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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGGGAATCAGAATCTTTTGCTATCTCTGTGTATGTACGAAATGGGGGAGGGGGATGAGAGATTTGACACATTTCAAACAAGCCCACTTCCCATCTTTGATTGAATTGGTATGAAGTTGGTCAAATCACTACGCATGTGTGTGGACCATGTAAGATAGAGCTGTAGAATGAGATAAAAGGGGTGAAGGAGAATTGGGAAGTGCTGTTCGTCATTGATTGATTATTTCTTTCCCGCTTTTACTTTTTTAATGTTATTTTCATAAAGTTGGTCGATCGGATCGATCCCACATCCCACCCTGTCTTTCAAATGTTAATTATTAGTATAATAATGATTAAAAATGGCATCTGAAGCTTGTTGACGAAAGACAAAGAGAAAATTAATAACAGAAAACAGGAAGAAAGAGAGAGTTTTGTCTATATTCTCAATAATCCGTCCAACTAGCCAGTTCATAGTGCTCTCAATTCACAGAAAGAAAGATTACTGAGCCTTTTTCACTGTCCATTCTCTCTCTTTCCAGACTATTCCCCATCTTCAACCCTTTTGTCATTATGCGTTTTCTGCCTGCGATATGTTATCTTTCCTGTCTCTGTCCCATTCCCTCTCCTGGGTGTCTCCTTTTTCTCCCTTCTGAGCTCACCTTTTCGAGTAAACTATCTTAATTTTCGAGTTGTCCACTGTTTTTCCTTTACAATTGGGCGGTAATGACTACTGCTCTGGAGTTTACTGTTTCTAGCTTAGTTGGTCTTGCTTTTCAATTCATTCTTGAAGTTTCATTTGAAATTCAATAGGTTGGCAGAGTGTGCAGTTTTGTTGGTTTTTGGAGGTTCCTAGGCTTTAGGGGGATAAAGGGCTTGATGATTGATTCACTGAGATCTATTGTTCAATAGTTGCCTTCTCTTCTCTGAACTTCACATCTTTCTCTTCTTTCTTCTCTTTGCTTTGGAGTTGCAGGTTTTAGCTAGAGCTAGCTATTAG mRNA sequence ATGGGAATCAGAATCTTTTGCTATCTCTGTATTACTGAGCCTTTTTCACTGTCCATTCTCTCTCTTTCCAGACTATTCCCCATCTTCAACCCTTTTGTCATTATGCGTTTTCTGCCTGCGATATGTTATCTTTCCTGTCTCTGTCCCATTCCCTCTCCTGGGTGTCTCCTTTTTCTCCCTTCTGATTGTCCACTGTTTTTCCTTTACAATTGGGCGGTTTTAGCTAGAGCTAGCTATTAG Coding sequence (CDS) ATGGGAATCAGAATCTTTTGCTATCTCTGTATTACTGAGCCTTTTTCACTGTCCATTCTCTCTCTTTCCAGACTATTCCCCATCTTCAACCCTTTTGTCATTATGCGTTTTCTGCCTGCGATATGTTATCTTTCCTGTCTCTGTCCCATTCCCTCTCCTGGGTGTCTCCTTTTTCTCCCTTCTGATTGTCCACTGTTTTTCCTTTACAATTGGGCGGTTTTAGCTAGAGCTAGCTATTAG Protein sequence MGIRIFCYLCITEPFSLSILSLSRLFPIFNPFVIMRFLPAICYLSCLCPIPSPGCLLFLPSDCPLFFLYNWAVLARASY
Homology
BLAST of IVF0003171 vs. ExPASy TrEMBL
Match: A0A0A0KCX7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G355390 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 2.1e-17 Identity = 58/95 (61.05%), Postives = 62/95 (65.26%), Query Frame = 0 Query: 1 MGIRIFCYLCITEPFSLSILSLSRLFPIFNPFVIMR----FLPAICYLSCLCPIPSPGCL 60 MGIRIFCYL SL S LFP ++P + FLPAICYLSCLCPIPSPGCL Sbjct: 1 MGIRIFCYLRKERLLSLFHCPFS-LFPDYSPSSALLSSCVFLPAICYLSCLCPIPSPGCL 60
Query: 61 LFLPSD------------CPLFFLYNWAVLARASY 80 LFLPS+ CPLFFLYNWAVLARASY Sbjct: 61 LFLPSELAFLSKLSQFSSCPLFFLYNWAVLARASY 94
BLAST of IVF0003171 vs. NCBI nr
Match: KGN47520.1 (hypothetical protein Csa_018927 [Cucumis sativus]) HSP 1 Score: 97.1 bits (240), Expect = 3.70e-24 Identity = 58/95 (61.05%), Postives = 62/95 (65.26%), Query Frame = 0 Query: 1 MGIRIFCYLCITEPFSLSILSLSRLFPIFNPFVIMR----FLPAICYLSCLCPIPSPGCL 60 MGIRIFCYL SL S LFP ++P + FLPAICYLSCLCPIPSPGCL Sbjct: 1 MGIRIFCYLRKERLLSLFHCPFS-LFPDYSPSSALLSSCVFLPAICYLSCLCPIPSPGCL 60
Query: 61 LFLPSD------------CPLFFLYNWAVLARASY 79 LFLPS+ CPLFFLYNWAVLARASY Sbjct: 61 LFLPSELAFLSKLSQFSSCPLFFLYNWAVLARASY 94
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0KCX7 | 2.1e-17 | 61.05 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G355390 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
KGN47520.1 | 3.70e-24 | 61.05 | hypothetical protein Csa_018927 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
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