IVF0003537 (gene) Melon (IVF77) v1

Overview
NameIVF0003537
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Locationchr01: 6957575 .. 6958219 (+)
RNA-Seq ExpressionIVF0003537
SyntenyIVF0003537
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGTAGCAAGATATAATATTGAGAAGTTTGATGGTAAGGAAGATTTTACGTTTTGGAAAGCAAAGATCAAAGCTATCATTGACCAACAAAAGACATTCAAAGTTCTCTGGATCCTAAAAAGCTACTTGTAACAAATGACTTACAAGAAGAAAGAAACTATGAAAAATTCAACTTATGTTTCTATAATTCTCAACCTACGTGGCAATGTTCTAAGGAAGGTCATTGATAAAGAAACAACTTATGGAATGTGGAAGAAGTTAGATGAACTTTATCAGTTCAAAGACTTACCAAACTGTGTATACATGAGGGAAAGGTTCTTTACCTTTAAAATGGATAGCAACAAGTCATTGATAGAAAATCTTGGAGAGTTCAAAAAGTTATCGACTGATTTCGAGGACTTGGAAAACAAGATTGGTGATGAAAATGAATCATTCATTTTGCTAAACCACTTCCAAATGCATTTAAAGAAGTCAAAATGGCTCTCAAATATGGAAATTGGAAGCCAAGAAATCACCATCGATGATATTATTCCAGGGATAAAAACCAGAGAACTAGAGTTTAATACACAAAGAAGAGATAAAGTCAATACTGAAGGATTGTTCTCAAAGGGTAAGAGCAAAAACAACTATAAAAGAAACTAA

mRNA sequence

ATGGCAGTAGCAAGATATAATATTGAGAAGTTTGATGGTAAGGAAGATTTTACGTTTTGGAAAGCAAAGATCAAAGCTATCATTGACCAACAAAAGACATTCAAAAAGAAAGAAACTATGAAAAATTCAACTTATGTTTCTATAATTCTCAACCTACGTGGCAATGTTCTAAGGAAGGTCATTGATAAAGAAACAACTTATGGAATGTGGAAGAAGTTAGATGAACTTTATCAGTTCAAAGACTTACCAAACTGTGTATACATGAGGGAAAGGTTCTTTACCTTTAAAATGGATAGCAACAAGTCATTGATAGAAAATCTTGGAGAGTTCAAAAAGTTATCGACTGATTTCGAGGACTTGGAAAACAAGATTGGTGATGAAAATGAATCATTCATTTTGCTAAACCACTTCCAAATGCATTTAAAGAAGTCAAAATGGCTCTCAAATATGGAAATTGGAAGCCAAGAAATCACCATCGATGATATTATTCCAGGGATAAAAACCAGAGAACTAGAGTTTAATACACAAAGAAGAGATAAAGTCAATACTGAAGGATTGTTCTCAAAGGGTAAGAGCAAAAACAACTATAAAAGAAACTAA

Coding sequence (CDS)

ATGGCAGTAGCAAGATATAATATTGAGAAGTTTGATGGTAAGGAAGATTTTACGTTTTGGAAAGCAAAGATCAAAGCTATCATTGACCAACAAAAGACATTCAAAAAGAAAGAAACTATGAAAAATTCAACTTATGTTTCTATAATTCTCAACCTACGTGGCAATGTTCTAAGGAAGGTCATTGATAAAGAAACAACTTATGGAATGTGGAAGAAGTTAGATGAACTTTATCAGTTCAAAGACTTACCAAACTGTGTATACATGAGGGAAAGGTTCTTTACCTTTAAAATGGATAGCAACAAGTCATTGATAGAAAATCTTGGAGAGTTCAAAAAGTTATCGACTGATTTCGAGGACTTGGAAAACAAGATTGGTGATGAAAATGAATCATTCATTTTGCTAAACCACTTCCAAATGCATTTAAAGAAGTCAAAATGGCTCTCAAATATGGAAATTGGAAGCCAAGAAATCACCATCGATGATATTATTCCAGGGATAAAAACCAGAGAACTAGAGTTTAATACACAAAGAAGAGATAAAGTCAATACTGAAGGATTGTTCTCAAAGGGTAAGAGCAAAAACAACTATAAAAGAAACTAA

Protein sequence

MAVARYNIEKFDGKEDFTFWKAKIKAIIDQQKTFKKKETMKNSTYVSIILNLRGNVLRKVIDKETTYGMWKKLDELYQFKDLPNCVYMRERFFTFKMDSNKSLIENLGEFKKLSTDFEDLENKIGDENESFILLNHFQMHLKKSKWLSNMEIGSQEITIDDIIPGIKTRELEFNTQRRDKVNTEGLFSKGKSKNNYKRN
Homology
BLAST of IVF0003537 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.6e-13
Identity = 58/222 (26.13%), Postives = 107/222 (48.20%), Query Frame = 0

Query: 1   MAVARYNIEKFDGKEDFTFWKAKIKAIIDQQKTF-------KKKETMKNSTYV------- 60
           M+  +Y + KF+G   F+ W+ +++ ++ QQ          KK +TMK   +        
Sbjct: 1   MSGVKYEVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAA 60

Query: 61  -SIILNLRGNVLRKVIDKETTYGMWKKLDELYQFKDLPNCVYMRERFFTFKMDSNKSLIE 120
            +I L+L  +V+  +ID++T  G+W +L+ LY  K L N +Y++++ +   M    + + 
Sbjct: 61  SAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLS 120

Query: 121 NLGEFKKLSTDFEDLENKIGDENESFILLNHFQMHLKKSKWLSNMEIGSQEITIDDIIPG 180
           +L  F  L T   +L  KI +E+++ +LLN   +        + +  G   I + D+   
Sbjct: 121 HLNVFNGLITQLANLGVKIEEEDKAILLLN--SLPSSYDNLATTILHGKTTIELKDV--- 180

Query: 181 IKTRELEFNTQRRDKVNTEG--LFSKG------KSKNNYKRN 200
             T  L  N + R K   +G  L ++G      +S NNY R+
Sbjct: 181 --TSALLLNEKMRKKPENQGQALITEGRGRSYQRSSNNYGRS 215

BLAST of IVF0003537 vs. ExPASy TrEMBL
Match: A0A5D3CAI4 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1503G00330 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 5.7e-35
Identity = 82/122 (67.21%), Postives = 95/122 (77.87%), Query Frame = 0

Query: 69  MWKKLDELYQFKDLPNCVYMRERFFTFKMDSNKSLIENLGEFKKLSTDFEDLENKIGDEN 128
           MWKKLDELYQ KDLPN  Y+RERFFTFKMD NKSLIENLGEFKKLS+DF++L +KIGDEN
Sbjct: 1   MWKKLDELYQSKDLPNRAYVRERFFTFKMDDNKSLIENLGEFKKLSSDFKELGDKIGDEN 60

Query: 129 ESFILLNHFQMHLKKSKWLSNMEIGSQEITIDDIIPGIKTRELEFNTQRRDKVNTEGLFS 188
           ESFILLN      K+ K    +  G Q+IT   +I  I+TREL+ N+QRRD+ N EGLFS
Sbjct: 61  ESFILLNSLPEAYKEVKMA--LRYGRQKITTGGVISAIRTRELDLNSQRRDQSNGEGLFS 120

Query: 189 KG 191
           KG
Sbjct: 121 KG 120

BLAST of IVF0003537 vs. ExPASy TrEMBL
Match: A0A2P5CTT8 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_273130 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 5.0e-31
Identity = 79/212 (37.26%), Postives = 126/212 (59.43%), Query Frame = 0

Query: 1   MAVARYNIEKFDGKEDFTFWKAKIKAIIDQQKTFK---------------KKETMKNSTY 60
           M  ++  IEKFDGK DF  WK K+KA++ QQK  K               +KE +  + Y
Sbjct: 1   MGTSKIEIEKFDGKGDFNMWKKKMKAVLVQQKCAKVLGDASGLPETMKPSEKEELLETAY 60

Query: 61  VSIILNLRGNVLRKVIDKETTYGMWKKLDELYQFKDLPNCVYMRERFFTFKMDSNKSLIE 120
             +ILNL  NVLR+V +++T   +W KLD LY  K L N +Y++E+ F FKMDS KSL +
Sbjct: 61  SLLILNLADNVLRQVDEQDTAAKVWSKLDSLYLTKTLSNKIYLKEQLFGFKMDSTKSLED 120

Query: 121 NLGEFKKLSTDFEDLENKIGDENESFILLNHFQMHLKKSKWLSNMEIGSQEITIDDIIPG 180
           NL +FK+++    +++ KI DEN++ I+LN      K  K  S ++ G + +++DD++  
Sbjct: 121 NLDDFKRITVSLANIDEKINDENQAIIILNSLPESYKDLK--STIKYGRESLSLDDVLRA 180

Query: 181 IKTRELEFNTQRRDKVNTEGLFSKGKSKNNYK 198
           +++ +LE   ++R   N EGL  +G+++   K
Sbjct: 181 LRSHDLEVKIEKRS--NGEGLQVRGRTQKRDK 208

BLAST of IVF0003537 vs. ExPASy TrEMBL
Match: A0A5D3BAU2 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold506G00010 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 6.5e-31
Identity = 70/97 (72.16%), Postives = 83/97 (85.57%), Query Frame = 0

Query: 33  TFKKKETMKNSTYVSIILNLRGNVLRKVIDKETTYGMWKKLDELYQFKDLPNCVYMRERF 92
           T ++KETM+N  Y +I+LNL  NVL++VI +ETTYGMWKKL+ELYQ KDLPN  YMRERF
Sbjct: 2   TQEEKETMENVAYGAIVLNLSDNVLKEVIGEETTYGMWKKLEELYQSKDLPNRAYMRERF 61

Query: 93  FTFKMDSNKSLIENLGEFKKLSTDFEDLENKIGDENE 130
            T+KMD NKSLIENLGEFKKLS DF +L++KIGDENE
Sbjct: 62  LTYKMDDNKSLIENLGEFKKLSLDFRELKDKIGDENE 98

BLAST of IVF0003537 vs. ExPASy TrEMBL
Match: A0A5A7U6R2 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold333G00930 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.9e-30
Identity = 76/212 (35.85%), Postives = 121/212 (57.08%), Query Frame = 0

Query: 1   MAVARYNIEKFDGKEDFTFWKAKIKAIIDQQKTFK---------------KKETMKNSTY 60
           M   ++ IEKFDG  DFT W  +I AI+  QK  K               ++ET++   Y
Sbjct: 1   MTTTKFEIEKFDGNGDFTLWTKRITAILGSQKALKALEDPKELPATLTKSERETLEEVAY 60

Query: 61  VSIILNLRGNVLRKVIDKETTYGMWKKLDELYQFKDLPNCVYMRERFFTFKMDSNKSLIE 120
            ++I+N+  NVLR+VI++ T +  W+KL  LY+ KDLPN ++++E+ F+FK + NK+L E
Sbjct: 61  STLIMNITDNVLRQVIEETTAFATWEKLKSLYEKKDLPNKMFIKEKLFSFKKNQNKNLDE 120

Query: 121 NLGEFKKLSTDFEDLENKIGDENESFILLNHFQMHLKKSKWLSNMEIGSQEITIDDIIPG 180
           NL EFKKL+        K+G ENE+ IL+N      K+ K  + ++ G + IT++ +I  
Sbjct: 121 NLDEFKKLTNALNQTGEKLGAENEAAILINSIHDTYKEVK--TGLKYGRETITVNSVITT 180

Query: 181 IKTRELEFNTQRRDKVNTEGLFSKGKSKNNYK 198
           +K++ELE  T+ +     EG   +      Y+
Sbjct: 181 LKSKELELKTENKTSNAAEGKNFRRDENRRYR 210

BLAST of IVF0003537 vs. ExPASy TrEMBL
Match: A0A5C7GPM1 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_027990 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 5.5e-30
Identity = 78/204 (38.24%), Postives = 121/204 (59.31%), Query Frame = 0

Query: 5   RYNIEKFDGKEDFTFWKAKIKAIIDQQKTFK---------------KKETMKNSTYVSII 64
           ++ I+KFDG EDF  W+ K+KA++ QQK  K               +K  M      +II
Sbjct: 83  KFEIDKFDGTEDFGIWRRKVKALLSQQKILKAIEGPDKLPDSLNDEQKSDMLEMALRTII 142

Query: 65  LNLRGNVLRKVIDKETTYGMWKKLDELYQFKDLPNCVYMRERFFTFKMDSNKSLIENLGE 124
           LNL  NVLR+V D+ T YG+W KL+ LY  K L N +Y++ER F+FKMD++K L +NL E
Sbjct: 143 LNLSDNVLREVNDETTAYGVWNKLESLYMTKSLTNKIYLKERLFSFKMDASKGLDKNLDE 202

Query: 125 FKKLSTDFEDLEN--KIGDENESFILLNHFQMHLKKSKWLSNMEIGSQEITIDDIIPGIK 184
           +KK++ +  +  +  K+ DENE+ ILLN      K  K  + ++ G   +++++ I  +K
Sbjct: 203 YKKMTIELANASDNEKLSDENEAIILLNSLPDSFKDVK--AAIKYGRTSLSLEECISALK 262

Query: 185 TRELEFNTQRRDKVNTEGLFSKGK 192
           ++ELE   +++D  N E LF  G+
Sbjct: 263 SKELELKIEKKD--NGENLFVSGR 282

BLAST of IVF0003537 vs. NCBI nr
Match: XP_038890043.1 (uncharacterized protein LOC120079747 [Benincasa hispida])

HSP 1 Score: 176 bits (447), Expect = 4.49e-52
Identity = 95/212 (44.81%), Postives = 134/212 (63.21%), Query Frame = 0

Query: 1   MAVARYNIEKFDGKEDFTFWKAKIKAIIDQQK---------------TFKKKETMKNSTY 60
           MA  RY IEKFD K DF  WK KIK ++ QQK               T  +KET++ +  
Sbjct: 1   MATTRYEIEKFDSKTDFELWKVKIKVVLGQQKALLAITDPAKYPETLTEAEKETIEVNAC 60

Query: 61  VSIILNLRGNVLRKVIDKETTYGMWKKLDELYQFKDLPNCVYMRERFFTFKMDSNKSLIE 120
            +I+LN+  NVLR+VI++ T Y +W KL+E+Y  KDL N  ++RERFFT+KMD+ KSL +
Sbjct: 61  GTIVLNVTDNVLRQVINQPTAYALWNKLNEIYLNKDLSNKAFLRERFFTYKMDAAKSLTD 120

Query: 121 NLGEFKKLSTDFEDLENKIGDENESFILLNHFQMHLKKSKWLSNMEIGSQEITIDDIIPG 180
            L EFK+LS++F  +   IG+ENE+FILLN      K +K  + ++ G + IT + II  
Sbjct: 121 ILNEFKRLSSEFRSIGYNIGEENEAFILLNSLPESFKDAK--TAIKYGRERITTEAIISA 180

Query: 181 IKTRELEFNTQRRDKVNTEGLFSKGKSKNNYK 197
           ++ RELE    ++ +   EGLFSKGK+KN+ K
Sbjct: 181 VRVRELELQMSKKGQQEGEGLFSKGKNKNSRK 210

BLAST of IVF0003537 vs. NCBI nr
Match: XP_038885928.1 (uncharacterized protein LOC120076236 [Benincasa hispida])

HSP 1 Score: 172 bits (436), Expect = 9.26e-50
Identity = 90/208 (43.27%), Postives = 130/208 (62.50%), Query Frame = 0

Query: 1   MAVARYNIEKFDGKEDFTFWKAKIKAIIDQQKT--------------FK-KKETMKNSTY 60
           M   RY IEKF+ K DF  WKAKIK ++ +QK               FK +KET++++ Y
Sbjct: 1   MTTTRYEIEKFEAKTDFELWKAKIKVVLRKQKALLAITDPAKYPKILFKAEKETIESNAY 60

Query: 61  VSIILNLRGNVLRKVIDKETTYGMWKKLDELYQFKDLPNCVYMRERFFTFKMDSNKSLIE 120
            +I+LN+  +VLR+++D+ T Y +W KL+++Y  KDLPN  ++RERFFT+KMD  KSL +
Sbjct: 61  GTIVLNVIDSVLRQIVDRPTAYALWNKLNDIYLNKDLPNKAFLRERFFTYKMDPAKSLTD 120

Query: 121 NLGEFKKLSTDFEDLENKIGDENESFILLNHFQMHLKKSKWLSNMEIGSQEITIDDIIPG 180
           NL EFK LS+DF  + + IG+ENE+FILLN      K  K  + ++ G + IT   II  
Sbjct: 121 NLNEFKSLSSDFRSIGDNIGEENEAFILLNSLPETFKDVK--TALKYGRERITTYAIISA 180

Query: 181 IKTRELEFNTQRRDKVNTEGLFSKGKSK 193
           +  +ELE    ++D+   EG F KG +K
Sbjct: 181 VSVKELELQMTKKDQPRGEGFFPKGNNK 206

BLAST of IVF0003537 vs. NCBI nr
Match: KAA0065687.1 (retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK08214.1 retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 159 bits (402), Expect = 4.38e-45
Identity = 82/122 (67.21%), Postives = 95/122 (77.87%), Query Frame = 0

Query: 69  MWKKLDELYQFKDLPNCVYMRERFFTFKMDSNKSLIENLGEFKKLSTDFEDLENKIGDEN 128
           MWKKLDELYQ KDLPN  Y+RERFFTFKMD NKSLIENLGEFKKLS+DF++L +KIGDEN
Sbjct: 1   MWKKLDELYQSKDLPNRAYVRERFFTFKMDDNKSLIENLGEFKKLSSDFKELGDKIGDEN 60

Query: 129 ESFILLNHFQMHLKKSKWLSNMEIGSQEITIDDIIPGIKTRELEFNTQRRDKVNTEGLFS 188
           ESFILLN      K+ K    +  G Q+IT   +I  I+TREL+ N+QRRD+ N EGLFS
Sbjct: 61  ESFILLNSLPEAYKEVKMA--LRYGRQKITTGGVISAIRTRELDLNSQRRDQSNGEGLFS 120

Query: 189 KG 190
           KG
Sbjct: 121 KG 120

BLAST of IVF0003537 vs. NCBI nr
Match: XP_038887098.1 (uncharacterized protein LOC120077280 [Benincasa hispida])

HSP 1 Score: 157 bits (396), Expect = 2.63e-44
Identity = 83/188 (44.15%), Postives = 119/188 (63.30%), Query Frame = 0

Query: 1   MAVARYNIEKFDGKEDFTFWKAKIKAIIDQQKTF---------------KKKETMKNSTY 60
           MA  +Y IEKFD K DF   KAKIKA++ QQK                  +KET++++ Y
Sbjct: 1   MATTKYEIEKFDEKIDFELRKAKIKAVLGQQKALLAITDPSKYPETLSEAEKETIESNAY 60

Query: 61  VSIILNLRGNVLRKVIDKETTYGMWKKLDELYQFKDLPNCVYMRERFFTFKMDSNKSLIE 120
            +IILN+  +VLR+++D+ T Y +W KL+E+Y  KD PN  ++RERFFT+KMD  KSL +
Sbjct: 61  GTIILNVTDSVLRQIMDQPTVYALWNKLNEIYLNKDFPNKNFLRERFFTYKMDPTKSLTD 120

Query: 121 NLGEFKKLSTDFEDLENKIGDENESFILLNHFQMHLKKSKWLSNMEIGSQEITIDDIIPG 173
           NL EFK+LS++F  + + IG+ENE+FIL N      K  K  + ++   + ITID II  
Sbjct: 121 NLNEFKRLSSEFRSIGDNIGEENEAFILFNSLPETFKDVK--TALKYSRKRITIDAIISA 180

BLAST of IVF0003537 vs. NCBI nr
Match: XP_038880370.1 (uncharacterized protein LOC120072018 [Benincasa hispida])

HSP 1 Score: 150 bits (378), Expect = 3.60e-42
Identity = 79/173 (45.66%), Postives = 111/173 (64.16%), Query Frame = 0

Query: 1   MAVARYNIEKFDGKEDFTFWKAKIKAIIDQQKTF---------------KKKETMKNSTY 60
           MA  RY IEKFDGK DF   KAKIKA++ QQKT                  KET++ + Y
Sbjct: 1   MATIRYEIEKFDGKIDFELQKAKIKAVLGQQKTLLAITDPTKYPETLSEADKETIELNAY 60

Query: 61  VSIILNLRGNVLRKVIDKETTYGMWKKLDELYQFKDLPNCVYMRERFFTFKMDSNKSLIE 120
            +IILN+  ++LR+++D+ T Y +W KL+E+Y  KDLPN  + RERFFT+K+D+ KSL +
Sbjct: 61  GTIILNVTDSILRQIVDQPTAYALWNKLNEIYLNKDLPNKAFFRERFFTYKIDAAKSLTD 120

Query: 121 NLGEFKKLSTDFEDLENKIGDENESFILLNHFQMHLKKSKWLSNMEIGSQEIT 158
           NL EFK+LS++F  + + I +ENE+FILLN      K  K +  ++ G + IT
Sbjct: 121 NLNEFKRLSSEFRSIRDNIREENEAFILLNSLPESFKDVKTI--LKYGRERIT 171

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P109782.6e-1326.13Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
Match NameE-valueIdentityDescription
A0A5D3CAI45.7e-3567.21Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A2P5CTT85.0e-3137.26Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_273130 PE=4 SV... [more]
A0A5D3BAU26.5e-3172.16Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5A7U6R21.9e-3035.85Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5C7GPM15.5e-3038.24Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_027990 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_038890043.14.49e-5244.81uncharacterized protein LOC120079747 [Benincasa hispida][more]
XP_038885928.19.26e-5043.27uncharacterized protein LOC120076236 [Benincasa hispida][more]
KAA0065687.14.38e-4567.21retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
XP_038887098.12.63e-4444.15uncharacterized protein LOC120077280 [Benincasa hispida][more]
XP_038880370.13.60e-4245.66uncharacterized protein LOC120072018 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 41..163
e-value: 1.5E-15
score: 57.2
NoneNo IPR availablePANTHERPTHR34676FAMILY NOT NAMEDcoord: 9..127
NoneNo IPR availablePANTHERPTHR34676:SF12ZINC FINGER, CCHC-TYPE, RIBONUCLEASE H-LIKE DOMAIN, GAG-PRE-INTEGRASE DOMAIN PROTEIN-RELATEDcoord: 9..127

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0003537.1IVF0003537.1mRNA