Homology
BLAST of IVF0003789 vs. ExPASy Swiss-Prot
Match:
Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)
HSP 1 Score: 278.5 bits (711), Expect = 4.1e-73
Identity = 233/908 (25.66%), Postives = 373/908 (41.08%), Query Frame = 0
Query: 627 YPDIFPEELPGLP---SHREVEFAIELESGTVPIFRAPYRMAPVELKELKVQLQKVFDKG 686
Y +I +LP P ++ V+ IE++ G PY + +E+ +QK+ D
Sbjct: 564 YREIIRNDLPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNK 623
Query: 687 FIRPSVSPWGAPVLFVKKKDGSMRLCIDYRDLNKVTVKNRYPLSRIDDFFDQLQGATVFS 746
FI PS SP +PV+ V KKDG+ RLC+DYR LNK T+ + +PL RID+ ++ A +F+
Sbjct: 624 FIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFT 683
Query: 747 KIDFRSGYHQLRIKDGDVPKTAFRSRYEHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDT 806
+D SGYHQ+ ++ D KTAF + YE+ VM FGL NAP+ F M FR+
Sbjct: 684 TLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--R 743
Query: 807 FVIVFIDDILIYFKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAG 866
FV V++DDILI+ ++ EH +HL VL+ L++ L K KC+F ++ FLG+ +
Sbjct: 744 FVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQK 803
Query: 867 VSVDPAKIEALTSWTRPSTVSKVRSFLGLAGYYRRFVENFSCIATPL-------PQLTRK 926
++ K A+ + P TV + + FLG+ YYRRF+ N S IA P+ Q T K
Sbjct: 804 IAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKSQWTEK 863
Query: 927 ----------------------------------------------------GAPFVWSK 986
G +SK
Sbjct: 864 QDKAIDKLKDALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSK 923
Query: 987 ACKA-------------------------------------------------------- 1046
+ ++
Sbjct: 924 SLESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRW 983
Query: 1047 ------------------NVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLVGAVTM 1106
NVVADA+SR V +R + L AV +
Sbjct: 984 LDDLATYDFTLEYLAGPKNVVADAISRAVYTITPETSRPIDTESWKSYYKSDPLCSAVLI 1043
Query: 1107 QLAQLTVQSTLRQRIIDAQSN----DLSLVEKRGLAEAAQAVEFS-------ISSDGSTK 1166
+ +LT + + + +S +LS ++ + + + + + +
Sbjct: 1044 HMKELTQHNVTPEDMSAFRSYQKKLELSETFRKNYSLEDEMIYYQDRLVVPIKQQNAVMR 1103
Query: 1167 MYQD----------------LKRVYWWRNMKREVAEFVSKCLVCQLVKAPRQKPAGLLQP 1226
+Y D + +Y+W ++ + +++ C+ CQL+K+ R + GLLQP
Sbjct: 1104 LYHDHTLFGGHFGVTVTLAKISPIYYWPKLQHSIIQYIRTCVQCQLIKSHRPRLHGLLQP 1163
Query: 1227 LSIPEWKWENVSMDFITRQPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWAQLYMS 1286
L I E +W ++SMDF+T P T +I VVVDR +K AHF+ + T ++ L
Sbjct: 1164 LPIAEGRWLDISMDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDATQLIDLLFR 1223
Query: 1287 EIVRLHGVPVSIVSDRDAHFTSN------------------------------FGRVCRL 1333
I HG P +I SDRD T++ + RL
Sbjct: 1224 YIFSYHGFPRTITSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSERTIQTLNRL 1283
BLAST of IVF0003789 vs. ExPASy Swiss-Prot
Match:
P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)
HSP 1 Score: 276.2 bits (705), Expect = 2.0e-72
Identity = 214/865 (24.74%), Postives = 369/865 (42.66%), Query Frame = 0
Query: 644 VEFAIELESGTVPIFRAPYRMAPVELKELKVQLQKVFDKGFIRPSVSPWGAPVLFVKKKD 703
+EF +EL + Y + P +++ + ++ + G IR S + PV+FV KK+
Sbjct: 400 LEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKE 459
Query: 704 GSMRLCIDYRDLNKVTVKNRYPLSRIDDFFDQLQGATVFSKIDFRSGYHQLRIKDGDVPK 763
G++R+ +DY+ LNK N YPL I+ ++QG+T+F+K+D +S YH +R++ GD K
Sbjct: 460 GTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHK 519
Query: 764 TAFRSRYEHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHE 823
AFR +E++VM +G++ AP F +N + E ++ V+ ++DDILI+ K+E+EH
Sbjct: 520 LAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHV 579
Query: 824 EHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEALTSWTRPSTV 883
+H++ VLQ L++ L +KCEF QV F+G+ +S+ G + I+ + W +P
Sbjct: 580 KHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNR 639
Query: 884 SKVRSFLGLAGYYRRFVENFSCIATPLPQLTRKGAPFVWS----------KACKAN---- 943
++R FLG Y R+F+ S + PL L +K + W+ K C +
Sbjct: 640 KELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVL 699
Query: 944 ------------------VVADALSRK--------VSHSAALITRQAPLHRDLERAEIAV 1003
V LS+K V + +A +++ + ++ +A+
Sbjct: 700 RHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAI 759
Query: 1004 --------------------------LVGAVTMQ-------------------------- 1063
L+G +T +
Sbjct: 760 IKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRP 819
Query: 1064 -------------------------------LAQLTVQSTLRQRIIDAQSNDLSLV---- 1123
+ Q+++ + +++ +ND L+
Sbjct: 820 GSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLN 879
Query: 1124 -EKRGLAEAAQA-----------------------------VEFSISSDGSTKMYQDLKR 1183
E + + E Q E + G + + R
Sbjct: 880 NEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILR 939
Query: 1184 VYWWRNMKREVAEFVSKCLVCQLVKAPRQKPAGLLQPLSIPEWKWENVSMDFITRQPRTL 1243
+ W+ +++++ E+V C CQ+ K+ KP G LQP+ E WE++SMDFIT P +
Sbjct: 940 RFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES- 999
Query: 1244 RGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWAQLYMSEIVRLHGVPVSIVSDRDAHFTS- 1303
G+ ++VVVDR +K A VP + T + A+++ ++ G P I++D D FTS
Sbjct: 1000 SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQ 1059
Query: 1304 ---------NF-------------GRV------------CRLLWARGSWDFHLHLMEFAY 1314
NF G+ C +W H+ L++ +Y
Sbjct: 1060 TWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSY 1119
BLAST of IVF0003789 vs. ExPASy Swiss-Prot
Match:
P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)
HSP 1 Score: 276.2 bits (705), Expect = 2.0e-72
Identity = 214/865 (24.74%), Postives = 369/865 (42.66%), Query Frame = 0
Query: 644 VEFAIELESGTVPIFRAPYRMAPVELKELKVQLQKVFDKGFIRPSVSPWGAPVLFVKKKD 703
+EF +EL + Y + P +++ + ++ + G IR S + PV+FV KK+
Sbjct: 400 LEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKE 459
Query: 704 GSMRLCIDYRDLNKVTVKNRYPLSRIDDFFDQLQGATVFSKIDFRSGYHQLRIKDGDVPK 763
G++R+ +DY+ LNK N YPL I+ ++QG+T+F+K+D +S YH +R++ GD K
Sbjct: 460 GTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHK 519
Query: 764 TAFRSRYEHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHE 823
AFR +E++VM +G++ AP F +N + E ++ V+ ++DDILI+ K+E+EH
Sbjct: 520 LAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHV 579
Query: 824 EHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEALTSWTRPSTV 883
+H++ VLQ L++ L +KCEF QV F+G+ +S+ G + I+ + W +P
Sbjct: 580 KHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNR 639
Query: 884 SKVRSFLGLAGYYRRFVENFSCIATPLPQLTRKGAPFVWS----------KACKAN---- 943
++R FLG Y R+F+ S + PL L +K + W+ K C +
Sbjct: 640 KELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVL 699
Query: 944 ------------------VVADALSRK--------VSHSAALITRQAPLHRDLERAEIAV 1003
V LS+K V + +A +++ + ++ +A+
Sbjct: 700 RHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAI 759
Query: 1004 --------------------------LVGAVTMQ-------------------------- 1063
L+G +T +
Sbjct: 760 IKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRP 819
Query: 1064 -------------------------------LAQLTVQSTLRQRIIDAQSNDLSLV---- 1123
+ Q+++ + +++ +ND L+
Sbjct: 820 GSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLN 879
Query: 1124 -EKRGLAEAAQA-----------------------------VEFSISSDGSTKMYQDLKR 1183
E + + E Q E + G + + R
Sbjct: 880 NEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILR 939
Query: 1184 VYWWRNMKREVAEFVSKCLVCQLVKAPRQKPAGLLQPLSIPEWKWENVSMDFITRQPRTL 1243
+ W+ +++++ E+V C CQ+ K+ KP G LQP+ E WE++SMDFIT P +
Sbjct: 940 RFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES- 999
Query: 1244 RGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWAQLYMSEIVRLHGVPVSIVSDRDAHFTS- 1303
G+ ++VVVDR +K A VP + T + A+++ ++ G P I++D D FTS
Sbjct: 1000 SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQ 1059
Query: 1304 ---------NF-------------GRV------------CRLLWARGSWDFHLHLMEFAY 1314
NF G+ C +W H+ L++ +Y
Sbjct: 1060 TWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSY 1119
BLAST of IVF0003789 vs. ExPASy Swiss-Prot
Match:
P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)
HSP 1 Score: 276.2 bits (705), Expect = 2.0e-72
Identity = 214/865 (24.74%), Postives = 369/865 (42.66%), Query Frame = 0
Query: 644 VEFAIELESGTVPIFRAPYRMAPVELKELKVQLQKVFDKGFIRPSVSPWGAPVLFVKKKD 703
+EF +EL + Y + P +++ + ++ + G IR S + PV+FV KK+
Sbjct: 400 LEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKE 459
Query: 704 GSMRLCIDYRDLNKVTVKNRYPLSRIDDFFDQLQGATVFSKIDFRSGYHQLRIKDGDVPK 763
G++R+ +DY+ LNK N YPL I+ ++QG+T+F+K+D +S YH +R++ GD K
Sbjct: 460 GTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHK 519
Query: 764 TAFRSRYEHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHE 823
AFR +E++VM +G++ AP F +N + E ++ V+ ++DDILI+ K+E+EH
Sbjct: 520 LAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHV 579
Query: 824 EHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEALTSWTRPSTV 883
+H++ VLQ L++ L +KCEF QV F+G+ +S+ G + I+ + W +P
Sbjct: 580 KHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNR 639
Query: 884 SKVRSFLGLAGYYRRFVENFSCIATPLPQLTRKGAPFVWS----------KACKAN---- 943
++R FLG Y R+F+ S + PL L +K + W+ K C +
Sbjct: 640 KELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVL 699
Query: 944 ------------------VVADALSRK--------VSHSAALITRQAPLHRDLERAEIAV 1003
V LS+K V + +A +++ + ++ +A+
Sbjct: 700 RHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAI 759
Query: 1004 --------------------------LVGAVTMQ-------------------------- 1063
L+G +T +
Sbjct: 760 IKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRP 819
Query: 1064 -------------------------------LAQLTVQSTLRQRIIDAQSNDLSLV---- 1123
+ Q+++ + +++ +ND L+
Sbjct: 820 GSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLN 879
Query: 1124 -EKRGLAEAAQA-----------------------------VEFSISSDGSTKMYQDLKR 1183
E + + E Q E + G + + R
Sbjct: 880 NEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILR 939
Query: 1184 VYWWRNMKREVAEFVSKCLVCQLVKAPRQKPAGLLQPLSIPEWKWENVSMDFITRQPRTL 1243
+ W+ +++++ E+V C CQ+ K+ KP G LQP+ E WE++SMDFIT P +
Sbjct: 940 RFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES- 999
Query: 1244 RGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWAQLYMSEIVRLHGVPVSIVSDRDAHFTS- 1303
G+ ++VVVDR +K A VP + T + A+++ ++ G P I++D D FTS
Sbjct: 1000 SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQ 1059
Query: 1304 ---------NF-------------GRV------------CRLLWARGSWDFHLHLMEFAY 1314
NF G+ C +W H+ L++ +Y
Sbjct: 1060 TWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSY 1119
BLAST of IVF0003789 vs. ExPASy Swiss-Prot
Match:
P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)
HSP 1 Score: 276.2 bits (705), Expect = 2.0e-72
Identity = 214/865 (24.74%), Postives = 369/865 (42.66%), Query Frame = 0
Query: 644 VEFAIELESGTVPIFRAPYRMAPVELKELKVQLQKVFDKGFIRPSVSPWGAPVLFVKKKD 703
+EF +EL + Y + P +++ + ++ + G IR S + PV+FV KK+
Sbjct: 400 LEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKE 459
Query: 704 GSMRLCIDYRDLNKVTVKNRYPLSRIDDFFDQLQGATVFSKIDFRSGYHQLRIKDGDVPK 763
G++R+ +DY+ LNK N YPL I+ ++QG+T+F+K+D +S YH +R++ GD K
Sbjct: 460 GTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHK 519
Query: 764 TAFRSRYEHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHE 823
AFR +E++VM +G++ AP F +N + E ++ V+ ++DDILI+ K+E+EH
Sbjct: 520 LAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHV 579
Query: 824 EHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEALTSWTRPSTV 883
+H++ VLQ L++ L +KCEF QV F+G+ +S+ G + I+ + W +P
Sbjct: 580 KHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNR 639
Query: 884 SKVRSFLGLAGYYRRFVENFSCIATPLPQLTRKGAPFVWS----------KACKAN---- 943
++R FLG Y R+F+ S + PL L +K + W+ K C +
Sbjct: 640 KELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVL 699
Query: 944 ------------------VVADALSRK--------VSHSAALITRQAPLHRDLERAEIAV 1003
V LS+K V + +A +++ + ++ +A+
Sbjct: 700 RHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAI 759
Query: 1004 --------------------------LVGAVTMQ-------------------------- 1063
L+G +T +
Sbjct: 760 IKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRP 819
Query: 1064 -------------------------------LAQLTVQSTLRQRIIDAQSNDLSLV---- 1123
+ Q+++ + +++ +ND L+
Sbjct: 820 GSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLN 879
Query: 1124 -EKRGLAEAAQA-----------------------------VEFSISSDGSTKMYQDLKR 1183
E + + E Q E + G + + R
Sbjct: 880 NEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILR 939
Query: 1184 VYWWRNMKREVAEFVSKCLVCQLVKAPRQKPAGLLQPLSIPEWKWENVSMDFITRQPRTL 1243
+ W+ +++++ E+V C CQ+ K+ KP G LQP+ E WE++SMDFIT P +
Sbjct: 940 RFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPES- 999
Query: 1244 RGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWAQLYMSEIVRLHGVPVSIVSDRDAHFTS- 1303
G+ ++VVVDR +K A VP + T + A+++ ++ G P I++D D FTS
Sbjct: 1000 SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQ 1059
Query: 1304 ---------NF-------------GRV------------CRLLWARGSWDFHLHLMEFAY 1314
NF G+ C +W H+ L++ +Y
Sbjct: 1060 TWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSY 1119
BLAST of IVF0003789 vs. ExPASy TrEMBL
Match:
A0A5A7V8L8 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold679G00080 PE=4 SV=1)
HSP 1 Score: 2047.7 bits (5304), Expect = 0.0e+00
Identity = 1103/1470 (75.03%), Postives = 1137/1470 (77.35%), Query Frame = 0
Query: 131 QVRVQRGAYRREAGRMREGHMDASGFLYASADGSLVVVREMPPRRGARRGGRGGRGRGAG 190
+VR QRGA RREAGR REGHMDASGFL ASA EMPPRRGARRGGRGGRGRGAG
Sbjct: 73 RVRAQRGADRREAGRTREGHMDASGFLIASA-------MEMPPRRGARRGGRGGRGRGAG 132
Query: 191 RVQPEVQPVAHATDPNAP----------------------QQ--------PAP-PAPAPA 250
RVQ EVQPVA A DP AP QQ PAP PAPAPA
Sbjct: 133 RVQLEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPA 192
Query: 251 PVPALVVPQIVPDQLSAEARHLRDFRNYNPSTFDGSLEDATRAQLWLSSLKTIFRYMKCP 310
P PA V PQ VPDQLSAEA+HLRDFR YNP+TFDGSLED TRAQ+WLSSL+TIFRYMKCP
Sbjct: 193 PAPAPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCP 252
Query: 311 KDQKVQCAVFMLTDRGTAWWETTERMLEGDEFLNLEQGDMTVEQYDAEFDMLSRFTSEMI 370
++QKVQCAVFMLTDRGTAWWETTERML GDEFLNLEQGDMTVEQYDAEFDMLSRF EMI
Sbjct: 253 ENQKVQCAVFMLTDRGTAWWETTERMLGGDEFLNLEQGDMTVEQYDAEFDMLSRFAPEMI 312
Query: 371 AIETARADKFVRGLRLDIQGLVRAFRPATHVDALRLAVDLSLQEKANSSKVAGRGSTSGQ 430
A E A ADKFVRGLRLDIQGLVRAFRPATH DALRLAVDLSLQE+ANSSK AGRGSTSGQ
Sbjct: 313 ATEAAIADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQ 372
Query: 431 KRKTEQQPIPVPQRNFRPG----------------------------------------- 490
KRK EQQP+PVPQRNFR G
Sbjct: 373 KRKAEQQPVPVPQRNFRSGGEFCRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTC 432
Query: 491 ---------ADRCPMRLTGNAQNQGEGAPHQGKVFATNKTEAERAATVVTGTLPVLGHYA 550
ADRCP+RLTGNAQNQG GAPHQG+VFATNKTEAE+A TVVTGTLPVLGHYA
Sbjct: 433 FKCRQEGHTADRCPLRLTGNAQNQGTGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYA 492
Query: 551 LVLFDSGSSHSFISSVFVLHVRLEVEPLHHVLSVSTPSEECMLAKEKVKACQIEIAGHVI 610
LVLFDSGSSHSFISS FVLH RLEVEPLHHVLSVSTPS ECML+KEKVKACQIEIA HVI
Sbjct: 493 LVLFDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIADHVI 552
Query: 611 EVTLLVLDMLDFDVILGMDWLAANHASIDCSRKEVAFNPPSMASLKFKGEGSRSLPQVIS 670
EVTL+VLDMLDFDVILGMDWL ANHASIDCSRKEV FNPPSMAS + KG GS+SLPQVIS
Sbjct: 553 EVTLIVLDMLDFDVILGMDWLTANHASIDCSRKEVTFNPPSMASFRIKGGGSKSLPQVIS 612
Query: 671 AIRTSKLLSQGTWGILASVVDTREVDVSLSSEPVVGDYPDIFPEELPGLPSHREVEFAIE 730
AIR SKLLSQGTWGIL SVVDTRE DVSLSSEPVV DYPD+FPEELPGLP HREVEFAIE
Sbjct: 613 AIRASKLLSQGTWGILTSVVDTREADVSLSSEPVVRDYPDVFPEELPGLPLHREVEFAIE 672
Query: 731 LESGTVPIFRAPYRMAPVELKELKVQLQKVFDKGFIRPSVSPWGAPVLFVKKKDGSMRLC 790
LE GTVPI RAPYRMAP ELKELKVQLQ++ DKGFIRPSVSPWGAPVLFVKKKDGSMRLC
Sbjct: 673 LEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC 732
Query: 791 IDYRDLNKVTVKNRYPLSRIDDFFDQLQGATVFSKIDFRSGYHQLRIKDGDVPKTAFRSR 850
IDYR+LNKVTVKNRYPL RIDD FDQLQGATVFSKID RSGYHQLRIKD DVPKTAFRSR
Sbjct: 733 IDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSR 792
Query: 851 YEHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRMV 910
Y HYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFVIVFIDDILIY KTEAEHEEHLRMV
Sbjct: 793 YGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMV 852
Query: 911 LQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEALTSWTRPSTVSKVRSF 970
LQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEA+T WTRPST+S+VRSF
Sbjct: 853 LQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTISEVRSF 912
Query: 971 LGLAGYYRRFVENFSCIATPLPQLTRKGAPFVWSKAC----------------------- 1030
LGLAGYYRRFVENFS IATPL QLTRKGAPFVWSKAC
Sbjct: 913 LGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGS 972
Query: 1031 ------------------------------------------------------------ 1090
Sbjct: 973 GSFVIYSDACKKGLGCVLMQQGKVVPYASRQLKSHEQNYPTHDLELAAVRRWLELVKDYD 1032
Query: 1091 --------KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLVGAVTMQLAQLTVQ 1150
KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAV VGAVTMQLAQLTVQ
Sbjct: 1033 CEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQ 1092
Query: 1151 STLRQRIIDAQSNDLSLVEKRGLAEAAQAVEFSISSD----------------------- 1210
TLRQRIIDAQSND LVEKRGLAEA QA EFS+SSD
Sbjct: 1093 PTLRQRIIDAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSDSAVKTELLS 1152
Query: 1211 -----------GSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQLVKAPRQKPAGLLQPL 1270
GSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQ VKAP QKPAGLLQPL
Sbjct: 1153 EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPTQKPAGLLQPL 1212
Query: 1271 SIPEWKWENVSMDFITRQPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWAQLYMSE 1330
SIPEWKWENVSMDFIT PRTLRGF+VIWVVVDRLTKSAHFV GKSTYT SKWAQLYMSE
Sbjct: 1213 SIPEWKWENVSMDFITGLPRTLRGFSVIWVVVDRLTKSAHFVSGKSTYTASKWAQLYMSE 1272
Query: 1331 IVRLHGVPVSIVSDRDAHFTSNFG------------------------------------ 1359
IVRLHGVPVSIVSDRDA FTS F
Sbjct: 1273 IVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDML 1332
BLAST of IVF0003789 vs. ExPASy TrEMBL
Match:
A0A5A7TB42 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold118G00260 PE=4 SV=1)
HSP 1 Score: 2016.1 bits (5222), Expect = 0.0e+00
Identity = 1097/1505 (72.89%), Postives = 1126/1505 (74.82%), Query Frame = 0
Query: 131 QVRVQRGAYRREAGRMREGHMDASGFLYASADGSLVVVREMPPRRGARRGGRGGRGRGAG 190
+VR QRGA RREAGRMREGHM+ASGFL ASAD V EMPPRRGAR RGGRGRGAG
Sbjct: 121 RVRAQRGADRREAGRMREGHMNASGFLTASAD----VFLEMPPRRGAR---RGGRGRGAG 180
Query: 191 RVQPEVQPVAHATDPNAPQQPAPPAPAPAPVPALVVPQIVPDQLSAEARHLRDFRNYNPS 250
RVQPEVQPVA ATDP AP +VPDQLSAEA+HLRDFR YNP+
Sbjct: 181 RVQPEVQPVAKATDPAAP--------------------VVPDQLSAEAKHLRDFRKYNPT 240
Query: 251 TFDGSLEDATRAQLWLSSLKTIFRYMKCPKDQKVQCAVFMLTDRGTAWWETTERMLEGD- 310
TFDGSLED TRAQLWLSSL+TIFRYMKCP+DQKVQCAVFMLTDRGTAWWETTERML GD
Sbjct: 241 TFDGSLEDPTRAQLWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDV 300
Query: 311 ---------------------------EFLNLEQGDMTVEQYDAEFDMLSRFTSEMIAIE 370
EFLNLEQGDMTVEQYDAEFDMLS F EMIA E
Sbjct: 301 SQIMWQQFKESFYSKFFSASLRDAERQEFLNLEQGDMTVEQYDAEFDMLSHFAPEMIATE 360
Query: 371 TARADKFVRGLRLDIQGLVRAFRPATHVDALRLAVDLSLQEKANSSKVAGRGSTSGQKRK 430
ARADKFVRGLRLDIQGLVRAFRPATH DALRLAVDLSLQE+ANSSK AGRGSTSGQKRK
Sbjct: 361 AARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRK 420
Query: 431 TEQQPIPVPQRNFRP--------------------------------------------- 490
EQQP+PVPQRNFR
Sbjct: 421 AEQQPVPVPQRNFRSCGEFRRFQQKPFEVGEAARGKPLCTTCGKHHLGRCLFGTRTCFKC 480
Query: 491 -----GADRCPMRLTGNAQNQGEGAPHQGKVFATNKTEAERAATVVTGTLPVLGHYALVL 550
ADRCP+RLTGNAQNQG GAPHQG+VFATNKTEAERA TVVTGTLPVLGHYALVL
Sbjct: 481 RQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTVVTGTLPVLGHYALVL 540
Query: 551 FDSGSSHSFISSVFVLHVRLEVEPLHHVLSVSTPSEECMLAKEKVKACQIEIAGHVIEVT 610
FDSGSSHSFISS FVLH RLEVEPLHHVLSVSTPS ECML+KEKVKACQIEIA HVIEVT
Sbjct: 541 FDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSRECMLSKEKVKACQIEIADHVIEVT 600
Query: 611 LLVLDMLDFDVILGMDWLAANHASIDCSRKEVAFNPPSMASLKFKGEGSRSLPQVISAIR 670
LLVLDMLDFDVILGMDWLAANHASIDCSRKEV FNPPSMAS KFKG GSRSLPQVISAIR
Sbjct: 601 LLVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIR 660
Query: 671 TSKLLSQGTWGILASVVDTREVDVSLSSEPVVGDYPDIFPEELPGLPSHREVEFAIELES 730
SKLLSQGTWGILASVVDTREVDVSLSSEPVV DYPD+FPEELPGLP HREVEFAIELE
Sbjct: 661 ASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEP 720
Query: 731 GTVPIFRAPYRMAPVELKELKVQLQKVFDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDY 790
GTVPI RAPYRMAP ELKELKVQLQ++ DKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDY
Sbjct: 721 GTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDY 780
Query: 791 RDLNKVTVKNRYPLSRIDDFFDQLQGATVFSKIDFRSGYHQLRIKDGDVPKTAFRSRYEH 850
R+LNKVTVKNRYPL RIDD FDQLQGATVFSKID RSGYHQLRIKDGDVPKTAFRSRY H
Sbjct: 781 RELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGH 840
Query: 851 YEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRMVLQT 910
YEFIVMSFGLTNAP VFMDLMNRVF+EFLDTFVIVFIDDILIY K EAEHEEHLR+VLQT
Sbjct: 841 YEFIVMSFGLTNAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKMEAEHEEHLRIVLQT 900
Query: 911 LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEALTSWTRPSTVSKVRSFLGL 970
LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEA+T WTRPSTVS+VRSFLGL
Sbjct: 901 LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGL 960
Query: 971 AGYYRRFVENFSCIATPLPQLTRKGAPFVWSKAC-------------------------- 1030
AGYYRRFVENFS IATPL QLTRKGAPFVWSKAC
Sbjct: 961 AGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF 1020
Query: 1031 ------------------------------------------------------------ 1090
Sbjct: 1021 VIYSDASKKGLGFVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVIFALKIWRHYLYGE 1080
Query: 1091 -------------------------------------------KANVVADALSRKVSHSA 1150
KANVVADALSRKVSHSA
Sbjct: 1081 KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSA 1140
Query: 1151 ALITRQAPLHRDLERAEIAVLVGAVTMQLAQLTVQSTLRQRIIDAQSNDLSLVEKRGLAE 1210
ALITR APLHRDLERAEIAV VGA+TMQLAQLTVQ TLRQRII AQSND LVEKRGLAE
Sbjct: 1141 ALITRHAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAE 1200
Query: 1211 AAQAVEFSISSD----------------------------------GSTKMYQDLKRVYW 1270
A QA FSISSD GSTKMYQDLKRVYW
Sbjct: 1201 AGQAEGFSISSDGGLVFERRLCVPSDSAIKIELLSEAHSSPFFMHPGSTKMYQDLKRVYW 1260
Query: 1271 WRNMKREVAEFVSKCLVCQLVKAPRQKPAGLLQPLSIPEWKWENVSMDFITRQPRTLRGF 1330
WRNMKREVAEFVS+CLVCQ VKAPRQKPAGLLQPLSIPEWKWENVSMDFIT PRTLRGF
Sbjct: 1261 WRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF 1320
Query: 1331 TVIWVVVDRLTKSAHFVPGKSTYTTSKWAQLYMSEIVRLHGVPVSIVSDRDAHFTSNFG- 1359
TVIWVVVDRLTKSAHFVPGKSTY SKWAQLYMSEIVRLHGVPVSIVSDRDA FTS F
Sbjct: 1321 TVIWVVVDRLTKSAHFVPGKSTYIASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSQFWK 1380
BLAST of IVF0003789 vs. ExPASy TrEMBL
Match:
A0A5A7V810 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold329G002410 PE=4 SV=1)
HSP 1 Score: 1982.6 bits (5135), Expect = 0.0e+00
Identity = 1083/1471 (73.62%), Postives = 1113/1471 (75.66%), Query Frame = 0
Query: 126 GITKY--QVRVQRGAYRREAGRMREGHMDASGFLYASADGSLVVVREMPPRRGARRGGRG 185
GIT+ +VRVQRGA RREAGRMREGHMDASGFLY EMPPRRGARRGGRG
Sbjct: 462 GITRLLCRVRVQRGADRREAGRMREGHMDASGFLYG----------EMPPRRGARRGGRG 521
Query: 186 GRGRGAGRVQPEVQPVAHATDPNAP-----------------------QQPAPPAPAPAP 245
GRGRGAGRVQPEVQPVA ATDP AP QQPAPPAP PAP
Sbjct: 522 GRGRGAGRVQPEVQPVAQATDPAAPVTHADLAAMEQRFRDLIMQMREQQQPAPPAPVPAP 581
Query: 246 VPALVVPQIVPDQLSAEARHLRDFRNYNPSTFDGSLEDATRAQLWLSSLKTIFRYMKCPK 305
VP VVPQ+ DQLSAEA+HLRDFR YNP+TFDGSLED TRAQLWL SL+TIFRYMKCP+
Sbjct: 582 VP--VVPQVASDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQLWLLSLETIFRYMKCPE 641
Query: 306 DQKVQCAVFMLTDRGTAWWETTERMLEGDEFLNLEQGDMTVEQYDAEFDMLSRFTSEMIA 365
DQKVQCAVFMLTDRGTA R + EFLNLEQGDMTVEQYDAEFDMLSRF EMIA
Sbjct: 642 DQKVQCAVFMLTDRGTA----CLRDAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIA 701
Query: 366 IETARADKFVRGLRLDIQGLVRAFRPATHVDALRLAVDLSLQEKANSSKVAGRGSTSGQK 425
E ARADKFVRGLRLDIQGLVRAFRPATH DALRLAVDLSLQE+ANSSKVAGRGSTSGQK
Sbjct: 702 TEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKVAGRGSTSGQK 761
Query: 426 RKTEQQPIPVPQRNFRPG------------------------------------------ 485
RK EQQP PVPQRNFRPG
Sbjct: 762 RKAEQQPTPVPQRNFRPGGEFRRFQQKPFEAGEAARGKPLCATCGKHHLGRCLFGTRTCF 821
Query: 486 --------ADRCPMRLTGNAQNQGEGAPHQGKVFATNKTEAERAATVVTGTLPVLGHYAL 545
ADRCPMRLTGNAQNQ GAPHQGKVFATNKTEAERA TVVTGTLPVLGHYAL
Sbjct: 822 KCRQEGHTADRCPMRLTGNAQNQEAGAPHQGKVFATNKTEAERAGTVVTGTLPVLGHYAL 881
Query: 546 VLFDSGSSHSFISSVFVLHVRLEVEPLHHVLSVSTPSEECMLAKEKVKACQIEIAGHVIE 605
VLFDSGSSHSFISS FVLH RLE EKVKACQIEIAGH IE
Sbjct: 882 VLFDSGSSHSFISSAFVLHARLE---------------------EKVKACQIEIAGHGIE 941
Query: 606 VTLLVLDMLDFDVILGMDWLAANHASIDCSRKEVAFNPPSMASLKFKGEGSRSLPQVISA 665
VTLLVLDMLDFDVILGMDWLAANHASIDCSRKEVAFNPPSMAS KFKGEGSRSLPQVISA
Sbjct: 942 VTLLVLDMLDFDVILGMDWLAANHASIDCSRKEVAFNPPSMASFKFKGEGSRSLPQVISA 1001
Query: 666 IRTSKLLSQGTWGILASVVDTREVDVSLSSEPVVGDYPDIFPEELPGLPSHREVEFAIEL 725
IR SKLLSQG WGILASVVDTREVDVSLSSEPVV DYPD+FPE+LPGLP HREVEFAIEL
Sbjct: 1002 IRASKLLSQGIWGILASVVDTREVDVSLSSEPVVRDYPDVFPEDLPGLPPHREVEFAIEL 1061
Query: 726 ESGTVPIFRAPYRMAPVELKELKVQLQKVFDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 785
E GTVPI RAPYRMAP ELKELKVQLQ++ DKGFIRPSVSPWGAPVLFVKKKDGSMRLCI
Sbjct: 1062 EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 1121
Query: 786 DYRDLNKVTVKNRYPLSRIDDFFDQLQGATVFSKIDFRSGYHQLRIKDGDVPKTAFRSRY 845
DYR+LNKVTVKNRYPL RIDD FDQLQGATVF KID RSGYHQLRIKDGDVPKTAFRS+Y
Sbjct: 1122 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFFKIDLRSGYHQLRIKDGDVPKTAFRSKY 1181
Query: 846 EHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRMVL 905
HYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFVIVFIDDILIY KTEAEHEEHLR+VL
Sbjct: 1182 GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVL 1241
Query: 906 QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEALTSWTRPSTVSKVRSFL 965
QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGV VDPAKIEA+T WTRPSTVS+VRSFL
Sbjct: 1242 QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVYVDPAKIEAVTGWTRPSTVSEVRSFL 1301
Query: 966 GLAGYYRRFVENFSCIATPLPQLTRKGAPFVWSKAC------------------------ 1025
GLAGYYRRFVENFS IATPL QLTRK APFVWSK C
Sbjct: 1302 GLAGYYRRFVENFSRIATPLTQLTRKEAPFVWSKVCEDSFQNLKQKLVTAPVLTVPDGSG 1361
Query: 1026 ------------------------------------------------------------ 1085
Sbjct: 1362 SFVIYSDASKKGLSCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY 1421
Query: 1086 ---------------------------------------------KANVVADALSRKVSH 1145
KANVVADALSRKVSH
Sbjct: 1422 GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSH 1481
Query: 1146 SAALITRQAPLHRDLERAEIAVLVGAVTMQLAQLTVQSTLRQRIIDAQSNDLSLVEKRGL 1205
SAALITRQAPLHRDLERAEIAV VGAVT+QLAQLTVQSTLRQRIIDAQSND L EKRGL
Sbjct: 1482 SAALITRQAPLHRDLERAEIAVSVGAVTIQLAQLTVQSTLRQRIIDAQSNDPYLAEKRGL 1541
Query: 1206 AEAAQAVEFSISSD----------------------------------GSTKMYQDLKRV 1265
AEA QA EFSISSD GSTKMYQDLKRV
Sbjct: 1542 AEAGQATEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRV 1601
Query: 1266 YWWRNMKREVAEFVSKCLVCQLVKAPRQKPAGLLQPLSIPEWKWENVSMDFITRQPRTLR 1325
YWWRNMKREVAEFVS+CLVCQ VKAP+QKPAGLLQPLSIPEWKWENVSMDFIT PRTLR
Sbjct: 1602 YWWRNMKREVAEFVSRCLVCQQVKAPKQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLR 1661
Query: 1326 GFTVIWVVVDRLTKSAHFVPGKSTYTTSKWAQLYMSEIVRLHGVPVSIVSDRDAHFTSNF 1359
GFTVIWVVVDRLTKSAHFVPGKSTYT SKWAQLYMSEIVRLHGVPV IVSDRDA FTS F
Sbjct: 1662 GFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVLIVSDRDARFTSKF 1721
BLAST of IVF0003789 vs. ExPASy TrEMBL
Match:
A0A5A7UAA8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00800 PE=4 SV=1)
HSP 1 Score: 1970.7 bits (5104), Expect = 0.0e+00
Identity = 1068/1468 (72.75%), Postives = 1102/1468 (75.07%), Query Frame = 0
Query: 171 MPPRRGARRGGRGGRGRGAGRVQPEVQPVAHATDPNAPQQPAP-PAPAPAPVPAL--VVP 230
MPPRRGARRGGRGGRGRGAGRVQPE P PAP PAP PAP PAL V P
Sbjct: 1 MPPRRGARRGGRGGRGRGAGRVQPE-----KPASPTPAPAPAPAPAPVPAPAPALVPVAP 60
Query: 231 QIVPDQLSAEARHLRDFRNYNPSTFDGSLEDATRAQLWLSSLKTIFRYMKCPKDQKVQCA 290
Q VPDQLSAEA+HLRDFR YNP+TFDGSLED TRAQ+WLSSL+TIFRYMKCP+DQKVQCA
Sbjct: 61 QFVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCA 120
Query: 291 VFMLTDRGTAWWETTERMLEGD----------------------------EFLNLEQGDM 350
VFMLTDRGTAWWETTERML GD EFLNLEQGDM
Sbjct: 121 VFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDM 180
Query: 351 TVEQYDAEFDMLSRFTSEMIAIETARADKFVRGLRLDIQGLVRAFRPATHVDALRLAVDL 410
TVEQYDAEFDMLSRF EMIA E ARADKFVRGLRLDIQGLVRAFRPATH DALRLAVDL
Sbjct: 181 TVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDL 240
Query: 411 SLQEKANSSKVAGRGSTSGQKRKTEQQPIPVPQRNFRPG--------------------- 470
SLQE ANSSK AGRGSTSGQKRK EQQP+PVPQRNFR G
Sbjct: 241 SLQEMANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRSGGEFRSFQQKPFEAGEAARGKP 300
Query: 471 -----------------------------ADRCPMRLTGNAQNQGEGAPHQGKVFATNKT 530
ADRCP+RLTG AQNQG GAPHQG+VFATN+T
Sbjct: 301 LCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRT 360
Query: 531 EAERAATVVTGTLPVLGHYALVLFDSGSSHSFISSVFVLHVRLEVEPLHHVLSVSTPSEE 590
EAE+A TVVTGTLPVLGHYALVLFDSGSSHSFISS FV H RLEVEPLHHVLSVSTPS E
Sbjct: 361 EAEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSAFVSHARLEVEPLHHVLSVSTPSGE 420
Query: 591 CMLAKEKVKACQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHASIDCSRKEVAFNPP 650
CML++EKVKACQIEIAGHVIEVTL+VLDMLDFDVILGMDWLAANHASIDCSRK+V FNPP
Sbjct: 421 CMLSREKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKDVTFNPP 480
Query: 651 SMASLKFKGEGSRSLPQVISAIRTSKLLSQGTWGILASVVDTREVDVSLSSEPVVGDYPD 710
SMAS KFKG GS+SLPQVISAIR SKLLSQGTWGILASVVDTRE DVSLSSEPVV DYPD
Sbjct: 481 SMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPD 540
Query: 711 IFPEELPGLPSHREVEFAIELESGTVPIFRAPYRMAPVELKELKVQLQKVFDKGFIRPSV 770
+FPEELPGLP HREVEFAIELE GTVPI RAPYRMAP ELKELKVQLQ++ DKGFIRP+V
Sbjct: 541 VFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPNV 600
Query: 771 SPWGAPVLFVKKKDGSMRLCIDYRDLNKVTVKNRYPLSRIDDFFDQLQGATVFSKIDFRS 830
SPWGAPVLFVKKKDGSMRLCIDYR+LNKVTVKNRYPL RIDD FDQLQGATVFSKID RS
Sbjct: 601 SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS 660
Query: 831 GYHQLRIKDGDVPKTAFRSRYEHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFI 890
GY+QLRIKD DVPKTAFRSRY HYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFVIVFI
Sbjct: 661 GYNQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFI 720
Query: 891 DDILIYFKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPA 950
DDILIY KTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKA VSVDPA
Sbjct: 721 DDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPA 780
Query: 951 KIEALTSWTRPSTVSKVRSFLGLAGYYRRFVENFSCIATPLPQLTRKGAPFVWSKAC--- 1010
KIEA+T WTRPSTVS+VRSFLGLAGYYRRFVENFS IATPL QLTRKGAPFVWSKAC
Sbjct: 781 KIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDS 840
Query: 1011 ------------------------------------------------------------ 1070
Sbjct: 841 FQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYP 900
Query: 1071 ------------------------------------------------------------ 1130
Sbjct: 901 THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCE 960
Query: 1131 ------KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLVGAVTMQLAQLTVQST 1190
KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAV VGAVTMQLAQLTVQ T
Sbjct: 961 ILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPT 1020
Query: 1191 LRQRIIDAQSNDLSLVEKRGLAEAAQAVEFSISSD------------------------- 1250
LRQRIIDAQSND LVEKRGLAEA QAVEFS+SSD
Sbjct: 1021 LRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLSFEGRLCVPSDSAVKTELLFEA 1080
Query: 1251 ---------GSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQLVKAPRQKPAGLLQPLSI 1310
GSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQ VK PRQKPAGLLQPLSI
Sbjct: 1081 HSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKEPRQKPAGLLQPLSI 1140
Query: 1311 PEWKWENVSMDFITRQPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWAQLYMSEIV 1359
PEWKWENVSMDFIT PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYT SKWAQLYMSEIV
Sbjct: 1141 PEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV 1200
BLAST of IVF0003789 vs. ExPASy TrEMBL
Match:
A0A5A7UD41 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold578G001190 PE=4 SV=1)
HSP 1 Score: 1968.7 bits (5099), Expect = 0.0e+00
Identity = 1077/1480 (72.77%), Postives = 1112/1480 (75.14%), Query Frame = 0
Query: 106 LFGDSFPFLGWIRCEWTRTRGITKYQVRVQRGAYRREAGRMREGHMDASGFLYASADGSL 165
L G SF I + TR + + VRVQRGA RREAGRMREGHMDASGFLYASAD
Sbjct: 195 LIGVSFGITRLICAFYGTTRLLCR--VRVQRGANRREAGRMREGHMDASGFLYASAD--- 254
Query: 166 VVVREMPPRRGARRGGRGGRGRGAGRVQPEVQPVAHATDPNAPQQPAPPAPAPAPVPALV 225
V EMPPRRGARRGGRGGRGRGA RVQPEVQPVA ATDP AP
Sbjct: 255 -VFWEMPPRRGARRGGRGGRGRGAERVQPEVQPVAQATDPAAP----------------- 314
Query: 226 VPQIVPDQLSAEARHLRDFRNYNPSTFDGSLEDATRAQLWLSSLKTIFRYMKCPKDQKVQ 285
+VPDQLSAEA+ LRDFR YNP+TFDGSLED TRAQLWLSSL+TIFRYMKCP+DQKVQ
Sbjct: 315 ---VVPDQLSAEAKLLRDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPEDQKVQ 374
Query: 286 CAVFMLTDRGTAWWETTERMLEGD----------------------------EFLNLEQG 345
CAVFMLTDRGTAWWETTERML GD +FLNLEQG
Sbjct: 375 CAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQKFLNLEQG 434
Query: 346 DMTVEQYDAEFDMLSRFTSEMIAIETARADKFVRGLRLDIQGLVRAFRPATHVDALRLAV 405
DMTVEQYDAEFDMLSRF EMIA E ARADKFVRGLRLDIQGLVRAFRPATH DALRLAV
Sbjct: 435 DMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAV 494
Query: 406 DLSLQEKANSSKVAGRGSTSGQKRKTEQQPIPVPQRNFRPGADRCPMRLTGNAQNQGEGA 465
DLSLQE+ANSSK AGRGSTSGQKRKTEQQP+ VPQRNFR GA
Sbjct: 495 DLSLQERANSSKAAGRGSTSGQKRKTEQQPVLVPQRNFR------------------SGA 554
Query: 466 PHQGKVFATNKTEAERAATVVTGTLPVLGHYALVLFDSGSSHSFISSVFVLHVRLEVEPL 525
PHQGKVFATNKTEAER TVV GTLPVLGHYALVLFDSGSSHSFIS FVLH RLEVEPL
Sbjct: 555 PHQGKVFATNKTEAERVGTVVIGTLPVLGHYALVLFDSGSSHSFISFAFVLHARLEVEPL 614
Query: 526 HHVLSVSTPSEECMLAKEKVKACQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHASI 585
H+VLSVSTPS ECML+KEKVK CQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAA HASI
Sbjct: 615 HNVLSVSTPSGECMLSKEKVKTCQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAAKHASI 674
Query: 586 DCSRKEVAFNPPSMASLKFKGEGSRSLPQVISAIRTSKLLSQGTWGILASVVDTREVDVS 645
DCS KEVAFNPPSMAS KFKGEGSRSLPQVIS IR SKLLSQGTWGILASVVDTREVDVS
Sbjct: 675 DCSCKEVAFNPPSMASFKFKGEGSRSLPQVISTIRASKLLSQGTWGILASVVDTREVDVS 734
Query: 646 LSSEPVVGDYPDIFPEELPGLPSHREVEFAIELESGTVPIFRAPYRMAPVELKELKVQLQ 705
LSSEPVV DYPD+FPEELPGLP HREVEFAIELE GTVPI RAPYRMAP ELKELKVQLQ
Sbjct: 735 LSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQ 794
Query: 706 KVFDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRDLNKVTVKNRYPLSRIDDFFDQLQ 765
++ DKGFIRPSVSPWGAPVLFVKKKDGSMRL IDYR+LNKVTVKNRYPL RIDD FDQLQ
Sbjct: 795 ELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLYIDYRELNKVTVKNRYPLPRIDDLFDQLQ 854
Query: 766 GATVFSKIDFRSGYHQLRIKDGDVPKTAFRSRYEHYEFIVMSFGLTNAPTVFMDLMNRVF 825
GATVFSKI+ RSGYHQLRIKDGDVPK AFRSRY +YEFIVMSFGLTNAP VFMDLMNRVF
Sbjct: 855 GATVFSKINLRSGYHQLRIKDGDVPKIAFRSRYGYYEFIVMSFGLTNAPAVFMDLMNRVF 914
Query: 826 REFLDTFVIVFIDDILIYFKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGH 885
REFLDTFVIVFID+ILIY KTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGH
Sbjct: 915 REFLDTFVIVFIDNILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGH 974
Query: 886 VVSKAGVSVDPAKIEALTSWTRPSTVSKVRSFLGLAGYYRRFVENFSCIATPLPQLTRKG 945
VVSKAGVSVDPAKIEA+T WTRPSTV VRSFLGLAGYYRRFVENFS IATPL QLTRKG
Sbjct: 975 VVSKAGVSVDPAKIEAVTGWTRPSTVKVVRSFLGLAGYYRRFVENFSRIATPLTQLTRKG 1034
Query: 946 APFVWSKAC--------------------------------------------------- 1005
APFVWSK C
Sbjct: 1035 APFVWSKTCEDSFQNLKQKLVIAPVLTVPDGSGSFLIYSDASKKGLGCVLMQQGKVVAYA 1094
Query: 1006 ------------------------------------------------------------ 1065
Sbjct: 1095 SRQLKRHKQNYPTHDLELAAVVFPLKIWRHYLYGERIQIFTDHKSLKYFFTQKELNMRHR 1154
Query: 1066 ------------------KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLVGAV 1125
KANVVADALSRKVSHSAALITRQAPL RDLERAEIAV VGAV
Sbjct: 1155 RWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLLRDLERAEIAVSVGAV 1214
Query: 1126 TMQLAQLTVQSTLRQRIIDAQSNDLSLVEKRGLAEAAQAVEFSISSD------------- 1185
T+QLAQLTVQSTLR+RIIDAQSND LVEKRGLAEA Q VEFSISSD
Sbjct: 1215 TIQLAQLTVQSTLRERIIDAQSNDPYLVEKRGLAEAGQVVEFSISSDGGLLFERRLCVPS 1274
Query: 1186 ---------------------GSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQLVKAPR 1245
GSTKMYQDLKRVYWWRNMKREVAEFVS+CLVCQ VKAPR
Sbjct: 1275 DSAVKTELLCEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPR 1334
Query: 1246 QKPAGLLQPLSIPEWKWENVSMDFITRQPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTT 1305
QKPAGLLQPLSIPEWKWENVSM FIT PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYT
Sbjct: 1335 QKPAGLLQPLSIPEWKWENVSMFFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTA 1394
Query: 1306 SKWAQLYMSEIVRLHGVPVSIVSDRDAHFTSNFG-------------------------- 1359
SKWAQLYMSEIVRLHGVPVSIVSDRDA F F
Sbjct: 1395 SKWAQLYMSEIVRLHGVPVSIVSDRDARFIFKFWKGLQTAMGMRLDFSTTFHPQTDGQTE 1454
BLAST of IVF0003789 vs. NCBI nr
Match:
KAA0062245.1 (pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 2039 bits (5282), Expect = 0.0
Identity = 1103/1470 (75.03%), Postives = 1137/1470 (77.35%), Query Frame = 0
Query: 131 QVRVQRGAYRREAGRMREGHMDASGFLYASADGSLVVVREMPPRRGARRGGRGGRGRGAG 190
+VR QRGA RREAGR REGHMDASGFL ASA EMPPRRGARRGGRGGRGRGAG
Sbjct: 73 RVRAQRGADRREAGRTREGHMDASGFLIASA-------MEMPPRRGARRGGRGGRGRGAG 132
Query: 191 RVQPEVQPVAHATDPNAP----------------------QQ--------PAP-PAPAPA 250
RVQ EVQPVA A DP AP QQ PAP PAPAPA
Sbjct: 133 RVQLEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPA 192
Query: 251 PVPALVVPQIVPDQLSAEARHLRDFRNYNPSTFDGSLEDATRAQLWLSSLKTIFRYMKCP 310
P PA V PQ VPDQLSAEA+HLRDFR YNP+TFDGSLED TRAQ+WLSSL+TIFRYMKCP
Sbjct: 193 PAPAPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCP 252
Query: 311 KDQKVQCAVFMLTDRGTAWWETTERMLEGDEFLNLEQGDMTVEQYDAEFDMLSRFTSEMI 370
++QKVQCAVFMLTDRGTAWWETTERML GDEFLNLEQGDMTVEQYDAEFDMLSRF EMI
Sbjct: 253 ENQKVQCAVFMLTDRGTAWWETTERMLGGDEFLNLEQGDMTVEQYDAEFDMLSRFAPEMI 312
Query: 371 AIETARADKFVRGLRLDIQGLVRAFRPATHVDALRLAVDLSLQEKANSSKVAGRGSTSGQ 430
A E A ADKFVRGLRLDIQGLVRAFRPATH DALRLAVDLSLQE+ANSSK AGRGSTSGQ
Sbjct: 313 ATEAAIADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQ 372
Query: 431 KRKTEQQPIPVPQRNFRPG----------------------------------------- 490
KRK EQQP+PVPQRNFR G
Sbjct: 373 KRKAEQQPVPVPQRNFRSGGEFCRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTC 432
Query: 491 ---------ADRCPMRLTGNAQNQGEGAPHQGKVFATNKTEAERAATVVTGTLPVLGHYA 550
ADRCP+RLTGNAQNQG GAPHQG+VFATNKTEAE+A TVVTGTLPVLGHYA
Sbjct: 433 FKCRQEGHTADRCPLRLTGNAQNQGTGAPHQGRVFATNKTEAEKAGTVVTGTLPVLGHYA 492
Query: 551 LVLFDSGSSHSFISSVFVLHVRLEVEPLHHVLSVSTPSEECMLAKEKVKACQIEIAGHVI 610
LVLFDSGSSHSFISS FVLH RLEVEPLHHVLSVSTPS ECML+KEKVKACQIEIA HVI
Sbjct: 493 LVLFDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSGECMLSKEKVKACQIEIADHVI 552
Query: 611 EVTLLVLDMLDFDVILGMDWLAANHASIDCSRKEVAFNPPSMASLKFKGEGSRSLPQVIS 670
EVTL+VLDMLDFDVILGMDWL ANHASIDCSRKEV FNPPSMAS + KG GS+SLPQVIS
Sbjct: 553 EVTLIVLDMLDFDVILGMDWLTANHASIDCSRKEVTFNPPSMASFRIKGGGSKSLPQVIS 612
Query: 671 AIRTSKLLSQGTWGILASVVDTREVDVSLSSEPVVGDYPDIFPEELPGLPSHREVEFAIE 730
AIR SKLLSQGTWGIL SVVDTRE DVSLSSEPVV DYPD+FPEELPGLP HREVEFAIE
Sbjct: 613 AIRASKLLSQGTWGILTSVVDTREADVSLSSEPVVRDYPDVFPEELPGLPLHREVEFAIE 672
Query: 731 LESGTVPIFRAPYRMAPVELKELKVQLQKVFDKGFIRPSVSPWGAPVLFVKKKDGSMRLC 790
LE GTVPI RAPYRMAP ELKELKVQLQ++ DKGFIRPSVSPWGAPVLFVKKKDGSMRLC
Sbjct: 673 LEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLC 732
Query: 791 IDYRDLNKVTVKNRYPLSRIDDFFDQLQGATVFSKIDFRSGYHQLRIKDGDVPKTAFRSR 850
IDYR+LNKVTVKNRYPL RIDD FDQLQGATVFSKID RSGYHQLRIKD DVPKTAFRSR
Sbjct: 733 IDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSR 792
Query: 851 YEHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRMV 910
Y HYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFVIVFIDDILIY KTEAEHEEHLRMV
Sbjct: 793 YGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMV 852
Query: 911 LQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEALTSWTRPSTVSKVRSF 970
LQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEA+T WTRPST+S+VRSF
Sbjct: 853 LQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTISEVRSF 912
Query: 971 LGLAGYYRRFVENFSCIATPLPQLTRKGAPFVWSKAC----------------------- 1030
LGLAGYYRRFVENFS IATPL QLTRKGAPFVWSKAC
Sbjct: 913 LGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGS 972
Query: 1031 ------------------------------------------------------------ 1090
Sbjct: 973 GSFVIYSDACKKGLGCVLMQQGKVVPYASRQLKSHEQNYPTHDLELAAVRRWLELVKDYD 1032
Query: 1091 --------KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLVGAVTMQLAQLTVQ 1150
KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAV VGAVTMQLAQLTVQ
Sbjct: 1033 CEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQ 1092
Query: 1151 STLRQRIIDAQSNDLSLVEKRGLAEAAQAVEFSISSDG---------------------- 1210
TLRQRIIDAQSND LVEKRGLAEA QA EFS+SSDG
Sbjct: 1093 PTLRQRIIDAQSNDPYLVEKRGLAEAGQAAEFSLSSDGGLLFERRLCVPSDSAVKTELLS 1152
Query: 1211 ------------STKMYQDLKRVYWWRNMKREVAEFVSKCLVCQLVKAPRQKPAGLLQPL 1270
STKMYQDLKRVYWWRNMKREVAEFVSKCLVCQ VKAP QKPAGLLQPL
Sbjct: 1153 EAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPTQKPAGLLQPL 1212
Query: 1271 SIPEWKWENVSMDFITRQPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWAQLYMSE 1330
SIPEWKWENVSMDFIT PRTLRGF+VIWVVVDRLTKSAHFV GKSTYT SKWAQLYMSE
Sbjct: 1213 SIPEWKWENVSMDFITGLPRTLRGFSVIWVVVDRLTKSAHFVSGKSTYTASKWAQLYMSE 1272
Query: 1331 IVRLHGVPVSIVSDRDAHFTSNFG------------------------------------ 1358
IVRLHGVPVSIVSDRDA FTS F
Sbjct: 1273 IVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDML 1332
BLAST of IVF0003789 vs. NCBI nr
Match:
KAA0040188.1 (pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 2007 bits (5199), Expect = 0.0
Identity = 1097/1505 (72.89%), Postives = 1126/1505 (74.82%), Query Frame = 0
Query: 131 QVRVQRGAYRREAGRMREGHMDASGFLYASADGSLVVVREMPPRRGARRGGRGGRGRGAG 190
+VR QRGA RREAGRMREGHM+ASGFL ASAD V EMPPRRGARRGGRG RGAG
Sbjct: 121 RVRAQRGADRREAGRMREGHMNASGFLTASAD----VFLEMPPRRGARRGGRG---RGAG 180
Query: 191 RVQPEVQPVAHATDPNAPQQPAPPAPAPAPVPALVVPQIVPDQLSAEARHLRDFRNYNPS 250
RVQPEVQPVA ATDP AP +VPDQLSAEA+HLRDFR YNP+
Sbjct: 181 RVQPEVQPVAKATDPAAP--------------------VVPDQLSAEAKHLRDFRKYNPT 240
Query: 251 TFDGSLEDATRAQLWLSSLKTIFRYMKCPKDQKVQCAVFMLTDRGTAWWETTERMLEGD- 310
TFDGSLED TRAQLWLSSL+TIFRYMKCP+DQKVQCAVFMLTDRGTAWWETTERML GD
Sbjct: 241 TFDGSLEDPTRAQLWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDV 300
Query: 311 ---------------------------EFLNLEQGDMTVEQYDAEFDMLSRFTSEMIAIE 370
EFLNLEQGDMTVEQYDAEFDMLS F EMIA E
Sbjct: 301 SQIMWQQFKESFYSKFFSASLRDAERQEFLNLEQGDMTVEQYDAEFDMLSHFAPEMIATE 360
Query: 371 TARADKFVRGLRLDIQGLVRAFRPATHVDALRLAVDLSLQEKANSSKVAGRGSTSGQKRK 430
ARADKFVRGLRLDIQGLVRAFRPATH DALRLAVDLSLQE+ANSSK AGRGSTSGQKRK
Sbjct: 361 AARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRK 420
Query: 431 TEQQPIPVPQRNFRP--------------------------------------------- 490
EQQP+PVPQRNFR
Sbjct: 421 AEQQPVPVPQRNFRSCGEFRRFQQKPFEVGEAARGKPLCTTCGKHHLGRCLFGTRTCFKC 480
Query: 491 -----GADRCPMRLTGNAQNQGEGAPHQGKVFATNKTEAERAATVVTGTLPVLGHYALVL 550
ADRCP+RLTGNAQNQG GAPHQG+VFATNKTEAERA TVVTGTLPVLGHYALVL
Sbjct: 481 RQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAERAGTVVTGTLPVLGHYALVL 540
Query: 551 FDSGSSHSFISSVFVLHVRLEVEPLHHVLSVSTPSEECMLAKEKVKACQIEIAGHVIEVT 610
FDSGSSHSFISS FVLH RLEVEPLHHVLSVSTPS ECML+KEKVKACQIEIA HVIEVT
Sbjct: 541 FDSGSSHSFISSAFVLHARLEVEPLHHVLSVSTPSRECMLSKEKVKACQIEIADHVIEVT 600
Query: 611 LLVLDMLDFDVILGMDWLAANHASIDCSRKEVAFNPPSMASLKFKGEGSRSLPQVISAIR 670
LLVLDMLDFDVILGMDWLAANHASIDCSRKEV FNPPSMAS KFKG GSRSLPQVISAIR
Sbjct: 601 LLVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSRSLPQVISAIR 660
Query: 671 TSKLLSQGTWGILASVVDTREVDVSLSSEPVVGDYPDIFPEELPGLPSHREVEFAIELES 730
SKLLSQGTWGILASVVDTREVDVSLSSEPVV DYPD+FPEELPGLP HREVEFAIELE
Sbjct: 661 ASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEP 720
Query: 731 GTVPIFRAPYRMAPVELKELKVQLQKVFDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDY 790
GTVPI RAPYRMAP ELKELKVQLQ++ DKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDY
Sbjct: 721 GTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDY 780
Query: 791 RDLNKVTVKNRYPLSRIDDFFDQLQGATVFSKIDFRSGYHQLRIKDGDVPKTAFRSRYEH 850
R+LNKVTVKNRYPL RIDD FDQLQGATVFSKID RSGYHQLRIKDGDVPKTAFRSRY H
Sbjct: 781 RELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRYGH 840
Query: 851 YEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRMVLQT 910
YEFIVMSFGLTNAP VFMDLMNRVF+EFLDTFVIVFIDDILIY K EAEHEEHLR+VLQT
Sbjct: 841 YEFIVMSFGLTNAPAVFMDLMNRVFKEFLDTFVIVFIDDILIYSKMEAEHEEHLRIVLQT 900
Query: 911 LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEALTSWTRPSTVSKVRSFLGL 970
LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEA+T WTRPSTVS+VRSFLGL
Sbjct: 901 LRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGL 960
Query: 971 AGYYRRFVENFSCIATPLPQLTRKGAPFVWSKAC-------------------------- 1030
AGYYRRFVENFS IATPL QLTRKGAPFVWSKAC
Sbjct: 961 AGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSF 1020
Query: 1031 ------------------------------------------------------------ 1090
Sbjct: 1021 VIYSDASKKGLGFVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVIFALKIWRHYLYGE 1080
Query: 1091 -------------------------------------------KANVVADALSRKVSHSA 1150
KANVVADALSRKVSHSA
Sbjct: 1081 KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSA 1140
Query: 1151 ALITRQAPLHRDLERAEIAVLVGAVTMQLAQLTVQSTLRQRIIDAQSNDLSLVEKRGLAE 1210
ALITR APLHRDLERAEIAV VGA+TMQLAQLTVQ TLRQRII AQSND LVEKRGLAE
Sbjct: 1141 ALITRHAPLHRDLERAEIAVSVGAITMQLAQLTVQPTLRQRIIGAQSNDPYLVEKRGLAE 1200
Query: 1211 AAQAVEFSISSDG----------------------------------STKMYQDLKRVYW 1270
A QA FSISSDG STKMYQDLKRVYW
Sbjct: 1201 AGQAEGFSISSDGGLVFERRLCVPSDSAIKIELLSEAHSSPFFMHPGSTKMYQDLKRVYW 1260
Query: 1271 WRNMKREVAEFVSKCLVCQLVKAPRQKPAGLLQPLSIPEWKWENVSMDFITRQPRTLRGF 1330
WRNMKREVAEFVS+CLVCQ VKAPRQKPAGLLQPLSIPEWKWENVSMDFIT PRTLRGF
Sbjct: 1261 WRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGF 1320
Query: 1331 TVIWVVVDRLTKSAHFVPGKSTYTTSKWAQLYMSEIVRLHGVPVSIVSDRDAHFTSNFG- 1358
TVIWVVVDRLTKSAHFVPGKSTY SKWAQLYMSEIVRLHGVPVSIVSDRDA FTS F
Sbjct: 1321 TVIWVVVDRLTKSAHFVPGKSTYIASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSQFWK 1380
BLAST of IVF0003789 vs. NCBI nr
Match:
KAA0063718.1 (pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 1975 bits (5116), Expect = 0.0
Identity = 1086/1492 (72.79%), Postives = 1118/1492 (74.93%), Query Frame = 0
Query: 103 VADLFGDSFPFLGWIRCEWTRTRGITKYQVRVQRGAYRREAGRMREGHMDASGFLYASAD 162
+ L G SF I + TR + + VRVQRGA RREAGRMREGHMDASGFLY
Sbjct: 443 ITRLIGASFGITRLICAFYGITRLLCR--VRVQRGADRREAGRMREGHMDASGFLYG--- 502
Query: 163 GSLVVVREMPPRRGARRGGRGGRGRGAGRVQPEVQPVAHATDPNAP-------------- 222
EMPPRRGARRGGRGGRGRGAGRVQPEVQPVA ATDP AP
Sbjct: 503 -------EMPPRRGARRGGRGGRGRGAGRVQPEVQPVAQATDPAAPVTHADLAAMEQRFR 562
Query: 223 ---------QQPAPPAPAPAPVPALVVPQIVPDQLSAEARHLRDFRNYNPSTFDGSLEDA 282
QQPAPPAP PAPVP VVPQ+ DQLSAEA+HLRDFR YNP+TFDGSLED
Sbjct: 563 DLIMQMREQQQPAPPAPVPAPVP--VVPQVASDQLSAEAKHLRDFRKYNPTTFDGSLEDP 622
Query: 283 TRAQLWLSSLKTIFRYMKCPKDQKVQCAVFMLTDRGTAWWETTERMLEGDEFLNLEQGDM 342
TRAQLWL SL+TIFRYMKCP+DQKVQCAVFMLTDRGTA + EFLNLEQGDM
Sbjct: 623 TRAQLWLLSLETIFRYMKCPEDQKVQCAVFMLTDRGTACLRDAKLQ----EFLNLEQGDM 682
Query: 343 TVEQYDAEFDMLSRFTSEMIAIETARADKFVRGLRLDIQGLVRAFRPATHVDALRLAVDL 402
TVEQYDAEFDMLSRF EMIA E ARADKFVRGLRLDIQGLVRAFRPATH DALRLAVDL
Sbjct: 683 TVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDL 742
Query: 403 SLQEKANSSKVAGRGSTSGQKRKTEQQPIPVPQRNFRPG--------------------- 462
SLQE+ANSSKVAGRGSTSGQKRK EQQP PVPQRNFRPG
Sbjct: 743 SLQERANSSKVAGRGSTSGQKRKAEQQPTPVPQRNFRPGGEFRRFQQKPFEAGEAARGKP 802
Query: 463 -----------------------------ADRCPMRLTGNAQNQGEGAPHQGKVFATNKT 522
ADRCPMRLTGNAQNQ GAPHQGKVFATNKT
Sbjct: 803 LCATCGKHHLGRCLFGTRTCFKCRQEGHTADRCPMRLTGNAQNQEAGAPHQGKVFATNKT 862
Query: 523 EAERAATVVTGTLPVLGHYALVLFDSGSSHSFISSVFVLHVRLEVEPLHHVLSVSTPSEE 582
EAERA TVVTGTLPVLGHYALVLFDSGSSHSFISS FVLH RLE
Sbjct: 863 EAERAGTVVTGTLPVLGHYALVLFDSGSSHSFISSAFVLHARLE---------------- 922
Query: 583 CMLAKEKVKACQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHASIDCSRKEVAFNPP 642
EKVKACQIEIAGH IEVTLLVLDMLDFDVILGMDWLAANHASIDCSRKEVAFNPP
Sbjct: 923 -----EKVKACQIEIAGHGIEVTLLVLDMLDFDVILGMDWLAANHASIDCSRKEVAFNPP 982
Query: 643 SMASLKFKGEGSRSLPQVISAIRTSKLLSQGTWGILASVVDTREVDVSLSSEPVVGDYPD 702
SMAS KFKGEGSRSLPQVISAIR SKLLSQG WGILASVVDTREVDVSLSSEPVV DYPD
Sbjct: 983 SMASFKFKGEGSRSLPQVISAIRASKLLSQGIWGILASVVDTREVDVSLSSEPVVRDYPD 1042
Query: 703 IFPEELPGLPSHREVEFAIELESGTVPIFRAPYRMAPVELKELKVQLQKVFDKGFIRPSV 762
+FPE+LPGLP HREVEFAIELE GTVPI RAPYRMAP ELKELKVQLQ++ DKGFIRPSV
Sbjct: 1043 VFPEDLPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSV 1102
Query: 763 SPWGAPVLFVKKKDGSMRLCIDYRDLNKVTVKNRYPLSRIDDFFDQLQGATVFSKIDFRS 822
SPWGAPVLFVKKKDGSMRLCIDYR+LNKVTVKNRYPL RIDD FDQLQGATVF KID RS
Sbjct: 1103 SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFFKIDLRS 1162
Query: 823 GYHQLRIKDGDVPKTAFRSRYEHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFI 882
GYHQLRIKDGDVPKTAFRS+Y HYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFVIVFI
Sbjct: 1163 GYHQLRIKDGDVPKTAFRSKYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFI 1222
Query: 883 DDILIYFKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPA 942
DDILIY KTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGV VDPA
Sbjct: 1223 DDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVYVDPA 1282
Query: 943 KIEALTSWTRPSTVSKVRSFLGLAGYYRRFVENFSCIATPLPQLTRKGAPFVWSKAC--- 1002
KIEA+T WTRPSTVS+VRSFLGLAGYYRRFVENFS IATPL QLTRK APFVWSK C
Sbjct: 1283 KIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKEAPFVWSKVCEDS 1342
Query: 1003 ------------------------------------------------------------ 1062
Sbjct: 1343 FQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLSCVLMQQGKVVAYASRQLKSHEQNYP 1402
Query: 1063 ------------------------------------------------------------ 1122
Sbjct: 1403 THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCE 1462
Query: 1123 ------KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLVGAVTMQLAQLTVQST 1182
KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAV VGAVT+QLAQLTVQST
Sbjct: 1463 ILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTIQLAQLTVQST 1522
Query: 1183 LRQRIIDAQSNDLSLVEKRGLAEAAQAVEFSISSDG------------------------ 1242
LRQRIIDAQSND L EKRGLAEA QA EFSISSDG
Sbjct: 1523 LRQRIIDAQSNDPYLAEKRGLAEAGQATEFSISSDGGLLFERRLCVPSDSAVKTELLSEA 1582
Query: 1243 ----------STKMYQDLKRVYWWRNMKREVAEFVSKCLVCQLVKAPRQKPAGLLQPLSI 1302
STKMYQDLKRVYWWRNMKREVAEFVS+CLVCQ VKAP+QKPAGLLQPLSI
Sbjct: 1583 HSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPKQKPAGLLQPLSI 1642
Query: 1303 PEWKWENVSMDFITRQPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWAQLYMSEIV 1358
PEWKWENVSMDFIT PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYT SKWAQLYMSEIV
Sbjct: 1643 PEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV 1702
BLAST of IVF0003789 vs. NCBI nr
Match:
KAA0051357.1 (pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 1962 bits (5082), Expect = 0.0
Identity = 1068/1468 (72.75%), Postives = 1102/1468 (75.07%), Query Frame = 0
Query: 171 MPPRRGARRGGRGGRGRGAGRVQPEVQPVAHATDPNAPQQPAP-PAPAPAPVPALV--VP 230
MPPRRGARRGGRGGRGRGAGRVQPE P PAP PAP PAP PALV P
Sbjct: 1 MPPRRGARRGGRGGRGRGAGRVQPEKP-----ASPTPAPAPAPAPAPVPAPAPALVPVAP 60
Query: 231 QIVPDQLSAEARHLRDFRNYNPSTFDGSLEDATRAQLWLSSLKTIFRYMKCPKDQKVQCA 290
Q VPDQLSAEA+HLRDFR YNP+TFDGSLED TRAQ+WLSSL+TIFRYMKCP+DQKVQCA
Sbjct: 61 QFVPDQLSAEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCA 120
Query: 291 VFMLTDRGTAWWETTERMLEGD----------------------------EFLNLEQGDM 350
VFMLTDRGTAWWETTERML GD EFLNLEQGDM
Sbjct: 121 VFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDM 180
Query: 351 TVEQYDAEFDMLSRFTSEMIAIETARADKFVRGLRLDIQGLVRAFRPATHVDALRLAVDL 410
TVEQYDAEFDMLSRF EMIA E ARADKFVRGLRLDIQGLVRAFRPATH DALRLAVDL
Sbjct: 181 TVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDL 240
Query: 411 SLQEKANSSKVAGRGSTSGQKRKTEQQPIPVPQRNFRPG--------------------- 470
SLQE ANSSK AGRGSTSGQKRK EQQP+PVPQRNFR G
Sbjct: 241 SLQEMANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRSGGEFRSFQQKPFEAGEAARGKP 300
Query: 471 -----------------------------ADRCPMRLTGNAQNQGEGAPHQGKVFATNKT 530
ADRCP+RLTG AQNQG GAPHQG+VFATN+T
Sbjct: 301 LCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGIAQNQGAGAPHQGRVFATNRT 360
Query: 531 EAERAATVVTGTLPVLGHYALVLFDSGSSHSFISSVFVLHVRLEVEPLHHVLSVSTPSEE 590
EAE+A TVVTGTLPVLGHYALVLFDSGSSHSFISS FV H RLEVEPLHHVLSVSTPS E
Sbjct: 361 EAEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSAFVSHARLEVEPLHHVLSVSTPSGE 420
Query: 591 CMLAKEKVKACQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHASIDCSRKEVAFNPP 650
CML++EKVKACQIEIAGHVIEVTL+VLDMLDFDVILGMDWLAANHASIDCSRK+V FNPP
Sbjct: 421 CMLSREKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKDVTFNPP 480
Query: 651 SMASLKFKGEGSRSLPQVISAIRTSKLLSQGTWGILASVVDTREVDVSLSSEPVVGDYPD 710
SMAS KFKG GS+SLPQVISAIR SKLLSQGTWGILASVVDTRE DVSLSSEPVV DYPD
Sbjct: 481 SMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPD 540
Query: 711 IFPEELPGLPSHREVEFAIELESGTVPIFRAPYRMAPVELKELKVQLQKVFDKGFIRPSV 770
+FPEELPGLP HREVEFAIELE GTVPI RAPYRMAP ELKELKVQLQ++ DKGFIRP+V
Sbjct: 541 VFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPNV 600
Query: 771 SPWGAPVLFVKKKDGSMRLCIDYRDLNKVTVKNRYPLSRIDDFFDQLQGATVFSKIDFRS 830
SPWGAPVLFVKKKDGSMRLCIDYR+LNKVTVKNRYPL RIDD FDQLQGATVFSKID RS
Sbjct: 601 SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRS 660
Query: 831 GYHQLRIKDGDVPKTAFRSRYEHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFI 890
GY+QLRIKD DVPKTAFRSRY HYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFVIVFI
Sbjct: 661 GYNQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFI 720
Query: 891 DDILIYFKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPA 950
DDILIY KTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKA VSVDPA
Sbjct: 721 DDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKARVSVDPA 780
Query: 951 KIEALTSWTRPSTVSKVRSFLGLAGYYRRFVENFSCIATPLPQLTRKGAPFVWSKAC--- 1010
KIEA+T WTRPSTVS+VRSFLGLAGYYRRFVENFS IATPL QLTRKGAPFVWSKAC
Sbjct: 781 KIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDS 840
Query: 1011 ------------------------------------------------------------ 1070
Sbjct: 841 FQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYP 900
Query: 1071 ------------------------------------------------------------ 1130
Sbjct: 901 THDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCE 960
Query: 1131 ------KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLVGAVTMQLAQLTVQST 1190
KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAV VGAVTMQLAQLTVQ T
Sbjct: 961 ILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPT 1020
Query: 1191 LRQRIIDAQSNDLSLVEKRGLAEAAQAVEFSISSDG------------------------ 1250
LRQRIIDAQSND LVEKRGLAEA QAVEFS+SSDG
Sbjct: 1021 LRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLSFEGRLCVPSDSAVKTELLFEA 1080
Query: 1251 ----------STKMYQDLKRVYWWRNMKREVAEFVSKCLVCQLVKAPRQKPAGLLQPLSI 1310
STKMYQDLKRVYWWRNMKREVAEFVSKCLVCQ VK PRQKPAGLLQPLSI
Sbjct: 1081 HSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKEPRQKPAGLLQPLSI 1140
Query: 1311 PEWKWENVSMDFITRQPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWAQLYMSEIV 1358
PEWKWENVSMDFIT PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYT SKWAQLYMSEIV
Sbjct: 1141 PEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV 1200
BLAST of IVF0003789 vs. NCBI nr
Match:
KAA0052126.1 (pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 1960 bits (5077), Expect = 0.0
Identity = 1077/1483 (72.62%), Postives = 1113/1483 (75.05%), Query Frame = 0
Query: 103 VADLFGDSFPFLGWIRCEWTRTRGITKYQVRVQRGAYRREAGRMREGHMDASGFLYASAD 162
+ L G SF I + TR + + VRVQRGA RREAGRMREGHMDASGFLYASAD
Sbjct: 192 IIRLIGVSFGITRLICAFYGTTRLLCR--VRVQRGANRREAGRMREGHMDASGFLYASAD 251
Query: 163 GSLVVVREMPPRRGARRGGRGGRGRGAGRVQPEVQPVAHATDPNAPQQPAPPAPAPAPVP 222
V EMPPRRGARRGGRGGRGRGA RVQPEVQPVA ATDP AP
Sbjct: 252 ----VFWEMPPRRGARRGGRGGRGRGAERVQPEVQPVAQATDPAAP-------------- 311
Query: 223 ALVVPQIVPDQLSAEARHLRDFRNYNPSTFDGSLEDATRAQLWLSSLKTIFRYMKCPKDQ 282
+VPDQLSAEA+ LRDFR YNP+TFDGSLED TRAQLWLSSL+TIFRYMKCP+DQ
Sbjct: 312 ------VVPDQLSAEAKLLRDFRKYNPTTFDGSLEDPTRAQLWLSSLETIFRYMKCPEDQ 371
Query: 283 KVQCAVFMLTDRGTAWWETTERMLEGD----------------------------EFLNL 342
KVQCAVFMLTDRGTAWWETTERML GD +FLNL
Sbjct: 372 KVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQKFLNL 431
Query: 343 EQGDMTVEQYDAEFDMLSRFTSEMIAIETARADKFVRGLRLDIQGLVRAFRPATHVDALR 402
EQGDMTVEQYDAEFDMLSRF EMIA E ARADKFVRGLRLDIQGLVRAFRPATH DALR
Sbjct: 432 EQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALR 491
Query: 403 LAVDLSLQEKANSSKVAGRGSTSGQKRKTEQQPIPVPQRNFRPGADRCPMRLTGNAQNQG 462
LAVDLSLQE+ANSSK AGRGSTSGQKRKTEQQP+ VPQRNFR
Sbjct: 492 LAVDLSLQERANSSKAAGRGSTSGQKRKTEQQPVLVPQRNFR------------------ 551
Query: 463 EGAPHQGKVFATNKTEAERAATVVTGTLPVLGHYALVLFDSGSSHSFISSVFVLHVRLEV 522
GAPHQGKVFATNKTEAER TVV GTLPVLGHYALVLFDSGSSHSFIS FVLH RLEV
Sbjct: 552 SGAPHQGKVFATNKTEAERVGTVVIGTLPVLGHYALVLFDSGSSHSFISFAFVLHARLEV 611
Query: 523 EPLHHVLSVSTPSEECMLAKEKVKACQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANH 582
EPLH+VLSVSTPS ECML+KEKVK CQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAA H
Sbjct: 612 EPLHNVLSVSTPSGECMLSKEKVKTCQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAAKH 671
Query: 583 ASIDCSRKEVAFNPPSMASLKFKGEGSRSLPQVISAIRTSKLLSQGTWGILASVVDTREV 642
ASIDCS KEVAFNPPSMAS KFKGEGSRSLPQVIS IR SKLLSQGTWGILASVVDTREV
Sbjct: 672 ASIDCSCKEVAFNPPSMASFKFKGEGSRSLPQVISTIRASKLLSQGTWGILASVVDTREV 731
Query: 643 DVSLSSEPVVGDYPDIFPEELPGLPSHREVEFAIELESGTVPIFRAPYRMAPVELKELKV 702
DVSLSSEPVV DYPD+FPEELPGLP HREVEFAIELE GTVPI RAPYRMAP ELKELKV
Sbjct: 732 DVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKV 791
Query: 703 QLQKVFDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRDLNKVTVKNRYPLSRIDDFFD 762
QLQ++ DKGFIRPSVSPWGAPVLFVKKKDGSMRL IDYR+LNKVTVKNRYPL RIDD FD
Sbjct: 792 QLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLYIDYRELNKVTVKNRYPLPRIDDLFD 851
Query: 763 QLQGATVFSKIDFRSGYHQLRIKDGDVPKTAFRSRYEHYEFIVMSFGLTNAPTVFMDLMN 822
QLQGATVFSKI+ RSGYHQLRIKDGDVPK AFRSRY +YEFIVMSFGLTNAP VFMDLMN
Sbjct: 852 QLQGATVFSKINLRSGYHQLRIKDGDVPKIAFRSRYGYYEFIVMSFGLTNAPAVFMDLMN 911
Query: 823 RVFREFLDTFVIVFIDDILIYFKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSF 882
RVFREFLDTFVIVFID+ILIY KTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFWLKQVSF
Sbjct: 912 RVFREFLDTFVIVFIDNILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSF 971
Query: 883 LGHVVSKAGVSVDPAKIEALTSWTRPSTVSKVRSFLGLAGYYRRFVENFSCIATPLPQLT 942
LGHVVSKAGVSVDPAKIEA+T WTRPSTV VRSFLGLAGYYRRFVENFS IATPL QLT
Sbjct: 972 LGHVVSKAGVSVDPAKIEAVTGWTRPSTVKVVRSFLGLAGYYRRFVENFSRIATPLTQLT 1031
Query: 943 RKGAPFVWSKAC------------------------------------------------ 1002
RKGAPFVWSK C
Sbjct: 1032 RKGAPFVWSKTCEDSFQNLKQKLVIAPVLTVPDGSGSFLIYSDASKKGLGCVLMQQGKVV 1091
Query: 1003 ------------------------------------------------------------ 1062
Sbjct: 1092 AYASRQLKRHKQNYPTHDLELAAVVFPLKIWRHYLYGERIQIFTDHKSLKYFFTQKELNM 1151
Query: 1063 ---------------------KANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVLV 1122
KANVVADALSRKVSHSAALITRQAPL RDLERAEIAV V
Sbjct: 1152 RHRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLLRDLERAEIAVSV 1211
Query: 1123 GAVTMQLAQLTVQSTLRQRIIDAQSNDLSLVEKRGLAEAAQAVEFSISSDG--------- 1182
GAVT+QLAQLTVQSTLR+RIIDAQSND LVEKRGLAEA Q VEFSISSDG
Sbjct: 1212 GAVTIQLAQLTVQSTLRERIIDAQSNDPYLVEKRGLAEAGQVVEFSISSDGGLLFERRLC 1271
Query: 1183 -------------------------STKMYQDLKRVYWWRNMKREVAEFVSKCLVCQLVK 1242
STKMYQDLKRVYWWRNMKREVAEFVS+CLVCQ VK
Sbjct: 1272 VPSDSAVKTELLCEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVK 1331
Query: 1243 APRQKPAGLLQPLSIPEWKWENVSMDFITRQPRTLRGFTVIWVVVDRLTKSAHFVPGKST 1302
APRQKPAGLLQPLSIPEWKWENVSM FIT PRTLRGFTVIWVVVDRLTKSAHFVPGKST
Sbjct: 1332 APRQKPAGLLQPLSIPEWKWENVSMFFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKST 1391
Query: 1303 YTTSKWAQLYMSEIVRLHGVPVSIVSDRDAHFTSNFG----------------------- 1358
YT SKWAQLYMSEIVRLHGVPVSIVSDRDA F F
Sbjct: 1392 YTASKWAQLYMSEIVRLHGVPVSIVSDRDARFIFKFWKGLQTAMGMRLDFSTTFHPQTDG 1451
BLAST of IVF0003789 vs. TAIR 10
Match:
ATMG00860.1 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 98.6 bits (244), Expect = 4.2e-20
Identity = 45/96 (46.88%), Postives = 62/96 (64.58%), Query Frame = 0
Query: 825 HLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEALTSWTRPST 884
HL MVLQ ++ YA KC F Q+++LG H++S GVS DPAK+EA+ W P
Sbjct: 3 HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62
Query: 885 VSKVRSFLGLAGYYRRFVENFSCIATPLPQLTRKGA 919
+++R FLGL GYYRRFV+N+ I PL +L +K +
Sbjct: 63 TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS 98
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q99315 | 4.1e-73 | 25.66 | Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... | [more] |
P0CT41 | 2.0e-72 | 24.74 | Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... | [more] |
P0CT34 | 2.0e-72 | 24.74 | Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... | [more] |
P0CT35 | 2.0e-72 | 24.74 | Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... | [more] |
P0CT36 | 2.0e-72 | 24.74 | Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7V8L8 | 0.0e+00 | 75.03 | Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold679G00080 PE... | [more] |
A0A5A7TB42 | 0.0e+00 | 72.89 | Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold11... | [more] |
A0A5A7V810 | 0.0e+00 | 73.62 | Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold32... | [more] |
A0A5A7UAA8 | 0.0e+00 | 72.75 | Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55... | [more] |
A0A5A7UD41 | 0.0e+00 | 72.77 | Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57... | [more] |
Match Name | E-value | Identity | Description | |
ATMG00860.1 | 4.2e-20 | 46.88 | DNA/RNA polymerases superfamily protein | [more] |