IVF0003403 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAAAACCAGTACGGTTGTTTTTTTTATGTGCATTGTTGTTGTGGTGGGATCACTGCAATTCTCTAGGGCAGACATGACTGCTGAAAGGGACACTGAGATTGAGATGAGATCTAAGTTGTTGCAGAGCGAAATATCCAGCGTAATGCCTCAATTCAAATCATGTGTGGAAACCTGTGAGAAAGCATGCATCGCAAAAGACGGTGCCAACACATCGTGTCATTCTACATGTGATAAAGATTGCATGAAAAAGGAAGTTGTTGGTATCGTCTTGAATCTTTGA ATGGCAAAAACCAGTACGGTTGTTTTTTTTATGTGCATTGTTGTTGTGGTGGGATCACTGCAATTCTCTAGGGCAGACATGACTGCTGAAAGGGACACTGAGATTGAGATGAGATCTAAGTTGTTGCAGAGCGAAATATCCAGCGTAATGCCTCAATTCAAATCATGTGTGGAAACCTGTGAGAAAGCATGCATCGCAAAAGACGGTGCCAACACATCGTGTCATTCTACATGTGATAAAGATTGCATGAAAAAGGAAGTTGTTGGTATCGTCTTGAATCTTTGA ATGGCAAAAACCAGTACGGTTGTTTTTTTTATGTGCATTGTTGTTGTGGTGGGATCACTGCAATTCTCTAGGGCAGACATGACTGCTGAAAGGGACACTGAGATTGAGATGAGATCTAAGTTGTTGCAGAGCGAAATATCCAGCGTAATGCCTCAATTCAAATCATGTGTGGAAACCTGTGAGAAAGCATGCATCGCAAAAGACGGTGCCAACACATCGTGTCATTCTACATGTGATAAAGATTGCATGAAAAAGGAAGTTGTTGGTATCGTCTTGAATCTTTGA MAKTSTVVFFMCIVVVVGSLQFSRADMTAERDTEIEMRSKLLQSEISSVMPQFKSCVETCEKACIAKDGANTSCHSTCDKDCMKKEVVGIVLNL Homology
BLAST of IVF0003403 vs. ExPASy TrEMBL
Match: A0A5A7SXV7 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13030G00010 PE=4 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 4.6e-43 Identity = 93/94 (98.94%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of IVF0003403 vs. ExPASy TrEMBL
Match: A0A5A7T3F9 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold494G00090 PE=4 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 7.5e-38 Identity = 83/88 (94.32%), Postives = 86/88 (97.73%), Query Frame = 0
BLAST of IVF0003403 vs. ExPASy TrEMBL
Match: A0A5A7TDR1 (Carotenoid cleavage dioxygenase 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002630 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.9e-04 Identity = 36/93 (38.71%), Postives = 50/93 (53.76%), Query Frame = 0
BLAST of IVF0003403 vs. NCBI nr
Match: KAA0035393.1 (major pollen allergen Ole e 6-like [Cucumis melo var. makuwa]) HSP 1 Score: 182 bits (463), Expect = 6.82e-58 Identity = 93/94 (98.94%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of IVF0003403 vs. NCBI nr
Match: KAA0036015.1 (major pollen allergen Ole e 6-like [Cucumis melo var. makuwa]) HSP 1 Score: 165 bits (418), Expect = 5.84e-51 Identity = 83/88 (94.32%), Postives = 86/88 (97.73%), Query Frame = 0
BLAST of IVF0003403 vs. NCBI nr
Match: KAE8637567.1 (hypothetical protein CSA_017844, partial [Cucumis sativus]) HSP 1 Score: 77.0 bits (188), Expect = 7.89e-16 Identity = 41/89 (46.07%), Postives = 54/89 (60.67%), Query Frame = 0
BLAST of IVF0003403 vs. NCBI nr
Match: KAG6595593.1 (hypothetical protein SDJN03_12146, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 67.0 bits (162), Expect = 3.88e-12 Identity = 41/87 (47.13%), Postives = 51/87 (58.62%), Query Frame = 0
BLAST of IVF0003403 vs. NCBI nr
Match: KAG6595587.1 (hypothetical protein SDJN03_12140, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 66.6 bits (161), Expect = 6.08e-12 Identity = 40/87 (45.98%), Postives = 50/87 (57.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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