IVF0003821 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGTGTTGTCTGCTACACAATCTTATCAATAGAGAGATGACTAACAGTGAAATAATCGATGATTTGGATGAGGGTGATTCAACATACGCTACAACTGGAGGTGACGAGATTAATTACATTGAGGCTTCAAACGGATGGAGTGAATGGAGGGATCAATTGGCTCGTACGATGTTCAGTAATTGGGAGTTACATGACCAGTAG ATGGTGTGTTGTCTGCTACACAATCTTATCAATAGAGAGATGACTAACAGTGAAATAATCGATGATTTGGATGAGGGTGATTCAACATACGCTACAACTGGAGGTGACGAGATTAATTACATTGAGGCTTCAAACGGATGGAGTGAATGGAGGGATCAATTGGCTCGTACGATGTTCAGTAATTGGGAGTTACATGACCAGTAG ATGGTGTGTTGTCTGCTACACAATCTTATCAATAGAGAGATGACTAACAGTGAAATAATCGATGATTTGGATGAGGGTGATTCAACATACGCTACAACTGGAGGTGACGAGATTAATTACATTGAGGCTTCAAACGGATGGAGTGAATGGAGGGATCAATTGGCTCGTACGATGTTCAGTAATTGGGAGTTACATGACCAGTAG MVCCLLHNLINREMTNSEIIDDLDEGDSTYATTGGDEINYIEASNGWSEWRDQLARTMFSNWELHDQ Homology
BLAST of IVF0003821 vs. ExPASy TrEMBL
Match: A0A5A7V6M3 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold178G00030 PE=3 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 5.6e-27 Identity = 61/67 (91.04%), Postives = 62/67 (92.54%), Query Frame = 0
BLAST of IVF0003821 vs. ExPASy TrEMBL
Match: A0A5D3DG22 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold523G00290 PE=3 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 7.3e-27 Identity = 61/67 (91.04%), Postives = 62/67 (92.54%), Query Frame = 0
BLAST of IVF0003821 vs. ExPASy TrEMBL
Match: A0A5A7TJS2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold335G00710 PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 8.0e-26 Identity = 60/67 (89.55%), Postives = 61/67 (91.04%), Query Frame = 0
BLAST of IVF0003821 vs. ExPASy TrEMBL
Match: A0A5D3D8J6 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold307G00030 PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 8.0e-26 Identity = 60/67 (89.55%), Postives = 61/67 (91.04%), Query Frame = 0
BLAST of IVF0003821 vs. ExPASy TrEMBL
Match: A0A5D3CHV9 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold107G00220 PE=3 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 1.8e-25 Identity = 58/66 (87.88%), Postives = 60/66 (90.91%), Query Frame = 0
BLAST of IVF0003821 vs. NCBI nr
Match: KAA0063753.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK05505.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]) HSP 1 Score: 131 bits (329), Expect = 4.68e-36 Identity = 61/67 (91.04%), Postives = 62/67 (92.54%), Query Frame = 0
BLAST of IVF0003821 vs. NCBI nr
Match: TYK10940.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa]) HSP 1 Score: 126 bits (316), Expect = 1.12e-34 Identity = 58/66 (87.88%), Postives = 60/66 (90.91%), Query Frame = 0
BLAST of IVF0003821 vs. NCBI nr
Match: XP_008441953.1 (PREDICTED: uncharacterized protein LOC103485952 [Cucumis melo] >KAA0047737.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]) HSP 1 Score: 126 bits (316), Expect = 4.44e-34 Identity = 59/67 (88.06%), Postives = 61/67 (91.04%), Query Frame = 0
BLAST of IVF0003821 vs. NCBI nr
Match: TYK08389.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa]) HSP 1 Score: 126 bits (316), Expect = 4.44e-34 Identity = 59/67 (88.06%), Postives = 61/67 (91.04%), Query Frame = 0
BLAST of IVF0003821 vs. NCBI nr
Match: KAA0037721.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa]) HSP 1 Score: 124 bits (312), Expect = 9.23e-34 Identity = 58/66 (87.88%), Postives = 60/66 (90.91%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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