IVF0003366 (gene) Melon (IVF77) v1

Overview
NameIVF0003366
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr09: 20947213 .. 20949459 (+)
RNA-Seq ExpressionIVF0003366
SyntenyIVF0003366
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTAATGATTGTGGAGAGAAGCATACAAATGATATATATATATATACAAATGATATATATTTATATTTCTTTGCCAGATATAGGTTTGAGATTGAACTCTCAAGAATCCTAATTATGAGAGATTTTATCTAAAATATAACCAATAGCAGGAAGTACGTAATATTTAATTACATACATAATGTATTGATAAACTTATTAGTACTTAACTAAAAGAAAGAAGAAGAAGAAAAAAAATCCGAACACTCTTGGCTGAAATAGTGCTTCCTGTTCTCACGCACATCCGACTGAGCTCTACGAACAAAATGCTACGGTGTAATTTGGTCGGTGCCTGCCTTTCGTCCTTATGGTTGGAAAGAAACAATCAAACATTCTAAGCGATATTGAGAAATCAAACCTACTGTAGTCATTTGTTGAGTACTATATCTGACCTTTGTAGATATTATGATGCAGACTCGTATATGGATACATTGGAAAGCTTTTCTTTAATCTCTTCTTCTTTTTTACTTTGGGATTCTTTTTTCTTGTACATATTTTTTACATTAACACAGTCATTTTTGGCTTTCGGATGTGATGTGTATGTTAAGAATATGTCAATTTAGTTGAAATTTTCGTGTGTGTCTCTTTGATCGTTCCACTTAATACTTTGTTTAAATAAATAAATAAAATCGTAAGTACATCCTTCCCTACAATTTTATTTTAAATAAATACAAGAATTAACCTAAATTAAATATAAATATTGTTTCATCTTTTTGTCTTCCTCTATTTAAGTCTTTAACATTAATAGCTATTATTTAGTTAAAAGTAATTATAAATGGAAATTTAATTTCAATTTTGATAATAATGTAAATTAAAATGAAATAGACATTAATTACGACAAAGGATGTGAAGTGAAAATTTGGTAAAAAGAAGAAGTTAAAAAGGTAAATCTTGAAAAGTTAGAACTTACGAACGAAAATGAAATATAAATAAAAAGAAAGCTAGAAAAGATAATTTAACTAGAGAGCTATACCAGAGCTTTTGTAAAGTGTTTTTGACTCAGATGATTAGAAATCAAAGGCTTTTTTTTATAGTGCCATGGAACGTATCATTTTTTGGCCTTTTCAACCAGAGGAAGTATGATTACTCTTAAAATATTTTGCCAAAACCTACCCATACATGTAGATATATGAATAACATTGGTCCAATAAAATATTTCACGTTTAGTCTTGGATGTGATCATAAAATTGTTGAAGGATGTCAACTTAGTTGAGATGTTCCGGTGTAACGACTATCGATCTTGTGAGTAGTTTTAAAAATAAACCATTCACTTTGAATTGGCTTTCATAATTAAAAGCTGATTTAATCACAACAGTTTTGTGGTGCATTTGACTCGAAAGAAATATATGACGTGCGCTTCAAGATATTGAAAAGCTCCAAAATAAACAATGGAGTGATATTGTGTCCTTGGTGATATTATGGAGTTCTAAATCTAATCTATATTGCACTTATGATGGTGTTACTACAGACCTAAACTGGATGATTTTTCTTTAAGTTTCTTGTATCACTTGGGTGAGTTGTTCTACAGCTCCTGATGTACATATTGAACTTTTTATCACGACGATTCGACGAATGCACTTTTCAGATTTGCAGTAGATTTATTAGACCCTATATTTTTGTTAAAAAAAAGTGACTTTGAGAAAAGCTAAAATATACTCAAAAACTATAAATTATAAATTCACCAATATGGCAGACTTTTATTGAAACATTTCAACTCCAAAAGGAAATAGCTCCAATGAAGAAAATTAAACAACTTAGAACCCTTTGCAATAAATTATAATACTTAGACAACTCTAGAACCACAAACATCAAAATACACTCAAAGAATTATCAAGAACAGAAAAAACTCTAAAATCAGCATTGGAATCCATTGGGAAGTTTCTTGTTGCAAACGTTAAGGAGCAAGCTGAGGTGGACTGGGATTTTAATCTTGTTCCCCAAAACACTAGCTTTGATGGCAGTGCAAAGGCAGGCGGCAGCTTCAAGATCGGCGAGACCTTTAACCAAGGTGCAGCATGGGGTCACTGGGGGCTTGCCGATGGTAATGTCGACGAGGCCACCGAGAAGCTTGGCACAGACACCGATTTTAAGGGCATCCTTAGGACACTTTCCGTACTTAGATGGATGGTTTGGTTTAGTAGGAGGGCATGGCTTGGGCTTGGGCTTGGGCTTGGTTGGGGCAGGGACATAGCAATTGTCACATGCTGA

mRNA sequence

ATGAGTAATGATTCATTGGAATCCATTGGGAAGTTTCTTGTTGCAAACGTTAAGGAGCAAGCTGAGGTGGACTGGGATTTTAATCTTGTTCCCCAAAACACTAGCTTTGATGGCAGTGCAAAGGCAGGCGGCAGCTTCAAGATCGGCGAGACCTTTAACCAAGGTGCAGCATGGGGTCACTGGGGGCTTGCCGATGGTAATGTCGACGAGGCCACCGAGAAGCTTGGCACAGACACCGATTTTAAGGGCATCCTTAGGACACTTTCCGTACTTAGATGGATGGTTTGGTTTAGTAGGAGGGCATGGCTTGGGCTTGGGCTTGGGCTTGGTTGGGGCAGGGACATAGCAATTGTCACATGCTGA

Coding sequence (CDS)

ATGAGTAATGATTCATTGGAATCCATTGGGAAGTTTCTTGTTGCAAACGTTAAGGAGCAAGCTGAGGTGGACTGGGATTTTAATCTTGTTCCCCAAAACACTAGCTTTGATGGCAGTGCAAAGGCAGGCGGCAGCTTCAAGATCGGCGAGACCTTTAACCAAGGTGCAGCATGGGGTCACTGGGGGCTTGCCGATGGTAATGTCGACGAGGCCACCGAGAAGCTTGGCACAGACACCGATTTTAAGGGCATCCTTAGGACACTTTCCGTACTTAGATGGATGGTTTGGTTTAGTAGGAGGGCATGGCTTGGGCTTGGGCTTGGGCTTGGTTGGGGCAGGGACATAGCAATTGTCACATGCTGA

Protein sequence

MSNDSLESIGKFLVANVKEQAEVDWDFNLVPQNTSFDGSAKAGGSFKIGETFNQGAAWGHWGLADGNVDEATEKLGTDTDFKGILRTLSVLRWMVWFSRRAWLGLGLGLGWGRDIAIVTC
Homology
[Close]
BLAST of IVF0003366 vs. ExPASy TrEMBL
Match: A0A0A0KP81 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G161320 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 3.9e-47
Identity = 92/117 (78.63%), Postives = 102/117 (87.18%), Query Frame = 0 

Query: 4   DSLESIGKFLVANVKEQAEVDWDFNLVPQNTSFDGSAKAGGSFKIGETFNQGAAWGHWGL 63
           ++LESIGK LVANVKEQA+V+WDFNLVPQN SF+GSAKA   FKI +T NQGAAWGHWGL
Sbjct: 10  NALESIGKILVANVKEQAKVEWDFNLVPQNASFNGSAKADSGFKISKTMNQGAAWGHWGL 69

Query: 64  ADGNVDEATEKLGTDTDFKGILRTLSVLRWMVWFSRRAWLGLGLGLGWGRDIAIVTC 121
           ADG VDEA +KLG DTDFKGILRTLS++RW VWFSRRAW    LGLGWGRDIAI+TC
Sbjct: 70  ADGEVDEAAKKLGADTDFKGILRTLSIVRWRVWFSRRAW----LGLGWGRDIAIITC 122

[Close]
BLAST of IVF0003366 vs. ExPASy TrEMBL
Match: A0A5K0YLX2 (Uncharacterized protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS8834 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.8e-04
Identity = 37/120 (30.83%), Postives = 60/120 (50.00%), Query Frame = 0 

Query: 1   MSNDSLESIGKFLVANVKEQAEVDWDFNLVPQNTSFDGSAKAGGSFKIGETFNQGAAWGH 60
           +S  +L S+G    A V E+ E+D + ++  Q+   DG A+AG   K+ +  ++GAA G 
Sbjct: 6   ISLSALVSVGDGAAAGVGEEGELDVEVDVDAQDVGLDGGAEAGSGLKVDQALDEGAAVGA 65

Query: 61  W-GLADGNVDEATEKLGTDTDFKGILRTLSVLRWMVWFSRRAWLGL--------GLGLGW 112
              +AD  V +A E++  D + +G+ R +    W+ W  R    GL        GL  GW
Sbjct: 66  TRRVADDQVKQAVEQVDADAELQGVDRAM----WVSWVVRLVHRGLVHGGLVHRGLVDGW 121

[Close]
BLAST of IVF0003366 vs. NCBI nr
Match: VVV78996.1 (unnamed protein product, partial [Nymphaea colorata])

HSP 1 Score: 53.1 bits (126), Expect = 9.60e-06
Identity = 33/106 (31.13%), Postives = 56/106 (52.83%), Query Frame = 0 

Query: 1   MSNDSLESIGKFLVANVKEQAEVDWDFNLVPQNTSFDGSAKAGGSFKIGETFNQGAAWGH 60
           +S  +L S+G    A V E+ E+D + ++  Q+   DG A+AG   K+ +  ++GAA G 
Sbjct: 6   ISLSALVSVGDGAAAGVGEEGELDVEVDVDAQDVGLDGGAEAGSGLKVDQALDEGAAVGA 65

Query: 61  WG-LADGNVDEATEKLGTDTDFKGILRTLSVLRWMVWFSRRAWLGL 105
              +AD  V +A E++  D + +G+ R +    W+ W  R    GL
Sbjct: 66  TRRVADDQVKQAVEQVDADAELQGVDRAM----WVSWVVRLVHRGL 107

[Close]
BLAST of IVF0003366 vs. NCBI nr
Match: RZS20053.1 (hypothetical protein BHM03_00052525 [Ensete ventricosum])

HSP 1 Score: 48.5 bits (114), Expect = 4.76e-04
Identity = 38/122 (31.15%), Postives = 56/122 (45.90%), Query Frame = 0 

Query: 3   NDSLESIGKFLVANVKEQAEVDWDFNLVPQNTSFDGSAKAGGSFKIGETFNQGAAWGHWG 62
           N+  E  G  L A V+EQAE D +     Q+ +  G AK  G  ++ E   Q AA     
Sbjct: 20  NEIQELYGHLLAAVVEEQAEADGEIKDEAQDVALQGGAKTDGGLEVSEALQQSAAGLLGR 79

Query: 63  LADGNVDEATEKLGTDTDFKGILRTLSVLRW------MVWFSRRAWLG-LGLGLGWGRDI 117
            A+  V++ATE +G D + + +   L           + W+  RA LG L + L W  D 
Sbjct: 80  RAERYVEQATENIGADAELERVPGALGPGAGARRRGRLPWWRIRAMLGWLVVALVWRFDA 139

[Close]
BLAST of IVF0003366 vs. NCBI nr
Match: RWW41645.1 (hypothetical protein BHE74_00052857 [Ensete ventricosum])

HSP 1 Score: 48.1 bits (113), Expect = 6.65e-04
Identity = 38/122 (31.15%), Postives = 56/122 (45.90%), Query Frame = 0 

Query: 3   NDSLESIGKFLVANVKEQAEVDWDFNLVPQNTSFDGSAKAGGSFKIGETFNQGAAWGHWG 62
           N+  E  G  L A V+EQAE D +     Q+ +  G AK  G  ++ E   Q AA     
Sbjct: 20  NEIQELYGHLLAAVVEEQAEADGEIKDEAQDVALQGGAKTHGGLEVSEALQQSAAGLLGR 79

Query: 63  LADGNVDEATEKLGTDTDFKGILRTLSVLRW------MVWFSRRAWLG-LGLGLGWGRDI 117
            A+  V++ATE +G D + + +   L           + W+  RA LG L + L W  D 
Sbjct: 80  RAERYVEQATENIGADAELERVPGALGPGAGARRRGRLPWWRIRAMLGWLVVALVWRFDA 139

[Close]
BLAST of IVF0003366 vs. NCBI nr
Match: KAF7112604.1 (hypothetical protein RHSIM_RhsimUnG0212400 [Rhododendron simsii])

HSP 1 Score: 49.3 bits (116), Expect = 7.00e-04
Identity = 24/64 (37.50%), Postives = 37/64 (57.81%), Query Frame = 0 

Query: 16  NVKEQAEVDWDFNLVPQNTSFDGSAKAGGSFKIGETFNQGAAWGHWGLADGNVDEATEKL 75
           N+K+Q+E + D  +  QN   DGSAKA    KI +  ++ AA   W     N+D+ T+++
Sbjct: 264 NIKKQSEGERDVEVDAQNVCLDGSAKANSCLKISKALDETAARSCWRSTHNNIDQPTKQI 323

Query: 76  GTDT 79
            TDT
Sbjct: 324 NTDT 327

[Close]
BLAST of IVF0003366 vs. NCBI nr
Match: KAG4948882.1 (hypothetical protein JHK86_042121 [Glycine max])

HSP 1 Score: 46.2 bits (108), Expect = 7.92e-04
Identity = 21/45 (46.67%), Postives = 30/45 (66.67%), Query Frame = 0 

Query: 17 VKEQAEVDWDFNLVPQNTSFDGSAKAGGSFKIGETFNQGAAWGHW 61
          V+  A+ +WD  +  +N SF+GSAKA  +FKI +T N+ AAW  W
Sbjct: 24 VENYAQGNWDVEVDAKNVSFEGSAKACSNFKIRKTLNEVAAWERW 68

The following BLAST results are available for this feature:
BLAST of IVF0003366 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0003366 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KP813.9e-4778.63Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G161320 PE=4 SV=1[more]
A0A5K0YLX21.8e-0430.83Uncharacterized protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS88... [more]
BLAST of IVF0003366 vs. NCBI nr
Match NameE-valueIdentityDescription
VVV78996.19.60e-0631.13unnamed protein product, partial [Nymphaea colorata][more]
RZS20053.14.76e-0431.15hypothetical protein BHM03_00052525 [Ensete ventricosum][more]
RWW41645.16.65e-0431.15hypothetical protein BHE74_00052857 [Ensete ventricosum][more]
KAF7112604.17.00e-0437.50hypothetical protein RHSIM_RhsimUnG0212400 [Rhododendron simsii][more]
KAG4948882.17.92e-0446.67hypothetical protein JHK86_042121 [Glycine max][more]
BLAST of IVF0003366 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0003366.1IVF0003366.1mRNA