IVF0003895 (gene) Melon (IVF77) v1

Overview


Name	IVF0003895
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	thioredoxin H-type
Location	chr10: 2668245 .. 2669029 (+)
RNA-Seq Expression	IVF0003895
Synteny	IVF0003895

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGATACACGAAACAAGACTTCAAACAGGGATCTGAGCTCAAAATTCAAATCTTTCGGCTTCAATTTCAAAAGATGGGAGCAAGCTTTACGGTCCCAGGTTCAAAATCTTCTAATGCAATGATACAACCAAAGCCTCCAACCATTATAGAGTGTCACGACAAAGCTCAATGGACAGCTCGTTTTGAAGCTACAAAGGAAACAAACAAGCTTGTAAGTAATTTCATAACATACAATAATGTATGTGTTTTTGTTTTTGTTTTTTTGTTGTGGACAAGCACTAGCAGCTGGGTTGGTTTAACTTTGTTGTTGTGGTTTGTTATGGTATAGATGGTGATTGACTTTGCTGCTGCATGGTGTGGACCTTGTCGACACATGGAGCCGATTATCAAGGAGTTTGCAGCAAGGTTCAAGGATGTTGAGTTCGTTAAAATCGATGTCGATGAATTGATGGTATGAGCTTTCAAACTTGTCTTGTTTTGTTTTGATTCAGTACATGACATGACCTGTTGAGAAAAATGGATGACAATACAGGACATCGCATACGAATATGGGGTGGAGGCAATGCCAACATTCATACTGATTAAGAATGGGAAAGTAATCGATAAGGTGGTCGGAGACAGGAGGGAGGAGCTGCAGAAGAAGATTGAGAAACATAGTAAATATTGATTGATGCTAATGAAGCTCCTCGATAAGGAAGGAAGAAAAAAGTAAAATAAAGAACCATGAATCTAGCTGTCTAGAACAAACTAAAATGGTTTTTGCTGTTTATTTATTAGCCCAGCC

mRNA sequence

CTTGATACACGAAACAAGACTTCAAACAGGGATCTGAGCTCAAAATTCAAATCTTTCGGCTTCAATTTCAAAAGATGGGAGCAAGCTTTACGGTCCCAGGTTCAAAATCTTCTAATGCAATGATACAACCAAAGCCTCCAACCATTATAGAGTGTCACGACAAAGCTCAATGGACAGCTCGTTTTGAAGCTACAAAGGAAACAAACAAGCTTATGGTGATTGACTTTGCTGCTGCATGGTGTGGACCTTGTCGACACATGGAGCCGATTATCAAGGAGTTTGCAGCAAGGTTCAAGGATGTTGAGTTCGTTAAAATCGATGTCGATGAATTGATGGACATCGCATACGAATATGGGGTGGAGGCAATGCCAACATTCATACTGATTAAGAATGGGAAAGTAATCGATAAGGTGGTCGGAGACAGGAGGGAGGAGCTGCAGAAGAAGATTGAGAAACATAGTAAATATTGATTGATGCTAATGAAGCTCCTCGATAAGGAAGGAAGAAAAAAGTAAAATAAAGAACCATGAATCTAGCTGTCTAGAACAAACTAAAATGGTTTTTGCTGTTTATTTATTAGCCCAGCC

Coding sequence (CDS)

ATGGGAGCAAGCTTTACGGTCCCAGGTTCAAAATCTTCTAATGCAATGATACAACCAAAGCCTCCAACCATTATAGAGTGTCACGACAAAGCTCAATGGACAGCTCGTTTTGAAGCTACAAAGGAAACAAACAAGCTTATGGTGATTGACTTTGCTGCTGCATGGTGTGGACCTTGTCGACACATGGAGCCGATTATCAAGGAGTTTGCAGCAAGGTTCAAGGATGTTGAGTTCGTTAAAATCGATGTCGATGAATTGATGGACATCGCATACGAATATGGGGTGGAGGCAATGCCAACATTCATACTGATTAAGAATGGGAAAGTAATCGATAAGGTGGTCGGAGACAGGAGGGAGGAGCTGCAGAAGAAGATTGAGAAACATAGTAAATATTGA

Protein sequence

MGASFTVPGSKSSNAMIQPKPPTIIECHDKAQWTARFEATKETNKLMVIDFAAAWCGPCRHMEPIIKEFAARFKDVEFVKIDVDELMDIAYEYGVEAMPTFILIKNGKVIDKVVGDRREELQKKIEKHSKY

Homology

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BLAST of IVF0003895 vs. ExPASy Swiss-Prot
Match: Q38879 (Thioredoxin H2 OS=Arabidopsis thaliana OX=3702 GN=TRX2 PE=1 SV=2)

HSP 1 Score: 133.7 bits (335), Expect = 1.6e-30
Identity = 61/128 (47.66%), Postives = 91/128 (71.09%), Query Frame = 0


Query: 2   GASFTVPGS--KSSNAMIQPKPPTIIECHDKAQWTARFEATKETNKLMVIDFAAAWCGPC 61
           GA  TV GS   ++ A  + +P  +++    A+W   F   KE+NKL+V+DF+A+WCGPC
Sbjct: 3   GALSTVFGSGEDATAAGTESEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCGPC 62

Query: 62  RHMEPIIKEFAARFKDVEFVKIDVDELMDIAYEYGVEAMPTFILIKNGKVIDKVVGDRRE 121
           R +EP I   A +F DV+FVK+DVDEL D+A E+ V AMPTF+L+K GK I++++G +++
Sbjct: 63  RMIEPAIHAMADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKD 122

Query: 122 ELQKKIEK 128
           EL+KK+ K
Sbjct: 123 ELEKKVSK 130

[Close]

BLAST of IVF0003895 vs. ExPASy Swiss-Prot
Match: Q39239 (Thioredoxin H4 OS=Arabidopsis thaliana OX=3702 GN=TRX4 PE=1 SV=2)

HSP 1 Score: 123.6 bits (309), Expect = 1.6e-27
Identity = 56/107 (52.34%), Postives = 75/107 (70.09%), Query Frame = 0


Query: 24  IIECHDKAQWTARFEATKETNKLMVIDFAAAWCGPCRHMEPIIKEFAARF-KDVEFVKID 83
           +I CH    WT + +  KE+NKL+VIDF A+WC PCR + PI  + A +F     F K+D
Sbjct: 8   VIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFKVD 67

Query: 84  VDELMDIAYEYGVEAMPTFILIKNGKVIDKVVGDRREELQKKIEKHS 130
           VDEL  +A E+GVEAMPTF+ IK G+V+DK+VG  +E+LQ KI KH+
Sbjct: 68  VDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKHT 114

[Close]

BLAST of IVF0003895 vs. ExPASy Swiss-Prot
Match: Q6Z4I3 (Thioredoxin H2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0190800 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.8e-27
Identity = 57/125 (45.60%), Postives = 85/125 (68.00%), Query Frame = 0


Query: 1   MGASFTVPGSKSSNAMIQPKPPTIIECHDKAQWTARFEATKETNKLMVIDFAAAWCGPCR 60
           MG +F+    K + A  +     ++  H KA+W   ++A K T KL+VIDF+A+WCGPC+
Sbjct: 1   MGGAFSTSKPKPA-AGEEGGESAVVAVHSKAKWDELWDAHKNTTKLVVIDFSASWCGPCK 60

Query: 61  HMEPIIKEFAARFKDVEFVKIDVDELMDIAYEYGVEAMPTFILIKNGKVIDKVVGDRREE 120
            MEP+ KE A RF DV F+K+DVDEL ++A  + VEAMPTF+L + G+ + ++VG  ++E
Sbjct: 61  MMEPVFKEMAGRFTDVAFLKVDVDELAEVARTWRVEAMPTFVLARGGEEVGRIVGADKDE 120

Query: 121 LQKKI 126
           L+K I
Sbjct: 121 LEKTI 124

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BLAST of IVF0003895 vs. ExPASy Swiss-Prot
Match: Q39362 (Thioredoxin H-type 2 OS=Brassica napus OX=3708 GN=THL-2 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 3.6e-27
Identity = 54/107 (50.47%), Postives = 76/107 (71.03%), Query Frame = 0


Query: 24  IIECHDKAQWTARFEATKETNKLMVIDFAAAWCGPCRHMEPIIKEFAARF-KDVEFVKID 83
           +I CH+   W  + +  K++NKL+VIDF A+WC PCR + P+  + A +F     F K+D
Sbjct: 8   VIGCHEIDVWAVQLDTAKQSNKLIVIDFTASWCPPCRMIAPVFADLAKKFMSSAIFFKVD 67

Query: 84  VDELMDIAYEYGVEAMPTFILIKNGKVIDKVVGDRREELQKKIEKHS 130
           VDEL ++A E+GVEAMPTF+LIK+G V+DKVVG R+E+L   I KH+
Sbjct: 68  VDELQNVAQEFGVEAMPTFVLIKDGNVVDKVVGARKEDLHATIAKHT 114

[Close]

BLAST of IVF0003895 vs. ExPASy Swiss-Prot
Match: Q96419 (Thioredoxin H-type OS=Fagopyrum esculentum OX=3617 PE=3 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 3.6e-27
Identity = 50/106 (47.17%), Postives = 76/106 (71.70%), Query Frame = 0


Query: 24  IIECHDKAQWTARFEATKETNKLMVIDFAAAWCGPCRHMEPIIKEFAARFKDVEFVKIDV 83
           +I CH   +W  +F+  K++ KL+VIDF A+WCGPCR + P + E A +F  V F K+DV
Sbjct: 7   VIACHTVQEWNEKFQKAKDSGKLIVIDFTASWCGPCRVITPYVSELAKKFPHVAFFKVDV 66

Query: 84  DELMDIAYEYGVEAMPTFILIKNGKVIDKVVGDRREELQKKIEKHS 130
           D+L D+A EY VEAMP+F+++K G+ ++++VG R++EL  KI  H+
Sbjct: 67  DDLKDVAEEYKVEAMPSFVILKEGQEVERIVGARKDELLHKIAVHA 112

[Close]

BLAST of IVF0003895 vs. ExPASy TrEMBL
Match: A0A5A7SWX8 (Thioredoxin H-type OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00350 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 4.0e-69
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MGASFTVPGSKSSNAMIQPKPPTIIECHDKAQWTARFEATKETNKLMVIDFAAAWCGPCR 60
           MGASFTVPGSKSSNAMIQPKPPTIIECHDKAQWTARFEATKETNKLMVIDFAAAWCGPCR
Sbjct: 1   MGASFTVPGSKSSNAMIQPKPPTIIECHDKAQWTARFEATKETNKLMVIDFAAAWCGPCR 60

Query: 61  HMEPIIKEFAARFKDVEFVKIDVDELMDIAYEYGVEAMPTFILIKNGKVIDKVVGDRREE 120
           HMEPIIKEFAARFKDVEFVKIDVDELMDIAYEYGVEAMPTFILIKNGKVIDKVVGDRREE
Sbjct: 61  HMEPIIKEFAARFKDVEFVKIDVDELMDIAYEYGVEAMPTFILIKNGKVIDKVVGDRREE 120

Query: 121 LQKKIEKHSKY 132
           LQKKIEKHSKY
Sbjct: 121 LQKKIEKHSKY 131

[Close]

BLAST of IVF0003895 vs. ExPASy TrEMBL
Match: A0A1S3BE83 (thioredoxin H-type OS=Cucumis melo OX=3656 GN=LOC103489073 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 4.0e-69
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MGASFTVPGSKSSNAMIQPKPPTIIECHDKAQWTARFEATKETNKLMVIDFAAAWCGPCR 60
           MGASFTVPGSKSSNAMIQPKPPTIIECHDKAQWTARFEATKETNKLMVIDFAAAWCGPCR
Sbjct: 1   MGASFTVPGSKSSNAMIQPKPPTIIECHDKAQWTARFEATKETNKLMVIDFAAAWCGPCR 60

Query: 61  HMEPIIKEFAARFKDVEFVKIDVDELMDIAYEYGVEAMPTFILIKNGKVIDKVVGDRREE 120
           HMEPIIKEFAARFKDVEFVKIDVDELMDIAYEYGVEAMPTFILIKNGKVIDKVVGDRREE
Sbjct: 61  HMEPIIKEFAARFKDVEFVKIDVDELMDIAYEYGVEAMPTFILIKNGKVIDKVVGDRREE 120

Query: 121 LQKKIEKHSKY 132
           LQKKIEKHSKY
Sbjct: 121 LQKKIEKHSKY 131

[Close]

BLAST of IVF0003895 vs. ExPASy TrEMBL
Match: A0A0A0KQG0 (Thioredoxin h OS=Cucumis sativus OX=3659 GN=Csa_5G604150 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 9.4e-63
Identity = 121/131 (92.37%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 1   MGASFTVPGSKSSNAMIQPKPPTIIECHDKAQWTARFEATKETNKLMVIDFAAAWCGPCR 60
           MGASFTVP SKSSNAMIQ KPPTIIECHDKAQWTARFEATKETNKLMVIDF AAWCGPCR
Sbjct: 1   MGASFTVPRSKSSNAMIQQKPPTIIECHDKAQWTARFEATKETNKLMVIDFTAAWCGPCR 60

Query: 61  HMEPIIKEFAARFKDVEFVKIDVDELMDIAYEYGVEAMPTFILIKNGKVIDKVVGDRREE 120
           HMEP IKE AARFKDVEFVKIDVDELMD+A EYGVEAMPTFILIKNGKVIDKVVG RR++
Sbjct: 61  HMEPTIKELAARFKDVEFVKIDVDELMDVAKEYGVEAMPTFILIKNGKVIDKVVGARRDD 120

Query: 121 LQKKIEKHSKY 132
           LQKKIEKHSKY
Sbjct: 121 LQKKIEKHSKY 131

[Close]

BLAST of IVF0003895 vs. ExPASy TrEMBL
Match: A0A6J1DAH1 (thioredoxin H4-like OS=Momordica charantia OX=3673 GN=LOC111019163 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.7e-57
Identity = 111/131 (84.73%), Postives = 118/131 (90.08%), Query Frame = 0


Query: 1   MGASFTVPGSKSSNAMIQPKPPTIIECHDKAQWTARFEATKETNKLMVIDFAAAWCGPCR 60
           MGASFTVP SKSSNA +Q K PTI+ECH K QWTARFEA+KETNKL+VIDF A WCGPCR
Sbjct: 22  MGASFTVPRSKSSNATLQAKAPTIVECHTKPQWTARFEASKETNKLLVIDFTATWCGPCR 81

Query: 61  HMEPIIKEFAARFKDVEFVKIDVDELMDIAYEYGVEAMPTFILIKNGKVIDKVVGDRREE 120
           HMEP IKEFAARF DVEFVKIDVDEL D+A EYGVEAMPTFILIKNGKVIDKVVG R+E+
Sbjct: 82  HMEPTIKEFAARFVDVEFVKIDVDELTDVAREYGVEAMPTFILIKNGKVIDKVVGARKED 141

Query: 121 LQKKIEKHSKY 132
           LQKKIEKHSKY
Sbjct: 142 LQKKIEKHSKY 152

[Close]

BLAST of IVF0003895 vs. ExPASy TrEMBL
Match: A0A6J1F7B2 (thioredoxin H4-like OS=Cucurbita moschata OX=3662 GN=LOC111442762 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 7.2e-55
Identity = 104/131 (79.39%), Postives = 117/131 (89.31%), Query Frame = 0


Query: 1   MGASFTVPGSKSSNAMIQPKPPTIIECHDKAQWTARFEATKETNKLMVIDFAAAWCGPCR 60
           MGASFT+P SKSSNA +Q   PTI+ECH+KA+WTAR EAT+ETNKLMVIDF AAWCGPCR
Sbjct: 1   MGASFTIPRSKSSNATLQAMTPTIVECHNKAEWTARLEATRETNKLMVIDFTAAWCGPCR 60

Query: 61  HMEPIIKEFAARFKDVEFVKIDVDELMDIAYEYGVEAMPTFILIKNGKVIDKVVGDRREE 120
            MEP IKEFA+RFKDVEFVKIDVDELMD+A EYGV+AMPTFILIK GKV+DKVVG R+++
Sbjct: 61  QMEPTIKEFASRFKDVEFVKIDVDELMDVAKEYGVDAMPTFILIKKGKVVDKVVGARKDD 120

Query: 121 LQKKIEKHSKY 132
           LQKKIE H KY
Sbjct: 121 LQKKIENHGKY 131

[Close]

BLAST of IVF0003895 vs. NCBI nr
Match: XP_008446296.1 (PREDICTED: thioredoxin H-type [Cucumis melo] >KAA0034376.1 thioredoxin H-type [Cucumis melo var. makuwa] >TYK15543.1 thioredoxin H-type [Cucumis melo var. makuwa])

HSP 1 Score: 270 bits (689), Expect = 3.47e-91
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MGASFTVPGSKSSNAMIQPKPPTIIECHDKAQWTARFEATKETNKLMVIDFAAAWCGPCR 60
           MGASFTVPGSKSSNAMIQPKPPTIIECHDKAQWTARFEATKETNKLMVIDFAAAWCGPCR
Sbjct: 1   MGASFTVPGSKSSNAMIQPKPPTIIECHDKAQWTARFEATKETNKLMVIDFAAAWCGPCR 60

Query: 61  HMEPIIKEFAARFKDVEFVKIDVDELMDIAYEYGVEAMPTFILIKNGKVIDKVVGDRREE 120
           HMEPIIKEFAARFKDVEFVKIDVDELMDIAYEYGVEAMPTFILIKNGKVIDKVVGDRREE
Sbjct: 61  HMEPIIKEFAARFKDVEFVKIDVDELMDIAYEYGVEAMPTFILIKNGKVIDKVVGDRREE 120

Query: 121 LQKKIEKHSKY 131
           LQKKIEKHSKY
Sbjct: 121 LQKKIEKHSKY 131

[Close]

BLAST of IVF0003895 vs. NCBI nr
Match: XP_004135204.1 (thioredoxin H-type [Cucumis sativus] >KGN51870.1 hypothetical protein Csa_007853 [Cucumis sativus])

HSP 1 Score: 248 bits (634), Expect = 8.52e-83
Identity = 121/131 (92.37%), Postives = 124/131 (94.66%), Query Frame = 0


Query: 1   MGASFTVPGSKSSNAMIQPKPPTIIECHDKAQWTARFEATKETNKLMVIDFAAAWCGPCR 60
           MGASFTVP SKSSNAMIQ KPPTIIECHDKAQWTARFEATKETNKLMVIDF AAWCGPCR
Sbjct: 1   MGASFTVPRSKSSNAMIQQKPPTIIECHDKAQWTARFEATKETNKLMVIDFTAAWCGPCR 60

Query: 61  HMEPIIKEFAARFKDVEFVKIDVDELMDIAYEYGVEAMPTFILIKNGKVIDKVVGDRREE 120
           HMEP IKE AARFKDVEFVKIDVDELMD+A EYGVEAMPTFILIKNGKVIDKVVG RR++
Sbjct: 61  HMEPTIKELAARFKDVEFVKIDVDELMDVAKEYGVEAMPTFILIKNGKVIDKVVGARRDD 120

Query: 121 LQKKIEKHSKY 131
           LQKKIEKHSKY
Sbjct: 121 LQKKIEKHSKY 131

[Close]

BLAST of IVF0003895 vs. NCBI nr
Match: XP_038892719.1 (thioredoxin H4-like [Benincasa hispida])

HSP 1 Score: 241 bits (614), Expect = 9.56e-80
Identity = 116/131 (88.55%), Postives = 123/131 (93.89%), Query Frame = 0


Query: 1   MGASFTVPGSKSSNAMIQPKPPTIIECHDKAQWTARFEATKETNKLMVIDFAAAWCGPCR 60
           MGASFTVP SKSSNA +QPK P I+EC +KAQWTARFEATKETNKLMVIDF AAWCGPCR
Sbjct: 1   MGASFTVPRSKSSNATLQPKTPIIVECRNKAQWTARFEATKETNKLMVIDFTAAWCGPCR 60

Query: 61  HMEPIIKEFAARFKDVEFVKIDVDELMDIAYEYGVEAMPTFILIKNGKVIDKVVGDRREE 120
           HMEPIIKEFAARFKDVEFVKIDVDELMD+A EYGVEAMPTFILIKNGKV+DKVVG RRE+
Sbjct: 61  HMEPIIKEFAARFKDVEFVKIDVDELMDVAQEYGVEAMPTFILIKNGKVVDKVVGARRED 120

Query: 121 LQKKIEKHSKY 131
           LQKKIEK+SKY
Sbjct: 121 LQKKIEKYSKY 131

[Close]

BLAST of IVF0003895 vs. NCBI nr
Match: XP_022151175.1 (thioredoxin H4-like [Momordica charantia])

HSP 1 Score: 230 bits (587), Expect = 2.52e-75
Identity = 111/131 (84.73%), Postives = 118/131 (90.08%), Query Frame = 0


Query: 1   MGASFTVPGSKSSNAMIQPKPPTIIECHDKAQWTARFEATKETNKLMVIDFAAAWCGPCR 60
           MGASFTVP SKSSNA +Q K PTI+ECH K QWTARFEA+KETNKL+VIDF A WCGPCR
Sbjct: 22  MGASFTVPRSKSSNATLQAKAPTIVECHTKPQWTARFEASKETNKLLVIDFTATWCGPCR 81

Query: 61  HMEPIIKEFAARFKDVEFVKIDVDELMDIAYEYGVEAMPTFILIKNGKVIDKVVGDRREE 120
           HMEP IKEFAARF DVEFVKIDVDEL D+A EYGVEAMPTFILIKNGKVIDKVVG R+E+
Sbjct: 82  HMEPTIKEFAARFVDVEFVKIDVDELTDVAREYGVEAMPTFILIKNGKVIDKVVGARKED 141

Query: 121 LQKKIEKHSKY 131
           LQKKIEKHSKY
Sbjct: 142 LQKKIEKHSKY 152

[Close]

BLAST of IVF0003895 vs. NCBI nr
Match: XP_023541691.1 (thioredoxin H4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 223 bits (567), Expect = 1.40e-72
Identity = 104/131 (79.39%), Postives = 119/131 (90.84%), Query Frame = 0


Query: 1   MGASFTVPGSKSSNAMIQPKPPTIIECHDKAQWTARFEATKETNKLMVIDFAAAWCGPCR 60
           MGASFTVP S+SS+  ++ K PTI+ECH+KA+WTA +EATKETNKLMVIDF AAWC PCR
Sbjct: 1   MGASFTVPRSRSSSTSLKGKAPTIVECHNKAEWTAHYEATKETNKLMVIDFTAAWCAPCR 60

Query: 61  HMEPIIKEFAARFKDVEFVKIDVDELMDIAYEYGVEAMPTFILIKNGKVIDKVVGDRREE 120
           HMEP IKEFAARFKDVEF+KIDVD+L D+A EYGVEAMPTFIL+KNGKV+DKVVG RRE+
Sbjct: 61  HMEPTIKEFAARFKDVEFIKIDVDKLADVAKEYGVEAMPTFILLKNGKVVDKVVGARRED 120

Query: 121 LQKKIEKHSKY 131
           LQKKIEK+SKY
Sbjct: 121 LQKKIEKYSKY 131

[Close]

BLAST of IVF0003895 vs. TAIR 10
Match: AT5G39950.1 (thioredoxin 2 )

HSP 1 Score: 133.7 bits (335), Expect = 1.1e-31
Identity = 61/128 (47.66%), Postives = 91/128 (71.09%), Query Frame = 0


Query: 2   GASFTVPGS--KSSNAMIQPKPPTIIECHDKAQWTARFEATKETNKLMVIDFAAAWCGPC 61
           GA  TV GS   ++ A  + +P  +++    A+W   F   KE+NKL+V+DF+A+WCGPC
Sbjct: 3   GALSTVFGSGEDATAAGTESEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCGPC 62

Query: 62  RHMEPIIKEFAARFKDVEFVKIDVDELMDIAYEYGVEAMPTFILIKNGKVIDKVVGDRRE 121
           R +EP I   A +F DV+FVK+DVDEL D+A E+ V AMPTF+L+K GK I++++G +++
Sbjct: 63  RMIEPAIHAMADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKD 122

Query: 122 ELQKKIEK 128
           EL+KK+ K
Sbjct: 123 ELEKKVSK 130

[Close]

BLAST of IVF0003895 vs. TAIR 10
Match: AT1G19730.1 (Thioredoxin superfamily protein )

HSP 1 Score: 123.6 bits (309), Expect = 1.1e-28
Identity = 56/107 (52.34%), Postives = 75/107 (70.09%), Query Frame = 0


Query: 24  IIECHDKAQWTARFEATKETNKLMVIDFAAAWCGPCRHMEPIIKEFAARF-KDVEFVKID 83
           +I CH    WT + +  KE+NKL+VIDF A+WC PCR + PI  + A +F     F K+D
Sbjct: 8   VIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFKVD 67

Query: 84  VDELMDIAYEYGVEAMPTFILIKNGKVIDKVVGDRREELQKKIEKHS 130
           VDEL  +A E+GVEAMPTF+ IK G+V+DK+VG  +E+LQ KI KH+
Sbjct: 68  VDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKHT 114

[Close]

BLAST of IVF0003895 vs. TAIR 10
Match: AT1G69880.1 (thioredoxin H-type 8 )

HSP 1 Score: 119.0 bits (297), Expect = 2.8e-27
Identity = 50/109 (45.87%), Postives = 78/109 (71.56%), Query Frame = 0


Query: 22  PTIIECHDKAQWTARFEATKETNKLMVIDFAAAWCGPCRHMEPIIKEFAARFKDVEFVKI 81
           P I+E  +  QW +R  A K+TNKL+VI+F A WCGPC+ +EP ++E AA++ DVEFVKI
Sbjct: 37  PCIVEIKNMNQWKSRLNALKDTNKLLVIEFTAKWCGPCKTLEPKLEELAAKYTDVEFVKI 96

Query: 82  DVDELMDIAYEYGVEAMPTFILIKNGKVIDKVVGDRREELQKKIEKHSK 131
           DVD LM +  E+ +  +P  + +K G+ +D VVG + +EL++K+ K+++
Sbjct: 97  DVDVLMSVWMEFNLSTLPAIVFMKRGREVDMVVGVKVDELERKLNKYTQ 145

[Close]

BLAST of IVF0003895 vs. TAIR 10
Match: AT1G59730.1 (thioredoxin H-type 7 )

HSP 1 Score: 117.9 bits (294), Expect = 6.3e-27
Identity = 48/105 (45.71%), Postives = 74/105 (70.48%), Query Frame = 0


Query: 24  IIECHDKAQWTARFEATKETNKLMVIDFAAAWCGPCRHMEPIIKEFAARFKDVEFVKIDV 83
           ++E   + QW + F++ K +NKL+VIDF A WCGPC+ MEP ++E A+++ +  F ++DV
Sbjct: 23  VVEIESRRQWKSLFDSMKGSNKLLVIDFTAVWCGPCKAMEPRVREIASKYSEAVFARVDV 82

Query: 84  DELMDIAYEYGVEAMPTFILIKNGKVIDKVVGDRREELQKKIEKH 129
           D LMD+A  Y    +P F+ +K G+ ID+VVG + +EL KKIE+H
Sbjct: 83  DRLMDVAGTYRAITLPAFVFVKRGEEIDRVVGAKPDELVKKIEQH 127

[Close]

BLAST of IVF0003895 vs. TAIR 10
Match: AT1G45145.1 (thioredoxin H-type 5 )

HSP 1 Score: 116.3 bits (290), Expect = 1.8e-26
Identity = 50/105 (47.62%), Postives = 71/105 (67.62%), Query Frame = 0


Query: 24  IIECHDKAQWTARFEATKETNKLMVIDFAAAWCGPCRHMEPIIKEFAARFKDVEFVKIDV 83
           +I CH    W  + +   E+ KL+VIDF A+WC PCR + P+  E A +F +V F KIDV
Sbjct: 7   VIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVFFKIDV 66

Query: 84  DELMDIAYEYGVEAMPTFILIKNGKVIDKVVGDRREELQKKIEKH 129
           DEL  +A E+ VEAMPTF+ +K G +ID+VVG  ++E+ +K+ KH
Sbjct: 67  DELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKH 111

The following BLAST results are available for this feature:

BLAST of IVF0003895 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38879	1.6e-30	47.66	Thioredoxin H2 OS=Arabidopsis thaliana OX=3702 GN=TRX2 PE=1 SV=2	[more]
Q39239	1.6e-27	52.34	Thioredoxin H4 OS=Arabidopsis thaliana OX=3702 GN=TRX4 PE=1 SV=2	[more]
Q6Z4I3	2.8e-27	45.60	Thioredoxin H2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0190800 PE=2 S...	[more]
Q39362	3.6e-27	50.47	Thioredoxin H-type 2 OS=Brassica napus OX=3708 GN=THL-2 PE=2 SV=1	[more]
Q96419	3.6e-27	47.17	Thioredoxin H-type OS=Fagopyrum esculentum OX=3617 PE=3 SV=1	[more]

BLAST of IVF0003895 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SWX8	4.0e-69	100.00	Thioredoxin H-type OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00...	[more]
A0A1S3BE83	4.0e-69	100.00	thioredoxin H-type OS=Cucumis melo OX=3656 GN=LOC103489073 PE=4 SV=1	[more]
A0A0A0KQG0	9.4e-63	92.37	Thioredoxin h OS=Cucumis sativus OX=3659 GN=Csa_5G604150 PE=4 SV=1	[more]
A0A6J1DAH1	2.7e-57	84.73	thioredoxin H4-like OS=Momordica charantia OX=3673 GN=LOC111019163 PE=4 SV=1	[more]
A0A6J1F7B2	7.2e-55	79.39	thioredoxin H4-like OS=Cucurbita moschata OX=3662 GN=LOC111442762 PE=4 SV=1	[more]

BLAST of IVF0003895 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446296.1	3.47e-91	100.00	PREDICTED: thioredoxin H-type [Cucumis melo] >KAA0034376.1 thioredoxin H-type [C...	[more]
XP_004135204.1	8.52e-83	92.37	thioredoxin H-type [Cucumis sativus] >KGN51870.1 hypothetical protein Csa_007853...	[more]
XP_038892719.1	9.56e-80	88.55	thioredoxin H4-like [Benincasa hispida]	[more]
XP_022151175.1	2.52e-75	84.73	thioredoxin H4-like [Momordica charantia]	[more]
XP_023541691.1	1.40e-72	79.39	thioredoxin H4-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of IVF0003895 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G39950.1	1.1e-31	47.66	thioredoxin 2	[more]
AT1G19730.1	1.1e-28	52.34	Thioredoxin superfamily protein	[more]
AT1G69880.1	2.8e-27	45.87	thioredoxin H-type 8	[more]
AT1G59730.1	6.3e-27	45.71	thioredoxin H-type 7	[more]
AT1G45145.1	1.8e-26	47.62	thioredoxin H-type 5	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 94..105 score: 39.12 coord: 47..55 score: 42.53 coord: 55..64 score: 57.78
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 9..130 e-value: 2.7E-38 score: 132.7
None	No IPR available	PANTHER	PTHR10438:SF416	THIOREDOXIN H7	coord: 18..129
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 18..129
None	No IPR available	CDD	cd02947	TRX_family	coord: 37..126 e-value: 3.90364E-37 score: 119.97
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 37..126 e-value: 9.0E-28 score: 96.3
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 6..130 score: 14.341769
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 16..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0003895.1	IVF0003895.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006662	glycerol ether metabolic process
molecular_function	GO:0015035	protein-disulfide reductase activity