IVF0003617 (gene) Melon (IVF77) v1

Overview
NameIVF0003617
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase
Locationchr08: 30006918 .. 30008348 (-)
RNA-Seq ExpressionIVF0003617
SyntenyIVF0003617
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCAAACTGAGATTGTAAGAAGACAGTCAGAAGACAGTAATTTACAGAAGAAGTTTGAGAAATCCAAGAAAGGCTTAGAGGTGGAGTTTAAGCTGAGAACAGATGGAGCCATTGTTAAACAAGGAAGATTATGTGTTCCGAATATCAGTGAGCTTAAGAATGCTATTCTAGAAGAAGCTCACAGTTCAGCTTACGCTATGCATCCAGGTAGCACCAAGATGTACAGAACTTTAAAGAAGACTTATTGGTGGTCTGGAATGAAGCAAGAGATAGCTGAATATGTTGATAGATGTTTGATTTTTCAACAGGTTAAACCAGTAAGACAGAGGCCAGGAGGATTTCTTAATCCTTTGCCAGTGCCAGAATGGAAATGGGAGCATATTACTATGGATTTTCTATTTGGATTACCTCGTACATCCAGTGGACATGATGGTATATGGGTAATAGTAGACAAACTCACCAAGACGACACAATTTATACCGATTAAAATGACATCTACGTTAGACCATCTAGCGAGATTATATGTTGATAAGATTGTGAGTCAGTATGGAGTACCAGTGTCCATAGTTTCAGATAGGGATCCGAGGTTTACTTCTAAATTTTGGCCTAGTTTACAGAAAGCAATGGGAACAGGGCTAAAGTTTAGTACATCATTTCATCCCCAAACAGATGGTCAGTTCGAGAGGACCATCCAAACTTTAGAGGACATGTTGAGAGCATGTGTCCTACAACTTAAAGGAAGTTGGGATACCCACTTGCCACTTATGGAGTTTGCTTATAATAATAACTATCAGTCTAGTATCGGTATGGCACCATATGAAGCCTTATACGGGAGACCATGCAGAACTCCTGTGTGCTGGAATGAAGTGGGAGAGCGGAAGTTAGTAGGTCCTGAGTTGGTTCAGATTACGACAAACAATATTAAGTTGATCAGAGAAAATTTGAGGAAAGCCCAAGATCGACAGAAAAGTTATGCGGATAAACGACGAAGAAACCTAGAATTCCAAGTTGGAGATCAAGTTTTCTTGAAATTATCTCCATGGCGAGGTGTTATTCGTTTCGGAAGAAAAGGTAAGTTAAGTCCTAGATATATTGGGCCATATCAGATAACGGAACGAGTGGGACCAGCAGCGTATAGACTTGAGTTGCCAATAGAACTTGCACGAATACATGATGTTTTCCATGTATCCATGTTAAGAAAATATATACCAGATCCATCGCATGTGTTGCAAGATCAACCAGTTGAATTAAAAGAAGATTTGAGTTATGTTGAAGAACCAGTTCAGATTCTCGACAGAAAGGAACAAGTTTTGAGAAACAAAACGATTCCACTCATAAAAGTTTTGTGGAGACATCATGGAGCGGAGGAGGCAACTTGGGAACCAGAATATCAGATGAAGAAGAGCTATCCGATACTTTTCAGTTAA

mRNA sequence

ATGGAGCAAACTGAGATTGTAAGAAGACAGTCAGAAGACAGTAATTTACAGAAGAAGTTTGAGAAATCCAAGAAAGGCTTAGAGGTGGAGTTTAAGCTGAGAACAGATGGAGCCATTGTTAAACAAGGAAGATTATGTGTTCCGAATATCAGTGAGCTTAAGAATGCTATTCTAGAAGAAGCTCACAGTTCAGCTTACGCTATGCATCCAGGTAGCACCAAGATGTACAGAACTTTAAAGAAGACTTATTGGTGGTCTGGAATGAAGCAAGAGATAGCTGAATATGTTGATAGATGTTTGATTTTTCAACAGGTTAAACCAGTAAGACAGAGGCCAGGAGGATTTCTTAATCCTTTGCCAGTGCCAGAATGGAAATGGGAGCATATTACTATGGATTTTCTATTTGGATTACCTCGTACATCCAGTGGACATGATGGTATATGGGACATGTTGAGAGCATGTGTCCTACAACTTAAAGGAAGTTGGGATACCCACTTGCCACTTATGGAGTTTGCTTATAATAATAACTATCAGTCTAGTATCGGTATGGCACCATATGAAGCCTTATACGGGAGACCATGCAGAACTCCTGTGTGCTGGAATGAAGTGGGAGAGCGGAAGTTAGTAGGTCCTGAGTTGGTTCAGATTACGACAAACAATATTAAGTTGATCAGAGAAAATTTGAGGAAAGCCCAAGATCGACAGAAAAGTTATGCGGATAAACGACGAAGAAACCTAGAATTCCAAGTTGGAGATCAAGTTTTCTTGAAATTATCTCCATGGCGAGGTGTTATTCGTTTCGGAAGAAAAGGTAAGTTAAGTCCTAGATATATTGGGCCATATCAGATAACGGAACGAGTGGGACCAGCAGCGTATAGACTTGAGTTGCCAATAGAACTTGCACGAATACATGATGTTTTCCATGTATCCATGTTAAGAAAATATATACCAGATCCATCGCATGTGTTGCAAGATCAACCAGTTGAATTAAAAGAAGATTTGAGTTATGTTGAAGAACCAGTTCAGATTCTCGACAGAAAGGAACAAGTTTTGAGAAACAAAACGATTCCACTCATAAAAGTTTTGTGGAGACATCATGGAGCGGAGGAGGCAACTTGGGAACCAGAATATCAGATGAAGAAGAGCTATCCGATACTTTTCAGTTAA

Coding sequence (CDS)

ATGGAGCAAACTGAGATTGTAAGAAGACAGTCAGAAGACAGTAATTTACAGAAGAAGTTTGAGAAATCCAAGAAAGGCTTAGAGGTGGAGTTTAAGCTGAGAACAGATGGAGCCATTGTTAAACAAGGAAGATTATGTGTTCCGAATATCAGTGAGCTTAAGAATGCTATTCTAGAAGAAGCTCACAGTTCAGCTTACGCTATGCATCCAGGTAGCACCAAGATGTACAGAACTTTAAAGAAGACTTATTGGTGGTCTGGAATGAAGCAAGAGATAGCTGAATATGTTGATAGATGTTTGATTTTTCAACAGGTTAAACCAGTAAGACAGAGGCCAGGAGGATTTCTTAATCCTTTGCCAGTGCCAGAATGGAAATGGGAGCATATTACTATGGATTTTCTATTTGGATTACCTCGTACATCCAGTGGACATGATGGTATATGGGACATGTTGAGAGCATGTGTCCTACAACTTAAAGGAAGTTGGGATACCCACTTGCCACTTATGGAGTTTGCTTATAATAATAACTATCAGTCTAGTATCGGTATGGCACCATATGAAGCCTTATACGGGAGACCATGCAGAACTCCTGTGTGCTGGAATGAAGTGGGAGAGCGGAAGTTAGTAGGTCCTGAGTTGGTTCAGATTACGACAAACAATATTAAGTTGATCAGAGAAAATTTGAGGAAAGCCCAAGATCGACAGAAAAGTTATGCGGATAAACGACGAAGAAACCTAGAATTCCAAGTTGGAGATCAAGTTTTCTTGAAATTATCTCCATGGCGAGGTGTTATTCGTTTCGGAAGAAAAGGTAAGTTAAGTCCTAGATATATTGGGCCATATCAGATAACGGAACGAGTGGGACCAGCAGCGTATAGACTTGAGTTGCCAATAGAACTTGCACGAATACATGATGTTTTCCATGTATCCATGTTAAGAAAATATATACCAGATCCATCGCATGTGTTGCAAGATCAACCAGTTGAATTAAAAGAAGATTTGAGTTATGTTGAAGAACCAGTTCAGATTCTCGACAGAAAGGAACAAGTTTTGAGAAACAAAACGATTCCACTCATAAAAGTTTTGTGGAGACATCATGGAGCGGAGGAGGCAACTTGGGAACCAGAATATCAGATGAAGAAGAGCTATCCGATACTTTTCAGTTAA

Protein sequence

MEQTEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIFQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWDMLRACVLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLSYVEEPVQILDRKEQVLRNKTIPLIKVLWRHHGAEEATWEPEYQMKKSYPILFS
Homology
[Close]
BLAST of IVF0003617 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 3.6e-22
Identity = 88/404 (21.78%), Postives = 158/404 (39.11%), Query Frame = 0 

Query: 3    QTEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAH 62
            + ++V   + D+ L        K +E   +L+    I  + ++ +PN ++L   I+++ H
Sbjct: 861  KNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYH 920

Query: 63   SSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIFQQVKPVRQRPGGFLNPLPVP 122
                 +HPG   +   + + + W G++++I EYV  C   Q  K    +P G L P+P  
Sbjct: 921  EEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPS 980

Query: 123  EWKWEHITMDFLFGLPRTSSGHDGIW---------------------------------- 182
            E  WE ++MDF+  LP  SSG++ ++                                  
Sbjct: 981  ERPWESLSMDFITALPE-SSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIA 1040

Query: 183  ------------------------------------------------------DMLRAC 242
                                                                   +LR  
Sbjct: 1041 YFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCV 1100

Query: 243  VLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYG-RPCRTPVCWNEVGERKLVGPEL 302
                  +W  H+ L++ +YNN   S+  M P+E ++   P  +P+      ++     E 
Sbjct: 1101 CSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKT---DEN 1160

Query: 303  VQITTNNIKLIRENLRKAQDRQKSYADKRRRNL-EFQVGDQVFLKLSPWRGVIRFGRKGK 316
             Q T    + ++E+L     + K Y D + + + EFQ GD V +K +   G +   +  K
Sbjct: 1161 SQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTK-TGFLH--KSNK 1220

[Close]
BLAST of IVF0003617 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 3.6e-22
Identity = 88/404 (21.78%), Postives = 158/404 (39.11%), Query Frame = 0 

Query: 3    QTEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAH 62
            + ++V   + D+ L        K +E   +L+    I  + ++ +PN ++L   I+++ H
Sbjct: 861  KNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYH 920

Query: 63   SSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIFQQVKPVRQRPGGFLNPLPVP 122
                 +HPG   +   + + + W G++++I EYV  C   Q  K    +P G L P+P  
Sbjct: 921  EEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPS 980

Query: 123  EWKWEHITMDFLFGLPRTSSGHDGIW---------------------------------- 182
            E  WE ++MDF+  LP  SSG++ ++                                  
Sbjct: 981  ERPWESLSMDFITALPE-SSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIA 1040

Query: 183  ------------------------------------------------------DMLRAC 242
                                                                   +LR  
Sbjct: 1041 YFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCV 1100

Query: 243  VLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYG-RPCRTPVCWNEVGERKLVGPEL 302
                  +W  H+ L++ +YNN   S+  M P+E ++   P  +P+      ++     E 
Sbjct: 1101 CSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKT---DEN 1160

Query: 303  VQITTNNIKLIRENLRKAQDRQKSYADKRRRNL-EFQVGDQVFLKLSPWRGVIRFGRKGK 316
             Q T    + ++E+L     + K Y D + + + EFQ GD V +K +   G +   +  K
Sbjct: 1161 SQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTK-TGFLH--KSNK 1220

[Close]
BLAST of IVF0003617 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 3.6e-22
Identity = 88/404 (21.78%), Postives = 158/404 (39.11%), Query Frame = 0 

Query: 3    QTEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAH 62
            + ++V   + D+ L        K +E   +L+    I  + ++ +PN ++L   I+++ H
Sbjct: 861  KNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYH 920

Query: 63   SSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIFQQVKPVRQRPGGFLNPLPVP 122
                 +HPG   +   + + + W G++++I EYV  C   Q  K    +P G L P+P  
Sbjct: 921  EEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPS 980

Query: 123  EWKWEHITMDFLFGLPRTSSGHDGIW---------------------------------- 182
            E  WE ++MDF+  LP  SSG++ ++                                  
Sbjct: 981  ERPWESLSMDFITALPE-SSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIA 1040

Query: 183  ------------------------------------------------------DMLRAC 242
                                                                   +LR  
Sbjct: 1041 YFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCV 1100

Query: 243  VLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYG-RPCRTPVCWNEVGERKLVGPEL 302
                  +W  H+ L++ +YNN   S+  M P+E ++   P  +P+      ++     E 
Sbjct: 1101 CSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKT---DEN 1160

Query: 303  VQITTNNIKLIRENLRKAQDRQKSYADKRRRNL-EFQVGDQVFLKLSPWRGVIRFGRKGK 316
             Q T    + ++E+L     + K Y D + + + EFQ GD V +K +   G +   +  K
Sbjct: 1161 SQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTK-TGFLH--KSNK 1220

[Close]
BLAST of IVF0003617 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 3.6e-22
Identity = 88/404 (21.78%), Postives = 158/404 (39.11%), Query Frame = 0 

Query: 3    QTEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAH 62
            + ++V   + D+ L        K +E   +L+    I  + ++ +PN ++L   I+++ H
Sbjct: 861  KNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYH 920

Query: 63   SSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIFQQVKPVRQRPGGFLNPLPVP 122
                 +HPG   +   + + + W G++++I EYV  C   Q  K    +P G L P+P  
Sbjct: 921  EEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPS 980

Query: 123  EWKWEHITMDFLFGLPRTSSGHDGIW---------------------------------- 182
            E  WE ++MDF+  LP  SSG++ ++                                  
Sbjct: 981  ERPWESLSMDFITALPE-SSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIA 1040

Query: 183  ------------------------------------------------------DMLRAC 242
                                                                   +LR  
Sbjct: 1041 YFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCV 1100

Query: 243  VLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYG-RPCRTPVCWNEVGERKLVGPEL 302
                  +W  H+ L++ +YNN   S+  M P+E ++   P  +P+      ++     E 
Sbjct: 1101 CSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKT---DEN 1160

Query: 303  VQITTNNIKLIRENLRKAQDRQKSYADKRRRNL-EFQVGDQVFLKLSPWRGVIRFGRKGK 316
             Q T    + ++E+L     + K Y D + + + EFQ GD V +K +   G +   +  K
Sbjct: 1161 SQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTK-TGFLH--KSNK 1220

[Close]
BLAST of IVF0003617 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 3.6e-22
Identity = 88/404 (21.78%), Postives = 158/404 (39.11%), Query Frame = 0 

Query: 3    QTEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAH 62
            + ++V   + D+ L        K +E   +L+    I  + ++ +PN ++L   I+++ H
Sbjct: 861  KNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYH 920

Query: 63   SSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIFQQVKPVRQRPGGFLNPLPVP 122
                 +HPG   +   + + + W G++++I EYV  C   Q  K    +P G L P+P  
Sbjct: 921  EEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPS 980

Query: 123  EWKWEHITMDFLFGLPRTSSGHDGIW---------------------------------- 182
            E  WE ++MDF+  LP  SSG++ ++                                  
Sbjct: 981  ERPWESLSMDFITALPE-SSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIA 1040

Query: 183  ------------------------------------------------------DMLRAC 242
                                                                   +LR  
Sbjct: 1041 YFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCV 1100

Query: 243  VLQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYG-RPCRTPVCWNEVGERKLVGPEL 302
                  +W  H+ L++ +YNN   S+  M P+E ++   P  +P+      ++     E 
Sbjct: 1101 CSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKT---DEN 1160

Query: 303  VQITTNNIKLIRENLRKAQDRQKSYADKRRRNL-EFQVGDQVFLKLSPWRGVIRFGRKGK 316
             Q T    + ++E+L     + K Y D + + + EFQ GD V +K +   G +   +  K
Sbjct: 1161 SQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTK-TGFLH--KSNK 1220

[Close]
BLAST of IVF0003617 vs. ExPASy TrEMBL
Match: A0A5A7VQD2 (Putative Gag-pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2484G00150 PE=4 SV=1)

HSP 1 Score: 755.7 bits (1950), Expect = 9.2e-215
Identity = 381/449 (84.86%), Postives = 382/449 (85.08%), Query Frame = 0 

Query: 4    TEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHS 63
            TEIVRRQSEDSNLQKKFEKSKKGLEVEF+LRTDGAIVKQGRLCVPNISELKNAILEEAHS
Sbjct: 982  TEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHS 1041

Query: 64   SAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIFQQVKPVRQRPGGFLNPLPVPE 123
            SAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLI QQVKPVRQRPGGFLNPLPVPE
Sbjct: 1042 SAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPE 1101

Query: 124  WKWEHITMDFLFGLPRTSSGHDG-------------------------------IW---- 183
            WKWEHITMDFLFGLPRTSSGHD                                 W    
Sbjct: 1102 WKWEHITMDFLFGLPRTSSGHDDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKFWPSLQ 1161

Query: 184  -----------------------------DMLRACVLQLKGSWDTHLPLMEFAYNNNYQS 243
                                         DMLRACVLQLKGSWDTHLPLMEFAYNNNYQS
Sbjct: 1162 KAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACVLQLKGSWDTHLPLMEFAYNNNYQS 1221

Query: 244  SIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYA 303
            SIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYA
Sbjct: 1222 SIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQITTNNIKLIRENLRKAQDRQKSYA 1281

Query: 304  DKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIE 363
            DKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIE
Sbjct: 1282 DKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSPRYIGPYQITERVGPAAYRLELPIE 1341

Query: 364  LARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLSYVEEPVQILDRKEQVLRNKTIPLI 389
            LARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLSYVEEPVQILDRKEQVLRNKTIPLI
Sbjct: 1342 LARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLSYVEEPVQILDRKEQVLRNKTIPLI 1401

[Close]
BLAST of IVF0003617 vs. ExPASy TrEMBL
Match: A0A5A7U2V7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00630 PE=4 SV=1)

HSP 1 Score: 755.0 bits (1948), Expect = 1.6e-214
Identity = 383/473 (80.97%), Postives = 384/473 (81.18%), Query Frame = 0 

Query: 4    TEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHS 63
            TEIVRRQSEDSNLQKKFEKSKKGLEVEF+LRTDGAIVKQGRLCVPNISELKNAILEEAHS
Sbjct: 1076 TEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHS 1135

Query: 64   SAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIFQQVKPVRQRPGGFLNPLPVPE 123
            SAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLI QQVKPVRQRPGGFLNPLPVPE
Sbjct: 1136 SAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPE 1195

Query: 124  WKWEHITMDFLFGLPRTSSGHDGIW----------------------------------- 183
            WKWEHITMDFLFGLPRTSSGHDGIW                                   
Sbjct: 1196 WKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQ 1255

Query: 184  -----------------------------------------------------DMLRACV 243
                                                                 DMLRACV
Sbjct: 1256 YGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACV 1315

Query: 244  LQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ 303
            LQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ
Sbjct: 1316 LQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ 1375

Query: 304  ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSP 363
            ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSP
Sbjct: 1376 ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSP 1435

Query: 364  RYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLS 389
            RYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLS
Sbjct: 1436 RYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLS 1495

[Close]
BLAST of IVF0003617 vs. ExPASy TrEMBL
Match: A0A5D3BS67 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold509G00050 PE=4 SV=1)

HSP 1 Score: 755.0 bits (1948), Expect = 1.6e-214
Identity = 383/473 (80.97%), Postives = 384/473 (81.18%), Query Frame = 0 

Query: 4    TEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHS 63
            TEIVRRQSEDSNLQKKFEKSKKGLEVEF+LRTDGAIVKQGRLCVPNISELKNAILEEAHS
Sbjct: 1114 TEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHS 1173

Query: 64   SAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIFQQVKPVRQRPGGFLNPLPVPE 123
            SAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLI QQVKPVRQRPGGFLNPLPVPE
Sbjct: 1174 SAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPE 1233

Query: 124  WKWEHITMDFLFGLPRTSSGHDGIW----------------------------------- 183
            WKWEHITMDFLFGLPRTSSGHDGIW                                   
Sbjct: 1234 WKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQ 1293

Query: 184  -----------------------------------------------------DMLRACV 243
                                                                 DMLRACV
Sbjct: 1294 YGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACV 1353

Query: 244  LQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ 303
            LQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ
Sbjct: 1354 LQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ 1413

Query: 304  ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSP 363
            ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSP
Sbjct: 1414 ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSP 1473

Query: 364  RYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLS 389
            RYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLS
Sbjct: 1474 RYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLS 1533

[Close]
BLAST of IVF0003617 vs. ExPASy TrEMBL
Match: A0A5D3BHI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold115G00450 PE=4 SV=1)

HSP 1 Score: 755.0 bits (1948), Expect = 1.6e-214
Identity = 383/473 (80.97%), Postives = 384/473 (81.18%), Query Frame = 0 

Query: 4    TEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHS 63
            TEIVRRQSEDSNLQKKFEKSKKGLEVEF+LRTDGAIVKQGRLCVPNISELKNAILEEAHS
Sbjct: 1114 TEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHS 1173

Query: 64   SAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIFQQVKPVRQRPGGFLNPLPVPE 123
            SAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLI QQVKPVRQRPGGFLNPLPVPE
Sbjct: 1174 SAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPE 1233

Query: 124  WKWEHITMDFLFGLPRTSSGHDGIW----------------------------------- 183
            WKWEHITMDFLFGLPRTSSGHDGIW                                   
Sbjct: 1234 WKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQ 1293

Query: 184  -----------------------------------------------------DMLRACV 243
                                                                 DMLRACV
Sbjct: 1294 YGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACV 1353

Query: 244  LQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ 303
            LQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ
Sbjct: 1354 LQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ 1413

Query: 304  ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSP 363
            ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSP
Sbjct: 1414 ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSP 1473

Query: 364  RYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLS 389
            RYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLS
Sbjct: 1474 RYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLS 1533

[Close]
BLAST of IVF0003617 vs. ExPASy TrEMBL
Match: A0A5A7UUL6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold132G00090 PE=4 SV=1)

HSP 1 Score: 755.0 bits (1948), Expect = 1.6e-214
Identity = 383/473 (80.97%), Postives = 384/473 (81.18%), Query Frame = 0 

Query: 4    TEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHS 63
            TEIVRRQSEDSNLQKKFEKSKKGLEVEF+LRTDGAIVKQGRLCVPNISELKNAILEEAHS
Sbjct: 746  TEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHS 805

Query: 64   SAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIFQQVKPVRQRPGGFLNPLPVPE 123
            SAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLI QQVKPVRQRPGGFLNPLPVPE
Sbjct: 806  SAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPE 865

Query: 124  WKWEHITMDFLFGLPRTSSGHDGIW----------------------------------- 183
            WKWEHITMDFLFGLPRTSSGHDGIW                                   
Sbjct: 866  WKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQ 925

Query: 184  -----------------------------------------------------DMLRACV 243
                                                                 DMLRACV
Sbjct: 926  YGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACV 985

Query: 244  LQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ 303
            LQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ
Sbjct: 986  LQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ 1045

Query: 304  ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSP 363
            ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSP
Sbjct: 1046 ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSP 1105

Query: 364  RYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLS 389
            RYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLS
Sbjct: 1106 RYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLS 1165

[Close]
BLAST of IVF0003617 vs. NCBI nr
Match: KAA0053246.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 748 bits (1932), Expect = 2.04e-268
Identity = 383/473 (80.97%), Postives = 384/473 (81.18%), Query Frame = 0 

Query: 4   TEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHS 63
           TEIVRRQSEDSNLQKKFEKSKKGLEVEF+LRTDGAIVKQGRLCVPNISELKNAILEEAHS
Sbjct: 146 TEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHS 205

Query: 64  SAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIFQQVKPVRQRPGGFLNPLPVPE 123
           SAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLI QQVKPVRQRPGGFLNPLPVPE
Sbjct: 206 SAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPE 265

Query: 124 WKWEHITMDFLFGLPRTSSGHDGIW----------------------------------- 183
           WKWEHITMDFLFGLPRTSSGHDGIW                                   
Sbjct: 266 WKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQ 325

Query: 184 -----------------------------------------------------DMLRACV 243
                                                                DMLRACV
Sbjct: 326 YGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACV 385

Query: 244 LQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ 303
           LQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ
Sbjct: 386 LQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ 445

Query: 304 ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSP 363
           ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSP
Sbjct: 446 ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSP 505

Query: 364 RYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLS 388
           RYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLS
Sbjct: 506 RYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLS 565

[Close]
BLAST of IVF0003617 vs. NCBI nr
Match: KAA0059912.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 748 bits (1932), Expect = 1.56e-265
Identity = 383/473 (80.97%), Postives = 384/473 (81.18%), Query Frame = 0 

Query: 4   TEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHS 63
           TEIVRRQSEDSNLQKKFEKSKKGLEVEF+LRTDGAIVKQGRLCVPNISELKNAILEEAHS
Sbjct: 336 TEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHS 395

Query: 64  SAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIFQQVKPVRQRPGGFLNPLPVPE 123
           SAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLI QQVKPVRQRPGGFLNPLPVPE
Sbjct: 396 SAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPE 455

Query: 124 WKWEHITMDFLFGLPRTSSGHDGIW----------------------------------- 183
           WKWEHITMDFLFGLPRTSSGHDGIW                                   
Sbjct: 456 WKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQ 515

Query: 184 -----------------------------------------------------DMLRACV 243
                                                                DMLRACV
Sbjct: 516 YGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACV 575

Query: 244 LQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ 303
           LQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ
Sbjct: 576 LQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ 635

Query: 304 ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSP 363
           ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSP
Sbjct: 636 ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSP 695

Query: 364 RYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLS 388
           RYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLS
Sbjct: 696 RYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLS 755

[Close]
BLAST of IVF0003617 vs. NCBI nr
Match: TYK11053.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 746 bits (1925), Expect = 1.20e-264
Identity = 381/473 (80.55%), Postives = 384/473 (81.18%), Query Frame = 0 

Query: 4   TEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHS 63
           TEIVRRQSEDSNLQKKFEKSKKGLEVEF+LRTDGAIVKQGRLCVPNISELKNAILEEAHS
Sbjct: 324 TEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHS 383

Query: 64  SAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIFQQVKPVRQRPGGFLNPLPVPE 123
           SAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLI QQVKPVRQRPGGFLNPLPVPE
Sbjct: 384 SAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPE 443

Query: 124 WKWEHITMDFLFGLPRTSSGHDGIW----------------------------------- 183
           WKWEHITMDFLFGLPRTSSGHDGIW                                   
Sbjct: 444 WKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQ 503

Query: 184 -----------------------------------------------------DMLRACV 243
                                                                DMLRACV
Sbjct: 504 YGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACV 563

Query: 244 LQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ 303
           LQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ
Sbjct: 564 LQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ 623

Query: 304 ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSP 363
           ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSP
Sbjct: 624 ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSP 683

Query: 364 RYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLS 388
           RYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLS
Sbjct: 684 RYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLS 743

[Close]
BLAST of IVF0003617 vs. NCBI nr
Match: KAA0063131.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 748 bits (1932), Expect = 5.19e-264
Identity = 383/473 (80.97%), Postives = 384/473 (81.18%), Query Frame = 0 

Query: 4   TEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHS 63
           TEIVRRQSEDSNLQKKFEKSKKGLEVEF+LRTDGAIVKQGRLCVPNISELKNAILEEAHS
Sbjct: 441 TEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHS 500

Query: 64  SAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIFQQVKPVRQRPGGFLNPLPVPE 123
           SAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLI QQVKPVRQRPGGFLNPLPVPE
Sbjct: 501 SAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPE 560

Query: 124 WKWEHITMDFLFGLPRTSSGHDGIW----------------------------------- 183
           WKWEHITMDFLFGLPRTSSGHDGIW                                   
Sbjct: 561 WKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQ 620

Query: 184 -----------------------------------------------------DMLRACV 243
                                                                DMLRACV
Sbjct: 621 YGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACV 680

Query: 244 LQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ 303
           LQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ
Sbjct: 681 LQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ 740

Query: 304 ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSP 363
           ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSP
Sbjct: 741 ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSP 800

Query: 364 RYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLS 388
           RYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLS
Sbjct: 801 RYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLS 860

[Close]
BLAST of IVF0003617 vs. NCBI nr
Match: KAA0035090.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 748 bits (1932), Expect = 1.08e-262
Identity = 383/473 (80.97%), Postives = 384/473 (81.18%), Query Frame = 0 

Query: 4    TEIVRRQSEDSNLQKKFEKSKKGLEVEFKLRTDGAIVKQGRLCVPNISELKNAILEEAHS 63
            TEIVRRQSEDSNLQKKFEKSKKGLEVEF+LRTDGAIVKQGRLCVPNISELKNAILEEAHS
Sbjct: 535  TEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHS 594

Query: 64   SAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLIFQQVKPVRQRPGGFLNPLPVPE 123
            SAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLI QQVKPVRQRPGGFLNPLPVPE
Sbjct: 595  SAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPE 654

Query: 124  WKWEHITMDFLFGLPRTSSGHDGIW----------------------------------- 183
            WKWEHITMDFLFGLPRTSSGHDGIW                                   
Sbjct: 655  WKWEHITMDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQ 714

Query: 184  -----------------------------------------------------DMLRACV 243
                                                                 DMLRACV
Sbjct: 715  YGVPVSIVSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSERTIQTLEDMLRACV 774

Query: 244  LQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ 303
            LQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ
Sbjct: 775  LQLKGSWDTHLPLMEFAYNNNYQSSIGMAPYEALYGRPCRTPVCWNEVGERKLVGPELVQ 834

Query: 304  ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSP 363
            ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSP
Sbjct: 835  ITTNNIKLIRENLRKAQDRQKSYADKRRRNLEFQVGDQVFLKLSPWRGVIRFGRKGKLSP 894

Query: 364  RYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLS 388
            RYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLS
Sbjct: 895  RYIGPYQITERVGPAAYRLELPIELARIHDVFHVSMLRKYIPDPSHVLQDQPVELKEDLS 954

The following BLAST results are available for this feature:
BLAST of IVF0003617 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9UR073.6e-2221.78Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
P0CT413.6e-2221.78Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
P0CT343.6e-2221.78Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
P0CT353.6e-2221.78Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
P0CT363.6e-2221.78Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
BLAST of IVF0003617 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7VQD29.2e-21584.86Putative Gag-pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol... [more]
A0A5A7U2V71.6e-21480.97Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37... [more]
A0A5D3BS671.6e-21480.97Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold50... [more]
A0A5D3BHI11.6e-21480.97Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11... [more]
A0A5A7UUL61.6e-21480.97Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13... [more]
BLAST of IVF0003617 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0053246.12.04e-26880.97DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa][more]
KAA0059912.11.56e-26580.97reverse transcriptase [Cucumis melo var. makuwa][more]
TYK11053.11.20e-26480.55reverse transcriptase [Cucumis melo var. makuwa][more]
KAA0063131.15.19e-26480.97reverse transcriptase [Cucumis melo var. makuwa][more]
KAA0035090.11.08e-26280.97DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa][more]
BLAST of IVF0003617 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 214..241
NoneNo IPR availableGENE3D1.10.340.70coord: 10..106
e-value: 4.7E-17
score: 64.0
NoneNo IPR availablePANTHERPTHR46148:SF18IPP TRANSFERASEcoord: 149..383
NoneNo IPR availablePANTHERPTHR46148FAMILY NOT NAMEDcoord: 149..383
IPR041588Integrase zinc-binding domainPFAMPF17921Integrase_H2C2coord: 52..107
e-value: 2.9E-17
score: 62.5
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 144..231
e-value: 2.6E-11
score: 45.2
IPR016197Chromo-like domain superfamilySUPERFAMILY54160Chromo domain-likecoord: 301..381
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 117..187

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0003617.2IVF0003617.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0006508 proteolysis
biological_process GO:0006278 RNA-dependent DNA biosynthetic process
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003964 RNA-directed DNA polymerase activity
molecular_function GO:0008270 zinc ion binding