IVF0003346 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAAGTGTATCTTTAATATGATAGCTCAGAGGTTGGTTGACAGTGTTGGGTAAGCTCAACCAGATCTTGAGAAGAAATATGGCATTGAGAGGATGAAAGCTTTAGGTGCCACTCCGTTTAAGGGGATTGTAGTTCCTGCTGAAGTAGAGGCATGGTTGTCGTTGATAGAGAAATGTTTTGGAGTTATATGTTGTTCGAAAGACAGAAAAGTGGAACTGGCTACATTCCTGCTTCAAAAAGAAGTGGAGGATTGGTGA ATGGAAAAGTGTATCTTTAATATGATAGCTCAGAGGTTGGTTGACAGTAAATATGGCATTGAGAGGATGAAAGCTTTAGGTGCCACTCCGTTTAAGGGGATTGTAGTTCCTGCTGAAGTAGAGGCATGGTTGTCGTTGATAGAGAAATGTTTTGGAGTTATATGTTGTTCGAAAGACAGAAAAGTGGAACTGGCTACATTCCTGCTTCAAAAAGAAGTGGAGGATTGGTGA ATGGAAAAGTGTATCTTTAATATGATAGCTCAGAGGTTGGTTGACAGTAAATATGGCATTGAGAGGATGAAAGCTTTAGGTGCCACTCCGTTTAAGGGGATTGTAGTTCCTGCTGAAGTAGAGGCATGGTTGTCGTTGATAGAGAAATGTTTTGGAGTTATATGTTGTTCGAAAGACAGAAAAGTGGAACTGGCTACATTCCTGCTTCAAAAAGAAGTGGAGGATTGGTGA MEKCIFNMIAQRLVDSKYGIERMKALGATPFKGIVVPAEVEAWLSLIEKCFGVICCSKDRKVELATFLLQKEVEDW Homology
BLAST of IVF0003346 vs. ExPASy TrEMBL
Match: A0A5A7SKG0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G00920 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 3.4e-20 Identity = 57/85 (67.06%), Postives = 62/85 (72.94%), Query Frame = 0
BLAST of IVF0003346 vs. ExPASy TrEMBL
Match: A0A5A7SJ99 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold305G00100 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 1.1e-15 Identity = 46/86 (53.49%), Postives = 57/86 (66.28%), Query Frame = 0
BLAST of IVF0003346 vs. ExPASy TrEMBL
Match: A0A5A7UZM6 (Gag protease polyprotein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00750 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 2.5e-15 Identity = 42/62 (67.74%), Postives = 47/62 (75.81%), Query Frame = 0
BLAST of IVF0003346 vs. ExPASy TrEMBL
Match: A0A5A7TBS0 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G002900 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 3.3e-15 Identity = 44/67 (65.67%), Postives = 48/67 (71.64%), Query Frame = 0
BLAST of IVF0003346 vs. ExPASy TrEMBL
Match: A0A5D3CTK6 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold892G00030 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 3.3e-15 Identity = 44/67 (65.67%), Postives = 48/67 (71.64%), Query Frame = 0
BLAST of IVF0003346 vs. NCBI nr
Match: KAA0025769.1 (hypothetical protein E6C27_scaffold34G00120 [Cucumis melo var. makuwa] >TYK09684.1 hypothetical protein E5676_scaffold447G00920 [Cucumis melo var. makuwa]) HSP 1 Score: 105 bits (262), Expect = 2.16e-26 Identity = 57/85 (67.06%), Postives = 62/85 (72.94%), Query Frame = 0
BLAST of IVF0003346 vs. NCBI nr
Match: XP_038882393.1 (uncharacterized protein LOC120073661 [Benincasa hispida]) HSP 1 Score: 93.6 bits (231), Expect = 7.49e-21 Identity = 48/86 (55.81%), Postives = 57/86 (66.28%), Query Frame = 0
BLAST of IVF0003346 vs. NCBI nr
Match: XP_038877203.1 (uncharacterized protein LOC120069501 [Benincasa hispida]) HSP 1 Score: 88.2 bits (217), Expect = 8.72e-20 Identity = 41/62 (66.13%), Postives = 49/62 (79.03%), Query Frame = 0
BLAST of IVF0003346 vs. NCBI nr
Match: KAA0035024.1 (hypothetical protein E6C27_scaffold57G00740 [Cucumis melo var. makuwa] >TYK02358.1 hypothetical protein E5676_scaffold155G00590 [Cucumis melo var. makuwa]) HSP 1 Score: 86.3 bits (212), Expect = 9.52e-20 Identity = 46/83 (55.42%), Postives = 57/83 (68.67%), Query Frame = 0
BLAST of IVF0003346 vs. NCBI nr
Match: XP_038896416.1 (uncharacterized protein LOC120084680 [Benincasa hispida]) HSP 1 Score: 88.6 bits (218), Expect = 2.98e-19 Identity = 48/86 (55.81%), Postives = 55/86 (63.95%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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