IVF0003363 (gene) Melon (IVF77) v1

Overview


Name	IVF0003363
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Cytochrome C assembly protein
Location	chr09: 18344797 .. 18345544 (+)
RNA-Seq Expression	IVF0003363
Synteny	IVF0003363

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCTTTCCTTATTTCAACCTTCGTTTTTTATGTCAAAGACAAGAAGCTATGCGCAAATTATCATTGGATCTCGGTTGTTATTAACAGCGATGGCTATTCATTTAAGTCTTCGGGTAGCACCACTAGATCTTCAACAAGGTGGAAATTCTCGTATTCTGTATGTACATGTTTCTACGGCTTGGATGAGTATTCTTGTTTATATCGCTACGGCTATCAACACTTTCTTCTTACTATTAACAAAACATCTCCTTTTTCTTCGCTCTTTCGGAATCGATACAAAAATGGGTGCTTTTTTTTACCTTGTTGACTTTAGTGACTGGAGGGTTTCGGGGAAGACCTATGTAGGGCACCTTTTGGGTGTGGGATGCTCGTTTAACCTCTATATTCATCTCGTTCCTTATTTACCTGGGTGCACTACGTCTTCAAAAGCTTCCTGTCGAACCGGCTTCTATTTGAATCCATCTTGGACTGATCGACATACCAATAATCAAGTTTTTAGTTAACTGGTGGAATACATCACATCAACTTGGGAACATTAGCAGATCTGGTACATTAATACATGTTCCTATGCCCATTCCAATCTTATCTAACTTTGCTAACTTCCCCTTAGCAACTCGCATCTTCTTCGTTTTGGAAACACGTCTTCCTATTCCATTTTTTCCAGAATCTCCTTTCACGGAAGAAATCTCAGCTTTTTATGCTAAAATGACATCAGCAGGCTCAAAGAATCCCATGGAGCGGTAA

mRNA sequence

ATGTCTCTTTCCTTATTTCAACCTTCGTTTTTTATGTCAAAGACAAGAAGCTATGCGCAAATTATCATTGGATCTCGGTTGTTATTAACAGCGATGGCTATTCATTTAAGTCTTCGGGTAGCACCACTAGATCTTCAACAAGGTGGAAATTCTCGTATTCTGTATGTACATGTTTCTACGGCTTGGATGAGTATTCTTGTTTATATCGCTACGGCTATCAACACTTTCTTCTTACTATTAACAAAACATCTCCTTTTTCTTCGCTCTTTCGGAATCGATACAAAAATGGGTGCTTTTTTTTACCTTGGCACCTTTTGGGTGTGGGATGCTCGTTTAACCTCTATATTCATCTCGTTCCTTATTTACCTGGGTGCACTACGTCTTCAAAAGCTTCCTTTTTTAGTTAACTGGTGGAATACATCACATCAACTTGGGAACATTAGCAGATCTGGTACATTAATACATGTTCCTATGCCCATTCCAATCTTATCTAACTTTGCTAACTTCCCCTTAGCAACTCGCATCTTCTTCGTTTTGGAAACACGTCTTCCTATTCCATTTTTTCCAGAATCTCCTTTCACGGAAGAAATCTCAGCTTTTTATGCTAAAATGACATCAGCAGGCTCAAAGAATCCCATGGAGCGGTAA

Coding sequence (CDS)

ATGTCTCTTTCCTTATTTCAACCTTCGTTTTTTATGTCAAAGACAAGAAGCTATGCGCAAATTATCATTGGATCTCGGTTGTTATTAACAGCGATGGCTATTCATTTAAGTCTTCGGGTAGCACCACTAGATCTTCAACAAGGTGGAAATTCTCGTATTCTGTATGTACATGTTTCTACGGCTTGGATGAGTATTCTTGTTTATATCGCTACGGCTATCAACACTTTCTTCTTACTATTAACAAAACATCTCCTTTTTCTTCGCTCTTTCGGAATCGATACAAAAATGGGTGCTTTTTTTTACCTTGGCACCTTTTGGGTGTGGGATGCTCGTTTAACCTCTATATTCATCTCGTTCCTTATTTACCTGGGTGCACTACGTCTTCAAAAGCTTCCTTTTTTAGTTAACTGGTGGAATACATCACATCAACTTGGGAACATTAGCAGATCTGGTACATTAATACATGTTCCTATGCCCATTCCAATCTTATCTAACTTTGCTAACTTCCCCTTAGCAACTCGCATCTTCTTCGTTTTGGAAACACGTCTTCCTATTCCATTTTTTCCAGAATCTCCTTTCACGGAAGAAATCTCAGCTTTTTATGCTAAAATGACATCAGCAGGCTCAAAGAATCCCATGGAGCGGTAA

Protein sequence

MSLSLFQPSFFMSKTRSYAQIIIGSRLLLTAMAIHLSLRVAPLDLQQGGNSRILYVHVSTAWMSILVYIATAINTFFLLLTKHLLFLRSFGIDTKMGAFFYLGTFWVWDARLTSIFISFLIYLGALRLQKLPFLVNWWNTSHQLGNISRSGTLIHVPMPIPILSNFANFPLATRIFFVLETRLPIPFFPESPFTEEISAFYAKMTSAGSKNPMER

Homology

[Close]

BLAST of IVF0003363 vs. ExPASy Swiss-Prot
Match: P92527 (Putative cytochrome c biosynthesis ccmC-like mitochondrial protein OS=Arabidopsis thaliana OX=3702 GN=CCMC PE=2 SV=4)

HSP 1 Score: 255.4 bits (651), Expect = 5.8e-67
Identity = 151/232 (65.09%), Postives = 159/232 (68.53%), Query Frame = 0


Query: 1   MSLSLFQPSFFMSKTRSYAQIIIGSRLLLTAMAIHLSLRVAPLDLQQGGNSRILYVHVST 60
           MS+SL QPSF MSKTRSYAQI+IGS L LTAMAI+LSL VAPLD QQGGNSRILYVHV  
Sbjct: 1   MSVSLLQPSFLMSKTRSYAQILIGSWLFLTAMAIYLSLGVAPLDFQQGGNSRILYVHVPV 60

Query: 61  AWMSILVYIATAINTFFLLLTKHLLFLRSFGIDTKMGAFFYL--------------GTFW 120
           AWMSI+VYIATAINTF  LLTKH L+L S G   +MGAFF L              GTFW
Sbjct: 61  AWMSIIVYIATAINTFLFLLTKHPLYLCSSGTGIEMGAFFTLFTLVTGGFWGRPMWGTFW 120

Query: 121 VWDARLTSIFISFLIYLGALRLQKLP-------------------FLVNWWNTSHQLGNI 180
           VWDARLTS+FI F IYLGAL  QKLP                   F VNWWNT HQ G+I
Sbjct: 121 VWDARLTSVFILFFIYLGALCFQKLPVELASILICVGLIDIPIIKFSVNWWNTLHQPGSI 180

Query: 181 SRSGTLIHVPMPIPILSNFANFPLATRIFFVLETRLPIPFFPESPFTEEISA 200
           SR GT IHV M IPILSNFANF   T I FVLETRL I  F ES  TEEI A
Sbjct: 181 SRFGTSIHVSMLIPILSNFANFLFLTCILFVLETRLLILSFLESSITEEIEA 232

[Close]

BLAST of IVF0003363 vs. ExPASy Swiss-Prot
Match: P38453 (Putative cytochrome c biosynthesis ccmC-like mitochondrial protein OS=Marchantia polymorpha OX=3197 GN=CCMC PE=3 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.2e-43
Identity = 108/215 (50.23%), Postives = 128/215 (59.53%), Query Frame = 0


Query: 1   MSLSLFQPSFFMSKTRSYAQIIIGSRLLLTAMAIHLSLRVAPLDLQQGGNSRILYVHVST 60
           M + L +P FFM  +  YAQI+IG    LTAMAI+LS+ VAP D QQG N RI+YVHV  
Sbjct: 1   MYVPLLRPFFFMCCSFRYAQILIGFCWFLTAMAIYLSIWVAPSDFQQGENYRIIYVHVPA 60

Query: 61  AWMSILVYIATAINTFFLLLTKHLLFLRSFGIDTKMGAFFYL--------------GTFW 120
           AWMS+L+YIA AI++   LLTKH LF        K+GA F L              GTFW
Sbjct: 61  AWMSLLIYIAMAISSVLFLLTKHPLFQLFSKTAAKIGALFTLFTLVTGGFWGKPMWGTFW 120

Query: 121 VWDARLTSIFISFLIYLGALRLQK-------------------LPFLVNWWNTSHQLGNI 180
           VWDARLTS+ I F IYLGALR Q+                   + F VNWWNT HQ  +I
Sbjct: 121 VWDARLTSVLILFFIYLGALRFQEFSADVASIFICIGLINIPIIKFSVNWWNTLHQPSSI 180

Query: 181 SRSGTLIHVPMPIPILSNFANFPLATRIFFVLETR 183
           S+ GT IH+ M IPI   FA+F   T IFF+LETR
Sbjct: 181 SQFGTSIHISMLIPIFLIFASFFFLTGIFFILETR 215

[Close]

BLAST of IVF0003363 vs. ExPASy Swiss-Prot
Match: P30962 (Heme exporter protein C OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110) OX=224911 GN=cycZ PE=3 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.2e-13
Identity = 55/188 (29.26%), Postives = 88/188 (46.81%), Query Frame = 0


Query: 3   LSLFQPSFFMSKTRSYAQIIIGSRLLLTAMAIHLSLRVAPLDLQQGGNSRILYVHVSTAW 62
           + L  P+ F++ T      +  + ++L A+ ++ S  +AP D QQG   +I+++HV  AW
Sbjct: 4   IDLANPTRFLALTARVLPWLAAATVILLAIGLYQS-ALAPDDYQQGATVKIMFIHVPNAW 63

Query: 63  MSILVYIATAINTFFLLLTKHLLFLRSFGIDTKMGAFFYL--------------GTFWVW 122
           +S+ V+   +I +   L+ +H L   +      +GA F                GT+W W
Sbjct: 64  LSMFVWGVMSIASLGTLVWRHPLADVAAKAAAPIGAAFTFLALLTGSLWGRPMWGTYWEW 123

Query: 123 DARLTSIFISFLIYL-------------------------GALRLQKLPFLVNWWNTSHQ 152
           DARLTS+ I FL+YL                         GA+ L  + F V+WWNT HQ
Sbjct: 124 DARLTSVLILFLMYLGLMALWRAVDDPSRAARAAAVLTLVGAINLPIIKFSVDWWNTLHQ 183

[Close]

BLAST of IVF0003363 vs. ExPASy Swiss-Prot
Match: P45034 (Heme exporter protein C OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=ccmC PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.3e-10
Identity = 57/181 (31.49%), Postives = 78/181 (43.09%), Query Frame = 0


Query: 27  LLLTAMAIHLSLRVAPLDLQQGGNSRILYVHVSTAWMSILVY----IATAINTFFLLLTK 86
           L+L  + I   L  AP D QQG + RI+YVH  TA  S+ VY    IA  +   + +   
Sbjct: 30  LVLLGVGIVWGLAFAPADYQQGNSFRIMYVHAPTAIWSMGVYGSMAIAAVVALVWQIKQA 89

Query: 87  HLLFLRSFGIDTKMGAFFYL--------------GTFWVWDARLTSIFISFLIYLGALRL 146
           HL  +        +GA F                GT+WVWDARLT+  I F +YLG L L
Sbjct: 90  HLAMIAM----APIGALFTFLSLVTGAIWGKPMWGTWWVWDARLTAELILFFLYLGILAL 149

Query: 147 QK-------------------------LPFLVNWWNTSHQLGNISR-SGTLIHVPMPIPI 164
                                      + F V WWNT HQ  +I++     I +PM +P+
Sbjct: 150 YSAFSDRNIGAKAAGILCITTVVILPIIHFSVEWWNTLHQGASITKLEKPSIAIPMLVPL 206

[Close]

BLAST of IVF0003363 vs. ExPASy Swiss-Prot
Match: P0ABM3 (Heme exporter protein C OS=Escherichia coli O157:H7 OX=83334 GN=ccmC PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.4e-07
Identity = 43/142 (30.28%), Postives = 61/142 (42.96%), Query Frame = 0


Query: 41  APLDLQQGGNSRILYVHVSTAWMSILVYIATAINTFFLLLTKHLLFLRSFGIDTKMGAFF 100
           AP D QQG + RI+Y+HV  A  S+ +Y + A+  F  L+ +  +   +      +GA F
Sbjct: 44  APADYQQGNSYRIIYLHVPAAIWSMGIYASMAVAAFIGLVWQMKMANLAVAAMAPIGAVF 103

Query: 101 YL--------------GTFWVWDARLTSIFISFLIYLGALRL------------------ 144
                           GT+WVWDARLTS  +   +Y+G + L                  
Sbjct: 104 TFIALVTGSAWGKPMWGTWWVWDARLTSELVLLFLYVGVIALWHAFDDRRLAGRAAGILV 163

[Close]

BLAST of IVF0003363 vs. ExPASy TrEMBL
Match: A0A5A7UR69 (Cytochrome c biogenesis C (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46347G00010 PE=3 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 6.4e-93
Identity = 193/248 (77.82%), Postives = 197/248 (79.44%), Query Frame = 0


Query: 1   MSLSLFQPSFFMSKTRSYAQIIIGSRLLLTAMAIHLSLRVAPLDLQQGGNSRILYVHVST 60
           MSLSL QPSF MSKTRSYAQI+IGSRL LTAMAIHLSLRVAPLDLQQGGNSRILYVHV  
Sbjct: 1   MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAMAIHLSLRVAPLDLQQGGNSRILYVHVPA 60

Query: 61  AWMSILVYIATAINTFFLLLTKHLLFLRSFGIDTKMGAFFYL--------------GTFW 120
           A MSILVYIATAINTFF LLTKH LFLRS G  T+MGAFF L              GTFW
Sbjct: 61  ARMSILVYIATAINTFFFLLTKHPLFLRSSGTGTEMGAFFTLFTLVTGGFRGRPMWGTFW 120

Query: 121 VWDARLTSIFISFLIYLGALRLQKLP-------------------FLVNWWNTSHQLGNI 180
           VWDARLTS+FISFLIYLGALR QKLP                   F VNWWNTSHQ G+I
Sbjct: 121 VWDARLTSVFISFLIYLGALRFQKLPVEPASISIRLGPIDIPIIKFSVNWWNTSHQPGSI 180

Query: 181 SRSGTLIHVPMPIPILSNFANFPLATRIFFVLETRLPIPFFPESPFTEEISAFYAKMTSA 216
           S SGT IHVPMPIPILSNFANFPLATRIFFVLETRLPIPFFPESPFTEEISAFYAKMTSA
Sbjct: 181 SGSGTSIHVPMPIPILSNFANFPLATRIFFVLETRLPIPFFPESPFTEEISAFYAKMTSA 240

[Close]

BLAST of IVF0003363 vs. ExPASy TrEMBL
Match: G3EU20 (Putative cytochrome c biosynthesis ccmC-like mitochondrial protein OS=Cucumis melo subsp. melo OX=412675 GN=ccmC PE=3 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 6.4e-93
Identity = 193/248 (77.82%), Postives = 197/248 (79.44%), Query Frame = 0


Query: 1   MSLSLFQPSFFMSKTRSYAQIIIGSRLLLTAMAIHLSLRVAPLDLQQGGNSRILYVHVST 60
           MSLSL QPSF MSKTRSYAQI+IGSRL LTAMAIHLSLRVAPLDLQQGGNSRILYVHV  
Sbjct: 1   MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAMAIHLSLRVAPLDLQQGGNSRILYVHVPA 60

Query: 61  AWMSILVYIATAINTFFLLLTKHLLFLRSFGIDTKMGAFFYL--------------GTFW 120
           A MSILVYIATAINTFF LLTKH LFLRS G  T+MGAFF L              GTFW
Sbjct: 61  ARMSILVYIATAINTFFFLLTKHPLFLRSSGTGTEMGAFFTLFTLVTGGFRGRPMWGTFW 120

Query: 121 VWDARLTSIFISFLIYLGALRLQKLP-------------------FLVNWWNTSHQLGNI 180
           VWDARLTS+FISFLIYLGALR QKLP                   F VNWWNTSHQ G+I
Sbjct: 121 VWDARLTSVFISFLIYLGALRFQKLPVEPASISIRLGPIDIPIIKFSVNWWNTSHQPGSI 180

Query: 181 SRSGTLIHVPMPIPILSNFANFPLATRIFFVLETRLPIPFFPESPFTEEISAFYAKMTSA 216
           S SGT IHVPMPIPILSNFANFPLATRIFFVLETRLPIPFFPESPFTEEISAFYAKMTSA
Sbjct: 181 SGSGTSIHVPMPIPILSNFANFPLATRIFFVLETRLPIPFFPESPFTEEISAFYAKMTSA 240

[Close]

BLAST of IVF0003363 vs. ExPASy TrEMBL
Match: A0A3S5HPI6 (Putative cytochrome c biosynthesis ccmC-like mitochondrial protein OS=Cucumis melo var. momordica OX=2034244 GN=ccmC PE=3 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 6.4e-93
Identity = 193/248 (77.82%), Postives = 197/248 (79.44%), Query Frame = 0


Query: 1   MSLSLFQPSFFMSKTRSYAQIIIGSRLLLTAMAIHLSLRVAPLDLQQGGNSRILYVHVST 60
           MSLSL QPSF MSKTRSYAQI+IGSRL LTAMAIHLSLRVAPLDLQQGGNSRILYVHV  
Sbjct: 1   MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAMAIHLSLRVAPLDLQQGGNSRILYVHVPA 60

Query: 61  AWMSILVYIATAINTFFLLLTKHLLFLRSFGIDTKMGAFFYL--------------GTFW 120
           A MSILVYIATAINTFF LLTKH LFLRS G  T+MGAFF L              GTFW
Sbjct: 61  ARMSILVYIATAINTFFFLLTKHPLFLRSSGTGTEMGAFFTLFTLVTGGFRGRPMWGTFW 120

Query: 121 VWDARLTSIFISFLIYLGALRLQKLP-------------------FLVNWWNTSHQLGNI 180
           VWDARLTS+FISFLIYLGALR QKLP                   F VNWWNTSHQ G+I
Sbjct: 121 VWDARLTSVFISFLIYLGALRFQKLPVEPASISIRLGPIDIPIIKFSVNWWNTSHQPGSI 180

Query: 181 SRSGTLIHVPMPIPILSNFANFPLATRIFFVLETRLPIPFFPESPFTEEISAFYAKMTSA 216
           S SGT IHVPMPIPILSNFANFPLATRIFFVLETRLPIPFFPESPFTEEISAFYAKMTSA
Sbjct: 181 SGSGTSIHVPMPIPILSNFANFPLATRIFFVLETRLPIPFFPESPFTEEISAFYAKMTSA 240

[Close]

BLAST of IVF0003363 vs. ExPASy TrEMBL
Match: G3EIZ2 (Putative cytochrome c biosynthesis ccmC-like mitochondrial protein OS=Cucumis sativus OX=3659 GN=ccmC PE=3 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 6.9e-87
Identity = 185/246 (75.20%), Postives = 189/246 (76.83%), Query Frame = 0


Query: 1   MSLSLFQPSFFMSKTRSYAQIIIGSRLLLTAMAIHLSLRVAPLDLQQGGNSRILYVHVST 60
           MSLSL QPSF MSKTRSYAQI+IGSRL LTAMAIHLSLRVAPLDLQQGGNSRILYVHV  
Sbjct: 1   MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAMAIHLSLRVAPLDLQQGGNSRILYVHVPA 60

Query: 61  AWMSILVYIATAINTFFLLLTKHLLFLRSFGIDTKMGAFFYL--------------GTFW 120
           A MSILVYIATAINTF  LLTKH LFLRS G  T+MGAFF L              GTFW
Sbjct: 61  ARMSILVYIATAINTFLFLLTKHPLFLRSSGTGTEMGAFFTLFTLVTGGFRGRPMWGTFW 120

Query: 121 VWDARLTSIFISFLIYLGALRLQKLP-------------------FLVNWWNTSHQLGNI 180
           VWDARLTS+FISFLIYLGALR QKLP                   F VNWWNTSHQ G+I
Sbjct: 121 VWDARLTSVFISFLIYLGALRFQKLPVEPASISIRLGPIDIPIIKFSVNWWNTSHQPGSI 180

Query: 181 SRSGTLIHVPMPIPILSNFANFPLATRIFFVLETRLPIPFFPESPFTEEISAFYAKMTSA 214
           S SGT IHVPMPIPILSNFANFPLATRIFFVLETRLPIPFFPESP TEEISAFYAKMT  
Sbjct: 181 SGSGTSIHVPMPIPILSNFANFPLATRIFFVLETRLPIPFFPESPLTEEISAFYAKMTVR 240

[Close]

BLAST of IVF0003363 vs. ExPASy TrEMBL
Match: A0A451F281 (Putative cytochrome c biosynthesis ccmC-like mitochondrial protein OS=Acacia ligulata OX=138025 GN=ccmC PE=3 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 8.2e-80
Identity = 170/232 (73.28%), Postives = 177/232 (76.29%), Query Frame = 0


Query: 1   MSLSLFQPSFFMSKTRSYAQIIIGSRLLLTAMAIHLSLRVAPLDLQQGGNSRILYVHVST 60
           MSLSL QPSFFMSKTRSYAQI+IGSRL LTAMAIHLSLRVAPLDLQQGGNSRILYVHV  
Sbjct: 1   MSLSLLQPSFFMSKTRSYAQILIGSRLFLTAMAIHLSLRVAPLDLQQGGNSRILYVHVPA 60

Query: 61  AWMSILVYIATAINTFFLLLTKHLLFLRSFGIDTKMGAFFYL--------------GTFW 120
           A MSILVY+ATAINTF  LLTKH LFLRS G  T+MGAFF L              GTFW
Sbjct: 61  ARMSILVYLATAINTFLFLLTKHPLFLRSSGTGTEMGAFFTLFTLVTGGFRGRPMWGTFW 120

Query: 121 VWDARLTSIFISFLIYLGALRLQKLPF-------------------LVNWWNTSHQLGNI 180
           VWDARLTS+FISFLIYLGALR QKLP                     VNWWNTSHQ G+I
Sbjct: 121 VWDARLTSVFISFLIYLGALRFQKLPVEPAPISIRAGPIDIPIIKSSVNWWNTSHQPGSI 180

Query: 181 SRSGTLIHVPMPIPILSNFANFPLATRIFFVLETRLPIPFFPESPFTEEISA 200
           SRSGT IHVPMPIPILSNFANFP +TRIFFVLETRLPIP FPESP  +EI A
Sbjct: 181 SRSGTSIHVPMPIPILSNFANFPFSTRIFFVLETRLPIPSFPESPLRDEIEA 232

[Close]

BLAST of IVF0003363 vs. NCBI nr
Match: AEN56104.1 (cytochrome c biogenesis C [Cucumis melo subsp. melo] >AZP40290.1 cytochrome c biogenesis C [Cucumis melo var. momordica])

HSP 1 Score: 347 bits (889), Expect = 1.97e-118
Identity = 193/248 (77.82%), Postives = 197/248 (79.44%), Query Frame = 0


Query: 1   MSLSLFQPSFFMSKTRSYAQIIIGSRLLLTAMAIHLSLRVAPLDLQQGGNSRILYVHVST 60
           MSLSL QPSF MSKTRSYAQI+IGSRL LTAMAIHLSLRVAPLDLQQGGNSRILYVHV  
Sbjct: 1   MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAMAIHLSLRVAPLDLQQGGNSRILYVHVPA 60

Query: 61  AWMSILVYIATAINTFFLLLTKHLLFLRSFGIDTKMGAFFYL--------------GTFW 120
           A MSILVYIATAINTFF LLTKH LFLRS G  T+MGAFF L              GTFW
Sbjct: 61  ARMSILVYIATAINTFFFLLTKHPLFLRSSGTGTEMGAFFTLFTLVTGGFRGRPMWGTFW 120

Query: 121 VWDARLTSIFISFLIYLGALRLQKLP-------------------FLVNWWNTSHQLGNI 180
           VWDARLTS+FISFLIYLGALR QKLP                   F VNWWNTSHQ G+I
Sbjct: 121 VWDARLTSVFISFLIYLGALRFQKLPVEPASISIRLGPIDIPIIKFSVNWWNTSHQPGSI 180

Query: 181 SRSGTLIHVPMPIPILSNFANFPLATRIFFVLETRLPIPFFPESPFTEEISAFYAKMTSA 215
           S SGT IHVPMPIPILSNFANFPLATRIFFVLETRLPIPFFPESPFTEEISAFYAKMTSA
Sbjct: 181 SGSGTSIHVPMPIPILSNFANFPLATRIFFVLETRLPIPFFPESPFTEEISAFYAKMTSA 240

[Close]

BLAST of IVF0003363 vs. NCBI nr
Match: KAA0056125.1 (cytochrome c biogenesis C [Cucumis melo var. makuwa])

HSP 1 Score: 347 bits (889), Expect = 2.20e-116
Identity = 193/248 (77.82%), Postives = 197/248 (79.44%), Query Frame = 0


Query: 1   MSLSLFQPSFFMSKTRSYAQIIIGSRLLLTAMAIHLSLRVAPLDLQQGGNSRILYVHVST 60
           MSLSL QPSF MSKTRSYAQI+IGSRL LTAMAIHLSLRVAPLDLQQGGNSRILYVHV  
Sbjct: 1   MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAMAIHLSLRVAPLDLQQGGNSRILYVHVPA 60

Query: 61  AWMSILVYIATAINTFFLLLTKHLLFLRSFGIDTKMGAFFYL--------------GTFW 120
           A MSILVYIATAINTFF LLTKH LFLRS G  T+MGAFF L              GTFW
Sbjct: 61  ARMSILVYIATAINTFFFLLTKHPLFLRSSGTGTEMGAFFTLFTLVTGGFRGRPMWGTFW 120

Query: 121 VWDARLTSIFISFLIYLGALRLQKLP-------------------FLVNWWNTSHQLGNI 180
           VWDARLTS+FISFLIYLGALR QKLP                   F VNWWNTSHQ G+I
Sbjct: 121 VWDARLTSVFISFLIYLGALRFQKLPVEPASISIRLGPIDIPIIKFSVNWWNTSHQPGSI 180

Query: 181 SRSGTLIHVPMPIPILSNFANFPLATRIFFVLETRLPIPFFPESPFTEEISAFYAKMTSA 215
           S SGT IHVPMPIPILSNFANFPLATRIFFVLETRLPIPFFPESPFTEEISAFYAKMTSA
Sbjct: 181 SGSGTSIHVPMPIPILSNFANFPLATRIFFVLETRLPIPFFPESPFTEEISAFYAKMTSA 240

[Close]

BLAST of IVF0003363 vs. NCBI nr
Match: YP_004849340.1 (cytochrome c biogenesis C [Cucumis sativus] >ADZ10767.1 cytochrome c biogenesis C [Cucumis sativus])

HSP 1 Score: 327 bits (837), Expect = 1.57e-110
Identity = 185/246 (75.20%), Postives = 189/246 (76.83%), Query Frame = 0


Query: 1   MSLSLFQPSFFMSKTRSYAQIIIGSRLLLTAMAIHLSLRVAPLDLQQGGNSRILYVHVST 60
           MSLSL QPSF MSKTRSYAQI+IGSRL LTAMAIHLSLRVAPLDLQQGGNSRILYVHV  
Sbjct: 1   MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAMAIHLSLRVAPLDLQQGGNSRILYVHVPA 60

Query: 61  AWMSILVYIATAINTFFLLLTKHLLFLRSFGIDTKMGAFFYL--------------GTFW 120
           A MSILVYIATAINTF  LLTKH LFLRS G  T+MGAFF L              GTFW
Sbjct: 61  ARMSILVYIATAINTFLFLLTKHPLFLRSSGTGTEMGAFFTLFTLVTGGFRGRPMWGTFW 120

Query: 121 VWDARLTSIFISFLIYLGALRLQKLP-------------------FLVNWWNTSHQLGNI 180
           VWDARLTS+FISFLIYLGALR QKLP                   F VNWWNTSHQ G+I
Sbjct: 121 VWDARLTSVFISFLIYLGALRFQKLPVEPASISIRLGPIDIPIIKFSVNWWNTSHQPGSI 180

Query: 181 SRSGTLIHVPMPIPILSNFANFPLATRIFFVLETRLPIPFFPESPFTEEISAFYAKMTSA 213
           S SGT IHVPMPIPILSNFANFPLATRIFFVLETRLPIPFFPESP TEEISAFYAKMT  
Sbjct: 181 SGSGTSIHVPMPIPILSNFANFPLATRIFFVLETRLPIPFFPESPLTEEISAFYAKMTVR 240

[Close]

BLAST of IVF0003363 vs. NCBI nr
Match: YP_009560009.1 (cytochrome c biogenesis C [Acacia ligulata] >AZZ06834.1 cytochrome c biogenesis C [Acacia ligulata])

HSP 1 Score: 303 bits (776), Expect = 2.99e-101
Identity = 170/232 (73.28%), Postives = 177/232 (76.29%), Query Frame = 0


Query: 1   MSLSLFQPSFFMSKTRSYAQIIIGSRLLLTAMAIHLSLRVAPLDLQQGGNSRILYVHVST 60
           MSLSL QPSFFMSKTRSYAQI+IGSRL LTAMAIHLSLRVAPLDLQQGGNSRILYVHV  
Sbjct: 1   MSLSLLQPSFFMSKTRSYAQILIGSRLFLTAMAIHLSLRVAPLDLQQGGNSRILYVHVPA 60

Query: 61  AWMSILVYIATAINTFFLLLTKHLLFLRSFGIDTKMGAFFYL--------------GTFW 120
           A MSILVY+ATAINTF  LLTKH LFLRS G  T+MGAFF L              GTFW
Sbjct: 61  ARMSILVYLATAINTFLFLLTKHPLFLRSSGTGTEMGAFFTLFTLVTGGFRGRPMWGTFW 120

Query: 121 VWDARLTSIFISFLIYLGALRLQKLPF-------------------LVNWWNTSHQLGNI 180
           VWDARLTS+FISFLIYLGALR QKLP                     VNWWNTSHQ G+I
Sbjct: 121 VWDARLTSVFISFLIYLGALRFQKLPVEPAPISIRAGPIDIPIIKSSVNWWNTSHQPGSI 180

Query: 181 SRSGTLIHVPMPIPILSNFANFPLATRIFFVLETRLPIPFFPESPFTEEISA 199
           SRSGT IHVPMPIPILSNFANFP +TRIFFVLETRLPIP FPESP  +EI A
Sbjct: 181 SRSGTSIHVPMPIPILSNFANFPFSTRIFFVLETRLPIPSFPESPLRDEIEA 232

[Close]

BLAST of IVF0003363 vs. NCBI nr
Match: YP_009913608.1 (cytochrome c biogenesis C [Luffa acutangula] >QLJ93005.1 cytochrome c biogenesis C [Luffa acutangula])

HSP 1 Score: 302 bits (774), Expect = 3.61e-101
Identity = 171/232 (73.71%), Postives = 176/232 (75.86%), Query Frame = 0


Query: 1   MSLSLFQPSFFMSKTRSYAQIIIGSRLLLTAMAIHLSLRVAPLDLQQGGNSRILYVHVST 60
           MSLSL QPSF MSKTRSYAQI+IGSRL LTAMAIHLSLRVAPLDLQQGGNSRILYVHV  
Sbjct: 1   MSLSLLQPSFLMSKTRSYAQILIGSRLFLTAMAIHLSLRVAPLDLQQGGNSRILYVHVPA 60

Query: 61  AWMSILVYIATAINTFFLLLTKHLLFLRSFGIDTKMGAFFYL--------------GTFW 120
           A MSILVYIATAINTF  LLTKH LFLRS G  T+MGAFF L              GTFW
Sbjct: 61  ARMSILVYIATAINTFLFLLTKHPLFLRSSGTGTEMGAFFTLFTLVTGGFRGRPMWGTFW 120

Query: 121 VWDARLTSIFISFLIYLGALRLQKLP-------------------FLVNWWNTSHQLGNI 180
           VWDARLTS+FISFLIYLGAL  QKLP                   F VNWWNTSHQ G+I
Sbjct: 121 VWDARLTSVFISFLIYLGALCFQKLPVEPASISIRVGPIDIPIIKFSVNWWNTSHQPGSI 180

Query: 181 SRSGTLIHVPMPIPILSNFANFPLATRIFFVLETRLPIPFFPESPFTEEISA 199
           SRSGT IHVPMPIPILSNFANFP +TRI FVLETRLPIP FPESP TEEI A
Sbjct: 181 SRSGTSIHVPMPIPILSNFANFPFSTRILFVLETRLPIPSFPESPLTEEIEA 232

[Close]

BLAST of IVF0003363 vs. TAIR 10
Match: AT2G07771.2 (Cytochrome C assembly protein )

HSP 1 Score: 291.2 bits (744), Expect = 6.8e-79
Identity = 164/232 (70.69%), Postives = 172/232 (74.14%), Query Frame = 0


Query: 1   MSLSLFQPSFFMSKTRSYAQIIIGSRLLLTAMAIHLSLRVAPLDLQQGGNSRILYVHVST 60
           MS+SL QPSF MSKTRSYAQI+IGS L LTAMAIHLSL VAPLDLQQGGNSRILYVHV  
Sbjct: 1   MSVSLLQPSFLMSKTRSYAQILIGSWLFLTAMAIHLSLGVAPLDLQQGGNSRILYVHVPA 60

Query: 61  AWMSILVYIATAINTFFLLLTKHLLFLRSFGIDTKMGAFFYL--------------GTFW 120
           A MSI+VYIATAINTF  LLTKH L+LRS G   +MGAFF L              GTFW
Sbjct: 61  ARMSIIVYIATAINTFLFLLTKHPLYLRSSGTGIEMGAFFTLFTLVTGGFRGRPMWGTFW 120

Query: 121 VWDARLTSIFISFLIYLGALRLQKLPF-------------------LVNWWNTSHQLGNI 180
           VWDARLTS+FISFLIYLGALR QKLP                     VNWWNTSHQ G+I
Sbjct: 121 VWDARLTSVFISFLIYLGALRFQKLPVEPASISIRAGPIDIPIIKSSVNWWNTSHQPGSI 180

Query: 181 SRSGTLIHVPMPIPILSNFANFPLATRIFFVLETRLPIPFFPESPFTEEISA 200
           SRSGT IHVPMPIPILSNFANFP +TRI FVLETRLPIP F ESP TEEI A
Sbjct: 181 SRSGTSIHVPMPIPILSNFANFPFSTRILFVLETRLPIPSFLESPITEEIEA 232

[Close]

BLAST of IVF0003363 vs. TAIR 10
Match: ATMG00900.1 (cytochrome C biogenesis 256 )

HSP 1 Score: 291.2 bits (744), Expect = 6.8e-79
Identity = 164/232 (70.69%), Postives = 172/232 (74.14%), Query Frame = 0


Query: 1   MSLSLFQPSFFMSKTRSYAQIIIGSRLLLTAMAIHLSLRVAPLDLQQGGNSRILYVHVST 60
           MS+SL QPSF MSKTRSYAQI+IGS L LTAMAIHLSL VAPLDLQQGGNSRILYVHV  
Sbjct: 1   MSVSLLQPSFLMSKTRSYAQILIGSWLFLTAMAIHLSLGVAPLDLQQGGNSRILYVHVPA 60

Query: 61  AWMSILVYIATAINTFFLLLTKHLLFLRSFGIDTKMGAFFYL--------------GTFW 120
           A MSI+VYIATAINTF  LLTKH L+LRS G   +MGAFF L              GTFW
Sbjct: 61  ARMSIIVYIATAINTFLFLLTKHPLYLRSSGTGIEMGAFFTLFTLVTGGFRGRPMWGTFW 120

Query: 121 VWDARLTSIFISFLIYLGALRLQKLPF-------------------LVNWWNTSHQLGNI 180
           VWDARLTS+FISFLIYLGALR QKLP                     VNWWNTSHQ G+I
Sbjct: 121 VWDARLTSVFISFLIYLGALRFQKLPVEPASISIRAGPIDIPIIKSSVNWWNTSHQPGSI 180

Query: 181 SRSGTLIHVPMPIPILSNFANFPLATRIFFVLETRLPIPFFPESPFTEEISA 200
           SRSGT IHVPMPIPILSNFANFP +TRI FVLETRLPIP F ESP TEEI A
Sbjct: 181 SRSGTSIHVPMPIPILSNFANFPFSTRILFVLETRLPIPSFLESPITEEIEA 232

[Close]

BLAST of IVF0003363 vs. TAIR 10
Match: AT2G07681.1 (Cytochrome C assembly protein )

HSP 1 Score: 244.2 bits (622), Expect = 9.6e-65
Identity = 138/200 (69.00%), Postives = 145/200 (72.50%), Query Frame = 0


Query: 15  TRSYAQIIIGSRLLLTAMAIHLSLRVAPLDLQQGGNSRILYVHVSTAWMSILVYIATAIN 74
           TRSYAQI+IGS L LTAMAIHLSL VAPLDLQQGGNSRILYVHV  A MSI+VYIATAIN
Sbjct: 395 TRSYAQILIGSWLFLTAMAIHLSLGVAPLDLQQGGNSRILYVHVPAARMSIIVYIATAIN 454

Query: 75  TFFLLLTKHLLFLRSFGIDTKMGAFFYL--------------GTFWVWDARLTSIFISFL 134
           TF  LLTKH L+LRS G   +MGAFF L              GTFWVWDARLTS+FISFL
Sbjct: 455 TFLFLLTKHPLYLRSSGTGIEMGAFFTLFTLVTGGFRGRPMWGTFWVWDARLTSVFISFL 514

Query: 135 IYLGALRLQKLPF-------------------LVNWWNTSHQLGNISRSGTLIHVPMPIP 182
           IYLGALR QKLP                     VNWWNTSHQ G+ISRS T IHVPMPIP
Sbjct: 515 IYLGALRFQKLPVEPASISIRAGPIDIPIIKSSVNWWNTSHQPGSISRSSTSIHVPMPIP 574

The following BLAST results are available for this feature:

BLAST of IVF0003363 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92527	5.8e-67	65.09	Putative cytochrome c biosynthesis ccmC-like mitochondrial protein OS=Arabidopsi...	[more]
P38453	1.2e-43	50.23	Putative cytochrome c biosynthesis ccmC-like mitochondrial protein OS=Marchantia...	[more]
P30962	2.2e-13	29.26	Heme exporter protein C OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / BCR...	[more]
P45034	1.3e-10	31.49	Heme exporter protein C OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121...	[more]
P0ABM3	1.4e-07	30.28	Heme exporter protein C OS=Escherichia coli O157:H7 OX=83334 GN=ccmC PE=3 SV=1	[more]

BLAST of IVF0003363 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UR69	6.4e-93	77.82	Cytochrome c biogenesis C (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194695...	[more]
G3EU20	6.4e-93	77.82	Putative cytochrome c biosynthesis ccmC-like mitochondrial protein OS=Cucumis me...	[more]
A0A3S5HPI6	6.4e-93	77.82	Putative cytochrome c biosynthesis ccmC-like mitochondrial protein OS=Cucumis me...	[more]
G3EIZ2	6.9e-87	75.20	Putative cytochrome c biosynthesis ccmC-like mitochondrial protein OS=Cucumis sa...	[more]
A0A451F281	8.2e-80	73.28	Putative cytochrome c biosynthesis ccmC-like mitochondrial protein OS=Acacia lig...	[more]

BLAST of IVF0003363 vs. NCBI nr


Match Name	E-value	Identity	Description
AEN56104.1	1.97e-118	77.82	cytochrome c biogenesis C [Cucumis melo subsp. melo] >AZP40290.1 cytochrome c bi...	[more]
KAA0056125.1	2.20e-116	77.82	cytochrome c biogenesis C [Cucumis melo var. makuwa]	[more]
YP_004849340.1	1.57e-110	75.20	cytochrome c biogenesis C [Cucumis sativus] >ADZ10767.1 cytochrome c biogenesis ...	[more]
YP_009560009.1	2.99e-101	73.28	cytochrome c biogenesis C [Acacia ligulata] >AZZ06834.1 cytochrome c biogenesis ...	[more]
YP_009913608.1	3.61e-101	73.71	cytochrome c biogenesis C [Luffa acutangula] >QLJ93005.1 cytochrome c biogenesis...	[more]

BLAST of IVF0003363 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G07771.2	6.8e-79	70.69	Cytochrome C assembly protein	[more]
ATMG00900.1	6.8e-79	70.69	cytochrome C biogenesis 256	[more]
AT2G07681.1	9.6e-65	69.00	Cytochrome C assembly protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003557	Cytochrome c-type biogenesis protein CcmC	PRINTS	PR01386	CCMCBIOGNSIS	coord: 59..79 score: 38.41 coord: 42..59 score: 60.74
None	No IPR available	PANTHER	PTHR30071:SF17	CYTOCHROME C ASSEMBLY PROTEIN-RELATED	coord: 11..179
IPR045062	Cytochrome c-type biogenesis protein CcsA/CcmC	PANTHER	PTHR30071	HEME EXPORTER PROTEIN C	coord: 11..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0003363.2	IVF0003363.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017004	cytochrome complex assembly
biological_process	GO:0015886	heme transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031966	mitochondrial membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0020037	heme binding
molecular_function	GO:0015232	heme transmembrane transporter activity