
IVF0003709 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGAGATTGGATTGAGAGAGATGACGTCGGCGGCCGGAAATCAAATGCGAGCGGTGGATGGTGGAGGGAGAAAATGGCAACGATGGTGGAGGGAGAAAACGGTTAAGGTCGATCGGTTGGTGGAGGGAGAAAACGGCAACGATGGTGGATGGTGGAGGGAGAAAACGGCTGAGGTCGGAGGGCTTTGA ATGGCAGAGATTGGATTGAGAGAGATGACGTCGGCGGCCGGAAATCAAATGCGAGCGGTGGATGGTGGAGGGAGAAAATGGCAACGATGGTGGAGGGAGAAAACGGTTAAGGTCGATCGGTTGGTGGAGGGAGAAAACGGCAACGATGGTGGATGGTGGAGGGAGAAAACGGCTGAGGTCGGAGGGCTTTGA ATGGCAGAGATTGGATTGAGAGAGATGACGTCGGCGGCCGGAAATCAAATGCGAGCGGTGGATGGTGGAGGGAGAAAATGGCAACGATGGTGGAGGGAGAAAACGGTTAAGGTCGATCGGTTGGTGGAGGGAGAAAACGGCAACGATGGTGGATGGTGGAGGGAGAAAACGGCTGAGGTCGGAGGGCTTTGA MAEIGLREMTSAAGNQMRAVDGGGRKWQRWWREKTVKVDRLVEGENGNDGGWWREKTAEVGGL Homology
BLAST of IVF0003709 vs. ExPASy TrEMBL
Match: A0A5A7UXJ5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold409G00310 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 6.7e-06 Identity = 36/58 (62.07%), Postives = 39/58 (67.24%), Query Frame = 0
BLAST of IVF0003709 vs. ExPASy TrEMBL
Match: A0A5D3C1D1 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1415G00490 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 7.4e-05 Identity = 28/50 (56.00%), Postives = 31/50 (62.00%), Query Frame = 0
BLAST of IVF0003709 vs. ExPASy TrEMBL
Match: A0A5A7VKQ7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G004100 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.6e-04 Identity = 28/49 (57.14%), Postives = 30/49 (61.22%), Query Frame = 0
BLAST of IVF0003709 vs. NCBI nr
Match: KAA0058345.1 (hypothetical protein E6C27_scaffold409G00310 [Cucumis melo var. makuwa]) HSP 1 Score: 60.8 bits (146), Expect = 1.87e-10 Identity = 33/43 (76.74%), Postives = 34/43 (79.07%), Query Frame = 0
BLAST of IVF0003709 vs. NCBI nr
Match: KAA0066345.1 (hypothetical protein E6C27_scaffold21G004100 [Cucumis melo var. makuwa]) HSP 1 Score: 56.2 bits (134), Expect = 4.27e-08 Identity = 28/52 (53.85%), Postives = 31/52 (59.62%), Query Frame = 0
BLAST of IVF0003709 vs. NCBI nr
Match: KAA0063959.1 (gag/pol protein [Cucumis melo var. makuwa] >TYK05180.1 gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 57.0 bits (136), Expect = 1.91e-07 Identity = 28/52 (53.85%), Postives = 32/52 (61.54%), Query Frame = 0
BLAST of IVF0003709 vs. NCBI nr
Match: KAA0065564.1 (hypothetical protein E6C27_scaffold90G00010 [Cucumis melo var. makuwa]) HSP 1 Score: 50.1 bits (118), Expect = 1.07e-05 Identity = 21/36 (58.33%), Postives = 24/36 (66.67%), Query Frame = 0
BLAST of IVF0003709 vs. NCBI nr
Match: KAA0058105.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 48.5 bits (114), Expect = 1.87e-04 Identity = 19/29 (65.52%), Postives = 23/29 (79.31%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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