IVF0003181 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCACATATATATATTTCACCGTTCACTTTTCACATTCATCCCCAATTCCGATCATTCATATTTCCCTCCGCCGGCCAAATAACAGAGAGAAATCCCCGGCCAATATATAGCATGGGCAACTTTGCTCTGTTTACTGTTCTGTTTTTTCTTTCCCCATTTATTGGCCTCGTTTTCGCTTACGATTCGCCTGCCGCCTCCCCAAAACCCCCTAAAACGGCTCATTCTCCATCTCCGGCGCATTCTCCGGTTGTTTCGCCGCCGAGTCGCTCTTTATCTCCGTCTAAATCCCCGACTGCTTCTCCACCGATGTTAACTCCGGAAATATCTCCGGCATTGGCTACCCCACCATCTGTAGCGCCCTCGAAGGCCCCGGCAGCGGTACCTATTTCTTCGCCGAGTGAAAATTCTCCGGTTTCGTCCCCGCCGTCTCCTCTCCCTTTCGATGCTTCTCCGGTTGGGGCTCCAGTGGAACCAGAAATTCCCGCAAATCCGATTTCTGGAGGGTCTCCGGTCGGGACGCCGTCAATATTTCCGTCGAGTAGCAGCCCACCGATGGCTACTCCGACAAACTTAGCTCCGGAAACGGCGGAGCGGCCTGGAAACGACGCGTCGGCGTCAGGAAGGTACAAGATCGGGGTGGAGGTTATGTTGAGTGGGCTTTCTATTTGGGCTGCTTGGGCCTTTTGAAATTAGGCACATATGTTTAAATTTTGATGATTGGCTGTTTTGTGTTTCTAACAATTGTTTTGAGATTATATTGTATTCTTTTTTGACTCATTATGTGGGG CTCACATATATATATTTCACCGTTCACTTTTCACATTCATCCCCAATTCCGATCATTCATATTTCCCTCCGCCGGCCAAATAACAGAGAGAAATCCCCGGCCAATATATAGCATGGGCAACTTTGCTCTGTTTACTGTTCTGTTTTTTCTTTCCCCATTTATTGGCCTCGTTTTCGCTTACGATTCGCCTGCCGCCTCCCCAAAACCCCCTAAAACGGCTCATTCTCCATCTCCGGCGCATTCTCCGGTTGTTTCGCCGCCGAGTCGCTCTTTATCTCCGTCTAAATCCCCGACTGCTTCTCCACCGATGTTAACTCCGGAAATATCTCCGGCATTGGCTACCCCACCATCTGTAGCGCCCTCGAAGGCCCCGGCAGCGGTACCTATTTCTTCGCCGAGTGAAAATTCTCCGGTTTCGTCCCCGCCGTCTCCTCTCCCTTTCGATGCTTCTCCGGTTGGGGCTCCAGTGGAACCAGAAATTCCCGCAAATCCGATTTCTGGAGGGTCTCCGGTCGGGACGCCGTCAATATTTCCGTCGAGTAGCAGCCCACCGATGGCTACTCCGACAAACTTAGCTCCGGAAACGGCGGAGCGGCCTGGAAACGACGCGTCGGCGTCAGGAAGGTACAAGATCGGGGTGGAGGTTATGTTGAGTGGGCTTTCTATTTGGGCTGCTTGGGCCTTTTGAAATTAGGCACATATGTTTAAATTTTGATGATTGGCTGTTTTGTGTTTCTAACAATTGTTTTGAGATTATATTGTATTCTTTTTTGACTCATTATGTGGGG ATGGGCAACTTTGCTCTGTTTACTGTTCTGTTTTTTCTTTCCCCATTTATTGGCCTCGTTTTCGCTTACGATTCGCCTGCCGCCTCCCCAAAACCCCCTAAAACGGCTCATTCTCCATCTCCGGCGCATTCTCCGGTTGTTTCGCCGCCGAGTCGCTCTTTATCTCCGTCTAAATCCCCGACTGCTTCTCCACCGATGTTAACTCCGGAAATATCTCCGGCATTGGCTACCCCACCATCTGTAGCGCCCTCGAAGGCCCCGGCAGCGGTACCTATTTCTTCGCCGAGTGAAAATTCTCCGGTTTCGTCCCCGCCGTCTCCTCTCCCTTTCGATGCTTCTCCGGTTGGGGCTCCAGTGGAACCAGAAATTCCCGCAAATCCGATTTCTGGAGGGTCTCCGGTCGGGACGCCGTCAATATTTCCGTCGAGTAGCAGCCCACCGATGGCTACTCCGACAAACTTAGCTCCGGAAACGGCGGAGCGGCCTGGAAACGACGCGTCGGCGTCAGGAAGGTACAAGATCGGGGTGGAGGTTATGTTGAGTGGGCTTTCTATTTGGGCTGCTTGGGCCTTTTGA MGNFALFTVLFFLSPFIGLVFAYDSPAASPKPPKTAHSPSPAHSPVVSPPSRSLSPSKSPTASPPMLTPEISPALATPPSVAPSKAPAAVPISSPSENSPVSSPPSPLPFDASPVGAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTNLAPETAERPGNDASASGRYKIGVEVMLSGLSIWAAWAF Homology
BLAST of IVF0003181 vs. ExPASy Swiss-Prot
Match: Q9SN46 (Leucine-rich repeat extensin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=LRX5 PE=2 SV=2) HSP 1 Score: 49.7 bits (117), Expect = 4.3e-05 Identity = 61/155 (39.35%), Postives = 77/155 (49.68%), Query Frame = 0
BLAST of IVF0003181 vs. ExPASy Swiss-Prot
Match: O10341 (Uncharacterized 29.3 kDa protein OS=Orgyia pseudotsugata multicapsid polyhedrosis virus OX=262177 GN=ORF92 PE=4 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 8.2e-04 Identity = 52/121 (42.98%), Postives = 63/121 (52.07%), Query Frame = 0
BLAST of IVF0003181 vs. ExPASy TrEMBL
Match: A0A5A7VJY8 (Extensin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00140 PE=4 SV=1) HSP 1 Score: 347.4 bits (890), Expect = 3.7e-92 Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0
BLAST of IVF0003181 vs. ExPASy TrEMBL
Match: A0A0A0L269 (Lipid binding protein OS=Cucumis sativus OX=3659 GN=Csa_3G047810 PE=4 SV=1) HSP 1 Score: 310.5 bits (794), Expect = 5.0e-81 Identity = 173/192 (90.10%), Postives = 182/192 (94.79%), Query Frame = 0
BLAST of IVF0003181 vs. ExPASy TrEMBL
Match: A0A6J1EWE6 (gibberellin-regulated protein 14-like OS=Cucurbita moschata OX=3662 GN=LOC111438730 PE=4 SV=1) HSP 1 Score: 247.7 bits (631), Expect = 4.0e-62 Identity = 144/201 (71.64%), Postives = 161/201 (80.10%), Query Frame = 0
BLAST of IVF0003181 vs. ExPASy TrEMBL
Match: A0A6J1L107 (gibberellin-regulated protein 14-like OS=Cucurbita maxima OX=3661 GN=LOC111500173 PE=4 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 3.7e-60 Identity = 142/201 (70.65%), Postives = 158/201 (78.61%), Query Frame = 0
BLAST of IVF0003181 vs. ExPASy TrEMBL
Match: A0A1S4DX95 (leucine-rich repeat extensin-like protein 5 OS=Cucumis melo OX=3656 GN=LOC107990970 PE=4 SV=1) HSP 1 Score: 229.6 bits (584), Expect = 1.1e-56 Identity = 125/126 (99.21%), Postives = 125/126 (99.21%), Query Frame = 0
BLAST of IVF0003181 vs. NCBI nr
Match: KAA0065729.1 (extensin-like [Cucumis melo var. makuwa] >TYK13755.1 extensin-like [Cucumis melo var. makuwa]) HSP 1 Score: 343 bits (880), Expect = 2.39e-118 Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0
BLAST of IVF0003181 vs. NCBI nr
Match: XP_011652729.1 (extensin [Cucumis sativus] >KGN56020.1 hypothetical protein Csa_011485 [Cucumis sativus]) HSP 1 Score: 306 bits (784), Expect = 1.06e-103 Identity = 173/192 (90.10%), Postives = 182/192 (94.79%), Query Frame = 0
BLAST of IVF0003181 vs. NCBI nr
Match: XP_038904208.1 (calphotin-like [Benincasa hispida]) HSP 1 Score: 265 bits (676), Expect = 4.01e-87 Identity = 157/201 (78.11%), Postives = 167/201 (83.08%), Query Frame = 0
BLAST of IVF0003181 vs. NCBI nr
Match: XP_022932347.1 (gibberellin-regulated protein 14-like [Cucurbita moschata]) HSP 1 Score: 243 bits (621), Expect = 9.32e-79 Identity = 144/201 (71.64%), Postives = 161/201 (80.10%), Query Frame = 0
BLAST of IVF0003181 vs. NCBI nr
Match: XP_023552940.1 (gibberellin-regulated protein 14-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 242 bits (617), Expect = 3.31e-78 Identity = 143/197 (72.59%), Postives = 160/197 (81.22%), Query Frame = 0
BLAST of IVF0003181 vs. TAIR 10
Match: AT4G18670.1 (Leucine-rich repeat (LRR) family protein ) HSP 1 Score: 49.7 bits (117), Expect = 3.1e-06 Identity = 61/155 (39.35%), Postives = 77/155 (49.68%), Query Frame = 0
BLAST of IVF0003181 vs. TAIR 10
Match: AT3G22142.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 43.5 bits (101), Expect = 2.2e-04 Identity = 56/157 (35.67%), Postives = 79/157 (50.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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