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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGCTTCAGGTGATGGAAAAATGCATATCAAAGGTGGCATCTACTGATGAAAGGATCAAACCTTTTCTTGTCACTGGGGAAGAGAAAGACAAAGATCGGATTCAACCGAGAGAGACGCCTCGTCAGGCACTCGATCTATATCTATGCAAGTTCAAAAGGTATGATTTAGCAGTGTTATAGAAAAAGGGCATGAGTATAATCAAAAAATTCATGATGATTCTTTTGAAGGACACTGTTAGACATAGAAGGCTCAAAGCTGATTTAG mRNA sequence ATGCTTCAGGTGATGGAAAAATGCATATCAAAGGTGGCATCTACTGATGAAAGGATCAAACCTTTTCTTGTCACTGGGGAAGAGAAAGACAAAGATCGGATTCAACCGAGAGAGACGCCTCGTCAGGCACTCGATCTATATCTATGCAAGACACTGTTAGACATAGAAGGCTCAAAGCTGATTTAG Coding sequence (CDS) ATGCTTCAGGTGATGGAAAAATGCATATCAAAGGTGGCATCTACTGATGAAAGGATCAAACCTTTTCTTGTCACTGGGGAAGAGAAAGACAAAGATCGGATTCAACCGAGAGAGACGCCTCGTCAGGCACTCGATCTATATCTATGCAAGACACTGTTAGACATAGAAGGCTCAAAGCTGATTTAG Protein sequence MLQVMEKCISKVASTDERIKPFLVTGEEKDKDRIQPRETPRQALDLYLCKTLLDIEGSKLI
Homology
BLAST of IVF0003815 vs. ExPASy TrEMBL
Match: E5GBC8 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 2.1e-17 Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = 0
Query: 2 LQVMEKCISKVASTDERIKPFLVTGEEKDKDRIQPRETPRQALDLYLCK 51
L VMEKCISK+ASTDERIKPFLVTGEEKDKDRIQPRETPRQALDLYLCK
Sbjct: 425 LGVMEKCISKMASTDERIKPFLVTGEEKDKDRIQPRETPRQALDLYLCK 473
BLAST of IVF0003815 vs. ExPASy TrEMBL
Match: A0A0A0KNG6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G140520 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 9.3e-13 Identity = 45/61 (73.77%), Postives = 48/61 (78.69%), Query Frame = 0
Query: 1 MLQVMEKCISKVASTDERIKPFLVTGEEKDKDRIQPRETPRQALDLYLCKTLLDIEGSKL 60
M QV E+CISK+ STDE IKPFL+TGEEKDKDRIQPRET L L TLLDIEGSKL
Sbjct: 1 MPQVTEQCISKMESTDESIKPFLITGEEKDKDRIQPRET------LDLSVTLLDIEGSKL 55
Query: 61 I 62
I
Sbjct: 61 I 55
BLAST of IVF0003815 vs. NCBI nr
Match: ADN33770.1 (hypothetical protein [Cucumis melo subsp. melo]) HSP 1 Score: 97.4 bits (241), Expect = 8.06e-22 Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = 0
Query: 2 LQVMEKCISKVASTDERIKPFLVTGEEKDKDRIQPRETPRQALDLYLCK 50
L VMEKCISK+ASTDERIKPFLVTGEEKDKDRIQPRETPRQALDLYLCK
Sbjct: 425 LGVMEKCISKMASTDERIKPFLVTGEEKDKDRIQPRETPRQALDLYLCK 473
BLAST of IVF0003815 vs. NCBI nr
Match: KGN49927.1 (hypothetical protein Csa_000013 [Cucumis sativus]) HSP 1 Score: 81.6 bits (200), Expect = 7.86e-19 Identity = 46/61 (75.41%), Postives = 50/61 (81.97%), Query Frame = 0
Query: 1 MLQVMEKCISKVASTDERIKPFLVTGEEKDKDRIQPRETPRQALDLYLCKTLLDIEGSKL 60
M QV E+CISK+ STDE IKPFL+TGEEKDKDRIQPRET LDL + TLLDIEGSKL
Sbjct: 1 MPQVTEQCISKMESTDESIKPFLITGEEKDKDRIQPRET----LDLSV--TLLDIEGSKL 55
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| E5GBC8 | 2.1e-17 | 95.92 | Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1 | [more] |
| A0A0A0KNG6 | 9.3e-13 | 73.77 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G140520 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| ADN33770.1 | 8.06e-22 | 95.92 | hypothetical protein [Cucumis melo subsp. melo] | [more] |
| KGN49927.1 | 7.86e-19 | 75.41 | hypothetical protein Csa_000013 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0016021 |
integral component of membrane |
|
