IVF0003787 (gene) Melon (IVF77) v1

Overview
NameIVF0003787
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPolyprotein
Locationchr11: 10203695 .. 10204068 (+)
RNA-Seq ExpressionIVF0003787
SyntenyIVF0003787
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATATTTTGTTGGAGCTACAACACAATATCATATCCTCGGTATAAAATGTTGGTTAAAAAATCTAAAAATCAAATTGTGGGAAAAATACAATTTTCAGCATGCCACCATCAAACACATAAAGGAATGGTTCGCAGAGAACAAATATCTACAAGACATTGATCAAAGAAAGAATGTCGAGTTCTTAAATGACAAATCAAAACTCCATGTCGCACTTGCACAAGCCACAACTGATGCAGATTTCCAGAGATTATTATCAATAGCAGTAAATGCTTCTTCTTCTTCTAAGTCACCATCTTCTTCCATACAGGAAGACGAAGAACAAATAGATCCAGAATATGATCTAGACGATCTCGACTCACAACCTATGTGA

mRNA sequence

ATGGATATTTTGTTGGAGCTACAACACAATATCATATCCTCGCATGCCACCATCAAACACATAAAGGAATGGTTCGCAGAGAACAAATATCTACAAGACATTGATCAAAGAAAGAATGTCGAGTTCTTAAATGACAAATCAAAACTCCATGTCGCACTTGCACAAGCCACAACTGATGCAGATTTCCAGAGATTATTATCAATAGCAGTAAATGCTTCTTCTTCTTCTAAGTCACCATCTTCTTCCATACAGGAAGACGAAGAACAAATAGATCCAGAATATGATCTAGACGATCTCGACTCACAACCTATGTGA

Coding sequence (CDS)

ATGGATATTTTGTTGGAGCTACAACACAATATCATATCCTCGCATGCCACCATCAAACACATAAAGGAATGGTTCGCAGAGAACAAATATCTACAAGACATTGATCAAAGAAAGAATGTCGAGTTCTTAAATGACAAATCAAAACTCCATGTCGCACTTGCACAAGCCACAACTGATGCAGATTTCCAGAGATTATTATCAATAGCAGTAAATGCTTCTTCTTCTTCTAAGTCACCATCTTCTTCCATACAGGAAGACGAAGAACAAATAGATCCAGAATATGATCTAGACGATCTCGACTCACAACCTATGTGA

Protein sequence

MDILLELQHNIISSHATIKHIKEWFAENKYLQDIDQRKNVEFLNDKSKLHVALAQATTDADFQRLLSIAVNASSSSKSPSSSIQEDEEQIDPEYDLDDLDSQPM
Homology
BLAST of IVF0003787 vs. ExPASy TrEMBL
Match: A0A5A7SWC0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold213G00570 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.1e-37
Identity = 88/90 (97.78%), Postives = 88/90 (97.78%), Query Frame = 0

Query: 15  HATIKHIKEWFAENKYLQDIDQRKNVEFLNDKSKLHVALAQATTDADFQRLLSIAVNASS 74
           HATIKHIKEWFAENKYLQDIDQRKNVEFLNDKSKL VALAQATTDADFQRLLS AVNASS
Sbjct: 18  HATIKHIKEWFAENKYLQDIDQRKNVEFLNDKSKLLVALAQATTDADFQRLLSTAVNASS 77

Query: 75  SSKSPSSSIQEDEEQIDPEYDLDDLDSQPM 105
           SSKSPSSSIQEDEEQIDPEYDLDDLDSQPM
Sbjct: 78  SSKSPSSSIQEDEEQIDPEYDLDDLDSQPM 107

BLAST of IVF0003787 vs. ExPASy TrEMBL
Match: A0A5A7SNT5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G001890 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.7e-28
Identity = 73/92 (79.35%), Postives = 79/92 (85.87%), Query Frame = 0

Query: 15  HATIKHIKEWFAENKYLQDIDQRKNVEFLNDKSKLHVALAQATTDADFQRLLSIAVNASS 74
           HATIKHIKEWF EN YLQDIDQ KNV+FLN+KSKL   LAQATTDADFQRLL   VNAS+
Sbjct: 53  HATIKHIKEWFVENGYLQDIDQGKNVKFLNEKSKLLATLAQATTDADFQRLLPTTVNAST 112

Query: 75  SSKSPSSSIQEDEEQIDPEYDLDD--LDSQPM 105
           SSKS SS +QEDEEQ+DPEYDLD+  LDSQPM
Sbjct: 113 SSKSTSSFLQEDEEQVDPEYDLDNPFLDSQPM 144

BLAST of IVF0003787 vs. ExPASy TrEMBL
Match: A0A5D3BI61 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232G00950 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.6e-17
Identity = 58/81 (71.60%), Postives = 62/81 (76.54%), Query Frame = 0

Query: 25  FAENKYLQDIDQRKNVEFLNDKSKLHVALAQATTDADFQRLLSIAVNASSSSKSPSSSIQ 84
           + +N  LQDIDQRKN +FLNDK K   AL QAT DADFQRLLS AVN SSSSK   S IQ
Sbjct: 139 YQKNGDLQDIDQRKNAKFLNDKLKFLAALVQATIDADFQRLLSTAVNTSSSSKPAPSFIQ 198

Query: 85  EDEEQIDPEYDLDD--LDSQP 104
           EDEEQ+D EYDLDD  LDSQP
Sbjct: 199 EDEEQVDLEYDLDDPFLDSQP 219

BLAST of IVF0003787 vs. ExPASy TrEMBL
Match: A0A0A0KYU0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G427780 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.4e-16
Identity = 46/56 (82.14%), Postives = 49/56 (87.50%), Query Frame = 0

Query: 12 ISSHATIKHIKEWFAENKYLQDIDQRKNVEFLNDKSKLHVALAQATTDADFQRLLS 68
          I  HATIKH+KEWFAEN YLQDIDQRKN+EFLNDKSKL   LAQATTD +FQRLLS
Sbjct: 18 IKEHATIKHMKEWFAENNYLQDIDQRKNIEFLNDKSKLLALLAQATTDTNFQRLLS 73

BLAST of IVF0003787 vs. ExPASy TrEMBL
Match: A0A5A7UZX0 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold233G00530 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 5.8e-15
Identity = 43/48 (89.58%), Postives = 45/48 (93.75%), Query Frame = 0

Query: 15  HATIKHIKEWFAENKYLQDIDQRKNVEFLNDKSKLHVALAQATTDADF 63
           HATIKHIKEWFA+N YLQDIDQRKN+EFLNDKSKL  ALAQATTDADF
Sbjct: 84  HATIKHIKEWFADNGYLQDIDQRKNIEFLNDKSKLLAALAQATTDADF 131

BLAST of IVF0003787 vs. NCBI nr
Match: KAA0034823.1 (hypothetical protein E6C27_scaffold213G00570 [Cucumis melo var. makuwa])

HSP 1 Score: 166 bits (421), Expect = 3.94e-51
Identity = 88/90 (97.78%), Postives = 88/90 (97.78%), Query Frame = 0

Query: 15  HATIKHIKEWFAENKYLQDIDQRKNVEFLNDKSKLHVALAQATTDADFQRLLSIAVNASS 74
           HATIKHIKEWFAENKYLQDIDQRKNVEFLNDKSKL VALAQATTDADFQRLLS AVNASS
Sbjct: 18  HATIKHIKEWFAENKYLQDIDQRKNVEFLNDKSKLLVALAQATTDADFQRLLSTAVNASS 77

Query: 75  SSKSPSSSIQEDEEQIDPEYDLDDLDSQPM 104
           SSKSPSSSIQEDEEQIDPEYDLDDLDSQPM
Sbjct: 78  SSKSPSSSIQEDEEQIDPEYDLDDLDSQPM 107

BLAST of IVF0003787 vs. NCBI nr
Match: KAA0025901.1 (hypothetical protein E6C27_scaffold34G001890 [Cucumis melo var. makuwa])

HSP 1 Score: 135 bits (340), Expect = 2.66e-38
Identity = 73/92 (79.35%), Postives = 79/92 (85.87%), Query Frame = 0

Query: 15  HATIKHIKEWFAENKYLQDIDQRKNVEFLNDKSKLHVALAQATTDADFQRLLSIAVNASS 74
           HATIKHIKEWF EN YLQDIDQ KNV+FLN+KSKL   LAQATTDADFQRLL   VNAS+
Sbjct: 53  HATIKHIKEWFVENGYLQDIDQGKNVKFLNEKSKLLATLAQATTDADFQRLLPTTVNAST 112

Query: 75  SSKSPSSSIQEDEEQIDPEYDLDD--LDSQPM 104
           SSKS SS +QEDEEQ+DPEYDLD+  LDSQPM
Sbjct: 113 SSKSTSSFLQEDEEQVDPEYDLDNPFLDSQPM 144

BLAST of IVF0003787 vs. NCBI nr
Match: XP_031739746.1 (uncharacterized protein LOC116403279 [Cucumis sativus] >KAE8649669.1 hypothetical protein Csa_012459 [Cucumis sativus])

HSP 1 Score: 97.4 bits (241), Expect = 8.19e-24
Identity = 46/56 (82.14%), Postives = 49/56 (87.50%), Query Frame = 0

Query: 12 ISSHATIKHIKEWFAENKYLQDIDQRKNVEFLNDKSKLHVALAQATTDADFQRLLS 67
          I  HATIKH+KEWFAEN YLQDIDQRKN+EFLNDKSKL   LAQATTD +FQRLLS
Sbjct: 25 IKEHATIKHMKEWFAENNYLQDIDQRKNIEFLNDKSKLLALLAQATTDTNFQRLLS 80

BLAST of IVF0003787 vs. NCBI nr
Match: TYJ98361.1 (hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa])

HSP 1 Score: 97.8 bits (242), Expect = 1.75e-22
Identity = 58/81 (71.60%), Postives = 62/81 (76.54%), Query Frame = 0

Query: 25  FAENKYLQDIDQRKNVEFLNDKSKLHVALAQATTDADFQRLLSIAVNASSSSKSPSSSIQ 84
           + +N  LQDIDQRKN +FLNDK K   AL QAT DADFQRLLS AVN SSSSK   S IQ
Sbjct: 139 YQKNGDLQDIDQRKNAKFLNDKLKFLAALVQATIDADFQRLLSTAVNTSSSSKPAPSFIQ 198

Query: 85  EDEEQIDPEYDLDD--LDSQP 103
           EDEEQ+D EYDLDD  LDSQP
Sbjct: 199 EDEEQVDLEYDLDDPFLDSQP 219

BLAST of IVF0003787 vs. NCBI nr
Match: KAA0059031.1 (polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 92.4 bits (228), Expect = 1.81e-21
Identity = 43/48 (89.58%), Postives = 45/48 (93.75%), Query Frame = 0

Query: 15  HATIKHIKEWFAENKYLQDIDQRKNVEFLNDKSKLHVALAQATTDADF 62
           HATIKHIKEWFA+N YLQDIDQRKN+EFLNDKSKL  ALAQATTDADF
Sbjct: 84  HATIKHIKEWFADNGYLQDIDQRKNIEFLNDKSKLLAALAQATTDADF 131

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7SWC01.1e-3797.78Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7SNT52.7e-2879.35Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BI613.6e-1771.60Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KYU01.4e-1682.14Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G427780 PE=4 SV=1[more]
A0A5A7UZX05.8e-1589.58Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold233G00530 PE... [more]
Match NameE-valueIdentityDescription
KAA0034823.13.94e-5197.78hypothetical protein E6C27_scaffold213G00570 [Cucumis melo var. makuwa][more]
KAA0025901.12.66e-3879.35hypothetical protein E6C27_scaffold34G001890 [Cucumis melo var. makuwa][more]
XP_031739746.18.19e-2482.14uncharacterized protein LOC116403279 [Cucumis sativus] >KAE8649669.1 hypothetica... [more]
TYJ98361.11.75e-2271.60hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa][more]
KAA0059031.11.81e-2189.58polyprotein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..104

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0003787.2IVF0003787.2mRNA