IVF0003125 (gene) Melon (IVF77) v1

Overview


Name	IVF0003125
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	protein WHAT'S THIS FACTOR 1 homolog
Location	chr01: 5570180 .. 5572136 (-)
RNA-Seq Expression	IVF0003125
Synteny	IVF0003125

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGAAAATATCCCTACGAATTTGGAAGAGGGTTTTTCCCGATGAAGATAAACCCTAATACTTTCCCTTCAATTAGCTCTGGATTCAGCTTCATAGCTTTTACCTAGGCAGGTGAGTTCGCTCGATTATTCTTCTCCATTTTTGTTCTGTTGTTGTTTCTTCCATCTCACAAAGCAATTGATACATATGGATTCCAAGTTACTGCTCTATTCCCCAAAAGCTTCGCTATCCATATCCGTACCTTTCATTCTTGGGCACAAATCTTATTACTCTGTGAAATCTCAATTTTGGGGTAAGAATTTGGATTTGCGAAACAGAAATGATAATTTAAGAAAAGCCCATGACCCTTTTCAACCCATTAGAGCTGTTGTGAAACGGAGGAAAGAGCTTCCGTTTGATAATGTAATACAAAGGGATAAGAAGCTGAAATTAGTTATGCGAATTAGGAAGATTCTAGTTCAGCAACCTGATAGAGTTATGTCACTTAAGGAATTGGGTAAATTCAGGAGAGATTTAGGTCTCGAGAAAAAGAGGAGGCTAATTGCATTGTTGAAGAAGTTCCCTGCGGTATTTGAAGTTGTAGAAGAAGGGGCATTTTCCCTGAAATTCAAATTAACGGCCGAGGCCGAAAGGTTGTATTTGGAGGAGTTGAAGATCAGAAATGAGATGGAAGGTTTGTTGGTTATTAAGCTTAGGAAGCTATTGATGATGTCTGCTGATAAACGAATATTGTTGGAGAAGATTGCACATTTGAGGACTGATTTCGGTCTTCCTTTAGAATTTCGCGACACAATATGTCACCGTTATCCACAGTACTTTAGAGTTGTGGCAACCGAGCGCGGTCCAGCCCTTGAATTGACACATTGGGATCCCGAACTTGCTGTTTCTGCAGCAGAGTTAGCAGAAGAAGAAAACCGAGCTAGAGAATTGGAAGAGAAGAACCTAATTATCGACCGACCGTTGAAGTTTAATCGAGTTAAGCTACCTAAGGGGCTTAATCTTTCAAAGAGTGAGATGAGGAAAATTAGTCAGTTTAGGGACATTCCTTATATTTCTCCTTATTCTGATTTCTCTGGGATTAAGGCAGGTACTCCCCAGAAAGAGAAACATGCTTGCGGGGTTGTTCATGAGATTTTAAACCTTACACTTGAGAAGAGAACTCTAGTGGATCATCTCACTCATTTCCGCGAGGAGTTTAGGTTCTCCCAGCAGCTGAGGGGGATGCTAATAAGGCATCCGGATATGTTTTACGTCTCATTGAAAGGGGATAGGGATTCAGTCTTCCTCCGAGAAGCATATCGTGATTCTCAGTTGATCGACAAAGATAGGTTATTAATCATAAAAGAGAAACTTAGGGCTCTTGTTGCCGTTCCTCGGTTCCGAAGCAGAGGAGCTTCCAATGGTGACACGAAAGGGGGAGATACAAATCAGCCCAGTGATATGAGTGGTGAAGAGTGGTCTGATGTTGATAATCTTTTGGATGATGATGAATTTGATGATGATGAATTTGATGATGATGAATTTGATGATGATAACAATGAAGCTTTTGAGGATGACTGGAGTGATGAAGATGATACCCCACCAAGTTTCAATGGAGATCAAGATGGAGAATCCATAAATATCGGATCAAGGAAGCAAAAACAGGTCAATGACTTGCAAAAGGTCGGTCAGAGTCGTCTTTCTCCTGTATTACCCGATGGAAGGCCCCGAGAAAGATGGTGAGAGCCATAAACTTGTCTATTTTGTTGTATACTATTAGAGATTGTGCTCTGCTATGTAGTAACGATAGTTTCCTTGCGAAATAGCAATGAAAGCTTTCCTCGTATCATCAAATTTATTTTATGCATATTGTTGTACTCTTTGCATTTCTTTTAGGCGTGTAAACATTTGGAGTTTGTTTGGCTCACTTGTGTTAAATAACTCTACCTCAATAAGGTTTTCTATTGAAATTTGTACA

mRNA sequence

GAAGAAAATATCCCTACGAATTTGGAAGAGGGTTTTTCCCGATGAAGATAAACCCTAATACTTTCCCTTCAATTAGCTCTGGATTCAGCTTCATAGCTTTTACCTAGGCAGGTGAGTTCGCTCGATTATTCTTCTCCATTTTTGTTCTGTTGTTGTTTCTTCCATCTCACAAAGCAATTGATACATATGGATTCCAAGTTACTGCTCTATTCCCCAAAAGCTTCGCTATCCATATCCGTACCTTTCATTCTTGGGCACAAATCTTATTACTCTGTGAAATCTCAATTTTGGGGTAAGAATTTGGATTTGCGAAACAGAAATGATAATTTAAGAAAAGCCCATGACCCTTTTCAACCCATTAGAGCTGTTGTGAAACGGAGGAAAGAGCTTCCGTTTGATAATGTAATACAAAGGGATAAGAAGCTGAAATTAGTTATGCGAATTAGGAAGATTCTAGTTCAGCAACCTGATAGAGTTATGTCACTTAAGGAATTGGGTAAATTCAGGAGAGATTTAGGTCTCGAGAAAAAGAGGAGGCTAATTGCATTGTTGAAGAAGTTCCCTGCGGTATTTGAAGTTGTAGAAGAAGGGGCATTTTCCCTGAAATTCAAATTAACGGCCGAGGCCGAAAGGTTGTATTTGGAGGAGTTGAAGATCAGAAATGAGATGGAAGGTTTGTTGGTTATTAAGCTTAGGAAGCTATTGATGATGTCTGCTGATAAACGAATATTGTTGGAGAAGATTGCACATTTGAGGACTGATTTCGGTCTTCCTTTAGAATTTCGCGACACAATATGTCACCGTTATCCACAGTACTTTAGAGTTGTGGCAACCGAGCGCGGTCCAGCCCTTGAATTGACACATTGGGATCCCGAACTTGCTGTTTCTGCAGCAGAGTTAGCAGAAGAAGAAAACCGAGCTAGAGAATTGGAAGAGAAGAACCTAATTATCGACCGACCGTTGAAGTTTAATCGAGTTAAGCTACCTAAGGGGCTTAATCTTTCAAAGAGTGAGATGAGGAAAATTAGTCAGTTTAGGGACATTCCTTATATTTCTCCTTATTCTGATTTCTCTGGGATTAAGGCAGGTACTCCCCAGAAAGAGAAACATGCTTGCGGGGTTGTTCATGAGATTTTAAACCTTACACTTGAGAAGAGAACTCTAGTGGATCATCTCACTCATTTCCGCGAGGAGTTTAGGTTCTCCCAGCAGCTGAGGGGGATGCTAATAAGGCATCCGGATATGTTTTACGTCTCATTGAAAGGGGATAGGGATTCAGTCTTCCTCCGAGAAGCATATCGTGATTCTCAGTTGATCGACAAAGATAGGTTATTAATCATAAAAGAGAAACTTAGGGCTCTTGTTGCCGTTCCTCGGTTCCGAAGCAGAGGAGCTTCCAATGGTGACACGAAAGGGGGAGATACAAATCAGCCCAGTGATATGAGTGGTGAAGAGTGGTCTGATGTTGATAATCTTTTGGATGATGATGAATTTGATGATGATGAATTTGATGATGATGAATTTGATGATGATAACAATGAAGCTTTTGAGGATGACTGGAGTGATGAAGATGATACCCCACCAAGTTTCAATGGAGATCAAGATGGAGAATCCATAAATATCGGATCAAGGAAGCAAAAACAGGTCAATGACTTGCAAAAGGTCGGTCAGAGTCGTCTTTCTCCTGTATTACCCGATGGAAGGCCCCGAGAAAGATGGTGAGAGCCATAAACTTGTCTATTTTGTTGTATACTATTAGAGATTGTGCTCTGCTATGTAGTAACGATAGTTTCCTTGCGAAATAGCAATGAAAGCTTTCCTCGTATCATCAAATTTATTTTATGCATATTGTTGTACTCTTTGCATTTCTTTTAGGCGTGTAAACATTTGGAGTTTGTTTGGCTCACTTGTGTTAAATAACTCTACCTCAATAAGGTTTTCTATTGAAATTTGTACA

Coding sequence (CDS)

ATGGATTCCAAGTTACTGCTCTATTCCCCAAAAGCTTCGCTATCCATATCCGTACCTTTCATTCTTGGGCACAAATCTTATTACTCTGTGAAATCTCAATTTTGGGGTAAGAATTTGGATTTGCGAAACAGAAATGATAATTTAAGAAAAGCCCATGACCCTTTTCAACCCATTAGAGCTGTTGTGAAACGGAGGAAAGAGCTTCCGTTTGATAATGTAATACAAAGGGATAAGAAGCTGAAATTAGTTATGCGAATTAGGAAGATTCTAGTTCAGCAACCTGATAGAGTTATGTCACTTAAGGAATTGGGTAAATTCAGGAGAGATTTAGGTCTCGAGAAAAAGAGGAGGCTAATTGCATTGTTGAAGAAGTTCCCTGCGGTATTTGAAGTTGTAGAAGAAGGGGCATTTTCCCTGAAATTCAAATTAACGGCCGAGGCCGAAAGGTTGTATTTGGAGGAGTTGAAGATCAGAAATGAGATGGAAGGTTTGTTGGTTATTAAGCTTAGGAAGCTATTGATGATGTCTGCTGATAAACGAATATTGTTGGAGAAGATTGCACATTTGAGGACTGATTTCGGTCTTCCTTTAGAATTTCGCGACACAATATGTCACCGTTATCCACAGTACTTTAGAGTTGTGGCAACCGAGCGCGGTCCAGCCCTTGAATTGACACATTGGGATCCCGAACTTGCTGTTTCTGCAGCAGAGTTAGCAGAAGAAGAAAACCGAGCTAGAGAATTGGAAGAGAAGAACCTAATTATCGACCGACCGTTGAAGTTTAATCGAGTTAAGCTACCTAAGGGGCTTAATCTTTCAAAGAGTGAGATGAGGAAAATTAGTCAGTTTAGGGACATTCCTTATATTTCTCCTTATTCTGATTTCTCTGGGATTAAGGCAGGTACTCCCCAGAAAGAGAAACATGCTTGCGGGGTTGTTCATGAGATTTTAAACCTTACACTTGAGAAGAGAACTCTAGTGGATCATCTCACTCATTTCCGCGAGGAGTTTAGGTTCTCCCAGCAGCTGAGGGGGATGCTAATAAGGCATCCGGATATGTTTTACGTCTCATTGAAAGGGGATAGGGATTCAGTCTTCCTCCGAGAAGCATATCGTGATTCTCAGTTGATCGACAAAGATAGGTTATTAATCATAAAAGAGAAACTTAGGGCTCTTGTTGCCGTTCCTCGGTTCCGAAGCAGAGGAGCTTCCAATGGTGACACGAAAGGGGGAGATACAAATCAGCCCAGTGATATGAGTGGTGAAGAGTGGTCTGATGTTGATAATCTTTTGGATGATGATGAATTTGATGATGATGAATTTGATGATGATGAATTTGATGATGATAACAATGAAGCTTTTGAGGATGACTGGAGTGATGAAGATGATACCCCACCAAGTTTCAATGGAGATCAAGATGGAGAATCCATAAATATCGGATCAAGGAAGCAAAAACAGGTCAATGACTTGCAAAAGGTCGGTCAGAGTCGTCTTTCTCCTGTATTACCCGATGGAAGGCCCCGAGAAAGATGGTGA

Protein sequence

MDSKLLLYSPKASLSISVPFILGHKSYYSVKSQFWGKNLDLRNRNDNLRKAHDPFQPIRAVVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGIKAGTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTKGGDTNQPSDMSGEEWSDVDNLLDDDEFDDDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFNGDQDGESINIGSRKQKQVNDLQKVGQSRLSPVLPDGRPRERW

Homology

[Close]

BLAST of IVF0003125 vs. ExPASy Swiss-Prot
Match: A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)

HSP 1 Score: 592.4 bits (1526), Expect = 4.8e-168
Identity = 332/540 (61.48%), Postives = 407/540 (75.37%), Query Frame = 0


Query: 1   MDSKLLLYSPKASLSISVPFILGHKSYYSVK------------SQFWGKNLDLRNRN--- 60
           M+ KLLL + K  L +S       K+  SVK            SQF G+ L L N+    
Sbjct: 1   MEPKLLLSAHK-PLFVSCNSPFNEKTKLSVKSGLPMSTIRAARSQFMGEGLILGNKYGFW 60

Query: 61  DNLRKAHDPFQPIRAVVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGK 120
              RK     +P+RA VKRRKEL FD+V+QRDKKLKLV+ IRKILV QPDR+MSL+ LGK
Sbjct: 61  STSRKTRVVVEPVRAAVKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGK 120

Query: 121 FRRDLGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLL 180
           +RRDLGL+K+RR IALL+K+P VFE+VEEGA+SL+FK+T+EAERLYL+E++IRNE+E +L
Sbjct: 121 YRRDLGLKKRRRFIALLRKYPGVFEIVEEGAYSLRFKMTSEAERLYLDEMRIRNELEDVL 180

Query: 181 VIKLRKLLMMSADKRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELT 240
           V+KLRKL+MMS DKRILLEKI+HL+TD GLPLEFRDTIC RYPQYFRVV T RGPALELT
Sbjct: 181 VVKLRKLVMMSIDKRILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTPRGPALELT 240

Query: 241 HWDPELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRD 300
           HWDPELAVSAAEL+E++NR RE EE+NLIIDRP KFNRVKLP+GLNLSKSE RKISQFRD
Sbjct: 241 HWDPELAVSAAELSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRD 300

Query: 301 IPYISPYSDFSGIKAGTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRG 360
           + YISPY DFS +++GT +KEKHACGV+HE+L+LT EKRTLVDHLTHFREEFRFSQQLRG
Sbjct: 301 MQYISPYKDFSHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRG 360

Query: 361 MLIRHPDMFYVSLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASN 420
           MLIRHPD+FYVSLKG+RDSVFLREAYR+S+LIDKD L ++KEK+RALV+VPRF  RG   
Sbjct: 361 MLIRHPDLFYVSLKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPRFPRRGGPR 420

Query: 421 GDTKGGDT----------NQPSDMSGEEWSDVDNLLDDDEFDDDEFDDDEFDDDNNEAFE 480
            D +G +            +  +   EEWSDVD  L+ ++  +D  DD ++ DD      
Sbjct: 421 KDEEGREVEIDGSDADGEEEEEESDAEEWSDVDGYLEGEDGGND--DDGDWTDDEG---- 480

Query: 481 DDWSDEDDTPPSFNGDQDGE---SINIG-SRKQKQVNDLQKVGQSRLSPVLPDGRPRERW 512
                E+D PP+F+ D + E   S+ IG S   ++ +  +K  +  L+PV PDG PRE+W
Sbjct: 481 -----EEDVPPNFDDDDEDEEEDSVKIGLSPSSRKSSSPRKKEEKVLTPVFPDGTPREKW 528

[Close]

BLAST of IVF0003125 vs. ExPASy Swiss-Prot
Match: Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 553.1 bits (1424), Expect = 3.2e-156
Identity = 329/528 (62.31%), Postives = 393/528 (74.43%), Query Frame = 0


Query: 1   MDSKLLLY---SPKASLSISVPFILGHKSYYSVKSQFWGKNLDLRNRNDNLRKAHDPFQP 60
           MD+KLLL    SP A+L         H      KS F G +L L +    LR    P  P
Sbjct: 1   MDAKLLLLPFPSPPATL---------HHHPPPPKSLFLGASLPLLHPPPPLRLLR-PGAP 60

Query: 61  IR------AVVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLG 120
            R      A VKRRKE+PFDNVIQRDKKLKLV+++R ILV  PDRVMSL++LG+FRRDLG
Sbjct: 61  RRLAVVAQAAVKRRKEIPFDNVIQRDKKLKLVLKLRNILVSNPDRVMSLRDLGRFRRDLG 120

Query: 121 LEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRK 180
           L +KRRLIALLK+FP VFEVVEEG +SL+F+LT  AERLYL+EL ++NE EGL V KLRK
Sbjct: 121 LTRKRRLIALLKRFPGVFEVVEEGVYSLRFRLTPAAERLYLDELHLKNESEGLAVTKLRK 180

Query: 181 LLMMSADKRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPEL 240
           LLMMS DKRIL+EKIAHL+ D GLP EFRDTIC RYPQYFRVV  +RGP LELTHWDPEL
Sbjct: 181 LLMMSQDKRILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRVVQMDRGPGLELTHWDPEL 240

Query: 241 AVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISP 300
           AVSAAE+AEEENRARE +E+NLIIDRPLKFNRVKLP+GL LS+ E R+++QF+++PYISP
Sbjct: 241 AVSAAEVAEEENRAREEQERNLIIDRPLKFNRVKLPQGLKLSRGEARRVAQFKEMPYISP 300

Query: 301 YSDFSGIKAGTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHP 360
           YSDFS +++G+ +KEKHACGVVHEIL+LTLEKRTLVDHLTHFREEFRFSQ LRGMLIRHP
Sbjct: 301 YSDFSHLRSGSAEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGMLIRHP 360

Query: 361 DMFYVSLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTKGG 420
           DMFYVSLKGDRDSVFLREAY++SQL++K +L+++KEK+RALVAVPRF  RG      +  
Sbjct: 361 DMFYVSLKGDRDSVFLREAYKNSQLVEKSKLVLLKEKMRALVAVPRFPRRGVPATSEEAD 420

Query: 421 DTNQPSDMSGEEWSDVDNLLDDDEFDDD------EFDDDEFDDDNNEAFEDDW-SDEDDT 480
            TN  + M   E SDV++  D+DE   D      E    + D D +  + D W  + DD+
Sbjct: 421 RTNGAAQML-SEGSDVED--DEDEGLSDMEDLISEISGGKSDTDYH--WGDGWVGENDDS 480

Query: 481 PPSFNGDQDGESI-NIGSRKQKQVNDLQKVGQSRLSPVLPDGRPRERW 512
           PP F  D DG S+  +    +K  N     G++ + PV PDGRPRERW
Sbjct: 481 PPDFE-DDDGSSLKEVKVTMKKTANSAN--GKAHV-PVFPDGRPRERW 509

[Close]

BLAST of IVF0003125 vs. ExPASy Swiss-Prot
Match: B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)

HSP 1 Score: 542.3 bits (1396), Expect = 5.7e-153
Identity = 314/519 (60.50%), Postives = 379/519 (73.03%), Query Frame = 0


Query: 1   MDSKLLLYSPKASLSISVPFILGHKSYYSVKSQFWGKNLDLRNRND--NLRKAHDPFQPI 60
           MD+KLLL  P A  + +           S KS F G  L    R     LR    P   +
Sbjct: 1   MDAKLLLPFPFAPAAAT----------RSPKSLFLGAPLPPPPRPPPFPLRLRPRPAAVV 60

Query: 61  -RAVVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRR 120
            +A VKRRKE PFD VIQRDKKLKLV+++R ILV QPDRVMSL+ELG+FRRDLGL +KRR
Sbjct: 61  AQAAVKRRKEAPFDTVIQRDKKLKLVLKLRNILVAQPDRVMSLRELGRFRRDLGLTRKRR 120

Query: 121 LIALLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSA 180
           LIALL++FP VF+VVEEG +SL+F+LT  AERLYL+EL++RNE EGL V KLRKLLMMS 
Sbjct: 121 LIALLRRFPGVFDVVEEGVYSLRFRLTPAAERLYLDELRLRNESEGLAVAKLRKLLMMSQ 180

Query: 181 DKRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAE 240
           +KRIL+EK+AHL+ D GLP EFRDT+C RYPQYFRVV  +RGPALELTHWDPELAVSAAE
Sbjct: 181 EKRILIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRVVRMDRGPALELTHWDPELAVSAAE 240

Query: 241 LAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSG 300
           LAEEE+RARE EE+NLIIDRPLKFNRV+LPKGL L++ E R+I++F+++PYISPY+DFS 
Sbjct: 241 LAEEESRAREAEERNLIIDRPLKFNRVRLPKGLKLTRGEARRIARFKEMPYISPYADFSH 300

Query: 301 IKAGTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVS 360
           +++G+ +KEKHACGVVHEIL+LT+EKRTLVDHLTHFREEFRFSQ LRGM+IRHPDMFYVS
Sbjct: 301 LRSGSDEKEKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGMIIRHPDMFYVS 360

Query: 361 LKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGA----SNGDTKGGDT 420
            KGDRDSVFLREAY+DSQL++K++L+++KEK+RALVAVPRF  R A       +   G  
Sbjct: 361 FKGDRDSVFLREAYKDSQLVEKNQLVLLKEKMRALVAVPRFPRRAAVGTGEEAEGMNGSL 420

Query: 421 NQPSDMSGEEWSDVDNLLDDDEFDDDEFDDDEFDDDNNEAFEDDW-SDEDDTPPSFNGDQ 480
                +S EE+ D D  L D E    E    + D D    + D W  + DD+PP F  D+
Sbjct: 421 QSRDQVSDEEYDDEDEGLSDMEDLISELSGGKSDADYE--WGDGWFGENDDSPPDFGDDE 480

Query: 481 DGESINIGSRKQKQVNDLQKVGQSRLSPVLPDGRPRERW 512
              ++ I                S   PV PDGRPRERW
Sbjct: 481 VKVAMKIAD---------GSANGSAPVPVFPDGRPRERW 498

[Close]

BLAST of IVF0003125 vs. ExPASy Swiss-Prot
Match: Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.8e-37
Identity = 113/362 (31.22%), Postives = 200/362 (55.25%), Query Frame = 0


Query: 54  PFQPIRAVVKRR---KELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDL 113
           PF     + K++   ++  +DN ++ +KK++ V++   +++ QP+  +++  L    R L
Sbjct: 33  PFSQSTTIPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRL 92

Query: 114 GLE-KKRRLIALLKKFPAVFEVVEEGAFSLKF-KLTAEAERLYLEELKIRNEMEGLL--- 173
           GL  K+    A L KFP VFE+ E     + + +LT +A    L++  IR+E E +L   
Sbjct: 93  GLGFKQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKA----LDQ--IRHEHEAVLDQI 152

Query: 174 ---VIKLRKLLMMSADKRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATE--RGP 233
              V +LRKL+MMS   RI LE +   RT+FGLP +F  ++  ++PQ+FR++  E  R  
Sbjct: 153 PDAVTRLRKLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDK 212

Query: 234 ALELTHWDPELAVSAAELAEEENRARELEEKNLIID-RPLKFN-RVKLPKGLNLSKSEMR 293
            +E+   DP L++ A E      R RE+E +   ID   ++F+  V  P G  + K    
Sbjct: 213 YIEIVEKDPNLSICAIE------RVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRI 272

Query: 294 KISQFRDIPYISPYSDFSGIKAGTPQK----EKHACGVVHEILNLTLEKRTLVDHLTHFR 353
            + +++ +PY SPY D SG    + +     EK +   +HE+L+LT+EK+  ++ + HFR
Sbjct: 273 AVWKWQRLPYWSPYEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFR 332

Query: 354 EEFRFSQQLRGMLIRHPDMFYVSLKGD---RDSVFLREAYRDSQLIDKDRLLIIKEKLRA 394
                 ++L+  L++H  +FY+S +G+     +VFLRE Y+  +L++ + + + + +L  
Sbjct: 333 NVMNLPKKLKEFLLQHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAE 382

[Close]

BLAST of IVF0003125 vs. ExPASy Swiss-Prot
Match: Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 9.4e-23
Identity = 102/370 (27.57%), Postives = 174/370 (47.03%), Query Frame = 0


Query: 62  VKRRKELPFDNV--IQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLI 121
           +K +++  FDN+  I R  +LK V+ ++  +VQ+P+R + +  + K  R   +  K  + 
Sbjct: 29  MKWKRDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKTRQFDVSTK--IA 88

Query: 122 ALLKKFPAVFEVVEEGAFSLK-FKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSAD 181
             L+KFP++FE      ++L  F+LT EA  L  +E  +       L  +L+KL++MS D
Sbjct: 89  HFLRKFPSIFEEFVGPEYNLPWFRLTPEATELDRQERVVYQTSADDLRDRLKKLILMSKD 148

Query: 182 KRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATE---RGPALELTHWDPELAVSA 241
             + L  +  ++   GLP ++           FR V  E   +G A++    D  L+V  
Sbjct: 149 NVLPLSIVQGMKWYLGLPDDYLQFPDMNLDSSFRFVDMEDGVKGLAVDYNGGDKVLSVLQ 208

Query: 242 AELAEEENRARELEEKNLIIDRPLKFNRVKLP-KGLNLSKSEMRKISQFRDIPYISPYSD 301
               ++      LEE    I+ PL       P KG  L       + +F+ +PY+SPY D
Sbjct: 209 KNAMKKRRGEVSLEE----IEFPL------FPSKGCRLRVKIEDWLMEFQKLPYVSPYDD 268

Query: 302 FSGIKAGTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMF 361
           +S +   +   EK   G +HE+L L +E       L   ++ F   Q++     RHP +F
Sbjct: 269 YSCLDPSSDIAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAFERHPQIF 328

Query: 362 YVSLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPR--FRSRGASNGDTKGGD 421
           Y+S+K    +  LRE YRD   ++   +L +++K   L+       +SR  S G    G 
Sbjct: 329 YLSMKNKTCTAILREPYRDKASVETHPVLGVRKKYIQLMKNSELILKSRRNSFGFRDEGV 386

Query: 422 TNQPSDMSGE 423
            ++  D+  E
Sbjct: 389 VDKDLDLDFE 386

[Close]

BLAST of IVF0003125 vs. ExPASy TrEMBL
Match: A0A5D3BY23 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold675G00850 PE=4 SV=1)

HSP 1 Score: 979.5 bits (2531), Expect = 5.1e-282
Identity = 511/511 (100.00%), Postives = 511/511 (100.00%), Query Frame = 0


Query: 1   MDSKLLLYSPKASLSISVPFILGHKSYYSVKSQFWGKNLDLRNRNDNLRKAHDPFQPIRA 60
           MDSKLLLYSPKASLSISVPFILGHKSYYSVKSQFWGKNLDLRNRNDNLRKAHDPFQPIRA
Sbjct: 1   MDSKLLLYSPKASLSISVPFILGHKSYYSVKSQFWGKNLDLRNRNDNLRKAHDPFQPIRA 60

Query: 61  VVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIA 120
           VVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIA
Sbjct: 61  VVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIA 120

Query: 121 LLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKR 180
           LLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKR
Sbjct: 121 LLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKR 180

Query: 181 ILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAE 240
           ILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAE
Sbjct: 181 ILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAE 240

Query: 241 EENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGIKA 300
           EENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGIKA
Sbjct: 241 EENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGIKA 300

Query: 301 GTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKG 360
           GTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKG
Sbjct: 301 GTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKG 360

Query: 361 DRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTKGGDTNQPSDMS 420
           DRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTKGGDTNQPSDMS
Sbjct: 361 DRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTKGGDTNQPSDMS 420

Query: 421 GEEWSDVDNLLDDDEFDDDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFNGDQDGESINIG 480
           GEEWSDVDNLLDDDEFDDDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFNGDQDGESINIG
Sbjct: 421 GEEWSDVDNLLDDDEFDDDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFNGDQDGESINIG 480

Query: 481 SRKQKQVNDLQKVGQSRLSPVLPDGRPRERW 512
           SRKQKQVNDLQKVGQSRLSPVLPDGRPRERW
Sbjct: 481 SRKQKQVNDLQKVGQSRLSPVLPDGRPRERW 511

[Close]

BLAST of IVF0003125 vs. ExPASy TrEMBL
Match: A0A1S3CG79 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103500096 PE=4 SV=1)

HSP 1 Score: 968.8 bits (2503), Expect = 9.1e-279
Identity = 508/511 (99.41%), Postives = 508/511 (99.41%), Query Frame = 0


Query: 1   MDSKLLLYSPKASLSISVPFILGHKSYYSVKSQFWGKNLDLRNRNDNLRKAHDPFQPIRA 60
           MDSKLLLYSPKASLSISVPFILGHKSYYSVKSQFWGKNLDLRNRNDNLRKAHDPFQPIRA
Sbjct: 1   MDSKLLLYSPKASLSISVPFILGHKSYYSVKSQFWGKNLDLRNRNDNLRKAHDPFQPIRA 60

Query: 61  VVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIA 120
           VVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIA
Sbjct: 61  VVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIA 120

Query: 121 LLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKR 180
           LLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKR
Sbjct: 121 LLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKR 180

Query: 181 ILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAE 240
           ILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAE
Sbjct: 181 ILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAE 240

Query: 241 EENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGIKA 300
           EENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGIKA
Sbjct: 241 EENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGIKA 300

Query: 301 GTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKG 360
           GTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKG
Sbjct: 301 GTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKG 360

Query: 361 DRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTKGGDTNQPSDMS 420
           DRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTKGGDTNQPSDMS
Sbjct: 361 DRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTKGGDTNQPSDMS 420

Query: 421 GEEWSDVDNLLDDDEFDDDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFNGDQDGESINIG 480
           GEEWSDVDNLLDD   DDDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFNGDQDGESINIG
Sbjct: 421 GEEWSDVDNLLDD---DDDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFNGDQDGESINIG 480

Query: 481 SRKQKQVNDLQKVGQSRLSPVLPDGRPRERW 512
           SRKQKQVNDLQKVGQSRLSPVLPDGRPRERW
Sbjct: 481 SRKQKQVNDLQKVGQSRLSPVLPDGRPRERW 508

[Close]

BLAST of IVF0003125 vs. ExPASy TrEMBL
Match: A0A6J1DTV5 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Momordica charantia OX=3673 GN=LOC111023444 PE=4 SV=1)

HSP 1 Score: 830.5 bits (2144), Expect = 3.9e-237
Identity = 446/522 (85.44%), Postives = 473/522 (90.61%), Query Frame = 0


Query: 1   MDSKLLLYSPKASLSISVPFILGHKSY------YSVKS-QFWGKNLDLRNRND----NLR 60
           MDSKLLLYSPKASLS+SVPFIL  K Y      +S+KS +FWG+NLDLR+R D    NLR
Sbjct: 1   MDSKLLLYSPKASLSVSVPFILPRKPYFSENPSFSLKSEEFWGRNLDLRHRIDSSSSNLR 60

Query: 61  KAHDPFQPIRAVVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRD 120
           K H P QPIRAVVKRRKEL FDNVIQRDKKLKLVMRIRKILVQ+PDR+MSLKELGKFRRD
Sbjct: 61  KFHVPLQPIRAVVKRRKELKFDNVIQRDKKLKLVMRIRKILVQRPDRIMSLKELGKFRRD 120

Query: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKL 180
           LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLT EAERLYLEELKIRNEMEGLLV+KL
Sbjct: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTPEAERLYLEELKIRNEMEGLLVVKL 180

Query: 181 RKLLMMSADKRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDP 240
           RKLLMMS DKRILLEKIAHLRTDFGLPLEFRDTICHRYP YFRVVAT RGPALELTHWDP
Sbjct: 181 RKLLMMSIDKRILLEKIAHLRTDFGLPLEFRDTICHRYPHYFRVVATGRGPALELTHWDP 240

Query: 241 ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYI 300
           ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSK EMRKISQFRDIPY+
Sbjct: 241 ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKGEMRKISQFRDIPYV 300

Query: 301 SPYSDFSGIKAGTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360
           SPYSDFS +KAGTPQKEKHACGVVHEIL+LTLEKRTLVDHLTHFREEFRFSQQLRGMLIR
Sbjct: 301 SPYSDFSELKAGTPQKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360

Query: 361 HPDMFYVSLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTK 420
           HPDMFY+SLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFR RGA+  DT 
Sbjct: 361 HPDMFYISLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRGRGATKSDTD 420

Query: 421 GGDTNQPSDMSGEEWSDVDNLLDDDEFDDDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFN 480
           G +TNQP D+SGE+WSDVDNLL DD       DDDE  DD ++ ++D WSDEDDTPPSF+
Sbjct: 421 GEETNQPDDLSGEDWSDVDNLLGDD-------DDDE--DDGDDTYDDGWSDEDDTPPSFD 480

Query: 481 GDQDGESINIGSRKQKQVNDLQKVGQSRLSPVLPDGRPRERW 512
           GD DGE+INI S KQK+V++LQKVGQS L+PVLPDGR RERW
Sbjct: 481 GDGDGEAINIVSSKQKRVDNLQKVGQSLLTPVLPDGRSRERW 513

[Close]

BLAST of IVF0003125 vs. ExPASy TrEMBL
Match: A0A6J1H780 (protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111461117 PE=4 SV=1)

HSP 1 Score: 820.1 bits (2117), Expect = 5.2e-234
Identity = 440/523 (84.13%), Postives = 473/523 (90.44%), Query Frame = 0


Query: 1   MDSKLLLYSPKASLSISVPFILGHKSYY------SVKSQFWGKNLDLRNRND-----NLR 60
           MDS +L YSPKASLS+S+PF+L H+ Y+      SVKS+FWGKNLDLR+RND     +LR
Sbjct: 1   MDSMVLFYSPKASLSMSIPFVLPHRGYFFENPSLSVKSEFWGKNLDLRHRNDGFSGSDLR 60

Query: 61  KAHDPFQPIRAVVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRD 120
           K+  PFQPIRA+VKRRKELPFDNVIQRDKKLKLVMRIRKILVQ PDRVMSLKELGKFRRD
Sbjct: 61  KSRVPFQPIRAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRD 120

Query: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKL 180
           LGLEKKRRLIALLKKFPAVFEVVEEGAFSLK KLTAEAERLYLEELKIRNEMEGLLV+KL
Sbjct: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAERLYLEELKIRNEMEGLLVMKL 180

Query: 181 RKLLMMSADKRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDP 240
           RKLLMMS DKRILLEKIAHLRTDFGLPLEFR+TICH YPQYFRVVAT RGPALELTHWDP
Sbjct: 181 RKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTHWDP 240

Query: 241 ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYI 300
           ELAVSA+ELAEEENRA ELEEKNLIIDRPLKFNRV+LPKGLN+SKSEMR+I QFRDIPYI
Sbjct: 241 ELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYI 300

Query: 301 SPYSDFSGIKAGTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360
           SPYSDFSG+KAGTP+KEKHACGVVHEIL+LTLEKRTLVDHLTHFREEFRFSQQLRGMLIR
Sbjct: 301 SPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360

Query: 361 HPDMFYVSLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTK 420
           HPDMFYVSLKGDRDSVFLREAYR+SQLIDKDRLLIIKEKLRALVAVPR R RGA   DT 
Sbjct: 361 HPDMFYVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPRIRGRGALKNDTD 420

Query: 421 GGDTNQPSDMSGEEWSDVDNLLDDDEFDDDEFDDDEFDDDNNEAFEDDWSD-EDDTPPSF 480
           GGD +QP  MSG+E SD+DNLLD         DDDEFDD+ + AFED+WSD EDDTPPSF
Sbjct: 421 GGD-DQPDYMSGDESSDIDNLLD---------DDDEFDDNEDGAFEDNWSDEEDDTPPSF 480

Query: 481 NGDQDGESINIGSRKQKQVNDLQKVGQSRLSPVLPDGRPRERW 512
           NGD+DGESINI +RKQ+QV++ QK+ QS LSPVLPDGRPRERW
Sbjct: 481 NGDRDGESINIEARKQRQVDNSQKLDQSLLSPVLPDGRPRERW 513

[Close]

BLAST of IVF0003125 vs. ExPASy TrEMBL
Match: A0A6J1KW65 (protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111498122 PE=4 SV=1)

HSP 1 Score: 810.1 bits (2091), Expect = 5.4e-231
Identity = 437/523 (83.56%), Postives = 469/523 (89.67%), Query Frame = 0


Query: 1   MDSKLLLYSPKASLSISVPFILGHKSYY------SVKSQFWGKNLDLRNRND-----NLR 60
           MDS +L YSPKASLS+S+PF+L H++Y+      SVKS+FWGKNLDLR+RND     +LR
Sbjct: 1   MDSMVLFYSPKASLSMSIPFVLPHRAYFFENPSSSVKSEFWGKNLDLRHRNDGFSGSDLR 60

Query: 61  KAHDPFQPIRAVVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRD 120
           K+  PFQPI A+VKRRKELPFDNVIQRDKKLKLVMRIRKILVQ PDRVMSLKELGKFRRD
Sbjct: 61  KSRVPFQPITAIVKRRKELPFDNVIQRDKKLKLVMRIRKILVQHPDRVMSLKELGKFRRD 120

Query: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKL 180
           LGLEKKRRLIALLKKFPAVFEVVEEGAFSLK KLTAEAE LYLEELKIRNEMEGLLV+KL
Sbjct: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKVKLTAEAESLYLEELKIRNEMEGLLVMKL 180

Query: 181 RKLLMMSADKRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDP 240
           RKLLMMS DKRILLEKIAHLRTDFGLPLEFR+TICH YPQYFRVVAT RGPALELTHWDP
Sbjct: 181 RKLLMMSVDKRILLEKIAHLRTDFGLPLEFRETICHGYPQYFRVVATGRGPALELTHWDP 240

Query: 241 ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYI 300
           ELAVSA+ELAEEENRA ELEEKNLIIDRPLKFNRV+LPKGLN+SKSEMR+I QFRDIPYI
Sbjct: 241 ELAVSASELAEEENRAIELEEKNLIIDRPLKFNRVRLPKGLNVSKSEMRRICQFRDIPYI 300

Query: 301 SPYSDFSGIKAGTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360
           SPYSDFSG+KAGTP+KEKHACGVVHEIL+LTLEKRTLVDHLTHFREEFRFSQQLRGMLIR
Sbjct: 301 SPYSDFSGLKAGTPEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360

Query: 361 HPDMFYVSLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTK 420
           HPDMFYVSLKGDRDSVFLREAYR+SQLIDKDRLLIIKEKLRALVAVPR R RGA   DT 
Sbjct: 361 HPDMFYVSLKGDRDSVFLREAYRNSQLIDKDRLLIIKEKLRALVAVPRIRGRGALKNDTD 420

Query: 421 GGDTNQPSDMSGEEWSDVDNLLDDDEFDDDEFDDDEFDDDNNEAFEDDWSD-EDDTPPSF 480
           GGD +QP  MSGEE SD+DNLLD         D DEFDD+ + AFED+WSD EDDTPPSF
Sbjct: 421 GGD-DQPDYMSGEESSDIDNLLD---------DGDEFDDNEDGAFEDNWSDEEDDTPPSF 480

Query: 481 NGDQDGESINIGSRKQKQVNDLQKVGQSRLSPVLPDGRPRERW 512
           N D+DGESINI +RKQ QV++ QK+ QS LSPVLPDGRPRERW
Sbjct: 481 NVDRDGESINIEARKQSQVDNSQKLDQSLLSPVLPDGRPRERW 513

[Close]

BLAST of IVF0003125 vs. NCBI nr
Match: KAA0051010.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa] >TYK04397.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa])

HSP 1 Score: 982 bits (2539), Expect = 0.0
Identity = 511/511 (100.00%), Postives = 511/511 (100.00%), Query Frame = 0


Query: 1   MDSKLLLYSPKASLSISVPFILGHKSYYSVKSQFWGKNLDLRNRNDNLRKAHDPFQPIRA 60
           MDSKLLLYSPKASLSISVPFILGHKSYYSVKSQFWGKNLDLRNRNDNLRKAHDPFQPIRA
Sbjct: 1   MDSKLLLYSPKASLSISVPFILGHKSYYSVKSQFWGKNLDLRNRNDNLRKAHDPFQPIRA 60

Query: 61  VVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIA 120
           VVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIA
Sbjct: 61  VVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIA 120

Query: 121 LLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKR 180
           LLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKR
Sbjct: 121 LLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKR 180

Query: 181 ILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAE 240
           ILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAE
Sbjct: 181 ILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAE 240

Query: 241 EENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGIKA 300
           EENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGIKA
Sbjct: 241 EENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGIKA 300

Query: 301 GTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKG 360
           GTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKG
Sbjct: 301 GTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKG 360

Query: 361 DRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTKGGDTNQPSDMS 420
           DRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTKGGDTNQPSDMS
Sbjct: 361 DRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTKGGDTNQPSDMS 420

Query: 421 GEEWSDVDNLLDDDEFDDDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFNGDQDGESINIG 480
           GEEWSDVDNLLDDDEFDDDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFNGDQDGESINIG
Sbjct: 421 GEEWSDVDNLLDDDEFDDDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFNGDQDGESINIG 480

Query: 481 SRKQKQVNDLQKVGQSRLSPVLPDGRPRERW 511
           SRKQKQVNDLQKVGQSRLSPVLPDGRPRERW
Sbjct: 481 SRKQKQVNDLQKVGQSRLSPVLPDGRPRERW 511

[Close]

BLAST of IVF0003125 vs. NCBI nr
Match: XP_008461525.1 (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo])

HSP 1 Score: 972 bits (2512), Expect = 0.0
Identity = 508/511 (99.41%), Postives = 508/511 (99.41%), Query Frame = 0


Query: 1   MDSKLLLYSPKASLSISVPFILGHKSYYSVKSQFWGKNLDLRNRNDNLRKAHDPFQPIRA 60
           MDSKLLLYSPKASLSISVPFILGHKSYYSVKSQFWGKNLDLRNRNDNLRKAHDPFQPIRA
Sbjct: 1   MDSKLLLYSPKASLSISVPFILGHKSYYSVKSQFWGKNLDLRNRNDNLRKAHDPFQPIRA 60

Query: 61  VVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIA 120
           VVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIA
Sbjct: 61  VVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIA 120

Query: 121 LLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKR 180
           LLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKR
Sbjct: 121 LLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKR 180

Query: 181 ILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAE 240
           ILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAE
Sbjct: 181 ILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAE 240

Query: 241 EENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGIKA 300
           EENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGIKA
Sbjct: 241 EENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGIKA 300

Query: 301 GTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKG 360
           GTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKG
Sbjct: 301 GTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKG 360

Query: 361 DRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTKGGDTNQPSDMS 420
           DRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTKGGDTNQPSDMS
Sbjct: 361 DRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTKGGDTNQPSDMS 420

Query: 421 GEEWSDVDNLLDDDEFDDDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFNGDQDGESINIG 480
           GEEWSDVDNLLDDD   DDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFNGDQDGESINIG
Sbjct: 421 GEEWSDVDNLLDDD---DDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFNGDQDGESINIG 480

Query: 481 SRKQKQVNDLQKVGQSRLSPVLPDGRPRERW 511
           SRKQKQVNDLQKVGQSRLSPVLPDGRPRERW
Sbjct: 481 SRKQKQVNDLQKVGQSRLSPVLPDGRPRERW 508

[Close]

BLAST of IVF0003125 vs. NCBI nr
Match: XP_004139734.1 (protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Cucumis sativus] >KGN44834.2 hypothetical protein Csa_016619 [Cucumis sativus])

HSP 1 Score: 911 bits (2354), Expect = 0.0
Identity = 473/511 (92.56%), Postives = 492/511 (96.28%), Query Frame = 0


Query: 1   MDSKLLLYSPKASLSISVPFILGHKSYYSVKSQFWGKNLDLRNRNDNLRKAHDPFQPIRA 60
           MDSKLLLYSPKASLSISVPFILGHKSYYSVKSQFWGKNLDLRNRNDNLRK+H PFQPIRA
Sbjct: 1   MDSKLLLYSPKASLSISVPFILGHKSYYSVKSQFWGKNLDLRNRNDNLRKSHVPFQPIRA 60

Query: 61  VVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIA 120
           VVKRRKELPFDNVIQ+DKKLKL +RIRKILVQQPDRVMSLK+LG+FR+DLGLE+KRR+IA
Sbjct: 61  VVKRRKELPFDNVIQKDKKLKLALRIRKILVQQPDRVMSLKDLGRFRKDLGLERKRRIIA 120

Query: 121 LLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKR 180
           LLKKFPAVFEVVEEGAF+LKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKR
Sbjct: 121 LLKKFPAVFEVVEEGAFALKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKR 180

Query: 181 ILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAE 240
           ILLEKIAHLRTD GLPLEFRDTICHRYPQYFRVVAT+RGPALELTHWDPELAVSAAELAE
Sbjct: 181 ILLEKIAHLRTDLGLPLEFRDTICHRYPQYFRVVATKRGPALELTHWDPELAVSAAELAE 240

Query: 241 EENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGIKA 300
           EENRARELEEKNLIIDRPLKFNRVKLPKGLNLSK EMRKISQFRDIPYISPYSDFSG+KA
Sbjct: 241 EENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKGEMRKISQFRDIPYISPYSDFSGLKA 300

Query: 301 GTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKG 360
           GTP KEKHAC VVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKG
Sbjct: 301 GTPPKEKHACAVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKG 360

Query: 361 DRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTKGGDTNQPSDMS 420
           DRDSVFLREAYR SQLIDKDRLLIIKEKLR LV VPR R RGASN DTKGGDT+QP+DMS
Sbjct: 361 DRDSVFLREAYRGSQLIDKDRLLIIKEKLRVLVTVPRLRGRGASNSDTKGGDTDQPNDMS 420

Query: 421 GEEWSDVDNLLDDDEFDDDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFNGDQDGESINIG 480
           GEEWSDVD+LLDDD   DDEFDDDEFDDDNN AFEDDW+DEDDTPPSF+GD+DGESINIG
Sbjct: 421 GEEWSDVDDLLDDD---DDEFDDDEFDDDNNGAFEDDWNDEDDTPPSFDGDEDGESINIG 480

Query: 481 SRKQKQVNDLQKVGQSRLSPVLPDGRPRERW 511
           SRKQKQVNDLQKV QS LSPVLPDG+ RE+W
Sbjct: 481 SRKQKQVNDLQKVDQSPLSPVLPDGKHREKW 508

[Close]

BLAST of IVF0003125 vs. NCBI nr
Match: XP_038900012.1 (protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Benincasa hispida])

HSP 1 Score: 889 bits (2297), Expect = 0.0
Identity = 468/511 (91.59%), Postives = 481/511 (94.13%), Query Frame = 0


Query: 1   MDSKLLLYSPKASLSISVPFILGHKSYYSVKSQFWGKNLDLRNRNDNLRKAHDPFQPIRA 60
           M SKLLLY PK SLSISVPFILGHKSY SVKS+FWGKNL+ RNRND+LRK H PFQPIRA
Sbjct: 1   MGSKLLLYCPKPSLSISVPFILGHKSYCSVKSEFWGKNLEFRNRNDSLRKPHVPFQPIRA 60

Query: 61  VVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIA 120
           VVKRRKEL FDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIA
Sbjct: 61  VVKRRKELKFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIA 120

Query: 121 LLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKR 180
           LLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKR
Sbjct: 121 LLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADKR 180

Query: 181 ILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAE 240
           ILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAE
Sbjct: 181 ILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELAE 240

Query: 241 EENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGIKA 300
           EENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGIKA
Sbjct: 241 EENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGIKA 300

Query: 301 GTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKG 360
           GTPQKEKHACGVVHEIL+LTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKG
Sbjct: 301 GTPQKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVSLKG 360

Query: 361 DRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTKGGDTNQPSDMS 420
           DRDSVFLREAYRDSQLIDKDRLLIIKEKLR+LVAVPRF+ RGA   D  G DT+QP DMS
Sbjct: 361 DRDSVFLREAYRDSQLIDKDRLLIIKEKLRSLVAVPRFQGRGAPKSDMDGEDTDQPDDMS 420

Query: 421 GEEWSDVDNLLDDDEFDDDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFNGDQDGESINIG 480
           GEEWSDVDN+ DDD        DDEFDD ++ AFEDDW DEDDTPPSF+GD+DGESIN G
Sbjct: 421 GEEWSDVDNVWDDD--------DDEFDDGDDGAFEDDWIDEDDTPPSFDGDRDGESINSG 480

Query: 481 SRKQKQVNDLQKVGQSRLSPVLPDGRPRERW 511
           SRKQKQVN+LQKVGQS LSPVLPDGRPRERW
Sbjct: 481 SRKQKQVNNLQKVGQSLLSPVLPDGRPRERW 503

[Close]

BLAST of IVF0003125 vs. NCBI nr
Match: XP_022156569.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Momordica charantia])

HSP 1 Score: 833 bits (2153), Expect = 1.35e-301
Identity = 444/522 (85.06%), Postives = 472/522 (90.42%), Query Frame = 0


Query: 1   MDSKLLLYSPKASLSISVPFILGHKSYYS------VKSQ-FWGKNLDLRNRND----NLR 60
           MDSKLLLYSPKASLS+SVPFIL  K Y+S      +KS+ FWG+NLDLR+R D    NLR
Sbjct: 1   MDSKLLLYSPKASLSVSVPFILPRKPYFSENPSFSLKSEEFWGRNLDLRHRIDSSSSNLR 60

Query: 61  KAHDPFQPIRAVVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRD 120
           K H P QPIRAVVKRRKEL FDNVIQRDKKLKLVMRIRKILVQ+PDR+MSLKELGKFRRD
Sbjct: 61  KFHVPLQPIRAVVKRRKELKFDNVIQRDKKLKLVMRIRKILVQRPDRIMSLKELGKFRRD 120

Query: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKL 180
           LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLT EAERLYLEELKIRNEMEGLLV+KL
Sbjct: 121 LGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTPEAERLYLEELKIRNEMEGLLVVKL 180

Query: 181 RKLLMMSADKRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDP 240
           RKLLMMS DKRILLEKIAHLRTDFGLPLEFRDTICHRYP YFRVVAT RGPALELTHWDP
Sbjct: 181 RKLLMMSIDKRILLEKIAHLRTDFGLPLEFRDTICHRYPHYFRVVATGRGPALELTHWDP 240

Query: 241 ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYI 300
           ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSK EMRKISQFRDIPY+
Sbjct: 241 ELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKGEMRKISQFRDIPYV 300

Query: 301 SPYSDFSGIKAGTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360
           SPYSDFS +KAGTPQKEKHACGVVHEIL+LTLEKRTLVDHLTHFREEFRFSQQLRGMLIR
Sbjct: 301 SPYSDFSELKAGTPQKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 360

Query: 361 HPDMFYVSLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTK 420
           HPDMFY+SLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFR RGA+  DT 
Sbjct: 361 HPDMFYISLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRGRGATKSDTD 420

Query: 421 GGDTNQPSDMSGEEWSDVDNLLDDDEFDDDEFDDDEFDDDNNEAFEDDWSDEDDTPPSFN 480
           G +TNQP D+SGE+WSDVDNLL DD+ D+D+ DD          ++D WSDEDDTPPSF+
Sbjct: 421 GEETNQPDDLSGEDWSDVDNLLGDDDDDEDDGDD---------TYDDGWSDEDDTPPSFD 480

Query: 481 GDQDGESINIGSRKQKQVNDLQKVGQSRLSPVLPDGRPRERW 511
           GD DGE+INI S KQK+V++LQKVGQS L+PVLPDGR RERW
Sbjct: 481 GDGDGEAINIVSSKQKRVDNLQKVGQSLLTPVLPDGRSRERW 513

[Close]

BLAST of IVF0003125 vs. TAIR 10
Match: AT4G01037.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 592.4 bits (1526), Expect = 3.4e-169
Identity = 332/540 (61.48%), Postives = 407/540 (75.37%), Query Frame = 0


Query: 1   MDSKLLLYSPKASLSISVPFILGHKSYYSVK------------SQFWGKNLDLRNRN--- 60
           M+ KLLL + K  L +S       K+  SVK            SQF G+ L L N+    
Sbjct: 1   MEPKLLLSAHK-PLFVSCNSPFNEKTKLSVKSGLPMSTIRAARSQFMGEGLILGNKYGFW 60

Query: 61  DNLRKAHDPFQPIRAVVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGK 120
              RK     +P+RA VKRRKEL FD+V+QRDKKLKLV+ IRKILV QPDR+MSL+ LGK
Sbjct: 61  STSRKTRVVVEPVRAAVKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGK 120

Query: 121 FRRDLGLEKKRRLIALLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLL 180
           +RRDLGL+K+RR IALL+K+P VFE+VEEGA+SL+FK+T+EAERLYL+E++IRNE+E +L
Sbjct: 121 YRRDLGLKKRRRFIALLRKYPGVFEIVEEGAYSLRFKMTSEAERLYLDEMRIRNELEDVL 180

Query: 181 VIKLRKLLMMSADKRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELT 240
           V+KLRKL+MMS DKRILLEKI+HL+TD GLPLEFRDTIC RYPQYFRVV T RGPALELT
Sbjct: 181 VVKLRKLVMMSIDKRILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTPRGPALELT 240

Query: 241 HWDPELAVSAAELAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRD 300
           HWDPELAVSAAEL+E++NR RE EE+NLIIDRP KFNRVKLP+GLNLSKSE RKISQFRD
Sbjct: 241 HWDPELAVSAAELSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRD 300

Query: 301 IPYISPYSDFSGIKAGTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRG 360
           + YISPY DFS +++GT +KEKHACGV+HE+L+LT EKRTLVDHLTHFREEFRFSQQLRG
Sbjct: 301 MQYISPYKDFSHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRG 360

Query: 361 MLIRHPDMFYVSLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASN 420
           MLIRHPD+FYVSLKG+RDSVFLREAYR+S+LIDKD L ++KEK+RALV+VPRF  RG   
Sbjct: 361 MLIRHPDLFYVSLKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPRFPRRGGPR 420

Query: 421 GDTKGGDT----------NQPSDMSGEEWSDVDNLLDDDEFDDDEFDDDEFDDDNNEAFE 480
            D +G +            +  +   EEWSDVD  L+ ++  +D  DD ++ DD      
Sbjct: 421 KDEEGREVEIDGSDADGEEEEEESDAEEWSDVDGYLEGEDGGND--DDGDWTDDEG---- 480

Query: 481 DDWSDEDDTPPSFNGDQDGE---SINIG-SRKQKQVNDLQKVGQSRLSPVLPDGRPRERW 512
                E+D PP+F+ D + E   S+ IG S   ++ +  +K  +  L+PV PDG PRE+W
Sbjct: 481 -----EEDVPPNFDDDDEDEEEDSVKIGLSPSSRKSSSPRKKEEKVLTPVFPDGTPREKW 528

[Close]

BLAST of IVF0003125 vs. TAIR 10
Match: AT5G62990.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 226.1 bits (575), Expect = 6.4e-59
Identity = 160/431 (37.12%), Postives = 243/431 (56.38%), Query Frame = 0


Query: 71  DNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIALLKKFPAVFE 130
           D  + +  +++ V ++  +L+ +P   + ++ L K R  L +E    ++++++++P +FE
Sbjct: 66  DRHVVKQNRVRFVQKLNTLLLSKPKHYIPIEILYKCRSYLCIENPLAILSMIRRYPTIFE 125

Query: 131 V-----------VEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSADK 190
           +             +    L  +LT+ A  L ++EL +++E+   L  KL+KLLM+S+ +
Sbjct: 126 LFTTPTPHLPMNATKPLSQLCVRLTSAASSLAMQELNLKSEISDKLATKLQKLLMLSSHR 185

Query: 191 RILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPALELTHWDPELAVSAAELA 250
           R+LL K+ H+  DFG P  FR  +C+ YP  F+ V T  G ALEL   DPELA       
Sbjct: 186 RLLLSKLVHIAPDFGFPPNFRSRLCNDYPDKFKTVDTSYGRALELVSSDPELA------- 245

Query: 251 EEENRARELE-EKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSGI 310
              N+    E ++ LI+DRPLKF R+ L +GLNL +     + +FR+ P + PY   S  
Sbjct: 246 ---NQMPSPEVDRGLIVDRPLKFKRLNLRRGLNLKRRHQGFLIKFRESPDVCPYKMSSDY 305

Query: 311 KAG-TPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVS 370
            A  + + EK AC VV E+L LT+EKRTL+DHLTHFR+EF    +LR +++RHP++FYVS
Sbjct: 306 LASESIEAEKRACAVVREVLGLTVEKRTLIDHLTHFRKEFSLPNKLRDLIVRHPELFYVS 365

Query: 371 LKGDRDSVFLREAYRDS-QLIDKDRLLIIKEKLRALVAV-PRFRSRGASNGDTKGGDTNQ 430
           +KG RDSVFL EAY D+  L+DKD  L+I+E+L  L+    R R      G T G     
Sbjct: 366 IKGMRDSVFLVEAYNDNGDLLDKDERLVIRERLIDLIQEGKRIRRERRRKGATLG----- 425

Query: 431 PSDMSGEEWSDVDNLLDDDEFD-DDEFDD--DEFDDDNNEAFEDDWSDEDDTPPSFNGDQ 484
             D S EE    D  +DD + D DDE++D  +   D  +   E  + +EDD         
Sbjct: 426 --DKSVEEKRKDDETIDDYDSDLDDEYEDGFENLFDSEDLGVEYHFDEEDDDD---EAGV 476

[Close]

BLAST of IVF0003125 vs. TAIR 10
Match: AT3G63090.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 183.7 bits (465), Expect = 3.6e-46
Identity = 127/336 (37.80%), Postives = 189/336 (56.25%), Query Frame = 0


Query: 65  RKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRLIALLKK 124
           +K+   D  I++DK+ KL  R+ K ++ +P +V+ L+ L K R  L L  K +  + ++ 
Sbjct: 39  KKDTRLDEAIEQDKRYKLCARVVKEVLNEPGQVIPLRYLEKRRERLRLTFKAK--SFVEM 98

Query: 125 FPAVFEV----VEEGAFSLKFKLTAEAERLYL-EELKIRNEMEGLLVIKLRKLLMMSADK 184
            P++FE+    ++  +  ++F       R +L EE +I +E E LLV KL +LLMM+ DK
Sbjct: 99  NPSLFEIYYDRIKPKSDPVQFLRPTPRLRAFLDEEQRIYSENEPLLVSKLCQLLMMAKDK 158

Query: 185 RILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVA-TERGPA-LELTHWDPELAVSAAE 244
            I  +K+ H++ DFG P +F   +  +YP YFR+    E G + LEL  W+P+ A S  E
Sbjct: 159 VISADKLVHVKRDFGFPNDFLMKLVQKYPNYFRLTGLPEEGKSFLELVSWNPDFAKSKIE 218

Query: 245 LAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSDFSG 304
           L     RA +   K  +  RP  +N VKLP G  L K        + +  YISPY D S 
Sbjct: 219 L-----RAEDETLKTGVRIRP-NYN-VKLPSGFFLRKEMREWTRDWLEQDYISPYEDVSH 278

Query: 305 IKAGTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMFYVS 364
           +   + + EK   GVVHE+L+L+L KR  V  L  F +EFRFS     +  RH  +FY+S
Sbjct: 279 LDQASKEMEKRTVGVVHELLSLSLLKRVPVPTLGKFCDEFRFSNAFSSVFTRHSGIFYLS 338

Query: 365 LKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALV 394
           LKG   +  LREAY+D +L+D+D LL IK+K   L+
Sbjct: 339 LKGGIKTAVLREAYKDDELVDRDPLLAIKDKFLRLL 365

[Close]

BLAST of IVF0003125 vs. TAIR 10
Match: AT4G08940.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 176.8 bits (447), Expect = 4.5e-44
Identity = 118/336 (35.12%), Postives = 183/336 (54.46%), Query Frame = 0


Query: 59  RAVVKRRKELP-FDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRR 118
           +++     +LP  ++++ RD   + ++R ++ + +QP+R++ L + GK  R+LG  + R+
Sbjct: 59  KSIQHESTKLPHLESLVSRDAHFRFLIRSKEFISKQPERILRLDDAGKLYRELGFPRGRK 118

Query: 119 LIALLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSA 178
           +   + K P +F+        +    T   E L  EE  +   ME   V  +RKLLMM+ 
Sbjct: 119 VTKFIPKHPLIFQTYRHSDGKIWLGFTEFMEDLLDEEKGLMESMELDRVNCVRKLLMMTK 178

Query: 179 DKRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERG-PALELTHWDPELAVSAA 238
           DKRILL KI H R  FG+P +FRD +  +YP YFRVV    G   LEL +WD  LAVS  
Sbjct: 179 DKRILLSKIHHTRLLFGIPEDFRDRVA-KYPDYFRVVTGGDGNRVLELVNWDTNLAVSEL 238

Query: 239 E--LAEEENRARELEEKNLIIDRPLKFNRVKLPKGLNLSKSEMRKISQFRDIPYISPYSD 298
           E     +E++A+          R  KF  VK  K L L + + RK++     P +SPYSD
Sbjct: 239 ERLFMIDEDKAK----------RVFKF-PVKHGKELELEEKDTRKLNLLNTFPLVSPYSD 298

Query: 299 FSGIKAGTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDMF 358
              +   + + EK+  G+VHE LNLTLEKR  + H+  F++EF  ++Q   ML +    F
Sbjct: 299 GWKLDVWSLEAEKYRVGIVHEFLNLTLEKRASIHHIVEFKDEFSLTRQTYQMLKKQSMSF 358

Query: 359 YVSLKGDRDSVFLREAY-RDSQLIDKDRLLIIKEKL 390
           Y++      +VFL++AY  +  L+ KD  ++  EKL
Sbjct: 359 YLAGTEMNWTVFLKDAYDENGVLVSKDPQVVFNEKL 382

[Close]

BLAST of IVF0003125 vs. TAIR 10
Match: AT5G21970.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 166.8 bits (421), Expect = 4.6e-41
Identity = 136/410 (33.17%), Postives = 213/410 (51.95%), Query Frame = 0


Query: 59  RAVVKRRKELPFDNVIQRDKKLKLVMRIRKILVQQPDRVMSLKELGKFRRDLGLEKKRRL 118
           R+  KR +EL  +   ++ K    V+ + ++L  + D +M+++   ++RR + L K  ++
Sbjct: 52  RSREKRVQEL--EIATEKWKIASKVIFLMEVLKGERDMIMTVRSFEQYRRQINLPKPHKI 111

Query: 119 IALLKKFPAVFEVVEEGAFSLKFKLTAEAERLYLEELKIRNEMEGLLVIKLRKLLMMSAD 178
              ++K P +FE+ ++    L   LT   E L  E  K+  E        + + LMMS D
Sbjct: 112 SDFIRKSPKLFELYKDQRGVLWCGLTEGGEDLLDEHDKLLEENGDKAAEHVTRCLMMSVD 171

Query: 179 KRILLEKIAHLRTDFGLPLEFRDTICHRYPQYFRVVATERGPA-LELTHWDPELAVSAAE 238
           K++ L+KI H R DFGLPL+FR    + +PQ+F+VV    G   LEL  W+P  A++   
Sbjct: 172 KKLPLDKIVHFRRDFGLPLDFRINWVYNFPQHFKVVKLGDGEEYLELVSWNPAWAIT--- 231

Query: 239 LAEEENRARELEEKNLIIDRPLKFN--------RVKLPKGLNLSKSEMRKISQFRDIPYI 298
                    ELE+K L I    +           +K P           KI  F+   Y+
Sbjct: 232 ---------ELEKKTLGITEDCEHKPGMLSLAFPMKFPPSYKKMYRYRGKIEHFQKRSYL 291

Query: 299 SPYSDFSGIKAGTPQKEKHACGVVHEILNLTLEKRTLVDHLTHFREEFRFSQQLRGMLIR 358
           SPY+D  G++AG+ + +K A  V+HE+L+ TLEKR + DHLTHFR EF   Q+L  + ++
Sbjct: 292 SPYADARGLEAGSKEFDKRAIAVMHELLSFTLEKRLVTDHLTHFRREFVMPQKLMRIFLK 351

Query: 359 HPDMFYVSLKGDRDSVFLREAYRDSQLIDKDRLLIIKEKLRALVAVPRFRSRGASNGDTK 418
           H  +FYVS +G R SVFL E Y   +LI+K  L++ KEKL         +    +  DT 
Sbjct: 352 HCGIFYVSERGKRFSVFLTEGYEGPELIEKCPLILWKEKLLKFTGYRGRKRDIQTYSDTL 411

Query: 419 GGDTNQPSDM-SGEEWSDVDNLLDDDEFDDDEFDDDEFD-DDNNEAFEDD 458
             +  +  +  SG+E   V     D ++DD   DDDE D  + N+A+E++
Sbjct: 412 DMEERELLESGSGDEDLSV-GFEKDGDYDDVVTDDDEMDIGEVNDAYEEN 446

The following BLAST results are available for this feature:

BLAST of IVF0003125 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0MFS5	4.8e-168	61.48	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3...	[more]
Q65XL5	3.2e-156	62.31	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon...	[more]
B6TTV8	5.7e-153	60.50	Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=...	[more]
Q689D6	1.8e-37	31.22	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1...	[more]
Q9ZUZ6	9.4e-23	27.57	Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W...	[more]

BLAST of IVF0003125 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BY23	5.1e-282	100.00	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3CG79	9.1e-279	99.41	protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103500096 PE=4...	[more]
A0A6J1DTV5	3.9e-237	85.44	protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Momordica charantia OX=3673 GN=LOC1110234...	[more]
A0A6J1H780	5.2e-234	84.13	protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC1114611...	[more]
A0A6J1KW65	5.4e-231	83.56	protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111498122...	[more]

BLAST of IVF0003125 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0051010.1	0.0	100.00	protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa] >TYK04397.1 prote...	[more]
XP_008461525.1	0.0	99.41	PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo]	[more]
XP_004139734.1	0.0	92.56	protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Cucumis sativus] >KGN44834....	[more]
XP_038900012.1	0.0	91.59	protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Benincasa hispida]	[more]
XP_022156569.1	1.35e-301	85.06	protein ROOT PRIMORDIUM DEFECTIVE 1 [Momordica charantia]	[more]

BLAST of IVF0003125 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G01037.1	3.4e-169	61.48	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT5G62990.1	6.4e-59	37.12	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT3G63090.1	3.6e-46	37.80	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT4G08940.1	4.5e-44	35.12	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT5G21970.1	4.6e-41	33.17	Ubiquitin carboxyl-terminal hydrolase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 231..251
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 400..511
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 406..422
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 469..495
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 425..468
IPR021099	Plant organelle RNA recognition domain	PFAM	PF11955	PORR	coord: 66..394 e-value: 1.1E-107 score: 359.8
IPR040293	Protein WHAT'S THIS FACTOR 1-like	PANTHER	PTHR31476:SF4	PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC	coord: 42..451
IPR045040	PORR family	PANTHER	PTHR31476	PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC	coord: 42..451

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0003125.1	IVF0003125.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000373	Group II intron splicing
molecular_function	GO:0003723	RNA binding