IVF0003515 (gene) Melon (IVF77) v1

Overview
NameIVF0003515
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCACTA en-spm transposon protein
Locationchr09: 13511631 .. 13512403 (+)
RNA-Seq ExpressionIVF0003515
SyntenyIVF0003515
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAGTAAGATAGATTGTAAGGTAGTGTTGTTGGAAGGGGTGGGTAGGATGCGAAGGTTGAAGTTGTTTGTGGTTAATAATTAGGTTGTGTTGGCTATCCTGCAGTTATGGTAGGCTCTGTAGTTTGAAGTTAGTTTTAGTGAAAATTTGAAAGATTGTATATTCAGAGGAGAGGATGTGAGAGGAGAGGAATATGTTTCTAATCAAACCTATTTATGTTTTAGGGACTTAAACGATGGACAAAGGTTGATGAAACTTAGGAATAAGTTTTTCCTTGAGTATAGAGAGGGAGTGACCCAATTTTTAGAATTTGTCAAGTTTCACGTTGATGCTTATGGACGAATTAAGGTGTCCATGCGAGAGATGTATGAACTTAAATTGGAACTCACTAGAGGGTGTGGAATGATATCTACTGACTATTGGAATATCCCCTACTACACAGAATGGGTGTATCATGGAGAGTCATTAAGCTTTAGAGGTATAGAAAACTTTAAGGAAGGAACTAGTAGTAACCCTTTTGATGAAGAAACTAGTAGTAGGCAGTTTGATGAAGAAGACGATATGTTTGGTATGTTGAATGATTTAGAAGTCCCGATTGAACAGGAAGAGAAAACGGAGGAAGGCCGTTTGGAAGATGAAATGCCGAGGAATATTAGGGTAGATATAAATGAAGATACAACAAACATATTTCAAAACTTATTGAATGAAGCACGTAATGAGTTGTACCCTGATTGTTCTGAATTTTCGTCCTTGAATTTTTTGGTTAGTTGA

mRNA sequence

ATGGTAGTTGTGTTGGCTATCCTGCAGTTATGGGACTTAAACGATGGACAAAGGTTGATGAAACTTAGGAATAAGTTTTTCCTTGAGTATAGAGAGGGAGTGACCCAATTTTTAGAATTTGTCAAGTTTCACGTTGATGCTTATGGACGAATTAAGGTGTCCATGCGAGAGATGTATGAACTTAAATTGGAACTCACTAGAGGGTGTGGAATGATATCTACTGACTATTGGAATATCCCCTACTACACAGAATGGGTGTATCATGGAGAGTCATTAAGCTTTAGAGGTATAGAAAACTTTAAGGAAGGAACTAGTAGTAACCCTTTTGATGAAGAAACTAGTAGTAGGCAGTTTGATGAAGAAGACGATATGTTTGGTATGTTGAATGATTTAGAAGTCCCGATTGAACAGGAAGAGAAAACGGAGGAAGGCCGTTTGGAAGATGAAATGCCGAGGAATATTAGGGTAGATATAAATGAAGATACAACAAACATATTTCAAAACTTATTGAATGAAGCACGTAATGAGTTGTACCCTGATTGTTCTGAATTTTCGTCCTTGAATTTTTTGGTTAGTTGA

Coding sequence (CDS)

ATGGTAGTTGTGTTGGCTATCCTGCAGTTATGGGACTTAAACGATGGACAAAGGTTGATGAAACTTAGGAATAAGTTTTTCCTTGAGTATAGAGAGGGAGTGACCCAATTTTTAGAATTTGTCAAGTTTCACGTTGATGCTTATGGACGAATTAAGGTGTCCATGCGAGAGATGTATGAACTTAAATTGGAACTCACTAGAGGGTGTGGAATGATATCTACTGACTATTGGAATATCCCCTACTACACAGAATGGGTGTATCATGGAGAGTCATTAAGCTTTAGAGGTATAGAAAACTTTAAGGAAGGAACTAGTAGTAACCCTTTTGATGAAGAAACTAGTAGTAGGCAGTTTGATGAAGAAGACGATATGTTTGGTATGTTGAATGATTTAGAAGTCCCGATTGAACAGGAAGAGAAAACGGAGGAAGGCCGTTTGGAAGATGAAATGCCGAGGAATATTAGGGTAGATATAAATGAAGATACAACAAACATATTTCAAAACTTATTGAATGAAGCACGTAATGAGTTGTACCCTGATTGTTCTGAATTTTCGTCCTTGAATTTTTTGGTTAGTTGA

Protein sequence

MVVVLAILQLWDLNDGQRLMKLRNKFFLEYREGVTQFLEFVKFHVDAYGRIKVSMREMYELKLELTRGCGMISTDYWNIPYYTEWVYHGESLSFRGIENFKEGTSSNPFDEETSSRQFDEEDDMFGMLNDLEVPIEQEEKTEEGRLEDEMPRNIRVDINEDTTNIFQNLLNEARNELYPDCSEFSSLNFLVS
Homology
[Close]
BLAST of IVF0003515 vs. ExPASy TrEMBL
Match: A0A5A7V2I6 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G003540 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 2.9e-76
Identity = 145/149 (97.32%), Postives = 146/149 (97.99%), Query Frame = 0 

Query: 7   ILQLWDLNDGQRLMKLRNKFFLEYREGVTQFLEFVKFHVDAYGRIKVSMREMYELKLELT 66
           +  L DLNDGQRLMKLRNKFFLEYREGVTQFLEFVKFHVDAYGRIKVSMREMYELKLELT
Sbjct: 63  LCSLKDLNDGQRLMKLRNKFFLEYREGVTQFLEFVKFHVDAYGRIKVSMREMYELKLELT 122

Query: 67  RGCGMISTDYWNIPYYTEWVYHGESLSFRGIENFKEGTSSNPFDEETSSRQFDEEDDMFG 126
           RGCGMISTDYWNIPYYTEWVYHGESLSFRGIENFKEGTSSNPFDEETSSRQFDEEDDMFG
Sbjct: 123 RGCGMISTDYWNIPYYTEWVYHGESLSFRGIENFKEGTSSNPFDEETSSRQFDEEDDMFG 182

Query: 127 MLNDLEVPIEQEEKTEEGRLEDEMPRNIR 156
           MLNDLEVPIEQEEKTEEGRLEDEMPRNIR
Sbjct: 183 MLNDLEVPIEQEEKTEEGRLEDEMPRNIR 211

[Close]
BLAST of IVF0003515 vs. ExPASy TrEMBL
Match: A0A5A7UMP4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold186G001050 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 3.1e-54
Identity = 116/173 (67.05%), Postives = 131/173 (75.72%), Query Frame = 0 

Query: 20  MKLRNKFFLEYREGVTQFLEFVKFHVDAYGRIKVSMREMYELKLELTRGCGMISTDYWNI 79
           MKLRNK  LEYR GVTQFLEF KFHVDAYGR++   +    L      G           
Sbjct: 6   MKLRNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGIS 65

Query: 80  PYYTEWVYHGESLSFRGIENFKEGTSSNPFDEETSSRQFDEEDDMFGMLNDLEVPIEQEE 139
           PYY EWVYHGESLS+RG ENF+EGTSSNPF+E TSS QF+EE D+FGMLNDL+ PIE EE
Sbjct: 66  PYYIEWVYHGESLSYRGTENFEEGTSSNPFNEGTSSTQFNEEGDIFGMLNDLQAPIEHEE 125

Query: 140 KTEEGRLEDEMPRNIRVDINEDTT-NIFQNLLNEARNELYPDCSEFSSLNFLV 192
           + EE RLEDEM  N+ V+I+EDTT NIFQ+LLN+ARNELYP CSEFSSLNFLV
Sbjct: 126 EIEEFRLEDEMAMNVGVNIDEDTTNNIFQDLLNQARNELYPGCSEFSSLNFLV 178

[Close]
BLAST of IVF0003515 vs. ExPASy TrEMBL
Match: A0A5D3D5X7 (Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold418G00580 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 2.1e-50
Identity = 108/163 (66.26%), Postives = 124/163 (76.07%), Query Frame = 0 

Query: 30  YREGVTQFLEFVKFHVDAYGRIKVSMREMYELKLELTRGCGMISTDYWNIPYYTEWVYHG 89
           +R GVTQFLEF KFHVDAYGR++   +    L      G           PYYTEWVYHG
Sbjct: 90  FRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGISPYYTEWVYHG 149

Query: 90  ESLSFRGIENFKEGTSSNPFDEETSSRQFDEEDDMFGMLNDLEVPIEQEEKTEEGRLEDE 149
           ESLS+RG ENF+EGTSSNPF+E TSS QF+EE D+FGMLNDL+ PIE EE+ EE RLEDE
Sbjct: 150 ESLSYRGTENFEEGTSSNPFNEGTSSTQFNEEGDIFGMLNDLQAPIEHEEEIEEFRLEDE 209

Query: 150 MPRNIRVDINEDTT-NIFQNLLNEARNELYPDCSEFSSLNFLV 192
           M  N+ V+I+EDTT NIFQ+LLN+ARNELYP CSEFSSLNFLV
Sbjct: 210 MAMNVGVNIDEDTTNNIFQDLLNQARNELYPGCSEFSSLNFLV 252

[Close]
BLAST of IVF0003515 vs. ExPASy TrEMBL
Match: A0A5D3DS98 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14G001130 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 3.7e-47
Identity = 95/120 (79.17%), Postives = 108/120 (90.00%), Query Frame = 0 

Query: 55  MREMYELKLELTRGCGMISTDYWNIPYYTEWVYHGESLSFRGIENFKEGTSSNPFDEETS 114
           M+EM+E KLEL RGCG  STDYWN PYYTEWVYH ESLSF+G ENFKEGT+SNPFDEETS
Sbjct: 1   MQEMFEFKLELIRGCGTTSTDYWNTPYYTEWVYHRESLSFKGTENFKEGTNSNPFDEETS 60

Query: 115 SRQFDEEDDMFGMLNDLEVPIEQEEKTEEGRLEDEMPRNIRVDINEDTTNIFQNLLNEAR 174
           SRQF+EEDDMFGMLNDL+VPI+QEE+TE+ RLEDEM  N+ VDI+ED TNIFQ+LLNEA+
Sbjct: 61  SRQFNEEDDMFGMLNDLQVPIKQEEETEKRRLEDEMSMNVGVDIDEDRTNIFQDLLNEAQ 120

[Close]
BLAST of IVF0003515 vs. ExPASy TrEMBL
Match: A0A5D3DCW3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold609G00610 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 2.1e-42
Identity = 93/138 (67.39%), Postives = 108/138 (78.26%), Query Frame = 0 

Query: 55  MREMYELKLELTRGCGMISTDYWNIPYYTEWVYHGESLSFRGIENFKEGTSSNPFDEETS 114
           M+EM+E KLEL RGCG  STDYWNI            +  RG ENF+EGTSSN FD+ TS
Sbjct: 1   MQEMFEFKLELIRGCGTTSTDYWNILLLHRMSVSWRVIKLRGTENFEEGTSSNHFDKGTS 60

Query: 115 SRQFDEEDDMFGMLNDLEVPIEQEEKTEEGRLEDEMPRNIRVDINED-TTNIFQNLLNEA 174
           SRQF+EEDDMFGMLNDL+ PIE  E+T++G LEDE+  N+ VDI+ED T NIFQ+LLNEA
Sbjct: 61  SRQFNEEDDMFGMLNDLQAPIEHAEETDDGHLEDEISMNVEVDIDEDRTNNIFQDLLNEA 120

Query: 175 RNELYPDCSEFSSLNFLV 192
           RNELYPDCS+FSSLNFLV
Sbjct: 121 RNELYPDCSKFSSLNFLV 138

[Close]
BLAST of IVF0003515 vs. NCBI nr
Match: KAA0062293.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK26693.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 294 bits (753), Expect = 9.33e-94
Identity = 144/145 (99.31%), Postives = 144/145 (99.31%), Query Frame = 0 

Query: 12  DLNDGQRLMKLRNKFFLEYREGVTQFLEFVKFHVDAYGRIKVSMREMYELKLELTRGCGM 71
           DLNDGQRLMKLRNKFFLEYREGVTQFLEFVKFHVDAYGRIKVSMREMYELKLELTRGCGM
Sbjct: 68  DLNDGQRLMKLRNKFFLEYREGVTQFLEFVKFHVDAYGRIKVSMREMYELKLELTRGCGM 127

Query: 72  ISTDYWNIPYYTEWVYHGESLSFRGIENFKEGTSSNPFDEETSSRQFDEEDDMFGMLNDL 131
           ISTDYWNIPYYTEWVYHGESLSFRGIENFKEGTSSNPFDEETSSRQFDEEDDMFGMLNDL
Sbjct: 128 ISTDYWNIPYYTEWVYHGESLSFRGIENFKEGTSSNPFDEETSSRQFDEEDDMFGMLNDL 187

Query: 132 EVPIEQEEKTEEGRLEDEMPRNIRV 156
           EVPIEQEEKTEEGRLEDEMPRNIR 
Sbjct: 188 EVPIEQEEKTEEGRLEDEMPRNIRT 212

[Close]
BLAST of IVF0003515 vs. NCBI nr
Match: KAA0056368.1 (uncharacterized protein E6C27_scaffold186G001050 [Cucumis melo var. makuwa])

HSP 1 Score: 219 bits (559), Expect = 2.01e-62
Identity = 116/173 (67.05%), Postives = 131/173 (75.72%), Query Frame = 0 

Query: 20  MKLRNKFFLEYREGVTQFLEFVKFHVDAYGRIKVSMREMYELKLELTRGCGMISTDYWNI 79
           MKLRNK  LEYR GVTQFLEF KFHVDAYGR++   +    L      G           
Sbjct: 6   MKLRNKLSLEYRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGIS 65

Query: 80  PYYTEWVYHGESLSFRGIENFKEGTSSNPFDEETSSRQFDEEDDMFGMLNDLEVPIEQEE 139
           PYY EWVYHGESLS+RG ENF+EGTSSNPF+E TSS QF+EE D+FGMLNDL+ PIE EE
Sbjct: 66  PYYIEWVYHGESLSYRGTENFEEGTSSNPFNEGTSSTQFNEEGDIFGMLNDLQAPIEHEE 125

Query: 140 KTEEGRLEDEMPRNIRVDINEDTTN-IFQNLLNEARNELYPDCSEFSSLNFLV 191
           + EE RLEDEM  N+ V+I+EDTTN IFQ+LLN+ARNELYP CSEFSSLNFLV
Sbjct: 126 EIEEFRLEDEMAMNVGVNIDEDTTNNIFQDLLNQARNELYPGCSEFSSLNFLV 178

[Close]
BLAST of IVF0003515 vs. NCBI nr
Match: TYK18968.1 (uncharacterized protein E5676_scaffold418G00580 [Cucumis melo var. makuwa])

HSP 1 Score: 207 bits (528), Expect = 1.43e-58
Identity = 108/163 (66.26%), Postives = 124/163 (76.07%), Query Frame = 0 

Query: 30  YREGVTQFLEFVKFHVDAYGRIKVSMREMYELKLELTRGCGMISTDYWNIPYYTEWVYHG 89
           +R GVTQFLEF KFHVDAYGR++   +    L      G           PYYTEWVYHG
Sbjct: 90  FRHGVTQFLEFAKFHVDAYGRLRCPCKRCLNLNWSSLEGVERHLLTIGISPYYTEWVYHG 149

Query: 90  ESLSFRGIENFKEGTSSNPFDEETSSRQFDEEDDMFGMLNDLEVPIEQEEKTEEGRLEDE 149
           ESLS+RG ENF+EGTSSNPF+E TSS QF+EE D+FGMLNDL+ PIE EE+ EE RLEDE
Sbjct: 150 ESLSYRGTENFEEGTSSNPFNEGTSSTQFNEEGDIFGMLNDLQAPIEHEEEIEEFRLEDE 209

Query: 150 MPRNIRVDINEDTTN-IFQNLLNEARNELYPDCSEFSSLNFLV 191
           M  N+ V+I+EDTTN IFQ+LLN+ARNELYP CSEFSSLNFLV
Sbjct: 210 MAMNVGVNIDEDTTNNIFQDLLNQARNELYPGCSEFSSLNFLV 252

[Close]
BLAST of IVF0003515 vs. NCBI nr
Match: KAA0067094.1 (uncharacterized protein E6C27_scaffold38G001500 [Cucumis melo var. makuwa] >TYK26329.1 uncharacterized protein E5676_scaffold14G001130 [Cucumis melo var. makuwa])

HSP 1 Score: 196 bits (497), Expect = 6.79e-57
Identity = 95/120 (79.17%), Postives = 108/120 (90.00%), Query Frame = 0 

Query: 55  MREMYELKLELTRGCGMISTDYWNIPYYTEWVYHGESLSFRGIENFKEGTSSNPFDEETS 114
           M+EM+E KLEL RGCG  STDYWN PYYTEWVYH ESLSF+G ENFKEGT+SNPFDEETS
Sbjct: 1   MQEMFEFKLELIRGCGTTSTDYWNTPYYTEWVYHRESLSFKGTENFKEGTNSNPFDEETS 60

Query: 115 SRQFDEEDDMFGMLNDLEVPIEQEEKTEEGRLEDEMPRNIRVDINEDTTNIFQNLLNEAR 174
           SRQF+EEDDMFGMLNDL+VPI+QEE+TE+ RLEDEM  N+ VDI+ED TNIFQ+LLNEA+
Sbjct: 61  SRQFNEEDDMFGMLNDLQVPIKQEEETEKRRLEDEMSMNVGVDIDEDRTNIFQDLLNEAQ 120

[Close]
BLAST of IVF0003515 vs. NCBI nr
Match: KAA0051834.1 (uncharacterized protein E6C27_scaffold60G002600 [Cucumis melo var. makuwa] >TYK21412.1 uncharacterized protein E5676_scaffold609G00610 [Cucumis melo var. makuwa])

HSP 1 Score: 180 bits (457), Expect = 1.03e-51
Identity = 93/138 (67.39%), Postives = 108/138 (78.26%), Query Frame = 0 

Query: 55  MREMYELKLELTRGCGMISTDYWNIPYYTEWVYHGESLSFRGIENFKEGTSSNPFDEETS 114
           M+EM+E KLEL RGCG  STDYWNI            +  RG ENF+EGTSSN FD+ TS
Sbjct: 1   MQEMFEFKLELIRGCGTTSTDYWNILLLHRMSVSWRVIKLRGTENFEEGTSSNHFDKGTS 60

Query: 115 SRQFDEEDDMFGMLNDLEVPIEQEEKTEEGRLEDEMPRNIRVDINED-TTNIFQNLLNEA 174
           SRQF+EEDDMFGMLNDL+ PIE  E+T++G LEDE+  N+ VDI+ED T NIFQ+LLNEA
Sbjct: 61  SRQFNEEDDMFGMLNDLQAPIEHAEETDDGHLEDEISMNVEVDIDEDRTNNIFQDLLNEA 120

Query: 175 RNELYPDCSEFSSLNFLV 191
           RNELYPDCS+FSSLNFLV
Sbjct: 121 RNELYPDCSKFSSLNFLV 138

The following BLAST results are available for this feature:
BLAST of IVF0003515 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0003515 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7V2I62.9e-7697.32CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5A7UMP43.1e-5467.05Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3D5X72.1e-5066.26Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5D3DS983.7e-4779.17Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3DCW32.1e-4267.39Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of IVF0003515 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0062293.19.33e-9499.31CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK26693.1 CACTA en-... [more]
KAA0056368.12.01e-6267.05uncharacterized protein E6C27_scaffold186G001050 [Cucumis melo var. makuwa][more]
TYK18968.11.43e-5866.26uncharacterized protein E5676_scaffold418G00580 [Cucumis melo var. makuwa][more]
KAA0067094.16.79e-5779.17uncharacterized protein E6C27_scaffold38G001500 [Cucumis melo var. makuwa] >TYK2... [more]
KAA0051834.11.03e-5167.39uncharacterized protein E6C27_scaffold60G002600 [Cucumis melo var. makuwa] >TYK2... [more]
BLAST of IVF0003515 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0003515.2IVF0003515.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding