IVF0003406 (gene) Melon (IVF77) v1

Overview


Name	IVF0003406
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	mitochondrial import inner membrane translocase subunit Tim9
Location	chr04: 31253113 .. 31255451 (+)
RNA-Seq Expression	IVF0003406
Synteny	IVF0003406

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTTTTAGCTATTATAGGCGGCGATACAAAAAAAGAAACCAGAGAAGTTAAACCCTAAACCCTTTGCTTTTATTGGACTTGAAGATGGACAAGAACATGCTTGCTGATTTGGATGGGCTTCCTGAAGAAGATAAGATCAAAATGGCCACCATGATCGACCAGCTTCAGATCCGAGACAGGTTCTATTTACTTATCTAAAATATTTGAGTTTTGAAAATTAACTAATTTGTTGAATCGTTCTTTTGGTGTGTATGTTAGTTCTATCTGTACATGTTGTGGCGTGGTTGAAAGTTGTTTCTGGAATTTCTATCCTACATTTGATTTCAATATTATTAGTTGGGAGCGCTTTGAATTGCGCGAAAATTGATATTTACTACCTGATTAATTCACTTGGCCGATTTGTTGGGTTTGCTCGTTTCTCTGTAATATTTTTTTGGAGATATTTGGAATGCGTTTGGGTATCTTTAAATGAATAGTGGAAGGATTGGAAATTTTCTAGATACAGGTCAATTTGGGGGTAGCAATTTGGAAATTTGGTTTTGGGGGTTTGTGATTATGGTGCGACCAGAATAAGAGCTTAGGCCGCGGTACCGTAGCTTCAACGTCATTACGTGACATGCTCTGAGAAAGACTAAGCTACTTAAATTTCCTCCACCAGATTTTTGGGAGCTTATTTACTGTATTCTGCTTCTGTTTTTCTGTTTTTGTTTTTTTGGGCATAAGTCTTTTAGGGTGTAATTTATTATAATTCTGCTGATGTTTTACACCACCACCTTATAGATAACCATTCTGGTTTGACTTATTTAAGGGGATGGGTTCAAATTACAGTGGTTAATAAAGTATTTAATATTCTATGAATTACGTTAGCAACCAAATGTAGTTAGGTGATTTAAGTGCTCATGGCTATATATATTTTTATTTTTGAGAAAAGCCACAGATAGTATTGCTTATTGATTTTCTTTTCTGAATGATCGTGGTATTCTCTACTGACGATAGTCTATTCAGTGACCATGCACTCTGGCCATAGGAACTCAGGGGGTTCGTACCTCACAGCACCCCAAGTTAACCAACAGAGAGCTGCTCCTTTAGGATTTGCCTGGACAAGTTTTGTTGTTCGGAGCTGATCATAGAAATATCTCATCGGACCTATTATTTGCTCCTGAATTATTAGATAAACATGGTGGTTAATCTCAAAATGAATTGGCAATACAAGGAGTAGATCGTGTCTTTAAAAGACTATGAAGTTTCTTTCTTCTTTCCAACGTGGGATCCCAATATACCCCTCAAGATGGTGTCTATTTGGGTTCACCACTTTTGGGCTCACCACTTTTGGGTCGATTTTCATTTTTGAAAAAATTCAAATATCAAATTGGACTTCTTAAGATTTGATACCATATTCGATAAACACAAGGTTTCATTCTGAAACCATTTTTTTTTCAATGTGGAAGAATAGCCCATGTGTGTTTTTTTTTATTTTGAGGTCTCCCATTTTTTCAATATGGGATCCTCAATGTGAATATACTCTAAATAAGAGAACTAATGGTGTTCTAGGGGTGATCTTGATTTAATCAGTCTGATGAATGACAGTGTATTTTTCGAAGTTGAAGTAAGATGCCCATATATAATTTATATTGAAAAGAAGTCTTCAGAAGTTTATTATACAGCAGTTTGGAGCTCTTTTGCTTCTCCTTAATTTATGCTAGTATCCAATGCGTGATTTTTGTTATTTCTACGATTCTATTCTAATCTGGTCCCATGTTGTAAATTACTGCATATGACGGAATAAAGTGTTCGCCACAATAATATAAGAACACATTCATGGTCATAACTGTTTGCCTTCTAACTTGCAGTCTGAGAATGTACAACTCATTGGTCGAGAGATGCTTCACAGATTGTATCGATAACTTTCAGCGAAAATCCTTGACCAAACAAGAGGAAACATGTGTACGTAGGTGTGCCGAGAAGTTCTTGAAGCACTCAATGCGCGTTGGAATGAGATTTGCTGAGCTCAACCAAGGAGCCGCTACCTCAGATTAACGTTGCATGAGGACACTCTGGACATATTCTTGAGACCTTCAGTTCGGATTTTAGTATGTTTCTTCCATATCCTCGAGACCTTCAGTTCTTTTACCTCTGGAATTGTAGTATGTGTGTTCTTATTCTTGAAACCTTCACCTCTGAATTTATAGTATGTTTCTACATTATGTGTTACAACTGGGATTAAGTTGTAATTTCATTTGACTTATGAATTAAAGTTTTAGTAGCAGACTTCGAATAAATGTTTGAGGTTCCATATCCATCAGGATGATAACATATATTTACTCAAGCTTGTAACAA

mRNA sequence

AATTTTTTAGCTATTATAGGCGGCGATACAAAAAAAGAAACCAGAGAAGTTAAACCCTAAACCCTTTGCTTTTATTGGACTTGAAGATGGACAAGAACATGCTTGCTGATTTGGATGGGCTTCCTGAAGAAGATAAGATCAAAATGGCCACCATGATCGACCAGCTTCAGATCCGAGACAGTCTGAGAATGTACAACTCATTGGTCGAGAGATGCTTCACAGATTGTATCGATAACTTTCAGCGAAAATCCTTGACCAAACAAGAGGAAACATGTGTACGTAGGTGTGCCGAGAAGTTCTTGAAGCACTCAATGCGCGTTGGAATGAGATTTGCTGAGCTCAACCAAGGAGCCGCTACCTCAGATTAACGTTGCATGAGGACACTCTGGACATATTCTTGAGACCTTCAGTTCGGATTTTAGTATGTTTCTTCCATATCCTCGAGACCTTCAGTTCTTTTACCTCTGGAATTGTAGTATGTGTGTTCTTATTCTTGAAACCTTCACCTCTGAATTTATAGTATGTTTCTACATTATGTGTTACAACTGGGATTAAGTTGTAATTTCATTTGACTTATGAATTAAAGTTTTAGTAGCAGACTTCGAATAAATGTTTGAGGTTCCATATCCATCAGGATGATAACATATATTTACTCAAGCTTGTAACAA

Coding sequence (CDS)

ATGGACAAGAACATGCTTGCTGATTTGGATGGGCTTCCTGAAGAAGATAAGATCAAAATGGCCACCATGATCGACCAGCTTCAGATCCGAGACAGTCTGAGAATGTACAACTCATTGGTCGAGAGATGCTTCACAGATTGTATCGATAACTTTCAGCGAAAATCCTTGACCAAACAAGAGGAAACATGTGTACGTAGGTGTGCCGAGAAGTTCTTGAAGCACTCAATGCGCGTTGGAATGAGATTTGCTGAGCTCAACCAAGGAGCCGCTACCTCAGATTAA

Protein sequence

MDKNMLADLDGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

Homology

[Close]

BLAST of IVF0003406 vs. ExPASy Swiss-Prot
Match: Q9XGX8 (Mitochondrial import inner membrane translocase subunit Tim9 OS=Mesembryanthemum crystallinum OX=3544 GN=TIM9 PE=3 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 4.1e-41
Identity = 79/93 (84.95%), Postives = 90/93 (96.77%), Query Frame = 0


Query: 1  MDKNMLADLDGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQE 60
          MDKNML DLD LPEEDK+KMA+MI+QLQIRDSLRMYN+LVERCFTDC+D+F+RK+L KQE
Sbjct: 1  MDKNMLGDLDNLPEEDKLKMASMIEQLQIRDSLRMYNNLVERCFTDCVDSFRRKTLDKQE 60

Query: 61 ETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD 94
          ETCV+RCAEKFLKHSMRVG+RFAELNQGAAT+D
Sbjct: 61 ETCVKRCAEKFLKHSMRVGLRFAELNQGAATTD 93

[Close]

BLAST of IVF0003406 vs. ExPASy Swiss-Prot
Match: Q9XGX7 (Mitochondrial import inner membrane translocase subunit Tim9 OS=Oryza sativa subsp. japonica OX=39947 GN=TIM9 PE=3 SV=2)

HSP 1 Score: 167.2 bits (422), Expect = 9.1e-41
Identity = 79/93 (84.95%), Postives = 87/93 (93.55%), Query Frame = 0


Query: 1  MDKNMLADLDGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQE 60
          MDK+ML DLDGLPEEDK++MA M+DQLQIRDSLRMYNSLVERCFTDC+D F+RK+L KQE
Sbjct: 1  MDKSMLGDLDGLPEEDKMRMAAMVDQLQIRDSLRMYNSLVERCFTDCVDTFRRKTLDKQE 60

Query: 61 ETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD 94
          E+CVRRCAEKFLKHSMRVGMRFAELNQG AT D
Sbjct: 61 ESCVRRCAEKFLKHSMRVGMRFAELNQGVATPD 93

[Close]

BLAST of IVF0003406 vs. ExPASy Swiss-Prot
Match: Q9XGX9 (Mitochondrial import inner membrane translocase subunit TIM9 OS=Arabidopsis thaliana OX=3702 GN=TIM9 PE=1 SV=2)

HSP 1 Score: 157.9 bits (398), Expect = 5.5e-38
Identity = 76/93 (81.72%), Postives = 83/93 (89.25%), Query Frame = 0


Query: 1  MDKNMLADLDGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQE 60
          MD +M+A LDGLPEEDK KMA+MIDQLQ+RDSLRMYNSLVERCF DC+D+F RKSL KQE
Sbjct: 1  MDASMMAGLDGLPEEDKAKMASMIDQLQLRDSLRMYNSLVERCFVDCVDSFTRKSLQKQE 60

Query: 61 ETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD 94
          ETCV RCAEKFLKH+MRVGMRFAELNQ A T D
Sbjct: 61 ETCVMRCAEKFLKHTMRVGMRFAELNQNAPTQD 93

[Close]

BLAST of IVF0003406 vs. ExPASy Swiss-Prot
Match: P57745 (Mitochondrial import inner membrane translocase subunit Tim9 OS=Zygosaccharomyces bailii OX=4954 GN=TIM9 PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.1e-17
Identity = 38/78 (48.72%), Postives = 59/78 (75.64%), Query Frame = 0


Query: 9  LDGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCA 68
          +D L   ++ + + +I+  Q++D +R+Y++LVERCFTDC+++F    LT +E+TC+ RC+
Sbjct: 1  MDSLNPREQQEFSKLIEHKQMKDFMRLYSNLVERCFTDCVNDFTSSKLTSKEQTCISRCS 60

Query: 69 EKFLKHSMRVGMRFAELN 87
          EKFLKHS RVG+RF E N
Sbjct: 61 EKFLKHSERVGLRFQEQN 78

[Close]

BLAST of IVF0003406 vs. ExPASy Swiss-Prot
Match: O74700 (Mitochondrial import inner membrane translocase subunit TIM9 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TIM9 PE=1 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.8e-17
Identity = 37/78 (47.44%), Postives = 59/78 (75.64%), Query Frame = 0


Query: 9  LDGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCA 68
          +D L  +++ +   +++Q Q++D +R+Y++LVERCFTDC+++F    LT +E+TC+ +C+
Sbjct: 1  MDALNSKEQQEFQKVVEQKQMKDFMRLYSNLVERCFTDCVNDFTTSKLTNKEQTCIMKCS 60

Query: 69 EKFLKHSMRVGMRFAELN 87
          EKFLKHS RVG RF E N
Sbjct: 61 EKFLKHSERVGQRFQEQN 78

[Close]

BLAST of IVF0003406 vs. ExPASy TrEMBL
Match: A0A5D3DN53 (Mitochondrial import inner membrane translocase subunit Tim9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001680 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.8e-44
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1  MDKNMLADLDGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQE 60
          MDKNMLADLDGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQE
Sbjct: 1  MDKNMLADLDGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQE 60

Query: 61 ETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD 94
          ETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Sbjct: 61 ETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD 93

[Close]

BLAST of IVF0003406 vs. ExPASy TrEMBL
Match: A0A0A0LFK3 (zf-Tim10_DDP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G734240 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.8e-44
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1  MDKNMLADLDGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQE 60
          MDKNMLADLDGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQE
Sbjct: 1  MDKNMLADLDGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQE 60

Query: 61 ETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD 94
          ETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Sbjct: 61 ETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD 93

[Close]

BLAST of IVF0003406 vs. ExPASy TrEMBL
Match: A0A1S3B5G6 (mitochondrial import inner membrane translocase subunit Tim9 OS=Cucumis melo OX=3656 GN=LOC103486387 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.8e-44
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1  MDKNMLADLDGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQE 60
          MDKNMLADLDGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQE
Sbjct: 1  MDKNMLADLDGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQE 60

Query: 61 ETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD 94
          ETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Sbjct: 61 ETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD 93

[Close]

BLAST of IVF0003406 vs. ExPASy TrEMBL
Match: A0A6J1IZ98 (mitochondrial import inner membrane translocase subunit Tim9 OS=Cucurbita maxima OX=3661 GN=LOC111482033 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 3.5e-43
Identity = 90/93 (96.77%), Postives = 92/93 (98.92%), Query Frame = 0


Query: 1  MDKNMLADLDGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQE 60
          MDKNMLADL+GLPEEDK+KMATMIDQLQIRDSLRMYNSLVERCF DCIDNFQRKSLTKQE
Sbjct: 1  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCIDNFQRKSLTKQE 60

Query: 61 ETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD 94
          ETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Sbjct: 61 ETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD 93

[Close]

BLAST of IVF0003406 vs. ExPASy TrEMBL
Match: A0A6J1F3Y8 (mitochondrial import inner membrane translocase subunit Tim9 OS=Cucurbita moschata OX=3662 GN=LOC111441897 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 3.5e-43
Identity = 90/93 (96.77%), Postives = 92/93 (98.92%), Query Frame = 0


Query: 1  MDKNMLADLDGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQE 60
          MDKNMLADL+GLPEEDK+KMATMIDQLQIRDSLRMYNSLVERCF DCIDNFQRKSLTKQE
Sbjct: 1  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCIDNFQRKSLTKQE 60

Query: 61 ETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD 94
          ETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Sbjct: 61 ETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD 93

[Close]

BLAST of IVF0003406 vs. NCBI nr
Match: XP_004137789.1 (mitochondrial import inner membrane translocase subunit Tim9 [Cucumis sativus] >XP_008442550.1 PREDICTED: mitochondrial import inner membrane translocase subunit Tim9 [Cucumis melo] >XP_038902990.1 mitochondrial import inner membrane translocase subunit Tim9 [Benincasa hispida] >KAA0044090.1 Mitochondrial import inner membrane translocase subunit Tim9 [Cucumis melo var. makuwa] >KGN58871.1 hypothetical protein Csa_000826 [Cucumis sativus] >TYK25047.1 Mitochondrial import inner membrane translocase subunit Tim9 [Cucumis melo var. makuwa])

HSP 1 Score: 187 bits (475), Expect = 9.36e-60
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1  MDKNMLADLDGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQE 60
          MDKNMLADLDGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQE
Sbjct: 1  MDKNMLADLDGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQE 60

Query: 61 ETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD 93
          ETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Sbjct: 61 ETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD 93

[Close]

BLAST of IVF0003406 vs. NCBI nr
Match: XP_022934857.1 (mitochondrial import inner membrane translocase subunit Tim9 [Cucurbita moschata] >XP_022983427.1 mitochondrial import inner membrane translocase subunit Tim9 [Cucurbita maxima] >XP_023528173.1 mitochondrial import inner membrane translocase subunit Tim9 [Cucurbita pepo subsp. pepo] >KAG6580543.1 Mitochondrial import inner membrane translocase subunit Tim9, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017295.1 Mitochondrial import inner membrane translocase subunit Tim9 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 183 bits (464), Expect = 4.47e-58
Identity = 90/93 (96.77%), Postives = 92/93 (98.92%), Query Frame = 0


Query: 1  MDKNMLADLDGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQE 60
          MDKNMLADL+GLPEEDK+KMATMIDQLQIRDSLRMYNSLVERCF DCIDNFQRKSLTKQE
Sbjct: 1  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCIDNFQRKSLTKQE 60

Query: 61 ETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD 93
          ETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Sbjct: 61 ETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD 93

[Close]

BLAST of IVF0003406 vs. NCBI nr
Match: XP_022145535.1 (mitochondrial import inner membrane translocase subunit Tim9-like [Momordica charantia])

HSP 1 Score: 182 bits (461), Expect = 1.28e-57
Identity = 89/93 (95.70%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1  MDKNMLADLDGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQE 60
          MDK+MLADLDGLP+EDK+KMA+MIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQE
Sbjct: 1  MDKSMLADLDGLPDEDKLKMASMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQE 60

Query: 61 ETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD 93
          ETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Sbjct: 61 ETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD 93

[Close]

BLAST of IVF0003406 vs. NCBI nr
Match: PON38573.1 (Tim10/DDP family zinc finger [Parasponia andersonii] >PON76124.1 Tim10/DDP family zinc finger [Trema orientale])

HSP 1 Score: 177 bits (449), Expect = 8.69e-56
Identity = 87/93 (93.55%), Postives = 90/93 (96.77%), Query Frame = 0


Query: 1  MDKNMLADLDGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQE 60
          MDK MLADLD LPEEDK++M+TMIDQLQIRDSLRMYNSLVERCFTDCID FQRKSLTKQE
Sbjct: 1  MDKTMLADLDSLPEEDKLRMSTMIDQLQIRDSLRMYNSLVERCFTDCIDTFQRKSLTKQE 60

Query: 61 ETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD 93
          ETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Sbjct: 61 ETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD 93

[Close]

BLAST of IVF0003406 vs. NCBI nr
Match: KAE8099394.1 (hypothetical protein FH972_017379 [Carpinus fangiana])

HSP 1 Score: 174 bits (442), Expect = 1.02e-54
Identity = 85/93 (91.40%), Postives = 89/93 (95.70%), Query Frame = 0


Query: 1  MDKNMLADLDGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQE 60
          MDK MLADLD LPEEDK +M+TMIDQLQIRDSLRMYNSLVERCFTDC+D FQRKSLTKQE
Sbjct: 1  MDKTMLADLDSLPEEDKARMSTMIDQLQIRDSLRMYNSLVERCFTDCVDTFQRKSLTKQE 60

Query: 61 ETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD 93
          ETCVRRCAEKFLKHSMRVGMRFAELNQGAAT+D
Sbjct: 61 ETCVRRCAEKFLKHSMRVGMRFAELNQGAATTD 93

[Close]

BLAST of IVF0003406 vs. TAIR 10
Match: AT3G46560.1 (Tim10/DDP family zinc finger protein )

HSP 1 Score: 157.9 bits (398), Expect = 3.9e-39
Identity = 76/93 (81.72%), Postives = 83/93 (89.25%), Query Frame = 0


Query: 1  MDKNMLADLDGLPEEDKIKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQE 60
          MD +M+A LDGLPEEDK KMA+MIDQLQ+RDSLRMYNSLVERCF DC+D+F RKSL KQE
Sbjct: 1  MDASMMAGLDGLPEEDKAKMASMIDQLQLRDSLRMYNSLVERCFVDCVDSFTRKSLQKQE 60

Query: 61 ETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD 94
          ETCV RCAEKFLKH+MRVGMRFAELNQ A T D
Sbjct: 61 ETCVMRCAEKFLKHTMRVGMRFAELNQNAPTQD 93

The following BLAST results are available for this feature:

BLAST of IVF0003406 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XGX8	4.1e-41	84.95	Mitochondrial import inner membrane translocase subunit Tim9 OS=Mesembryanthemum...	[more]
Q9XGX7	9.1e-41	84.95	Mitochondrial import inner membrane translocase subunit Tim9 OS=Oryza sativa sub...	[more]
Q9XGX9	5.5e-38	81.72	Mitochondrial import inner membrane translocase subunit TIM9 OS=Arabidopsis thal...	[more]
P57745	1.1e-17	48.72	Mitochondrial import inner membrane translocase subunit Tim9 OS=Zygosaccharomyce...	[more]
O74700	1.8e-17	47.44	Mitochondrial import inner membrane translocase subunit TIM9 OS=Saccharomyces ce...	[more]

BLAST of IVF0003406 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DN53	1.8e-44	100.00	Mitochondrial import inner membrane translocase subunit Tim9 OS=Cucumis melo var...	[more]
A0A0A0LFK3	1.8e-44	100.00	zf-Tim10_DDP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G73424...	[more]
A0A1S3B5G6	1.8e-44	100.00	mitochondrial import inner membrane translocase subunit Tim9 OS=Cucumis melo OX=...	[more]
A0A6J1IZ98	3.5e-43	96.77	mitochondrial import inner membrane translocase subunit Tim9 OS=Cucurbita maxima...	[more]
A0A6J1F3Y8	3.5e-43	96.77	mitochondrial import inner membrane translocase subunit Tim9 OS=Cucurbita moscha...	[more]

BLAST of IVF0003406 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137789.1	9.36e-60	100.00	mitochondrial import inner membrane translocase subunit Tim9 [Cucumis sativus] >...	[more]
XP_022934857.1	4.47e-58	96.77	mitochondrial import inner membrane translocase subunit Tim9 [Cucurbita moschata...	[more]
XP_022145535.1	1.28e-57	95.70	mitochondrial import inner membrane translocase subunit Tim9-like [Momordica cha...	[more]
PON38573.1	8.69e-56	93.55	Tim10/DDP family zinc finger [Parasponia andersonii] >PON76124.1 Tim10/DDP famil...	[more]
KAE8099394.1	1.02e-54	91.40	hypothetical protein FH972_017379 [Carpinus fangiana]	[more]

BLAST of IVF0003406 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46560.1	3.9e-39	81.72	Tim10/DDP family zinc finger protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004217	Tim10-like	PFAM	PF02953	zf-Tim10_DDP	coord: 25..84 e-value: 1.3E-19 score: 69.5
IPR035427	Tim10-like domain superfamily	GENE3D	1.10.287.810	Mitochondrial import inner membrane translocase subunit tim13 like domains	coord: 7..91 e-value: 8.0E-25 score: 88.3
IPR035427	Tim10-like domain superfamily	SUPERFAMILY	144122	Tim10-like	coord: 28..89
None	No IPR available	PANTHER	PTHR13172	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM9B	coord: 1..93
None	No IPR available	PANTHER	PTHR13172:SF3	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM9	coord: 1..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0003406.1	IVF0003406.1	mRNA