAVFLHHHNPHITTTHLSFSFISAAAAATSSSVVTCYTSS 60

Query: 61  DNLEFDVFEDDPVSLQSRRYDFTPLLDFLSRSSAYPKSDSDTDSEVEFDFTLNSGSDSDT 120
           DNLEFDVFEDDPVSLQSRRYDFTPLLDFLSRSSAYPKSDSDTDSEVEFDFTLNSGSDSDT
Sbjct: 61  DNLEFDVFEDDPVSLQSRRYDFTPLLDFLSRSSAYPKSDSDTDSEVEFDFTLNSGSDSDT 120

Query: 121 ASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSYEL 180
           ASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSYEL
Sbjct: 121 ASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSYEL 180

Query: 181 LYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDGF 240
           LYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDGF
Sbjct: 181 LYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDGF 240

Query: 241 QSDFVNYSLIIQSLTRTNKIDIPILQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNRA 300
           QSDFVNYSLIIQSLTRTNKIDIPILQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNRA
Sbjct: 241 QSDFVNYSLIIQSLTRTNKIDIPILQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNRA 300

Query: 301 LYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKG 360
           LYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKG
Sbjct: 301 LYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKG 360

Query: 361 YARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPN 420
           YARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPN
Sbjct: 361 YARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPN 420

Query: 421 TFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYD 480
           TFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYD
Sbjct: 421 TFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYD 480

Query: 481 RMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQE 540
           RMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQE
Sbjct: 481 RMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQE 540

Query: 541 KWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYN 600
           KWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYN
Sbjct: 541 KWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYN 600

Query: 601 ALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDMEAFSILQYMKEN 660
           ALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDMEAFSILQYMKEN
Sbjct: 601 ALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDMEAFSILQYMKEN 660

Query: 661 DVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYMKRTLSL 720
           DVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYMKRTLSL
Sbjct: 661 DVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYMKRTLSL 720

BLAST of IVF0003927 vs. ExPASy TrEMBL
Match: A0A0A0KCZ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G358090 PE=4 SV=1)

HSP 1 Score: 1377.5 bits (3564), Expect = 0.0e+00
Identity = 701/721 (97.23%), Postives = 710/721 (98.47%), Query Frame = 0

Query: 1   MLLLSPLPLSTRFPATHLSSPAVFL--HHNPHITTTHLSFSFISAAAAATSSSVVTCYTS 60
           MLLLSPLPLSTRFPATHLSSP VFL  HHNPHI TTHLSFSF S A A +SSS+VTCYTS
Sbjct: 1   MLLLSPLPLSTRFPATHLSSPPVFLHHHHNPHIATTHLSFSFFS-APATSSSSLVTCYTS 60

Query: 61  SDNLEFDVFEDDPVSLQSRRYDFTPLLDFLSRSSAYPKSDSDTDSEVEFDFTLNSGSDSD 120
           SDNLEFDVFE+DPVSLQSRRYDFTPLLDFLSRSSAYPK DSD+DSEVEFD T NSGSDSD
Sbjct: 61  SDNLEFDVFENDPVSLQSRRYDFTPLLDFLSRSSAYPKFDSDSDSEVEFDSTFNSGSDSD 120

Query: 121 TASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSYE 180
           TASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQ+HNLCFSYE
Sbjct: 121 TASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQRHNLCFSYE 180

Query: 181 LLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDG 240
           LLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDG
Sbjct: 181 LLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDG 240

Query: 241 FQSDFVNYSLIIQSLTRTNKIDIPILQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNR 300
           FQSDF+NYSLIIQSLTRTNKIDIP+LQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNR
Sbjct: 241 FQSDFINYSLIIQSLTRTNKIDIPLLQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNR 300

Query: 301 ALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLK 360
           ALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLK
Sbjct: 301 ALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLK 360

Query: 361 GYARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQP 420
           GYARKGSLKEAESI+SEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQP
Sbjct: 361 GYARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQP 420

Query: 421 NTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETY 480
           NTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETY
Sbjct: 421 NTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETY 480

Query: 481 DRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQ 540
           DRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQ
Sbjct: 481 DRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQ 540

Query: 541 EKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMY 600
           EKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMY
Sbjct: 541 EKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMY 600

Query: 601 NALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDMEAFSILQYMKE 660
           NALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRD+EAFSILQYMKE
Sbjct: 601 NALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDIEAFSILQYMKE 660

Query: 661 NDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYMKRTLS 720
           NDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYMKRTLS
Sbjct: 661 NDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYMKRTLS 720

BLAST of IVF0003927 vs. ExPASy TrEMBL
Match: A0A6J1KKB7 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111493938 PE=4 SV=1)

HSP 1 Score: 1292.3 bits (3343), Expect = 0.0e+00
Identity = 661/721 (91.68%), Postives = 685/721 (95.01%), Query Frame = 0

Query: 1   MLLLSPLPLSTRFPATHLSSPAVFLHHNPHITTTHLSFSFISAAAAATS--SSVVTCYTS 60
           MLLLSPLPLSTRFPAT L SP VFLHH     TTHLSF  ISAAAA T+  SSVVTC TS
Sbjct: 1   MLLLSPLPLSTRFPATQLPSPTVFLHHQNPPITTHLSFPIISAAAATTASFSSVVTCSTS 60

Query: 61  SDNLEFDVFEDDPVSLQSRRYDFTPLLDFLSRSSAYPKSDSDTDSEVEFDFTLNSGSDSD 120
           SD LE DVFE+D VS QSRRYDFTPLLDFLSRS AYPKSDS  DSEVEFD  L+S S+SD
Sbjct: 61  SDALELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDS--DSEVEFDSVLDSDSESD 120

Query: 121 TASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSYE 180
            ASPTSLDPTEFQLAE YRAVPAPLWHSLLKSLC+SSSSIGLGYAVV WLQKHNLCFSYE
Sbjct: 121 KASPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFSYE 180

Query: 181 LLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDG 240
           LLYSILIHALGRSEKLYEAFILSQ QTLTPLTYNALIGACARNND EKALNL+SRMRQDG
Sbjct: 181 LLYSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQDG 240

Query: 241 FQSDFVNYSLIIQSLTRTNKIDIPILQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNR 300
           +QSDFVNYSLIIQSLTRTNKID+PILQKLYEEIESDKIELDG LLNDIILGFAKAGDPNR
Sbjct: 241 YQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNR 300

Query: 301 ALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLK 360
           ALYFLSMVQASGLNPKTSTFVA+ISALGN+GRTEEAEAIFEEMKEGGLKPRIKAFNALLK
Sbjct: 301 ALYFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALLK 360

Query: 361 GYARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQP 420
           GYA+KGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVG W+SAR LLKQMEARNVQP
Sbjct: 361 GYAKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQP 420

Query: 421 NTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETY 480
           NTFIFSRILASYRDRGEWQKTFEVLREMKN NVKPDRHFYNVMIDTFGKFNC+DHAMETY
Sbjct: 421 NTFIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMETY 480

Query: 481 DRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQ 540
           +RMLSEGIEPDVVTWNTLIDCHRKHGYH+RAAELFEEMQERGY PCPTTYNIMINSLGEQ
Sbjct: 481 ERMLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGEQ 540

Query: 541 EKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMY 600
           EKWDEVKILLGKMQSQGLLPNV+TYTTLVDIYG SGRFNDAI+CLEAMKSAGLKPS+TMY
Sbjct: 541 EKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMY 600

Query: 601 NALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDMEAFSILQYMKE 660
           NALINAFAQ+GLSEQAVNAYRVM SDGL+PSLLALNSLINAFGEDRRD+EAF+ILQYMKE
Sbjct: 601 NALINAFAQKGLSEQAVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYMKE 660

Query: 661 NDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYMKRTLS 720
           NDVKPDVVTYTTLMKALIRV+KFDKVPAVYEEMILSGCTPDGKARAMLRSAL+YMKRTLS
Sbjct: 661 NDVKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRSALKYMKRTLS 719

BLAST of IVF0003927 vs. ExPASy TrEMBL
Match: A0A6J1G3R4 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111450509 PE=4 SV=1)

HSP 1 Score: 1291.6 bits (3341), Expect = 0.0e+00
Identity = 660/721 (91.54%), Postives = 685/721 (95.01%), Query Frame = 0

Query: 1   MLLLSPLPLSTRFPATHLSSPAVFLHHNPHITTTHLSFSFISAAAAATS--SSVVTCYTS 60
           MLLLSPLPLSTRFPAT L SP VFLHH     TTHLSF  ISAAAA T+  SSVVTC TS
Sbjct: 1   MLLLSPLPLSTRFPATQLPSPTVFLHHQNPPITTHLSFPIISAAAATTTSFSSVVTCSTS 60

Query: 61  SDNLEFDVFEDDPVSLQSRRYDFTPLLDFLSRSSAYPKSDSDTDSEVEFDFTLNSGSDSD 120
           SD LE DVFE+D VS QSRRYDFTPLLDFLSRS AYPKSDS  DSEVEFD  L+S S+SD
Sbjct: 61  SDALELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDS--DSEVEFDSVLDSDSESD 120

Query: 121 TASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSYE 180
            ASPTSLDPTEFQLAE YRAVPAPLWHSLLKSLC+SSSSIGLGYAVV WLQKHNLCFSYE
Sbjct: 121 KASPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFSYE 180

Query: 181 LLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDG 240
           LLYSILIHALGRSEKLYEAFILSQ QTLTPLTYNALIGACARNND EKALNL+SRMRQDG
Sbjct: 181 LLYSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQDG 240

Query: 241 FQSDFVNYSLIIQSLTRTNKIDIPILQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNR 300
           +QSDFVNYSLIIQSLTRTNKID+PILQKLYEEIESDKIELDG LLNDIILGFAKAGDPNR
Sbjct: 241 YQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNR 300

Query: 301 ALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLK 360
           ALYFLSMVQASGLNPKTSTFVA+ISALGN+GRTEEAEAIFEEMKEGGLKPRIKAFNALLK
Sbjct: 301 ALYFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALLK 360

Query: 361 GYARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQP 420
           GYA+KGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVG W+SAR LLKQMEARNVQP
Sbjct: 361 GYAKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQP 420

Query: 421 NTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETY 480
           NTFIFSRILASYRDRGEWQKTFEVLREMKN NVKPDRHFYNVMIDTFGKFNC+DHAMETY
Sbjct: 421 NTFIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMETY 480

Query: 481 DRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQ 540
           +RMLSEGIEPDVVTWNTLIDCHRKHGYH+RAAELFEEMQERGY PCPTTYNIMINSLGEQ
Sbjct: 481 ERMLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGEQ 540

Query: 541 EKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMY 600
           EKWDEVK+LLGKMQSQGLLPNV+TYTTLVDIYG SGRFNDAI+CLEAMKSAGLKPS+TMY
Sbjct: 541 EKWDEVKLLLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMY 600

Query: 601 NALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDMEAFSILQYMKE 660
           NALINAFAQ+GLSEQAVNAYRVM SDGL+PSLLALNSLINAFGEDRRD+EAF+ILQYMKE
Sbjct: 601 NALINAFAQKGLSEQAVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYMKE 660

Query: 661 NDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYMKRTLS 720
           NDVKPDVVTYTTLMKALIRV+KFDKVPAVYEEMILSGCTPDGKARAMLRSAL+YMKRTLS
Sbjct: 661 NDVKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRSALKYMKRTLS 719

BLAST of IVF0003927 vs. NCBI nr
Match: KAA0038458.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1417 bits (3668), Expect = 0.0
Identity = 719/719 (100.00%), Postives = 719/719 (100.00%), Query Frame = 0

Query: 1   MLLLSPLPLSTRFPATHLSSPAVFLHHNPHITTTHLSFSFISAAAAATSSSVVTCYTSSD 60
           MLLLSPLPLSTRFPATHLSSPAVFLHHNPHITTTHLSFSFISAAAAATSSSVVTCYTSSD
Sbjct: 1   MLLLSPLPLSTRFPATHLSSPAVFLHHNPHITTTHLSFSFISAAAAATSSSVVTCYTSSD 60

Query: 61  NLEFDVFEDDPVSLQSRRYDFTPLLDFLSRSSAYPKSDSDTDSEVEFDFTLNSGSDSDTA 120
           NLEFDVFEDDPVSLQSRRYDFTPLLDFLSRSSAYPKSDSDTDSEVEFDFTLNSGSDSDTA
Sbjct: 61  NLEFDVFEDDPVSLQSRRYDFTPLLDFLSRSSAYPKSDSDTDSEVEFDFTLNSGSDSDTA 120

Query: 121 SPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSYELL 180
           SPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSYELL
Sbjct: 121 SPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSYELL 180

Query: 181 YSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDGFQ 240
           YSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDGFQ
Sbjct: 181 YSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDGFQ 240

Query: 241 SDFVNYSLIIQSLTRTNKIDIPILQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNRAL 300
           SDFVNYSLIIQSLTRTNKIDIPILQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNRAL
Sbjct: 241 SDFVNYSLIIQSLTRTNKIDIPILQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNRAL 300

Query: 301 YFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGY 360
           YFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGY
Sbjct: 301 YFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGY 360

Query: 361 ARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNT 420
           ARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNT
Sbjct: 361 ARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNT 420

Query: 421 FIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDR 480
           FIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDR
Sbjct: 421 FIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDR 480

Query: 481 MLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEK 540
           MLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEK
Sbjct: 481 MLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEK 540

Query: 541 WDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNA 600
           WDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNA
Sbjct: 541 WDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNA 600

Query: 601 LINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDMEAFSILQYMKEND 660
           LINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDMEAFSILQYMKEND
Sbjct: 601 LINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDMEAFSILQYMKEND 660

Query: 661 VKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYMKRTLSL 719
           VKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYMKRTLSL
Sbjct: 661 VKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYMKRTLSL 719

BLAST of IVF0003927 vs. NCBI nr
Match: XP_008464858.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial [Cucumis melo])

HSP 1 Score: 1412 bits (3656), Expect = 0.0
Identity = 719/720 (99.86%), Postives = 719/720 (99.86%), Query Frame = 0

Query: 1   MLLLSPLPLSTRFPATHLSSPAVFLHH-NPHITTTHLSFSFISAAAAATSSSVVTCYTSS 60
           MLLLSPLPLSTRFPATHLSSPAVFLHH NPHITTTHLSFSFISAAAAATSSSVVTCYTSS
Sbjct: 1   MLLLSPLPLSTRFPATHLSSPAVFLHHHNPHITTTHLSFSFISAAAAATSSSVVTCYTSS 60

Query: 61  DNLEFDVFEDDPVSLQSRRYDFTPLLDFLSRSSAYPKSDSDTDSEVEFDFTLNSGSDSDT 120
           DNLEFDVFEDDPVSLQSRRYDFTPLLDFLSRSSAYPKSDSDTDSEVEFDFTLNSGSDSDT
Sbjct: 61  DNLEFDVFEDDPVSLQSRRYDFTPLLDFLSRSSAYPKSDSDTDSEVEFDFTLNSGSDSDT 120

Query: 121 ASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSYEL 180
           ASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSYEL
Sbjct: 121 ASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSYEL 180

Query: 181 LYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDGF 240
           LYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDGF
Sbjct: 181 LYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDGF 240

Query: 241 QSDFVNYSLIIQSLTRTNKIDIPILQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNRA 300
           QSDFVNYSLIIQSLTRTNKIDIPILQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNRA
Sbjct: 241 QSDFVNYSLIIQSLTRTNKIDIPILQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNRA 300

Query: 301 LYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKG 360
           LYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKG
Sbjct: 301 LYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKG 360

Query: 361 YARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPN 420
           YARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPN
Sbjct: 361 YARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPN 420

Query: 421 TFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYD 480
           TFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYD
Sbjct: 421 TFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYD 480

Query: 481 RMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQE 540
           RMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQE
Sbjct: 481 RMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQE 540

Query: 541 KWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYN 600
           KWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYN
Sbjct: 541 KWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYN 600

Query: 601 ALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDMEAFSILQYMKEN 660
           ALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDMEAFSILQYMKEN
Sbjct: 601 ALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDMEAFSILQYMKEN 660

Query: 661 DVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYMKRTLSL 719
           DVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYMKRTLSL
Sbjct: 661 DVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYMKRTLSL 720

BLAST of IVF0003927 vs. NCBI nr
Match: XP_004144287.1 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic [Cucumis sativus] >KGN47545.1 hypothetical protein Csa_019043 [Cucumis sativus])

HSP 1 Score: 1380 bits (3572), Expect = 0.0
Identity = 701/721 (97.23%), Postives = 710/721 (98.47%), Query Frame = 0

Query: 1   MLLLSPLPLSTRFPATHLSSPAVFLHH--NPHITTTHLSFSFISAAAAATSSSVVTCYTS 60
           MLLLSPLPLSTRFPATHLSSP VFLHH  NPHI TTHLSFSF SA A + SSS+VTCYTS
Sbjct: 1   MLLLSPLPLSTRFPATHLSSPPVFLHHHHNPHIATTHLSFSFFSAPATS-SSSLVTCYTS 60

Query: 61  SDNLEFDVFEDDPVSLQSRRYDFTPLLDFLSRSSAYPKSDSDTDSEVEFDFTLNSGSDSD 120
           SDNLEFDVFE+DPVSLQSRRYDFTPLLDFLSRSSAYPK DSD+DSEVEFD T NSGSDSD
Sbjct: 61  SDNLEFDVFENDPVSLQSRRYDFTPLLDFLSRSSAYPKFDSDSDSEVEFDSTFNSGSDSD 120

Query: 121 TASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSYE 180
           TASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQ+HNLCFSYE
Sbjct: 121 TASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQRHNLCFSYE 180

Query: 181 LLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDG 240
           LLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDG
Sbjct: 181 LLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDG 240

Query: 241 FQSDFVNYSLIIQSLTRTNKIDIPILQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNR 300
           FQSDF+NYSLIIQSLTRTNKIDIP+LQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNR
Sbjct: 241 FQSDFINYSLIIQSLTRTNKIDIPLLQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNR 300

Query: 301 ALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLK 360
           ALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLK
Sbjct: 301 ALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLK 360

Query: 361 GYARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQP 420
           GYARKGSLKEAESI+SEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQP
Sbjct: 361 GYARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQP 420

Query: 421 NTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETY 480
           NTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETY
Sbjct: 421 NTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETY 480

Query: 481 DRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQ 540
           DRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQ
Sbjct: 481 DRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQ 540

Query: 541 EKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMY 600
           EKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMY
Sbjct: 541 EKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMY 600

Query: 601 NALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDMEAFSILQYMKE 660
           NALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRD+EAFSILQYMKE
Sbjct: 601 NALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDIEAFSILQYMKE 660

Query: 661 NDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYMKRTLS 719
           NDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYMKRTLS
Sbjct: 661 NDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYMKRTLS 720

BLAST of IVF0003927 vs. NCBI nr
Match: XP_038883964.1 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 1342 bits (3473), Expect = 0.0
Identity = 686/720 (95.28%), Postives = 697/720 (96.81%), Query Frame = 0

Query: 1   MLLLSPLPLSTRFPATHLSSPAVFLHH-NPHITTTHLSFSFISAAAAATSSSVVTCYTSS 60
           MLLLSPLPLSTRFP     SP VFLHH NPHITTTHL F FISA A  TSSSVVTCYTSS
Sbjct: 1   MLLLSPLPLSTRFPVIQFPSPTVFLHHQNPHITTTHLPFPFISATAT-TSSSVVTCYTSS 60

Query: 61  DNLEFDVFEDDPVSLQSRRYDFTPLLDFLSRSSAYPKSDSDTDSEVEFDFTLNSGSDSDT 120
           D LE DVFE+DPVSLQSR YDFTPLLDFLSRSS YPKSDSD  SEVEF+ TLNSGSDSDT
Sbjct: 61  DALELDVFENDPVSLQSRHYDFTPLLDFLSRSSLYPKSDSD--SEVEFNSTLNSGSDSDT 120

Query: 121 ASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSYEL 180
           ASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSYEL
Sbjct: 121 ASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSYEL 180

Query: 181 LYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDGF 240
           LYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDG+
Sbjct: 181 LYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDGY 240

Query: 241 QSDFVNYSLIIQSLTRTNKIDIPILQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNRA 300
           QSDFVNYSLIIQSLTRTNKID+PILQKLYEEIESDKIELDG LLNDIILGFAKAGDPNRA
Sbjct: 241 QSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNRA 300

Query: 301 LYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKG 360
           LYFLSMVQASGLNPKTSTFVA+ISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKG
Sbjct: 301 LYFLSMVQASGLNPKTSTFVAIISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKG 360

Query: 361 YARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPN 420
           YARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPN
Sbjct: 361 YARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPN 420

Query: 421 TFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYD 480
           +FIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYD
Sbjct: 421 SFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYD 480

Query: 481 RMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQE 540
           RMLSEGIEPDVVTWNTLIDCH KHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQE
Sbjct: 481 RMLSEGIEPDVVTWNTLIDCHCKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQE 540

Query: 541 KWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYN 600
           KWDEVKILLGKMQSQGLLPNV+TYTTLVDIYG SGRFNDAI+CLEAMKSAGLKPS+TMYN
Sbjct: 541 KWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMYN 600

Query: 601 ALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDMEAFSILQYMKEN 660
           ALINAFAQRGLSEQAVNAYRVM SDGL+PSLLALNSLINAFGEDRRD+EAFSILQYMKEN
Sbjct: 601 ALINAFAQRGLSEQAVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFSILQYMKEN 660

Query: 661 DVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYMKRTLSL 719
           DVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYMKRTLSL
Sbjct: 661 DVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYMKRTLSL 717

BLAST of IVF0003927 vs. NCBI nr
Match: XP_023546092.1 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023546093.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1295 bits (3351), Expect = 0.0
Identity = 664/722 (91.97%), Postives = 689/722 (95.43%), Query Frame = 0

Query: 1   MLLLSPLPLSTRFPATHLSSPAVFLHH-NPHITTTHLSFSFISAAAAATSS--SVVTCYT 60
           MLLLSPLPLSTRFPAT L SP VFLHH NP ITT HLSF  ISAAAA+T+S  SVVTC T
Sbjct: 1   MLLLSPLPLSTRFPATQLPSPTVFLHHQNPPITT-HLSFPIISAAAASTTSFSSVVTCST 60

Query: 61  SSDNLEFDVFEDDPVSLQSRRYDFTPLLDFLSRSSAYPKSDSDTDSEVEFDFTLNSGSDS 120
           SSD LE DVFE+D VS QSRRYDFTPLLDFLSRS AYPKSDSD  SEVEFD  L+S S+S
Sbjct: 61  SSDALELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDSD--SEVEFDSVLDSDSES 120

Query: 121 DTASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSY 180
           D ASPTSLDPTEFQLAE YRAVPAPLWHSLLKSLC+SSSSIGLGYAVV WLQKHNLCFSY
Sbjct: 121 DKASPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFSY 180

Query: 181 ELLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQD 240
           ELLYSILIHALGRSEKLYEAFILSQ QTLTPLTYNALIGACARNND EKALNL+SRMRQD
Sbjct: 181 ELLYSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQD 240

Query: 241 GFQSDFVNYSLIIQSLTRTNKIDIPILQKLYEEIESDKIELDGLLLNDIILGFAKAGDPN 300
           G+QSDFVNYSLIIQSLTRTNKID+PILQKLYEEIESDKIELDG LLNDIILGFAKAGDPN
Sbjct: 241 GYQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPN 300

Query: 301 RALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALL 360
           RALYFLSMVQASGLNPKTSTFVA+ISALGN+GRTEEAEAIFEEMKEGGLKPRIKAFNALL
Sbjct: 301 RALYFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALL 360

Query: 361 KGYARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQ 420
           KGYA+KGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVG W+SAR LLKQMEARNVQ
Sbjct: 361 KGYAKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQ 420

Query: 421 PNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMET 480
           PNTFIFSRILASYRDRGEWQKTFEVLREMKN NVKPDRHFYNVMIDTFGKFNC+DHAMET
Sbjct: 421 PNTFIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMET 480

Query: 481 YDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGE 540
           Y+RMLSEGIEPDVVTWNTLIDCHRKHGYH+RAAELFEEMQERGY PCPTTYNIMINSLGE
Sbjct: 481 YERMLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGE 540

Query: 541 QEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATM 600
           QEKWDEVKILLGKMQSQGLLPNV+TYTTLVDIYG SGRFNDAI+CLEAMKSAGLKPS+TM
Sbjct: 541 QEKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTM 600

Query: 601 YNALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDMEAFSILQYMK 660
           YNALINAFAQ+GLSEQAVNAYRVM SDGL+PSLLALNSLINAFGEDRRD+EAF+ILQYMK
Sbjct: 601 YNALINAFAQKGLSEQAVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYMK 660

Query: 661 ENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYMKRTL 719
           ENDVKPDVVTYTTLMKALIRV+KFDKVPAVYEEMILSGCTPDGKARAMLRSAL+YMKRTL
Sbjct: 661 ENDVKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRSALKYMKRTL 719

BLAST of IVF0003927 vs. TAIR 10
Match: AT5G42310.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 978.8 bits (2529), Expect = 2.4e-285
Identity = 506/724 (69.89%), Postives = 597/724 (82.46%), Query Frame = 0

Query: 1   MLLLSPLPL-STRFPATHLSSPAVFLHHNPHITTTHLSFSFISAAAAA-----TSSSVVT 60
           MLLL   PL STRF + +  +     HH+ H        S  SA  +A     + SS  +
Sbjct: 1   MLLLQQPPLVSTRFHSLYFLTH----HHHHHHRFFQPPISAFSATTSASLPSPSPSSSSS 60

Query: 61  CYTSSDNLEFDVFEDDPVSLQ-SRRYDFTPLLDFLSRSSAYPKSDSDTDSEVEFDFTLNS 120
            ++S + L+ +  ED+  S +  RRYDF+PLL FLSR                 +  L+S
Sbjct: 61  YFSSWNGLDTNEEEDNEFSSEVHRRYDFSPLLKFLSRFG-------------PVELALDS 120

Query: 121 GSDSDTASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNL 180
            S+S+ ASP SL+P EF L E+YRAVPAP WHSL+KSL SS+SS+GL YAVVSWLQKHNL
Sbjct: 121 ESESE-ASPESLNPVEFDLVESYRAVPAPYWHSLIKSLTSSTSSLGLAYAVVSWLQKHNL 180

Query: 181 CFSYELLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSR 240
           CFSYELLYSILIHALGRSEKLYEAF+LSQKQTLTPLTYNALIGACARNND+EKALNL+++
Sbjct: 181 CFSYELLYSILIHALGRSEKLYEAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAK 240

Query: 241 MRQDGFQSDFVNYSLIIQSLTRTNKIDIPILQKLYEEIESDKIELDGLLLNDIILGFAKA 300
           MRQDG+QSDFVNYSL+IQSLTR+NKID  +L +LY+EIE DK+ELD  L+NDII+GFAK+
Sbjct: 241 MRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKS 300

Query: 301 GDPNRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAF 360
           GDP++AL  L M QA+GL+ KT+T V++ISAL + GRT EAEA+FEE+++ G+KPR +A+
Sbjct: 301 GDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAY 360

Query: 361 NALLKGYARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEA 420
           NALLKGY + G LK+AES+VSEMEK G+SPDEHTY LL+DAY N GRWESAR +LK+MEA
Sbjct: 361 NALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEA 420

Query: 421 RNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDH 480
            +VQPN+F+FSR+LA +RDRGEWQKTF+VL+EMK+  VKPDR FYNV+IDTFGKFNCLDH
Sbjct: 421 GDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDH 480

Query: 481 AMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMIN 540
           AM T+DRMLSEGIEPD VTWNTLIDCH KHG H  A E+FE M+ RG LPC TTYNIMIN
Sbjct: 481 AMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMIN 540

Query: 541 SLGEQEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKP 600
           S G+QE+WD++K LLGKM+SQG+LPNVVT+TTLVD+YG SGRFNDAI+CLE MKS GLKP
Sbjct: 541 SYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKP 600

Query: 601 SATMYNALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDMEAFSIL 660
           S+TMYNALINA+AQRGLSEQAVNA+RVM SDGL+PSLLALNSLINAFGEDRRD EAF++L
Sbjct: 601 SSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVL 660

Query: 661 QYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYM 718
           QYMKEN VKPDVVTYTTLMKALIRVDKF KVP VYEEMI+SGC PD KAR+MLRSALRYM
Sbjct: 661 QYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSALRYM 706

BLAST of IVF0003927 vs. TAIR 10
Match: AT1G62670.1 (rna processing factor 2 )

HSP 1 Score: 218.4 bits (555), Expect = 1.9e-56
Identity = 139/535 (25.98%), Postives = 260/535 (48.60%), Query Frame = 0

Query: 181 YSILIHALGRSEKLYEAFIL-SQKQTL----TPLTYNALIGACARNNDLEKALNLMSRMR 240
           +S L+ A+ +  K      L  Q Q L       TY+ LI    R + L  AL ++ +M 
Sbjct: 84  FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143

Query: 241 QDGFQSDFVNYSLIIQSLTRTNKIDIPILQKLYEEIESDKIELDGLLLNDIILGFAKAGD 300
           + G++ + V  S ++     + +I   +   L +++     + + +  N +I G      
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAV--ALVDQMFVTGYQPNTVTFNTLIHGLFLHNK 203

Query: 301 PNRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNA 360
            + A+  +  + A G  P   T+  V++ L   G T+ A  +  +M++G L+P +  +N 
Sbjct: 204 ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 263

Query: 361 LLKGYARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARN 420
           ++ G  +   + +A ++  EME  G+ P+  TY  L+    N GRW  A  LL  M  R 
Sbjct: 264 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 323

Query: 421 VQPNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAM 480
           + P+ F FS ++ ++   G+  +  ++  EM   ++ P    Y+ +I+ F   + LD A 
Sbjct: 324 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 383

Query: 481 ETYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSL 540
           + ++ M+S+   PDVVT+NTLI    K+   +   E+F EM +RG +    TYNI+I  L
Sbjct: 384 QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL 443

Query: 541 GEQEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSA 600
            +    D  + +  +M S G+ PN++TY TL+D    +G+   A+   E ++ + ++P+ 
Sbjct: 444 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 503

Query: 601 TMYNALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDMEAFSILQY 660
             YN +I    + G  E   + +  +   G++P ++A N++I+ F       EA ++ + 
Sbjct: 504 YTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE 563

Query: 661 MKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSAL 711
           MKE+   P+   Y TL++A +R    +    + +EM   G   D     ++ + L
Sbjct: 564 MKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 616

BLAST of IVF0003927 vs. TAIR 10
Match: AT2G31400.1 (genomes uncoupled 1 )

HSP 1 Score: 216.5 bits (550), Expect = 7.1e-56
Identity = 132/431 (30.63%), Postives = 216/431 (50.12%), Query Frame = 0

Query: 212 NALIGACARNNDLEKALNLMSRMRQDGFQSDFVNYSLIIQSLTRTNKIDIPILQKLYEEI 271
           +AL  A   + D E   +LM         SD   Y  II+ L   N+ D  +    +   
Sbjct: 167 DALQNAIDFSGDDEMFHSLMLSFESKLCGSDDCTY--IIRELGNRNECDKAVGFYEFAVK 226

Query: 272 ESDKIELDGLLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAVISALGNHGRT 331
              +    G L + +I    + G    A        A G       F A+ISA G  G  
Sbjct: 227 RERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLH 286

Query: 332 EEAEAIFEEMKEGGLKPRIKAFNALLKGYARKG-SLKEAESIVSEMEKSGLSPDEHTYGL 391
           EEA ++F  MKE GL+P +  +NA++    + G   K+      EM+++G+ PD  T+  
Sbjct: 287 EEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNS 346

Query: 392 LVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNSN 451
           L+   +  G WE+AR+L  +M  R ++ + F ++ +L +    G+    FE+L +M    
Sbjct: 347 LLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKR 406

Query: 452 VKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAA 511
           + P+   Y+ +ID F K    D A+  +  M   GI  D V++NTL+  + K G  + A 
Sbjct: 407 IMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEAL 466

Query: 512 ELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIY 571
           ++  EM   G      TYN ++   G+Q K+DEVK +  +M+ + +LPN++TY+TL+D Y
Sbjct: 467 DILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGY 526

Query: 572 GHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAFAQRGLSEQAVNAYRVMISDGLRPSL 631
              G + +A++     KSAGL+    +Y+ALI+A  + GL   AV+    M  +G+ P++
Sbjct: 527 SKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNV 586

Query: 632 LALNSLINAFG 642
           +  NS+I+AFG
Sbjct: 587 VTYNSIIDAFG 595

BLAST of IVF0003927 vs. TAIR 10
Match: AT5G65560.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 214.9 bits (546), Expect = 2.1e-55
Identity = 152/556 (27.34%), Postives = 263/556 (47.30%), Query Frame = 0

Query: 195 YEAFILSQKQTLTPLTYNALIG-----------ACARNNDLEKALNLMSRMRQD-----G 254
           Y+  + S    LT L  N  +G           +C    D    L+L  +M +D      
Sbjct: 119 YKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELK 178

Query: 255 FQSDFVNYSLIIQSLTRTNKIDIPILQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNR 314
           ++     Y+ ++ SL R   +D   ++++Y E+  DK+  +    N ++ G+ K G+   
Sbjct: 179 YKLIIGCYNTLLNSLARFGLVD--EMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEE 238

Query: 315 ALYFLSMVQASGLNPKTSTFVAVISALGN------------------------------H 374
           A  ++S +  +GL+P   T+ ++I                                   H
Sbjct: 239 ANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIH 298

Query: 375 G-----RTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAESIVSEMEKSGLSP 434
           G     R +EA  +F +MK+    P ++ +  L+K         EA ++V EME++G+ P
Sbjct: 299 GLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKP 358

Query: 435 DEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVL 494
           + HTY +L+D+  +  ++E AR LL QM  + + PN   ++ ++  Y  RG  +   +V+
Sbjct: 359 NIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV 418

Query: 495 REMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKH 554
             M++  + P+   YN +I  + K N +  AM   ++ML   + PDVVT+N+LID   + 
Sbjct: 419 ELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRS 478

Query: 555 GYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTY 614
           G  D A  L   M +RG +P   TY  MI+SL + ++ +E   L   ++ +G+ PNVV Y
Sbjct: 479 GNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMY 538

Query: 615 TTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAFAQRGLSEQAVNAYRVMIS 674
           T L+D Y  +G+ ++A   LE M S    P++  +NALI+     G  ++A      M+ 
Sbjct: 539 TALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVK 598

Query: 675 DGLRPSLLALNSLINAFGEDRRDMEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDK 700
            GL+P++     LI+   +D     A+S  Q M  +  KPD  TYTT ++   R  +   
Sbjct: 599 IGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLD 658

BLAST of IVF0003927 vs. TAIR 10
Match: AT3G22470.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 214.2 bits (544), Expect = 3.5e-55
Identity = 134/508 (26.38%), Postives = 241/508 (47.44%), Query Frame = 0

Query: 194 LYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDGFQSDFVNYSLIIQSL 253
           L+E+ I S +   TP+ +N L  A AR    +  L     M  +G + D    +++I   
Sbjct: 57  LFESMIQS-RPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCY 116

Query: 254 TRTNKI--DIPILQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNRALYFLSMVQASGL 313
            R  K+     +L + ++       E D +  + ++ GF   G  + A+  +  +     
Sbjct: 117 CRKKKLLFAFSVLGRAWKL----GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQ 176

Query: 314 NPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAES 373
            P   T   +I+ L   GR  EA  + + M E G +P    +  +L    + G+   A  
Sbjct: 177 RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALD 236

Query: 374 IVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYR 433
           +  +ME+  +      Y +++D+    G ++ A  L  +ME + ++ +   +S ++    
Sbjct: 237 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 296

Query: 434 DRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVV 493
           + G+W    ++LREM   N+ PD   ++ +ID F K   L  A E Y+ M++ GI PD +
Sbjct: 297 NDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTI 356

Query: 494 TWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKM 553
           T+N+LID   K      A ++F+ M  +G  P   TY+I+INS  + ++ D+   L  ++
Sbjct: 357 TYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI 416

Query: 554 QSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAFAQRGLS 613
            S+GL+PN +TY TLV  +  SG+ N A +  + M S G+ PS   Y  L++     G  
Sbjct: 417 SSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGEL 476

Query: 614 EQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDMEAFSILQYMKENDVKPDVVTYTTL 673
            +A+  +  M    +   +   N +I+      +  +A+S+   + +  VKPDVVTY  +
Sbjct: 477 NKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVM 536

Query: 674 MKALIRVDKFDKVPAVYEEMILSGCTPD 700
           +  L +     +   ++ +M   GCTPD
Sbjct: 537 IGGLCKKGSLSEADMLFRKMKEDGCTPD 559

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q8L8443.3e-28469.89Pentatricopeptide repeat-containing protein At5g42310, chloroplastic OS=Arabidop... [more]
A0A1D6IEG97.9e-19353.02Pentatricopeptide repeat-containing protein CRP1, chloroplastic OS=Zea mays OX=4... [more]
Q84ZD24.3e-19153.69Pentatricopeptide repeat-containing protein CRP1 homolog, chloroplastic OS=Oryza... [more]
B8Y6I08.8e-5926.01Pentatricopeptide repeat-containing protein 10, chloroplastic OS=Zea mays OX=457... [more]
Q76C991.1e-5626.36Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV... [more]
Match NameE-valueIdentityDescription
A0A5A7T6H70.0e+00100.00Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3CMJ20.0e+0099.86pentatricopeptide repeat-containing protein At5g42310, mitochondrial OS=Cucumis ... [more]
A0A0A0KCZ60.0e+0097.23Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G358090 PE=4 SV=1[more]
A0A6J1KKB70.0e+0091.68pentatricopeptide repeat-containing protein At5g42310, chloroplastic OS=Cucurbit... [more]
A0A6J1G3R40.0e+0091.54pentatricopeptide repeat-containing protein At5g42310, chloroplastic OS=Cucurbit... [more]
Match NameE-valueIdentityDescription
KAA0038458.10.0100.00pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa][more]
XP_008464858.10.099.86PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial ... [more]
XP_004144287.10.097.23pentatricopeptide repeat-containing protein At5g42310, chloroplastic [Cucumis sa... [more]
XP_038883964.10.095.28pentatricopeptide repeat-containing protein At5g42310, chloroplastic isoform X1 ... [more]
XP_023546092.10.091.97pentatricopeptide repeat-containing protein At5g42310, chloroplastic [Cucurbita ... [more]
Match NameE-valueIdentityDescription
AT5G42310.12.4e-28569.89Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT1G62670.11.9e-5625.98rna processing factor 2 [more]
AT2G31400.17.1e-5630.63genomes uncoupled 1 [more]
AT5G65560.12.1e-5527.34Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G22470.13.5e-5526.38Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 264..284
NoneNo IPR availablePANTHERPTHR47942TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 121..718
NoneNo IPR availablePANTHERPTHR47942:SF23PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN CRP1 HOMOLOG, CHLOROPLASTICcoord: 121..718
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 265..413
e-value: 2.2E-38
score: 134.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 429..551
e-value: 1.9E-35
score: 124.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 121..264
e-value: 1.3E-13
score: 52.8
coord: 620..694
e-value: 2.9E-15
score: 58.3
coord: 552..619
e-value: 4.7E-18
score: 67.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 307..584
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 547..607
e-value: 5.1E-11
score: 42.5
coord: 407..467
e-value: 1.3E-8
score: 34.7
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 488..535
e-value: 2.4E-14
score: 53.2
coord: 350..397
e-value: 1.8E-11
score: 44.1
coord: 631..676
e-value: 9.2E-11
score: 41.8
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 317..348
e-value: 2.0E-7
score: 28.8
coord: 386..420
e-value: 1.0E-6
score: 26.5
coord: 491..523
e-value: 1.1E-8
score: 32.7
coord: 634..665
e-value: 1.8E-4
score: 19.5
coord: 210..242
e-value: 1.7E-7
score: 29.0
coord: 352..385
e-value: 4.5E-8
score: 30.8
coord: 527..560
e-value: 3.8E-6
score: 24.7
coord: 666..699
e-value: 5.3E-8
score: 30.6
coord: 423..454
e-value: 0.0014
score: 16.6
coord: 597..629
e-value: 2.5E-5
score: 22.1
coord: 458..490
e-value: 1.5E-7
score: 29.1
coord: 561..594
e-value: 8.2E-8
score: 30.0
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 210..239
e-value: 1.6E-7
score: 31.1
coord: 317..345
e-value: 2.0E-6
score: 27.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 489..523
score: 13.482456
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 207..241
score: 11.750571
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 419..453
score: 10.073492
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 664..698
score: 11.575191
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 559..593
score: 12.189023
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 454..488
score: 11.32308
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 314..348
score: 12.167101
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 384..418
score: 12.254791
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 524..558
score: 10.533867
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 349..383
score: 12.167101
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 629..663
score: 9.284279
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 594..628
score: 11.027125

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0003927.2IVF0003927.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010239 chloroplast mRNA processing
biological_process GO:0009658 chloroplast organization
cellular_component GO:0042644 chloroplast nucleoid
cellular_component GO:0042651 thylakoid membrane
molecular_function GO:0003729 mRNA binding
molecular_function GO:0005515 protein binding
molecular_function GO:0003727 single-stranded RNA binding