IVF0003857 (gene) Melon (IVF77) v1

Overview


Name	IVF0003857
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Ras-related protein Rab-6A
Location	chr04: 480443 .. 485953 (+)
RNA-Seq Expression	IVF0003857
Synteny	IVF0003857

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAATGAAGGGTGAGAACGAACCGAGAAATTGGATCCGACCCGTTTGTAAAGAAATTTAGATCCTTGAGGAGTTAGTGCGAAACTGAAAGCAAATCAACACAAAGAACAAACCAAAATCCAGAGTTTCTTCCATTTGCAACTCATTTCATTTCATTCCCAAACCTTCTTCTCCATCCCTTAATTCTTCCTCTCTCGGAATTTTCAATCACAGATCTCCCCGGAAATGGCTCCCACCTCAGCTCTGGCGAAGTATAAGCTCGTCTTTCTCGGTGACCAGTCTGTTGGCAAAACCAGCATCATTACACGCTTCATGTACGACAAATTCGATAATACATATCAGGTAATTCCTTGCTCAATCCTTAAATGAGTAGATCCTTCGTTTCTATCACACTGCGCGCTCGGATCGGTTTCCAAACTGTTAATCAATGCCTGATCCTGTTGTTTCATCTTTAATTTTGATTCCTCTTGTAGTTTTCTACGATTCTATGTAGCTTTCTTTTCTGCTGTGTGTTGGATTGTGTCATTGAGGAGGATAAGAACTCCGTGTTTACGTTTTTAGATCTTTTGGTTTTTGTTCTTAGGCGATCAGCATTTTCTTTACACACTGTAACTGTTTCAATATATTGGTTTTTAGTCAAGAGTTCAGTAATTAAGCAGAGTCTTAAGTCTATGATTCTGACCTTGCTGCTTCCAGGTGGATGATGTCAAATTTTAGCGTTGTTTCTTGTCGACAACATTAGTCTGTGGTACTAGTTTATCGAGTACGTTTTGCAGAATTGTTTCCTCTATGTTACTTTGTTGGATTATTTGAAGAATAGTTCGTTGACTTTGTACTATAAACAACCACTATTTTAGTCCTTACCTCATGGAGTTGGTGAGTATTGCTAATTATCCAACTTTCGACTTGATAGTGCAATTATATGCTCGTCCCATATCATGTATGTAAAAAATGCTTCGACTATCTCTCTTTGACACATTGGCAAAGATTCATAATCACTTTTATGTTCAATTTGGTAATGCTGTTCCATGTCATGTATGTAAAAAATGCTTCGACTATCTCTCTCCGACACATTGGCAAAGATTCTTAATCATTTTTATGTTCAATTTGGTAATTCTAATTGCACCAAGCTGTAACAAGTATGATTCACGAAATCGGATGTATCTTGGTTATTGTAACTGCATTGACGGCACGACATGTTAAGTTCCATATGGTCTTGGACTCTTGGGACATTTTTGTCCCAGCTACTATGGAGAACAGGATTTGTAGAGGGAGCAGGTAAAGAGTGAATCAGTGATTAGTGTTCCGTGGGCTTGTAGATTGTGCTACTGATTTGTTTTTAAGTTGATAACAAGTAGAAACATGCTAGATCCATCCTGCTTGATGTGGATGGTAGATACACACTTCCATCTTTCTCACTGTCTATTTTCATTCGTCTTTTATCTTTGGTGGGATACTATGAAGTTCTTTCTAAATTTCAGTTTCAAATTTATACCACACATTCACTTCTTGCAATATATTTGTTTTTGTGCCATTGTACAGGCTACCATTGGTATTGATTTTCTCTCAAAAACCATGTATCTGGAAGATCGTACCGTTCGACTGCAGTTGTGGTAATATAAAATTCATTAACTTTCATGATTTTTCATATCTAGGCGACTGCTTTCTTTTGTTTTTACTAATTCACATTACTCTTCCACAAGAATTATCCGTAAATCACATTTTCACGTCTGTATATTTATTAAGCATGTGATTTATTTGTCCTTGAGAATGGAAGAACTTGTGTGAATTATGTACTCAAGTCCATGGTGTAAATGATAGATTTCTTGAACAAAAGTTTTATGCAAACAACCCAATGTAGCTATTCCTTCTAGATTAAAACTATTCTCTTTTGAAACTTTAAAATAAGTTTAAGGATGCAGAGTCTTCAGACCCCGCGAAAGACATCTGAAAAGTCTGAATTTGAAATCCTTTTTGGTGGAAAATTCTAAAAAAATGATTGAACTGGTATGCTGCTCCAGTCTGTAGACTGTGGAGGTGGGTGCTCATTTGCTGCAATTAACGCTTCCATAGTATTCCCAATAAATTGTTAGAAATTTGAAAAAATTCTTTTGGGATGGATCAAATTTCAAATAGAAAAAGGGAGCCGCCTCAATGGTTGAAATTGTGTCCTCTGTCCTTTTGCAGAATCAATGTCTAAATATTGGAAAAACCAAACATAAAGGTTTCATAGCGAGGGAGCCCATGTTCTGGGATAGAATTAATGAAAGTAATGTTTCTCCAGAAAGCTCACTAATTGTTCGTGTTCCTATTCTTTAGATAATAGTTCTTGATCTCACATCATTGTTTATGTATGTGGATAAAATTGAAATTGTTAAATGTGAAAAAGGAGAGAAGTAAAGCCTCAAACCTGGGCAAGGAAGTTGGTGAAAATAACATTCCAGTTGGCACAAAGAGAATAAAACTCATGGTTAACAGTAAAAGGTTTGTACAAATCTGCATCAGGGAAATTCCCTAGAAATAATTTGATTCCACAAAACAAGAAAAACCTCTTGAAAGACTATTGTTTCTTTCCAACCATGAAGTCTAAATAAAAGTTCAAACTCATCTTCAACAAATACCACTGCCACTTGTCAGAACAAATGGGGAGTCAGTTCATTAGAGTCTCGTGGCTTCTTTTTAGGTCTCTTTTGCTAATCTTTTCTGTTACCATACTTTCTTTCTGAACATGACCTACTGGGGAGAACCTTTATGTTTTCTTTTAACTTGGCCTGGCCTGTTCACTTTGTGCCTGCTTCGACTCAAAGTTGAAAGAGGAGATACAAAAAGAAAAAATGCAAAGTGTTGTATCCTCTTCCAAAAATATACAAGACTTCATTTTACTGTACAAGGAACTAATTTAGGTTCTATGGAAATCTCATCTAGAAGCTAAGTGACAAGCAATGTTTAATATATCTCTGCGGTTTCTAATTCAATCAAATAAATGATAATGTTATAGGTGCTAATAAAAATTTTCCTTTGATGGTTAGGCACATCTTTTAAATTTATGTATTAATTTTTAATCGTGTGCACATATATTCACGATACTTCTAATTCTAGTTAATTGAAGTGTCTAACTTCCTTATTTGTCCTTTCCAGGAAATTGGGTTTTTGCTGTACGTTTTAAAATTTTATGTCACTTTGTTTCTCAGGGACACTGCTGGACAGGAAAGATTCAGAAGTTTAATACCAAGCTATATCAGGGACTCATCTGTAGCTGTCATCGTTTATGATGTTGCAAGTATGGAATCTGAAATTTTCTATAGAATGAGAATAATAATTAAGTAACCACTTGAAAATGTGTATTATTTCATGTGATAAACTATTTTGTATGCTCCTGGGGTGGATCTGGGATCTAATATCCGAAAGCCTTTAGATCCTTAATCTCATATAGTTAATTGATTGCATACTAGGGAGTCCTTGCCATGATGTGGTCAATGGACTATTTTTAACTGTTTTCATCCTGTTGCTACTCAGGCCGGCAAACTTTCCTAAACACTTCAAAGTGGATTGAGGAGGTGCGCACTGAGAGAGGCAGTGATGTCATTATAGTGCTTGTTGGGAACAAAACGGACCTTGTGGAGAAGAGGTAATACCTGGCCATGGTTTTTCTTTATTTTGTGTGCATGTTCCATAATTTTGGTTGTTTCAAATCTGAATAATTTGCAAACCCTGCTAGCAAAACTTTGATGATCTTGAAGTGGTGATGTATTTCATATTTTTTTTACCTTTTAAAAACTCAAAGCATAATTCAATTAATTGAAACATTAAGGTCTGTCTAAAGGTCATATATTTGAATTTTCCTCCTTACTGCTCGATGCAAATACTACTGTACCCCTTATGAGGCGACTCAGCAAACAATCTGTAATTAGTTATTTCGAAAGTTAGGCAATGTCTAGAACCTCATCCCCCTTCCCTCCTCCTTTTTTTTTTTGAAAAAAAAGAAACTAGTAGTAGTTTTTTTTTTTTTTGATATGCTACTTATTGTACTATAAGATTTCTGAATGTAGCTTTGAAAATAATTGAAATTTGAGTTTCATCTAGTTAGATCCTTCTCTTAAATTAATCACCTAGTTAAATATTGAACTTAGATGACACGTAATAGTATTATACTATGATAGTTAATGAAATTAGAAGAACAAAAGAACAGCAGGAAATAATTGTTCGAAACTTTATATATAGATACATAGTTTTCAACTTTTAGGAAATACTTCCAAGTGGTTCCTACTTATATAATGTTAGCAGTTGTATATTGTATCTTTATCAGATAATCTTACGTTTATGTTGTATGTGATGTGTGGAAAAAGAGTAAATATTGTTTGTGTAGAACATGATGTTGTGATCTACCTGTTGAGGATTCTGCATTGGTTAAACATAGGGACCTCATAATCTTAATAAGATAGTATCTAAAGGCTACTCTCTCATTGTTAGTTGTTCTGAGATGGAATCCCATGTTTTCTAATACTACGATTGTTCTTCTTGCTCTACATATTCATATTTGCATTTCCAAGAAGTCTTGTTTAGCATTTTGTTTCACCATTTTCCCATATGCTGCATCCCTAGGCAAGTCTCCATAGAGGAAGGAGAAGCCAAAGCCCGTGAACTAAATGTCATGTTTATCGAAACAAGTGCTAAAGCTGGATTCAATATCAAGGTAAAATCAATACGAAATCTCATTCCTACTATGACAGGAAGCTCTAATCTATGTTAAATCATGTTAGATAGTATAGTATTAAATTTGAGTTGATCCTTCAACTTAAGCTTTTGATCCATCCTTGGCTTAAAATAGCAAGTAATCCATCCTTGCAATGTTATTTTCTTTCCAATTAATATTGATTCCACTTGTTGGGCGTTCTTCATATTTCTAGCTCACAAGAGAGTGCGTTAGATGGAAATTTGCCTATTTTTGTCTTTGTAACTGGGGAACTATATTACTTCCACAGGCACTTTTCCGAAAAATTGCTGCAGCATTGCCGGGAATGGAAACTCTGTCGTCAACAAAACAAGAAGACATGGTCGATGTTAACTTGAAGTCCACAGGAAGTGGTGCCGCACAATCCCAGCCGCAGTCGAGCGGATGCGCGTGCTAATGAAGGACAATACGAGGGGTTATTGAAGGAATCCAGTGTTTCTTGGTTTTTGCTTTGAACACCTCAACCTTCTTGAACTGTCAGCCCATTCAGGTAACAAAGATGAGGTTTTATATCTATGAATGCCTTCTTGAGCAGAACTAAATTCGTAAAAATGTAATCGGTGGCAAAGAGTAGACTGAGTTGTTATTTTATCGAGTAATTTGATGTATTGGTTGGTGGAGTCATTGTTTGGGTTTTGGGATTCAGGAGATTGTAAAAAATAGAAAAAAAATTATGTGTTGGACTCGATTACAGAATTTGCTTTTATCTTGTAAGTTGTAATTCATCTCTAGAATATTTTGTTTTTCCATTGGATTTTTGTTATGTTCTGCCTGC

mRNA sequence

AAAAAAAAATGAAGGGTGAGAACGAACCGAGAAATTGGATCCGACCCGTTTGTAAAGAAATTTAGATCCTTGAGGAGTTAGTGCGAAACTGAAAGCAAATCAACACAAAGAACAAACCAAAATCCAGAGTTTCTTCCATTTGCAACTCATTTCATTTCATTCCCAAACCTTCTTCTCCATCCCTTAATTCTTCCTCTCTCGGAATTTTCAATCACAGATCTCCCCGGAAATGGCTCCCACCTCAGCTCTGGCGAAGTATAAGCTCGTCTTTCTCGGTGACCAGTCTGTTGGCAAAACCAGCATCATTACACGCTTCATGTACGACAAATTCGATAATACATATCAGGCTACCATTGGTATTGATTTTCTCTCAAAAACCATGTATCTGGAAGATCGTACCGTTCGACTGCAGTTGTGGGACACTGCTGGACAGGAAAGATTCAGAAGTTTAATACCAAGCTATATCAGGGACTCATCTGTAGCTGTCATCGTTTATGATGTTGCAAGCCGGCAAACTTTCCTAAACACTTCAAAGTGGATTGAGGAGGTGCGCACTGAGAGAGGCAGTGATGTCATTATAGTGCTTGTTGGGAACAAAACGGACCTTGTGGAGAAGAGGCAAGTCTCCATAGAGGAAGGAGAAGCCAAAGCCCGTGAACTAAATGTCATGTTTATCGAAACAAGTGCTAAAGCTGGATTCAATATCAAGGCACTTTTCCGAAAAATTGCTGCAGCATTGCCGGGAATGGAAACTCTGTCGTCAACAAAACAAGAAGACATGGTCGATGTTAACTTGAAGTCCACAGGAAGTGGTGCCGCACAATCCCAGCCGCAGTCGAGCGGATGCGCGTGCTAATGAAGGACAATACGAGGGGTTATTGAAGGAATCCAGTGTTTCTTGGTTTTTGCTTTGAACACCTCAACCTTCTTGAACTGTCAGCCCATTCAGGTAACAAAGATGAGGTTTTATATCTATGAATGCCTTCTTGAGCAGAACTAAATTCGTAAAAATGTAATCGGTGGCAAAGAGTAGACTGAGTTGTTATTTTATCGAGTAATTTGATGTATTGGTTGGTGGAGTCATTGTTTGGGTTTTGGGATTCAGGAGATTGTAAAAAATAGAAAAAAAATTATGTGTTGGACTCGATTACAGAATTTGCTTTTATCTTGTAAGTTGTAATTCATCTCTAGAATATTTTGTTTTTCCATTGGATTTTTGTTATGTTCTGCCTGC

Coding sequence (CDS)

ATGGCTCCCACCTCAGCTCTGGCGAAGTATAAGCTCGTCTTTCTCGGTGACCAGTCTGTTGGCAAAACCAGCATCATTACACGCTTCATGTACGACAAATTCGATAATACATATCAGGCTACCATTGGTATTGATTTTCTCTCAAAAACCATGTATCTGGAAGATCGTACCGTTCGACTGCAGTTGTGGGACACTGCTGGACAGGAAAGATTCAGAAGTTTAATACCAAGCTATATCAGGGACTCATCTGTAGCTGTCATCGTTTATGATGTTGCAAGCCGGCAAACTTTCCTAAACACTTCAAAGTGGATTGAGGAGGTGCGCACTGAGAGAGGCAGTGATGTCATTATAGTGCTTGTTGGGAACAAAACGGACCTTGTGGAGAAGAGGCAAGTCTCCATAGAGGAAGGAGAAGCCAAAGCCCGTGAACTAAATGTCATGTTTATCGAAACAAGTGCTAAAGCTGGATTCAATATCAAGGCACTTTTCCGAAAAATTGCTGCAGCATTGCCGGGAATGGAAACTCTGTCGTCAACAAAACAAGAAGACATGGTCGATGTTAACTTGAAGTCCACAGGAAGTGGTGCCGCACAATCCCAGCCGCAGTCGAGCGGATGCGCGTGCTAA

Protein sequence

MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNLKSTGSGAAQSQPQSSGCAC

Homology

[Close]

BLAST of IVF0003857 vs. ExPASy Swiss-Prot
Match: O80501 (Ras-related protein RABH1b OS=Arabidopsis thaliana OX=3702 GN=RABH1B PE=1 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 1.2e-101
Identity = 191/208 (91.83%), Postives = 201/208 (96.63%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAP SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQ+FLNT+KWI+EVRTERGSDVI+VLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWIDEVRTERGSDVIVVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLV+KRQVSIEE EAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVDKRQVSIEEAEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSTGSGAAQSQPQSSGCAC 209
           QEDMVDVNLKS+ + A+ +Q QS GC+C
Sbjct: 181 QEDMVDVNLKSSNANASLAQQQSGGCSC 208

[Close]

BLAST of IVF0003857 vs. ExPASy Swiss-Prot
Match: Q9LFT9 (Ras-related protein RABH1e OS=Arabidopsis thaliana OX=3702 GN=RABH1E PE=2 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 1.3e-95
Identity = 184/208 (88.46%), Postives = 193/208 (92.79%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MA  S LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVA+RQ+FLNTSKWIE+VRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIEDVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLV+KRQVSIEEG+ KAR+  V+FIETSAKAGFNIK LFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVDKRQVSIEEGDNKARDYGVIFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSTGSGAAQSQPQSSGCAC 209
           QEDMVDVNLK T S +AQ + Q  GCAC
Sbjct: 181 QEDMVDVNLK-TSSNSAQGEQQRGGCAC 207

[Close]

BLAST of IVF0003857 vs. ExPASy Swiss-Prot
Match: Q9SID8 (Ras-related protein RABH1d OS=Arabidopsis thaliana OX=3702 GN=RABH1D PE=3 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 9.6e-91
Identity = 175/208 (84.13%), Postives = 185/208 (88.94%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MA  S LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAV+VYDVA+R +FLNTSKWIEEVR ER  DVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVANRLSFLNTSKWIEEVRNERAGDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLVEKRQVSIEEG++K RE  VMFIETSAKAGFNIK LFRKIAAALPGME+ S+TK
Sbjct: 121 GNKTDLVEKRQVSIEEGDSKGREYGVMFIETSAKAGFNIKPLFRKIAAALPGMESYSNTK 180

Query: 181 QEDMVDVNLKSTGSGAAQSQPQSSGCAC 209
            EDMVDVNLK T S ++Q   Q   C+C
Sbjct: 181 NEDMVDVNLKPT-SNSSQGDQQGGACSC 207

[Close]

BLAST of IVF0003857 vs. ExPASy Swiss-Prot
Match: Q9SMR4 (Ras-related protein RABH1c OS=Arabidopsis thaliana OX=3702 GN=RABH1C PE=1 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 8.7e-84
Identity = 168/215 (78.14%), Postives = 186/215 (86.51%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MA  S LAK+KLVFLGDQSVGKTSIITRFMYDKFD TYQ TIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MASVSPLAKFKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERG-SDVIIVL 120
           QLWDTAGQERFRSLIPSYIRDSSVA++VYDV++RQTFLNTSKWIE+V  ERG S+VIIVL
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVL 120

Query: 121 VGNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLS-S 180
           VGNKTDLVEKRQVSI EGE K +E  VMFIETSAK  FNIKALFRKIAAALPG+++ S +
Sbjct: 121 VGNKTDLVEKRQVSISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAALPGVDSYSLA 180

Query: 181 TKQEDMVDVNLKSTGSGAAQSQPQ-----SSGCAC 209
           TK +DMVDVNLK+T S ++Q + Q       GC+C
Sbjct: 181 TKSDDMVDVNLKTT-SNSSQGEQQGGAGGGGGCSC 214

[Close]

BLAST of IVF0003857 vs. ExPASy Swiss-Prot
Match: P20340 (Ras-related protein Rab-6A OS=Homo sapiens OX=9606 GN=RAB6A PE=1 SV=3)

HSP 1 Score: 301.2 bits (770), Expect = 9.0e-81
Identity = 152/203 (74.88%), Postives = 176/203 (86.70%), Query Frame = 0


Query: 7   LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66
           L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA
Sbjct: 11  LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 70

Query: 67  GQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLVGNKTDL 126
           GQERFRSLIPSYIRDS+VAV+VYD+ +  +F  T+KWI++VRTERGSDVII+LVGNKTDL
Sbjct: 71  GQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDL 130

Query: 127 VEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVD 186
            +KRQVSIEEGE KA+ELNVMFIETSAKAG+N+K LFR++AAALPGME+     +EDM+D
Sbjct: 131 ADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMID 190

Query: 187 VNLKSTGSGAAQSQPQS-SGCAC 209
           + L+       Q QP S  GC+C
Sbjct: 191 IKLEK-----PQEQPVSEGGCSC 208

[Close]

BLAST of IVF0003857 vs. ExPASy TrEMBL
Match: A0A5A7TB19 (Ras-related protein RABH1b-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004050 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 2.0e-107
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSTGSGAAQSQPQSSGCAC 209
           QEDMVDVNLKSTGSGAAQSQPQSSGCAC
Sbjct: 181 QEDMVDVNLKSTGSGAAQSQPQSSGCAC 208

[Close]

BLAST of IVF0003857 vs. ExPASy TrEMBL
Match: A0A0A0LI95 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G910690 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 2.0e-107
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSTGSGAAQSQPQSSGCAC 209
           QEDMVDVNLKSTGSGAAQSQPQSSGCAC
Sbjct: 181 QEDMVDVNLKSTGSGAAQSQPQSSGCAC 208

[Close]

BLAST of IVF0003857 vs. ExPASy TrEMBL
Match: A0A1S3CQC2 (ras-related protein RABH1b OS=Cucumis melo OX=3656 GN=LOC103503500 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 2.0e-107
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSTGSGAAQSQPQSSGCAC 209
           QEDMVDVNLKSTGSGAAQSQPQSSGCAC
Sbjct: 181 QEDMVDVNLKSTGSGAAQSQPQSSGCAC 208

[Close]

BLAST of IVF0003857 vs. ExPASy TrEMBL
Match: A0A6J1K5U1 (ras-related protein RABH1b OS=Cucurbita maxima OX=3661 GN=LOC111491433 PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 1.7e-106
Identity = 205/208 (98.56%), Postives = 207/208 (99.52%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTF+NTSKWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFVNTSKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLVEKRQVS+EEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVEKRQVSVEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSTGSGAAQSQPQSSGCAC 209
           QEDMVDVNLKSTGSGAAQSQPQS GCAC
Sbjct: 181 QEDMVDVNLKSTGSGAAQSQPQSGGCAC 208

[Close]

BLAST of IVF0003857 vs. ExPASy TrEMBL
Match: A0A6J1H3Q8 (ras-related protein RABH1b OS=Cucurbita moschata OX=3662 GN=LOC111459827 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 4.9e-106
Identity = 204/208 (98.08%), Postives = 207/208 (99.52%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTF+NTSKWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFVNTSKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLVEKRQVS+EEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVEKRQVSVEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSTGSGAAQSQPQSSGCAC 209
           QEDMVDVNLKS+GSGAAQSQPQS GCAC
Sbjct: 181 QEDMVDVNLKSSGSGAAQSQPQSGGCAC 208

[Close]

BLAST of IVF0003857 vs. NCBI nr
Match: XP_004148503.1 (ras-related protein RABH1b [Cucumis sativus] >XP_008465921.1 PREDICTED: ras-related protein RABH1b [Cucumis melo] >KAA0038529.1 ras-related protein RABH1b-like isoform X1 [Cucumis melo var. makuwa] >KGN60432.1 hypothetical protein Csa_001061 [Cucumis sativus] >TYK31126.1 ras-related protein RABH1b-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 399 bits (1025), Expect = 6.84e-140
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSTGSGAAQSQPQSSGCAC 208
           QEDMVDVNLKSTGSGAAQSQPQSSGCAC
Sbjct: 181 QEDMVDVNLKSTGSGAAQSQPQSSGCAC 208

[Close]

BLAST of IVF0003857 vs. NCBI nr
Match: XP_038889006.1 (ras-related protein RABH1b [Benincasa hispida])

HSP 1 Score: 397 bits (1021), Expect = 2.78e-139
Identity = 207/208 (99.52%), Postives = 207/208 (99.52%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSTGSGAAQSQPQSSGCAC 208
           QEDMVDVNLKSTGSGAAQSQPQS GCAC
Sbjct: 181 QEDMVDVNLKSTGSGAAQSQPQSGGCAC 208

[Close]

BLAST of IVF0003857 vs. NCBI nr
Match: XP_022996115.1 (ras-related protein RABH1b [Cucurbita maxima])

HSP 1 Score: 396 bits (1017), Expect = 1.13e-138
Identity = 205/208 (98.56%), Postives = 207/208 (99.52%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTF+NTSKWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFVNTSKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLVEKRQVS+EEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVEKRQVSVEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSTGSGAAQSQPQSSGCAC 208
           QEDMVDVNLKSTGSGAAQSQPQS GCAC
Sbjct: 181 QEDMVDVNLKSTGSGAAQSQPQSGGCAC 208

[Close]

BLAST of IVF0003857 vs. NCBI nr
Match: XP_022958673.1 (ras-related protein RABH1b [Cucurbita moschata] >XP_023533385.1 ras-related protein RABH1b [Cucurbita pepo subsp. pepo] >KAG6606223.1 Ras-related protein RABH1b, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 394 bits (1013), Expect = 4.62e-138
Identity = 204/208 (98.08%), Postives = 207/208 (99.52%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTF+NTSKWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFVNTSKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLVEKRQVS+EEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVEKRQVSVEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSTGSGAAQSQPQSSGCAC 208
           QEDMVDVNLKS+GSGAAQSQPQS GCAC
Sbjct: 181 QEDMVDVNLKSSGSGAAQSQPQSGGCAC 208

[Close]

BLAST of IVF0003857 vs. NCBI nr
Match: XP_022159735.1 (ras-related protein RABH1b [Momordica charantia])

HSP 1 Score: 394 bits (1012), Expect = 6.56e-138
Identity = 205/208 (98.56%), Postives = 206/208 (99.04%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAP SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSTGSGAAQSQPQSSGCAC 208
           QEDMVDVNLKS+GSGAAQSQPQS GCAC
Sbjct: 181 QEDMVDVNLKSSGSGAAQSQPQSGGCAC 208

[Close]

BLAST of IVF0003857 vs. TAIR 10
Match: AT2G44610.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 370.5 bits (950), Expect = 8.6e-103
Identity = 191/208 (91.83%), Postives = 201/208 (96.63%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MAP SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQ+FLNT+KWI+EVRTERGSDVI+VLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWIDEVRTERGSDVIVVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLV+KRQVSIEE EAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVDKRQVSIEEAEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSTGSGAAQSQPQSSGCAC 209
           QEDMVDVNLKS+ + A+ +Q QS GC+C
Sbjct: 181 QEDMVDVNLKSSNANASLAQQQSGGCSC 208

[Close]

BLAST of IVF0003857 vs. TAIR 10
Match: AT5G10260.1 (RAB GTPase homolog H1E )

HSP 1 Score: 350.5 bits (898), Expect = 9.2e-97
Identity = 184/208 (88.46%), Postives = 193/208 (92.79%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MA  S LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVA+RQ+FLNTSKWIE+VRTERGSDVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVANRQSFLNTSKWIEDVRTERGSDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLV+KRQVSIEEG+ KAR+  V+FIETSAKAGFNIK LFRKIAAALPGMETLSSTK
Sbjct: 121 GNKTDLVDKRQVSIEEGDNKARDYGVIFIETSAKAGFNIKPLFRKIAAALPGMETLSSTK 180

Query: 181 QEDMVDVNLKSTGSGAAQSQPQSSGCAC 209
           QEDMVDVNLK T S +AQ + Q  GCAC
Sbjct: 181 QEDMVDVNLK-TSSNSAQGEQQRGGCAC 207

[Close]

BLAST of IVF0003857 vs. TAIR 10
Match: AT2G22290.1 (RAB GTPase homolog H1D )

HSP 1 Score: 334.3 bits (856), Expect = 6.8e-92
Identity = 175/208 (84.13%), Postives = 185/208 (88.94%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MA  S LAKYKLVFLGDQSVGKTSIITRFMYDKFD TYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MASVSPLAKYKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLV 120
           QLWDTAGQERFRSLIPSYIRDSSVAV+VYDVA+R +FLNTSKWIEEVR ER  DVIIVLV
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAVVVYDVANRLSFLNTSKWIEEVRNERAGDVIIVLV 120

Query: 121 GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
           GNKTDLVEKRQVSIEEG++K RE  VMFIETSAKAGFNIK LFRKIAAALPGME+ S+TK
Sbjct: 121 GNKTDLVEKRQVSIEEGDSKGREYGVMFIETSAKAGFNIKPLFRKIAAALPGMESYSNTK 180

Query: 181 QEDMVDVNLKSTGSGAAQSQPQSSGCAC 209
            EDMVDVNLK T S ++Q   Q   C+C
Sbjct: 181 NEDMVDVNLKPT-SNSSQGDQQGGACSC 207

[Close]

BLAST of IVF0003857 vs. TAIR 10
Match: AT4G39890.1 (RAB GTPase homolog H1C )

HSP 1 Score: 311.2 bits (796), Expect = 6.2e-85
Identity = 168/215 (78.14%), Postives = 186/215 (86.51%), Query Frame = 0


Query: 1   MAPTSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
           MA  S LAK+KLVFLGDQSVGKTSIITRFMYDKFD TYQ TIGIDFLSKTMYLEDRTVRL
Sbjct: 1   MASVSPLAKFKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRL 60

Query: 61  QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERG-SDVIIVL 120
           QLWDTAGQERFRSLIPSYIRDSSVA++VYDV++RQTFLNTSKWIE+V  ERG S+VIIVL
Sbjct: 61  QLWDTAGQERFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVL 120

Query: 121 VGNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLS-S 180
           VGNKTDLVEKRQVSI EGE K +E  VMFIETSAK  FNIKALFRKIAAALPG+++ S +
Sbjct: 121 VGNKTDLVEKRQVSISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAALPGVDSYSLA 180

Query: 181 TKQEDMVDVNLKSTGSGAAQSQPQ-----SSGCAC 209
           TK +DMVDVNLK+T S ++Q + Q       GC+C
Sbjct: 181 TKSDDMVDVNLKTT-SNSSQGEQQGGAGGGGGCSC 214

[Close]

BLAST of IVF0003857 vs. TAIR 10
Match: AT5G64990.1 (RAB GTPase homolog H1A )

HSP 1 Score: 289.7 bits (740), Expect = 1.9e-78
Identity = 152/199 (76.38%), Postives = 166/199 (83.42%), Query Frame = 0


Query: 10  YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69
           YKLVFLGDQ VGKTSIIT FMY KFD +YQATIGIDFLSKT   EDRT RLQLWDTAGQE
Sbjct: 8   YKLVFLGDQGVGKTSIITCFMYGKFDTSYQATIGIDFLSKTTRYEDRTFRLQLWDTAGQE 67

Query: 70  RFRSLIPSYIRDSSVAVIVYDVASRQTFLNTSKWIEEVRTERGSDVIIVLVGNKTDLVEK 129
           RF+SL+PSYIRDSSVAVIVYDVAS+Q+F+NTSKWIEEVR ERGS VIIVLVGNKTDLV K
Sbjct: 68  RFKSLVPSYIRDSSVAVIVYDVASKQSFINTSKWIEEVRAERGSYVIIVLVGNKTDLVNK 127

Query: 130 RQVSIEEGEAKARELNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTKQEDMVDVNL 189
           RQVSIEEGE KARE   +F+ETSAKAGFNIK LF KI +AL G E +S TKQED+VDVNL
Sbjct: 128 RQVSIEEGENKAREFGALFMETSAKAGFNIKPLFCKITSALQGNEAVSWTKQEDLVDVNL 187

Query: 190 KSTGSGAAQSQPQSSGCAC 209
           K     +  +  Q S C+C
Sbjct: 188 KPLMFSSQANHQQESNCSC 206

The following BLAST results are available for this feature:

BLAST of IVF0003857 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80501	1.2e-101	91.83	Ras-related protein RABH1b OS=Arabidopsis thaliana OX=3702 GN=RABH1B PE=1 SV=1	[more]
Q9LFT9	1.3e-95	88.46	Ras-related protein RABH1e OS=Arabidopsis thaliana OX=3702 GN=RABH1E PE=2 SV=1	[more]
Q9SID8	9.6e-91	84.13	Ras-related protein RABH1d OS=Arabidopsis thaliana OX=3702 GN=RABH1D PE=3 SV=1	[more]
Q9SMR4	8.7e-84	78.14	Ras-related protein RABH1c OS=Arabidopsis thaliana OX=3702 GN=RABH1C PE=1 SV=1	[more]
P20340	9.0e-81	74.88	Ras-related protein Rab-6A OS=Homo sapiens OX=9606 GN=RAB6A PE=1 SV=3	[more]

BLAST of IVF0003857 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TB19	2.0e-107	100.00	Ras-related protein RABH1b-like isoform X1 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A0A0LI95	2.0e-107	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G910690 PE=4 SV=1	[more]
A0A1S3CQC2	2.0e-107	100.00	ras-related protein RABH1b OS=Cucumis melo OX=3656 GN=LOC103503500 PE=4 SV=1	[more]
A0A6J1K5U1	1.7e-106	98.56	ras-related protein RABH1b OS=Cucurbita maxima OX=3661 GN=LOC111491433 PE=4 SV=1	[more]
A0A6J1H3Q8	4.9e-106	98.08	ras-related protein RABH1b OS=Cucurbita moschata OX=3662 GN=LOC111459827 PE=4 SV...	[more]

BLAST of IVF0003857 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148503.1	6.84e-140	100.00	ras-related protein RABH1b [Cucumis sativus] >XP_008465921.1 PREDICTED: ras-rela...	[more]
XP_038889006.1	2.78e-139	99.52	ras-related protein RABH1b [Benincasa hispida]	[more]
XP_022996115.1	1.13e-138	98.56	ras-related protein RABH1b [Cucurbita maxima]	[more]
XP_022958673.1	4.62e-138	98.08	ras-related protein RABH1b [Cucurbita moschata] >XP_023533385.1 ras-related prot...	[more]
XP_022159735.1	6.56e-138	98.56	ras-related protein RABH1b [Momordica charantia]	[more]

BLAST of IVF0003857 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44610.1	8.6e-103	91.83	Ras-related small GTP-binding family protein	[more]
AT5G10260.1	9.2e-97	88.46	RAB GTPase homolog H1E	[more]
AT2G22290.1	6.8e-92	84.13	RAB GTPase homolog H1D	[more]
AT4G39890.1	6.2e-85	78.14	RAB GTPase homolog H1C	[more]
AT5G64990.1	1.9e-78	76.38	RAB GTPase homolog H1A	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 113..126 score: 53.75 coord: 10..31 score: 41.61 coord: 33..49 score: 33.83 coord: 51..73 score: 48.05 coord: 148..170 score: 36.17
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 15..208 e-value: 5.9E-9 score: 45.8
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 7..173 e-value: 1.4E-34 score: 130.8
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 10..173 e-value: 5.7E-87 score: 304.9
None	No IPR available	PANTHER	PTHR24073	DRAB5-RELATED	coord: 1..208
None	No IPR available	PANTHER	PTHR24073:SF1132	GTP-BINDING PROTEIN RAB6	coord: 1..208
None	No IPR available	PROSITE	PS51420	RHO	coord: 3..176 score: 10.58555
None	No IPR available	PROSITE	PS51419	RAB	coord: 2..208 score: 31.52824
None	No IPR available	CDD	cd01861	Rab6	coord: 10..170 e-value: 2.15596E-116 score: 326.116
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 12..172 e-value: 3.5E-14 score: 61.1
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 11..169 e-value: 1.0E-57 score: 194.3
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 5..208 score: 17.913336
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 9..166 e-value: 2.9E-27 score: 93.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 5..203 e-value: 1.6E-66 score: 225.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0003857.1	IVF0003857.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006891	intra-Golgi vesicle-mediated transport
biological_process	GO:0042147	retrograde transport, endosome to Golgi
biological_process	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding