IVF0003381 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCATGCATGCAAGGGGGAGTTTGGAGATAAACTCCACCTTGGCGAGATAACTTCCATCATTTGTGTCCCGAAAGGAGAACAAGTTTGGGTATTAGGCATTGAGAGATTGTCACCCTTAAACAAGAAGCTCTATAAGTCTTGTAAGTGA ATGGCTCATGCATGCAAGGGGGAGTTTGGAGATAAACTCCACCTTGGCGAGATAACTTCCATCATTTGTGTCCCGAAAGGAGAACAAGTTTGGGTATTAGGCATTGAGAGATTGTCACCCTTAAACAAGAAGCTCTATAAGTCTTGTAAGTGA ATGGCTCATGCATGCAAGGGGGAGTTTGGAGATAAACTCCACCTTGGCGAGATAACTTCCATCATTTGTGTCCCGAAAGGAGAACAAGTTTGGGTATTAGGCATTGAGAGATTGTCACCCTTAAACAAGAAGCTCTATAAGTCTTGTAAGTGA MAHACKGEFGDKLHLGEITSIICVPKGEQVWVLGIERLSPLNKKLYKSCK Homology
BLAST of IVF0003381 vs. ExPASy TrEMBL
Match: A0A5D3C951 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1933G00010 PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 4.6e-10 Identity = 34/50 (68.00%), Postives = 37/50 (74.00%), Query Frame = 0
BLAST of IVF0003381 vs. ExPASy TrEMBL
Match: A0A5D3DDG5 (Cytochrome b561 and DOMON domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold305G00260 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 7.4e-08 Identity = 28/37 (75.68%), Postives = 33/37 (89.19%), Query Frame = 0
BLAST of IVF0003381 vs. ExPASy TrEMBL
Match: A0A5A7V332 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G001430 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 9.0e-06 Identity = 25/38 (65.79%), Postives = 30/38 (78.95%), Query Frame = 0
BLAST of IVF0003381 vs. ExPASy TrEMBL
Match: A0A5D3CY29 (Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G00960 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.5e-05 Identity = 25/42 (59.52%), Postives = 30/42 (71.43%), Query Frame = 0
BLAST of IVF0003381 vs. ExPASy TrEMBL
Match: A0A5D3BHD0 (LINE-1 reverse transcriptase isogeny OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold369G00010 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.0e-05 Identity = 24/37 (64.86%), Postives = 29/37 (78.38%), Query Frame = 0
BLAST of IVF0003381 vs. NCBI nr
Match: TYK07860.1 (uncharacterized protein E5676_scaffold1933G00010 [Cucumis melo var. makuwa]) HSP 1 Score: 71.6 bits (174), Expect = 1.76e-13 Identity = 34/50 (68.00%), Postives = 37/50 (74.00%), Query Frame = 0
BLAST of IVF0003381 vs. NCBI nr
Match: KAA0026294.1 (cytochrome b561 and DOMON domain-containing protein [Cucumis melo var. makuwa] >TYK21490.1 cytochrome b561 and DOMON domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 63.9 bits (154), Expect = 2.82e-10 Identity = 28/37 (75.68%), Postives = 33/37 (89.19%), Query Frame = 0
BLAST of IVF0003381 vs. NCBI nr
Match: KAA0032002.1 (Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa] >TYK16823.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 57.0 bits (136), Expect = 2.23e-08 Identity = 25/42 (59.52%), Postives = 30/42 (71.43%), Query Frame = 0
BLAST of IVF0003381 vs. NCBI nr
Match: KAA0062632.1 (uncharacterized protein E6C27_scaffold79G001430 [Cucumis melo var. makuwa]) HSP 1 Score: 57.4 bits (137), Expect = 2.33e-08 Identity = 25/38 (65.79%), Postives = 30/38 (78.95%), Query Frame = 0
BLAST of IVF0003381 vs. NCBI nr
Match: TYJ98051.1 (LINE-1 reverse transcriptase isogeny [Cucumis melo var. makuwa]) HSP 1 Score: 55.8 bits (133), Expect = 1.30e-07 Identity = 24/37 (64.86%), Postives = 29/37 (78.38%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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