IVF0003095 (gene) Melon (IVF77) v1

Overview


Name	IVF0003095
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	thylakoid lumenal 15.0 kDa protein 2, chloroplastic
Location	chr08: 8335238 .. 8336920 (-)
RNA-Seq Expression	IVF0003095
Synteny	IVF0003095

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTAAATCCCCTATCCATTAGATTATCCAGAATCATCTTCTCCCTCCACTCTCTCTTTCCGAAACACAAATTTCATCCGAAAACCAATGCCGCAAAGACAGCAACAACAATCTGGAGGAATTCAATAATGGCGTTCATGCATCTTCATCATCACCTCCCTTCTCCATCTCTCTCATTTTCCAGATCTTCACTGCCGCTTTGCAGATCATCATCTCGTTTCTCTCCGCCGTCATCTCCATTTCCCTCCCAAAAATACACTGATTTCGGCGACCGCCTTCTTCATCTCCCCCAAAAATCTCTGAGTTTCGTGCTCTCTGGGGCTCTAGCGCTCGGCATAACCCTCTCCGGTAGTCATTCTTGCCTATTATCATCACGTTGATGAGAAAACAATGCTCAATTCGGTTTATGCTGATTCGAGTTTGAATTTTTAGGTTGTTATAAATTTGGATGTTGATACTCGTACTCTACCTTACTATAAAATTTTCATAATTTAATGAAATGCTAACAGTAATTCAGTGAGTAGGAGTTGGATTTGCTGATGCTAAAGTTGGGGTTAACAAACCGGAATTGCTTCCCAAGGAGTTCACCTCTGTCATTGATGTTGCTGGGTTTTTATCTGATGGCCAGGTATGGTTGGTTTGGCTTCATTATCTGATATAATTTTGGGTGTTTGATTCATGATCAAGTGGCCACTGCTGATTCTGATTTTCTGTGAAACAGGAAATTAGACTCAAACAAGAAATTGCTGACATTGAGAAGGATACTGGATATAAATTGCGAGTTTTGGCCCAAAATTATCCTGCGACTCCAGGTTTGTTCCATGTTTTATTGTCTTTGTCTGTCAGCAATTTCTTGTATAAAGGAGGATTAGATCACATTTCTCTCGTCTTTAATTCAGAGTTAAATGCACTCATAATATTCTTTTTATCTATGCATTAGAATTCTCTTTTGCGTGGTCTTACTAGAACGTTGAACGTCTAAGATTAGTTTATTTGGATAGAAACCACTAATCTAATCATCAGAAACAATCAATTTCATGATTTTTTTTTCAGGGCTGGCAGTAAAAGATTTTTGGCAAGTGGATGATAGGACAATCGTGTTTGTTGCTGATCCTACATTTGGTATGAACAGTGTTAGTATACTTTTCTCCTCCTATGCCTATGATGACATTGATTGATATCTTCATTCAGGTAACATATTGAACTTCAATGTTGGAGCGACGGTCGATTTAGACATTCCAAGGAGCTTTTGGAGCCGTTTGGCTGGAAAGTATGGAAACATTTTTTATTGGAAAGAGAAGGTAACATCTCCAATTGATACTTCTGTATAACAGTTACTGTTGTGAGCTTTTGCTTTGGTCACTGGTCAGGAAAATATGGTCACGATCATCATCTCATATGATCGCTCTGGTGACTTAAACAGGGTGAAGATTCGTCTATTGAATCAGCTGTTATGGCAATATCTAGTTGCTTGAGAGAACCCGTCGGCCCAAATAACTGTTCCGAGATAAAGTAAGAGCTTACAGCATCAAAGAATTCTGTTGTGTATTTTTAAACTTTATTTGTATGTTTTGACAGTGATACATGATATATAGTCTTCTCTTGCTACAACCTGCATAACTTAATTGTTTGTTTTTCTGATTCAAGAACTTAGCGTATGTCTATTACTTGAAAAAAATGGCAG

mRNA sequence

CCTAAATCCCCTATCCATTAGATTATCCAGAATCATCTTCTCCCTCCACTCTCTCTTTCCGAAACACAAATTTCATCCGAAAACCAATGCCGCAAAGACAGCAACAACAATCTGGAGGAATTCAATAATGGCGTTCATGCATCTTCATCATCACCTCCCTTCTCCATCTCTCTCATTTTCCAGATCTTCACTGCCGCTTTGCAGATCATCATCTCGTTTCTCTCCGCCGTCATCTCCATTTCCCTCCCAAAAATACACTGATTTCGGCGACCGCCTTCTTCATCTCCCCCAAAAATCTCTGAGTTTCGTGCTCTCTGGGGCTCTAGCGCTCGGCATAACCCTCTCCGGAGTTGGATTTGCTGATGCTAAAGTTGGGGTTAACAAACCGGAATTGCTTCCCAAGGAGTTCACCTCTGTCATTGATGTTGCTGGGTTTTTATCTGATGGCCAGGAAATTAGACTCAAACAAGAAATTGCTGACATTGAGAAGGATACTGGATATAAATTGCGAGTTTTGGCCCAAAATTATCCTGCGACTCCAGGGCTGGCAGTAAAAGATTTTTGGCAAGTGGATGATAGGACAATCGTGTTTGTTGCTGATCCTACATTTGGTAACATATTGAACTTCAATGTTGGAGCGACGGTCGATTTAGACATTCCAAGGAGCTTTTGGAGCCGTTTGGCTGGAAAGTATGGAAACATTTTTTATTGGAAAGAGAAGGGTGAAGATTCGTCTATTGAATCAGCTGTTATGGCAATATCTAGTTGCTTGAGAGAACCCGTCGGCCCAAATAACTGTTCCGAGATAAAGTAAGAGCTTACAGCATCAAAGAATTCTGTTGTGTATTTTTAAACTTTATTTGTATGTTTTGACAGTGATACATGATATATAGTCTTCTCTTGCTACAACCTGCATAACTTAATTGTTTGTTTTTCTGATTCAAGAACTTAGCGTATGTCTATTACTTGAAAAAAATGGCAG

Coding sequence (CDS)

ATGGCGTTCATGCATCTTCATCATCACCTCCCTTCTCCATCTCTCTCATTTTCCAGATCTTCACTGCCGCTTTGCAGATCATCATCTCGTTTCTCTCCGCCGTCATCTCCATTTCCCTCCCAAAAATACACTGATTTCGGCGACCGCCTTCTTCATCTCCCCCAAAAATCTCTGAGTTTCGTGCTCTCTGGGGCTCTAGCGCTCGGCATAACCCTCTCCGGAGTTGGATTTGCTGATGCTAAAGTTGGGGTTAACAAACCGGAATTGCTTCCCAAGGAGTTCACCTCTGTCATTGATGTTGCTGGGTTTTTATCTGATGGCCAGGAAATTAGACTCAAACAAGAAATTGCTGACATTGAGAAGGATACTGGATATAAATTGCGAGTTTTGGCCCAAAATTATCCTGCGACTCCAGGGCTGGCAGTAAAAGATTTTTGGCAAGTGGATGATAGGACAATCGTGTTTGTTGCTGATCCTACATTTGGTAACATATTGAACTTCAATGTTGGAGCGACGGTCGATTTAGACATTCCAAGGAGCTTTTGGAGCCGTTTGGCTGGAAAGTATGGAAACATTTTTTATTGGAAAGAGAAGGGTGAAGATTCGTCTATTGAATCAGCTGTTATGGCAATATCTAGTTGCTTGAGAGAACCCGTCGGCCCAAATAACTGTTCCGAGATAAAGTAA

Protein sequence

MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSQKYTDFGDRLLHLPQKSLSFVLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGPNNCSEIK

Homology

[Close]

BLAST of IVF0003095 vs. ExPASy Swiss-Prot
Match: Q9LVV5 (Thylakoid lumenal 15.0 kDa protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g52970 PE=1 SV=2)

HSP 1 Score: 316.2 bits (809), Expect = 3.0e-85
Identity = 158/201 (78.61%), Postives = 174/201 (86.57%), Query Frame = 0


Query: 28  SSRFSPPSSPFPSQKYTDFGDRLLHLPQKSLSFVLSGALALGITLSGVGFADAKVGVNKP 87
           SSR    SS    +   D  + +     KSLS V SGALALG++LSGVGFADAKVGVNKP
Sbjct: 23  SSREVSSSSRLSLKTSGDEENWVSRFRSKSLSLVFSGALALGLSLSGVGFADAKVGVNKP 82

Query: 88  ELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQNYPATPGLAVKDFWQ 147
           ELLPKEFTSVIDVA FLS+GQE R+ QEIA++EKDTG+KLRVLAQNYP TPGLA+KDFWQ
Sbjct: 83  ELLPKEFTSVIDVADFLSNGQEKRIAQEIANLEKDTGFKLRVLAQNYPVTPGLAIKDFWQ 142

Query: 148 VDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGEDSSIESA 207
           VDD TIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGN+FYWKEKGED+SIE+A
Sbjct: 143 VDDSTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNMFYWKEKGEDASIEAA 202

Query: 208 VMAISSCLREPVGPNNCSEIK 229
           VMAISSCLREPVG NNC+EI+
Sbjct: 203 VMAISSCLREPVGRNNCAEIQ 223

[Close]

BLAST of IVF0003095 vs. ExPASy TrEMBL
Match: A0A1S3CH24 (thylakoid lumenal 15.0 kDa protein 2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103500819 PE=4 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 1.4e-125
Identity = 226/228 (99.12%), Postives = 227/228 (99.56%), Query Frame = 0


Query: 1   MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSQKYTDFGDRLLHLPQKSLSF 60
           MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPS+KYTDFGDRLLHLPQK LSF
Sbjct: 1   MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSKKYTDFGDRLLHLPQKPLSF 60

Query: 61  VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE 120
           VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE
Sbjct: 61  VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE 120

Query: 121 KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180
           KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS
Sbjct: 121 KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180

Query: 181 FWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGPNNCSEIK 229
           FWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGPNNCSEIK
Sbjct: 181 FWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGPNNCSEIK 228

[Close]

BLAST of IVF0003095 vs. ExPASy TrEMBL
Match: A0A0A0KH91 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G446440 PE=4 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 1.6e-121
Identity = 220/228 (96.49%), Postives = 221/228 (96.93%), Query Frame = 0


Query: 1   MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSQKYTDFGDRLLHLPQKSLSF 60
           MAFMHLHHHLPSPSLSFSR S PLCRSSSRFSPPSSP PSQKYTDF  RLLHLPQKSLSF
Sbjct: 1   MAFMHLHHHLPSPSLSFSRPSPPLCRSSSRFSPPSSPLPSQKYTDFSHRLLHLPQKSLSF 60

Query: 61  VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE 120
           VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE
Sbjct: 61  VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE 120

Query: 121 KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180
           KDTGYKLRVLAQNYP TPGLA+KDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS
Sbjct: 121 KDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180

Query: 181 FWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGPNNCSEIK 229
           FWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVG NNCSEIK
Sbjct: 181 FWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGANNCSEIK 228

[Close]

BLAST of IVF0003095 vs. ExPASy TrEMBL
Match: A0A5D3CAH5 (Thylakoid lumenal 15.0 kDa protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G00230 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 8.9e-109
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSQKYTDFGDRLLHLPQKSLSF 60
           MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSQKYTDFGDRLLHLPQKSLSF
Sbjct: 1   MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSQKYTDFGDRLLHLPQKSLSF 60

Query: 61  VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE 120
           VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE
Sbjct: 61  VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE 120

Query: 121 KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180
           KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS
Sbjct: 121 KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180

Query: 181 FWSRLAGKYGNIFYWKEK 199
           FWSRLAGKYGNIFYWKEK
Sbjct: 181 FWSRLAGKYGNIFYWKEK 198

[Close]

BLAST of IVF0003095 vs. ExPASy TrEMBL
Match: A0A6J1EJL7 (thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111433197 PE=4 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 1.3e-107
Identity = 198/232 (85.34%), Postives = 211/232 (90.95%), Query Frame = 0


Query: 1   MAFMHLHHHLPSPSLSFSRSSLPLCRSS----SRFSPPSSPFPSQKYTDFGDRLLHLPQK 60
           MAFMHLHH LPSPSLSF  +S P+ RSS    SRFSPPS  FPS K+TDF + LLHLP K
Sbjct: 1   MAFMHLHHRLPSPSLSFPGASPPVYRSSIFALSRFSPPSVSFPSHKFTDFTNCLLHLPPK 60

Query: 61  SLSFVLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEI 120
           SLSF LS  LALG+ LSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQE RLKQEI
Sbjct: 61  SLSFALSWTLALGVALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEFRLKQEI 120

Query: 121 ADIEKDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLD 180
           ADIEK+TGYKLRVLAQNYP TPGLA+KDFWQVDD+TIVFVADPTFGNILNFNVGA+VDLD
Sbjct: 121 ADIEKETGYKLRVLAQNYPVTPGLAIKDFWQVDDKTIVFVADPTFGNILNFNVGASVDLD 180

Query: 181 IPRSFWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGPNNCSEIK 229
           IPRSFWSRLAGKYGNIFYWKEKGE++SIE+AVMAIS+CLREPVGPNNCSEIK
Sbjct: 181 IPRSFWSRLAGKYGNIFYWKEKGEEASIEAAVMAISNCLREPVGPNNCSEIK 232

[Close]

BLAST of IVF0003095 vs. ExPASy TrEMBL
Match: A0A6J1IMV5 (thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111478838 PE=4 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 3.7e-107
Identity = 198/232 (85.34%), Postives = 210/232 (90.52%), Query Frame = 0


Query: 1   MAFMHLHHHLPSPSLSFSRSSLPLCRS----SSRFSPPSSPFPSQKYTDFGDRLLHLPQK 60
           MAFMHLHH LPSPSLSF  +S P+ RS    SSRFSPPS  FPS K TDF + LLHLP K
Sbjct: 1   MAFMHLHHRLPSPSLSFPGASPPVYRSSIFASSRFSPPSVSFPSHKLTDFTNCLLHLPPK 60

Query: 61  SLSFVLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEI 120
           SLSF LS  LALG+ LSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQE RLKQEI
Sbjct: 61  SLSFALSWTLALGVALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEFRLKQEI 120

Query: 121 ADIEKDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLD 180
           ADIEKDTGYKLRVLAQN+P TPGLA+KDFWQVDD+TIVFVADPTFGNILNFNVGA+VDLD
Sbjct: 121 ADIEKDTGYKLRVLAQNFPVTPGLAIKDFWQVDDKTIVFVADPTFGNILNFNVGASVDLD 180

Query: 181 IPRSFWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGPNNCSEIK 229
           IPRSFWSRLAGKYGNIFYWKEKGE++SIE+AVMAIS+CLREPVGPNNCSEIK
Sbjct: 181 IPRSFWSRLAGKYGNIFYWKEKGEEASIEAAVMAISNCLREPVGPNNCSEIK 232

[Close]

BLAST of IVF0003095 vs. NCBI nr
Match: XP_008462470.1 (PREDICTED: thylakoid lumenal 15.0 kDa protein 2, chloroplastic [Cucumis melo])

HSP 1 Score: 452 bits (1164), Expect = 2.03e-160
Identity = 226/228 (99.12%), Postives = 227/228 (99.56%), Query Frame = 0


Query: 1   MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSQKYTDFGDRLLHLPQKSLSF 60
           MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPS+KYTDFGDRLLHLPQK LSF
Sbjct: 1   MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSKKYTDFGDRLLHLPQKPLSF 60

Query: 61  VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE 120
           VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE
Sbjct: 61  VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE 120

Query: 121 KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180
           KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS
Sbjct: 121 KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180

Query: 181 FWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGPNNCSEIK 228
           FWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGPNNCSEIK
Sbjct: 181 FWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGPNNCSEIK 228

[Close]

BLAST of IVF0003095 vs. NCBI nr
Match: XP_004143269.1 (thylakoid lumenal 15.0 kDa protein 2, chloroplastic [Cucumis sativus] >KGN48184.1 hypothetical protein Csa_003336 [Cucumis sativus])

HSP 1 Score: 439 bits (1129), Expect = 4.41e-155
Identity = 220/228 (96.49%), Postives = 221/228 (96.93%), Query Frame = 0


Query: 1   MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSQKYTDFGDRLLHLPQKSLSF 60
           MAFMHLHHHLPSPSLSFSR S PLCRSSSRFSPPSSP PSQKYTDF  RLLHLPQKSLSF
Sbjct: 1   MAFMHLHHHLPSPSLSFSRPSPPLCRSSSRFSPPSSPLPSQKYTDFSHRLLHLPQKSLSF 60

Query: 61  VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE 120
           VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE
Sbjct: 61  VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE 120

Query: 121 KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180
           KDTGYKLRVLAQNYP TPGLA+KDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS
Sbjct: 121 KDTGYKLRVLAQNYPVTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180

Query: 181 FWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGPNNCSEIK 228
           FWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVG NNCSEIK
Sbjct: 181 FWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGANNCSEIK 228

[Close]

BLAST of IVF0003095 vs. NCBI nr
Match: XP_038881208.1 (thylakoid lumenal 15.0 kDa protein 2, chloroplastic [Benincasa hispida])

HSP 1 Score: 409 bits (1051), Expect = 3.42e-143
Identity = 205/228 (89.91%), Postives = 213/228 (93.42%), Query Frame = 0


Query: 1   MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSQKYTDFGDRLLHLPQKSLSF 60
           MAFMHLHHHLPSPSLSF R S P+ RSS RFSPPS  FPSQK TDF + LLH P+KSLSF
Sbjct: 1   MAFMHLHHHLPSPSLSFFRPSPPVFRSSFRFSPPSFSFPSQKCTDFSNWLLHFPKKSLSF 60

Query: 61  VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE 120
             SGALALGI LSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIA+IE
Sbjct: 61  AFSGALALGIALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIANIE 120

Query: 121 KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180
           KDTGYKLRVLAQNYP TPGLA+KDFW+VDDRTIVFVADPTFGNILNFNVGATVDLDIPRS
Sbjct: 121 KDTGYKLRVLAQNYPLTPGLAIKDFWKVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180

Query: 181 FWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGPNNCSEIK 228
           FWSRLAGKYGNIFYWKEKGED+SIESAVMAIS+CLREPVGPNNCSEIK
Sbjct: 181 FWSRLAGKYGNIFYWKEKGEDASIESAVMAISNCLREPVGPNNCSEIK 228

[Close]

BLAST of IVF0003095 vs. NCBI nr
Match: KAA0063815.1 (thylakoid lumenal 15.0 kDa protein 2 [Cucumis melo var. makuwa] >TYK07309.1 thylakoid lumenal 15.0 kDa protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 397 bits (1019), Expect = 2.97e-138
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSQKYTDFGDRLLHLPQKSLSF 60
           MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSQKYTDFGDRLLHLPQKSLSF
Sbjct: 1   MAFMHLHHHLPSPSLSFSRSSLPLCRSSSRFSPPSSPFPSQKYTDFGDRLLHLPQKSLSF 60

Query: 61  VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE 120
           VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE
Sbjct: 61  VLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIE 120

Query: 121 KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180
           KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS
Sbjct: 121 KDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRS 180

Query: 181 FWSRLAGKYGNIFYWKEK 198
           FWSRLAGKYGNIFYWKEK
Sbjct: 181 FWSRLAGKYGNIFYWKEK 198

[Close]

BLAST of IVF0003095 vs. NCBI nr
Match: KAG6604403.1 (Thylakoid lumenal 15.0 kDa protein 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 393 bits (1010), Expect = 6.99e-137
Identity = 199/232 (85.78%), Postives = 211/232 (90.95%), Query Frame = 0


Query: 1   MAFMHLHHHLPSPSLSFSRSSLPLCRSS----SRFSPPSSPFPSQKYTDFGDRLLHLPQK 60
           MAFMHLHH LPSPSLSFS +S P+ RSS    SRFSPPS  FPS K TDF + LLHLP K
Sbjct: 1   MAFMHLHHRLPSPSLSFSGASPPVYRSSIFASSRFSPPSVSFPSHKLTDFTNCLLHLPPK 60

Query: 61  SLSFVLSGALALGITLSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEIRLKQEI 120
           SLSF LS  LALG+ LSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQE RLKQEI
Sbjct: 61  SLSFALSWTLALGVALSGVGFADAKVGVNKPELLPKEFTSVIDVAGFLSDGQEFRLKQEI 120

Query: 121 ADIEKDTGYKLRVLAQNYPATPGLAVKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLD 180
           ADIEK+TGYKLRVLAQNYP TPGLA+KDFWQVDD+TIVFVADPTFGNILNFNVGA+VDLD
Sbjct: 121 ADIEKETGYKLRVLAQNYPVTPGLAIKDFWQVDDKTIVFVADPTFGNILNFNVGASVDLD 180

Query: 181 IPRSFWSRLAGKYGNIFYWKEKGEDSSIESAVMAISSCLREPVGPNNCSEIK 228
           IPRSFWSRLAGKYGNIFYWKEKGE++SIE+AVMAIS+CLREPVGPNNCSEIK
Sbjct: 181 IPRSFWSRLAGKYGNIFYWKEKGEEASIEAAVMAISNCLREPVGPNNCSEIK 232

[Close]

BLAST of IVF0003095 vs. TAIR 10
Match: AT5G52970.1 (thylakoid lumen 15.0 kDa protein )

HSP 1 Score: 316.2 bits (809), Expect = 2.1e-86
Identity = 158/201 (78.61%), Postives = 174/201 (86.57%), Query Frame = 0


Query: 28  SSRFSPPSSPFPSQKYTDFGDRLLHLPQKSLSFVLSGALALGITLSGVGFADAKVGVNKP 87
           SSR    SS    +   D  + +     KSLS V SGALALG++LSGVGFADAKVGVNKP
Sbjct: 23  SSREVSSSSRLSLKTSGDEENWVSRFRSKSLSLVFSGALALGLSLSGVGFADAKVGVNKP 82

Query: 88  ELLPKEFTSVIDVAGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQNYPATPGLAVKDFWQ 147
           ELLPKEFTSVIDVA FLS+GQE R+ QEIA++EKDTG+KLRVLAQNYP TPGLA+KDFWQ
Sbjct: 83  ELLPKEFTSVIDVADFLSNGQEKRIAQEIANLEKDTGFKLRVLAQNYPVTPGLAIKDFWQ 142

Query: 148 VDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGEDSSIESA 207
           VDD TIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGN+FYWKEKGED+SIE+A
Sbjct: 143 VDDSTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNMFYWKEKGEDASIEAA 202

Query: 208 VMAISSCLREPVGPNNCSEIK 229
           VMAISSCLREPVG NNC+EI+
Sbjct: 203 VMAISSCLREPVGRNNCAEIQ 223

The following BLAST results are available for this feature:

BLAST of IVF0003095 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LVV5	3.0e-85	78.61	Thylakoid lumenal 15.0 kDa protein 2, chloroplastic OS=Arabidopsis thaliana OX=3...	[more]

BLAST of IVF0003095 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CH24	1.4e-125	99.12	thylakoid lumenal 15.0 kDa protein 2, chloroplastic OS=Cucumis melo OX=3656 GN=L...	[more]
A0A0A0KH91	1.6e-121	96.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G446440 PE=4 SV=1	[more]
A0A5D3CAH5	8.9e-109	100.00	Thylakoid lumenal 15.0 kDa protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A6J1EJL7	1.3e-107	85.34	thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like OS=Cucurbita moschata O...	[more]
A0A6J1IMV5	3.7e-107	85.34	thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like OS=Cucurbita maxima OX=...	[more]

BLAST of IVF0003095 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462470.1	2.03e-160	99.12	PREDICTED: thylakoid lumenal 15.0 kDa protein 2, chloroplastic [Cucumis melo]	[more]
XP_004143269.1	4.41e-155	96.49	thylakoid lumenal 15.0 kDa protein 2, chloroplastic [Cucumis sativus] >KGN48184....	[more]
XP_038881208.1	3.42e-143	89.91	thylakoid lumenal 15.0 kDa protein 2, chloroplastic [Benincasa hispida]	[more]
KAA0063815.1	2.97e-138	100.00	thylakoid lumenal 15.0 kDa protein 2 [Cucumis melo var. makuwa] >TYK07309.1 thyl...	[more]
KAG6604403.1	6.99e-137	85.78	Thylakoid lumenal 15.0 kDa protein 2, chloroplastic, partial [Cucurbita argyrosp...	[more]

BLAST of IVF0003095 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52970.1	2.1e-86	78.61	thylakoid lumen 15.0 kDa protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35514	FAMILY NOT NAMED	coord: 8..228

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0003095.3	IVF0003095.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane