IVF0003705 (gene) Melon (IVF77) v1

Overview


Name	IVF0003705
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Transposon Tf2-1 polyprotein isoform X1
Location	chr08: 30235521 .. 30235853 (-)
RNA-Seq Expression	IVF0003705
Synteny	IVF0003705

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACAGAAATGCATGGAGGAGAAGCTGAAAACGTTTGATCAAGAAATTTTAGGAATACGCGCTAAATTACACAAGTTACCGTCAATTGAGGAAAATCTGATGTCGTTAGCGAAAAGTATGAGGTTAGGATTACAAGCCAAAAAGCAACAACAATCGTTGTTGAAATATATTGAAGGTAACGTGAAGGAGAAATCCACAATGATCGGAGGAGTAACGGAATCAGCAAGCAAAGGACCAATGATGGAGAGCACGATTGAAGGAGAAAGTACTTCAATGAAGGAAATCGAAATCAAAGGGAAAACGAGCAAAGGTGAAAGTGAAGAAAATTAG

mRNA sequence

ATGGCACAGAAATGCATGGAGGAGAAGCTGAAAACGTTTGATCAAGAAATTTTAGGAATACGCGCTAAATTACACAAGTTACCGTCAATTGAGGAAAATCTGATGTCGTTAGCGAAAAGTATGAGGTTAGGATTACAAGCCAAAAAGCAACAACAATCGTTGTTGAAATATATTGAAGGTAACGTGAAGGAGAAATCCACAATGATCGGAGGAGTAACGGAATCAGCAAGCAAAGGACCAATGATGGAGAGCACGATTGAAGGAGAAAGTACTTCAATGAAGGAAATCGAAATCAAAGGGAAAACGAGCAAAGGTGAAAGTGAAGAAAATTAG

Coding sequence (CDS)

ATGGCACAGAAATGCATGGAGGAGAAGCTGAAAACGTTTGATCAAGAAATTTTAGGAATACGCGCTAAATTACACAAGTTACCGTCAATTGAGGAAAATCTGATGTCGTTAGCGAAAAGTATGAGGTTAGGATTACAAGCCAAAAAGCAACAACAATCGTTGTTGAAATATATTGAAGGTAACGTGAAGGAGAAATCCACAATGATCGGAGGAGTAACGGAATCAGCAAGCAAAGGACCAATGATGGAGAGCACGATTGAAGGAGAAAGTACTTCAATGAAGGAAATCGAAATCAAAGGGAAAACGAGCAAAGGTGAAAGTGAAGAAAATTAG

Protein sequence

MAQKCMEEKLKTFDQEILGIRAKLHKLPSIEENLMSLAKSMRLGLQAKKQQQSLLKYIEGNVKEKSTMIGGVTESASKGPMMESTIEGESTSMKEIEIKGKTSKGESEEN

Homology

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BLAST of IVF0003705 vs. ExPASy TrEMBL
Match: A0A5A7T7Y2 (Exosome complex component CSL4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G002000 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 6.8e-22
Identity = 68/99 (68.69%), Postives = 79/99 (79.80%), Query Frame = 0


Query: 13  FDQEILGIRAKLHKLPSIEENLMSLAKSM-RLGLQAKKQQQSLLKYIEGNVKEKSTMIGG 72
           FDQEI GI+A+LHKLP+IEENLMSLAKS+ RLG+QA+KQ Q LLKY+E   KEKSTM  G
Sbjct: 2   FDQEISGIQAELHKLPTIEENLMSLAKSIERLGMQAEKQHQLLLKYVESMAKEKSTMSEG 61

Query: 73  VTESASKGPMMESTIEGESTSMKEIEIKGKTSKGESEEN 111
           VTESAS+G  M  TIE  ST MKEI  +G+T+K E EEN
Sbjct: 62  VTESASQGSAMAKTIEEGSTPMKEIGSEGRTTKIEIEEN 100

[Close]

BLAST of IVF0003705 vs. ExPASy TrEMBL
Match: A0A5A7UKU8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G00900 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.5e-21
Identity = 69/113 (61.06%), Postives = 86/113 (76.11%), Query Frame = 0


Query: 1   MAQKCMEEKLKTFDQEILGIRAKLHKLPSIEENLMSLAKSM-RLGLQAKKQQQS---LLK 60
           MAQK +EEKL+ FDQ+I  IR +LHKLP+IEENL S AKS+ RLG+QA+KQQQ    LLK
Sbjct: 1   MAQKRIEEKLEAFDQDISEIRVELHKLPTIEENLSSTAKSIERLGIQAEKQQQQQQLLLK 60

Query: 61  YIEGNVKEKSTMIGGVTESASKGPMMESTIEGESTSMKEIEIKGKTSKGESEE 110
           YIEG VKEKSTMI G+  S+SKG  +ES +EG   +MK+ +++ K SK E EE
Sbjct: 61  YIEGMVKEKSTMIEGIEGSSSKGRPVESVLEGSDATMKDTKLEVKMSKIEEEE 113

[Close]

BLAST of IVF0003705 vs. ExPASy TrEMBL
Match: A0A5D3DHM5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G00650 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.2e-15
Identity = 60/105 (57.14%), Postives = 77/105 (73.33%), Query Frame = 0


Query: 1   MAQKCMEEKLKTFDQEILGIRAKLHKLPSIEENLMSLAKSM-RLGLQAKK--QQQSLLKY 60
           MAQK +EEKLK  DQ+   IR +LHKL +IEENL S+AKS+ RLG+QA+K  QQQ LLK 
Sbjct: 1   MAQKRIEEKLKPVDQDTSSIRVELHKLSTIEENLASMAKSIERLGIQAEKQHQQQLLLKC 60

Query: 61  IEGNVKEKSTMIGGVTESASKGPMMESTIEGESTSMKEIEIKGKT 103
           IEG +KEKSTMI G   S+SKG  + S ++G + S++EI+   KT
Sbjct: 61  IEGIMKEKSTMIEGPEGSSSKGSRIASMMDGGNPSIQEIKTATKT 105

[Close]

BLAST of IVF0003705 vs. ExPASy TrEMBL
Match: A0A5A7T6R2 (Histone-lysine N-methyltransferase ASHR1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G001010 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.8e-14
Identity = 54/111 (48.65%), Postives = 76/111 (68.47%), Query Frame = 0


Query: 1   MAQKCMEEKLKTFDQEILGIRAKLHKLPSIEENLMSLAKSM-RLGLQAKKQQQSLLKYIE 60
           M  K +EEKL+ FDQEI  I+ + HKLP+IEE L+S+ KS+ RL +Q  KQQQ LLKY+E
Sbjct: 1   MEHKRIEEKLEEFDQEIAEIQLEFHKLPTIEEKLLSMMKSIERLEIQGNKQQQLLLKYVE 60

Query: 61  GNVKEKSTMIGGVTESASKGPMMESTIEGESTSMKEIEIKGKTSKGESEEN 111
           G +K++ST++ G+ ES SK   +E  ++G    MK I+I  KT+  E  +N
Sbjct: 61  GIMKKRSTLLRGMEESLSKEQSIERIVKGGGAMMKGIKIDEKTTTVEEYKN 111

[Close]

BLAST of IVF0003705 vs. ExPASy TrEMBL
Match: A0A5A7UUC3 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00180 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.8e-14
Identity = 51/101 (50.50%), Postives = 68/101 (67.33%), Query Frame = 0


Query: 1   MAQKCMEEKLKTFDQEILGIRAKLHKLPSIEENLMSLAKSM-RLGLQAKKQQQSLLKYIE 60
           M  K  EEKL  FD EI G+R +LHKLP+IEEN M+  KS+ RLG+QAKK ++ L+ Y+E
Sbjct: 1   MTHKHFEEKLDAFDPEISGMRVELHKLPAIEENFMTRVKSIKRLGVQAKKHKKLLMMYVE 60

Query: 61  GNVKEKSTMIGGVTESASKGPMMESTIEGESTSMKEIEIKG 101
           G  K  S  +GG+ ES SKG  +ES +EG  TS  + + +G
Sbjct: 61  GLSKGHSITVGGLEESLSKGKSIESNVEGGETSKNKDKSRG 101

[Close]

BLAST of IVF0003705 vs. NCBI nr
Match: KAA0054161.1 (uncharacterized protein E6C27_scaffold131G00900 [Cucumis melo var. makuwa])

HSP 1 Score: 111 bits (277), Expect = 5.68e-29
Identity = 69/113 (61.06%), Postives = 86/113 (76.11%), Query Frame = 0


Query: 1   MAQKCMEEKLKTFDQEILGIRAKLHKLPSIEENLMSLAKSM-RLGLQAKKQQQS---LLK 60
           MAQK +EEKL+ FDQ+I  IR +LHKLP+IEENL S AKS+ RLG+QA+KQQQ    LLK
Sbjct: 1   MAQKRIEEKLEAFDQDISEIRVELHKLPTIEENLSSTAKSIERLGIQAEKQQQQQQLLLK 60

Query: 61  YIEGNVKEKSTMIGGVTESASKGPMMESTIEGESTSMKEIEIKGKTSKGESEE 109
           YIEG VKEKSTMI G+  S+SKG  +ES +EG   +MK+ +++ K SK E EE
Sbjct: 61  YIEGMVKEKSTMIEGIEGSSSKGRPVESVLEGSDATMKDTKLEVKMSKIEEEE 113

[Close]

BLAST of IVF0003705 vs. NCBI nr
Match: KAA0038326.1 (Exosome complex component CSL4 [Cucumis melo var. makuwa])

HSP 1 Score: 112 bits (281), Expect = 2.78e-26
Identity = 68/99 (68.69%), Postives = 79/99 (79.80%), Query Frame = 0


Query: 13  FDQEILGIRAKLHKLPSIEENLMSLAKSM-RLGLQAKKQQQSLLKYIEGNVKEKSTMIGG 72
           FDQEI GI+A+LHKLP+IEENLMSLAKS+ RLG+QA+KQ Q LLKY+E   KEKSTM  G
Sbjct: 2   FDQEISGIQAELHKLPTIEENLMSLAKSIERLGMQAEKQHQLLLKYVESMAKEKSTMSEG 61

Query: 73  VTESASKGPMMESTIEGESTSMKEIEIKGKTSKGESEEN 110
           VTESAS+G  M  TIE  ST MKEI  +G+T+K E EEN
Sbjct: 62  VTESASQGSAMAKTIEEGSTPMKEIGSEGRTTKIEIEEN 100

[Close]

BLAST of IVF0003705 vs. NCBI nr
Match: KAA0049778.1 (uncharacterized protein E6C27_scaffold76G001330 [Cucumis melo var. makuwa] >TYK23085.1 uncharacterized protein E5676_scaffold142G00650 [Cucumis melo var. makuwa])

HSP 1 Score: 91.7 bits (226), Expect = 2.63e-21
Identity = 60/105 (57.14%), Postives = 77/105 (73.33%), Query Frame = 0


Query: 1   MAQKCMEEKLKTFDQEILGIRAKLHKLPSIEENLMSLAKSM-RLGLQAKKQ--QQSLLKY 60
           MAQK +EEKLK  DQ+   IR +LHKL +IEENL S+AKS+ RLG+QA+KQ  QQ LLK 
Sbjct: 1   MAQKRIEEKLKPVDQDTSSIRVELHKLSTIEENLASMAKSIERLGIQAEKQHQQQLLLKC 60

Query: 61  IEGNVKEKSTMIGGVTESASKGPMMESTIEGESTSMKEIEIKGKT 102
           IEG +KEKSTMI G   S+SKG  + S ++G + S++EI+   KT
Sbjct: 61  IEGIMKEKSTMIEGPEGSSSKGSRIASMMDGGNPSIQEIKTATKT 105

[Close]

BLAST of IVF0003705 vs. NCBI nr
Match: KAA0037165.1 (histone-lysine N-methyltransferase ASHR1 isoform X1 [Cucumis melo var. makuwa] >TYK13907.1 histone-lysine N-methyltransferase ASHR1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 87.8 bits (216), Expect = 4.96e-19
Identity = 52/103 (50.49%), Postives = 72/103 (69.90%), Query Frame = 0


Query: 1   MAQKCMEEKLKTFDQEILGIRAKLHKLPSIEENLMSLAKSM-RLGLQAKKQQQSLLKYIE 60
           M  K +EEKL+ FDQEI  I+ + HKLP+IEE L+S+ KS+ RL +Q  KQQQ LLKY+E
Sbjct: 1   MEHKRIEEKLEEFDQEIAEIQLEFHKLPTIEEKLLSMMKSIERLEIQGNKQQQLLLKYVE 60

Query: 61  GNVKEKSTMIGGVTESASKGPMMESTIEGESTSMKEIEIKGKT 102
           G +K++ST++ G+ ES SK   +E  ++G    MK I+I  KT
Sbjct: 61  GIMKKRSTLLRGMEESLSKEQSIERIVKGGGAMMKGIKIDEKT 103

[Close]

BLAST of IVF0003705 vs. NCBI nr
Match: KAA0056362.1 (histone-lysine N-methyltransferase ASHR1 isoform X1 [Cucumis melo var. makuwa] >TYK29153.1 histone-lysine N-methyltransferase ASHR1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 84.7 bits (208), Expect = 1.40e-18
Identity = 56/101 (55.45%), Postives = 72/101 (71.29%), Query Frame = 0


Query: 1   MAQKCMEEKLKTFDQEILGIRAKLHKLPSIEENLMSLAKSM-RLGLQAKKQQQSLLKYIE 60
           M  K +EEKL+ FDQEI G+R KLHK  +IE NLMSL+KS+ RL +QAKK+ QSLLKY+E
Sbjct: 1   MVHKQIEEKLEIFDQEISGMRTKLHKSLAIEVNLMSLSKSIDRLVMQAKKEHQSLLKYVE 60

Query: 61  GNVKEKSTMIGGVTESASKGPMM-ESTIEGESTSMKEIEIK 99
              KEKS M  G+    S+G +M ++T EG S  MK+ E+K
Sbjct: 61  SKAKEKSMMSEGLIVYVSQGSVMTKATKEGNSL-MKKSEVK 100

The following BLAST results are available for this feature:

BLAST of IVF0003705 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0003705 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T7Y2	6.8e-22	68.69	Exosome complex component CSL4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5A7UKU8	1.5e-21	61.06	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DHM5	1.2e-15	57.14	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7T6R2	1.8e-14	48.65	Histone-lysine N-methyltransferase ASHR1 isoform X1 OS=Cucumis melo var. makuwa ...	[more]
A0A5A7UUC3	1.8e-14	50.50	Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

BLAST of IVF0003705 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0054161.1	5.68e-29	61.06	uncharacterized protein E6C27_scaffold131G00900 [Cucumis melo var. makuwa]	[more]
KAA0038326.1	2.78e-26	68.69	Exosome complex component CSL4 [Cucumis melo var. makuwa]	[more]
KAA0049778.1	2.63e-21	57.14	uncharacterized protein E6C27_scaffold76G001330 [Cucumis melo var. makuwa] >TYK2...	[more]
KAA0037165.1	4.96e-19	50.49	histone-lysine N-methyltransferase ASHR1 isoform X1 [Cucumis melo var. makuwa] >...	[more]
KAA0056362.1	1.40e-18	55.45	histone-lysine N-methyltransferase ASHR1 isoform X1 [Cucumis melo var. makuwa] >...	[more]

BLAST of IVF0003705 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0003705.1	IVF0003705.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098869	cellular oxidant detoxification
biological_process	GO:0008152	metabolic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0004601	peroxidase activity
molecular_function	GO:0016740	transferase activity