IVF0002954 (gene) Melon (IVF77) v1

Overview


Name	IVF0002954
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	RecQ-mediated genome instability protein 1
Location	chr02: 22928108 .. 22932652 (-)
RNA-Seq Expression	IVF0002954
Synteny	IVF0002954

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCGCTGCACACATCAAGTGGAGGGAAGAAGGCACAAATTTCCGAGTGAAGAAGGAGGGAAGCCACGATGACCAGAAGGCGCCTTCGCCTGAGCTCGTCTTCCGACGAAGACTTGGAACAAGACTCTCACTGCCTTGATTCCTCCCCAACCTCCCTCCAACCAATCATTCTCGACAATCTCAACTCTCATTTTAATCCCAATGTTTCTGAACCCGTCCAAGTTCCCGATTCCGACGACGACGAACAACATTTTATCGACGTCTCCGACCATCTCTCCCCTCCTTCTCCGGATTCTGATCATTCTCTCCCTCACTCCCCGGACCCCAATCCACTCAGTCCTGGTCTCGCTTCCACTCACCCCCCGTGTCCTGTAAGTGACTTCCTTCGGGGACTTGGTTTAAGCTTGAAGAGAGAGTGGTTGGGTGCCTGTATCCGCTCTCTACAAGAGTCTGTACCAGGTTTCTTTAGCCTCAACCATTCGGCGAAAGGAAAGCTGTGTTTCGAGCAGTTTTTGGTTTCTGATATGAATTATGCGGGTGCTGGTGTCCTGCCTGAAAATGTTGATTCTATGCATCTCGTTGATCTCCCTGGTCCGTACGTACTGCAGGTTATTTGTGCCAGTTCCTTGAGTTTATTCCCATGAATTTCTTTTTGGTTATGATGTAATTTTGGTCGCTGTACGAAATTTCAGAGGTTATAAGAATGACCTGCTGCTTGAGGTGGGCAGGGTTGTAGAGTCCTAGCTGAGTTGTTTTCCTTTTCAGGTCGATGAAATAGTTAACATCAGTTGTGCTCTGAAAGGTAGATATCAGACTGCCCCTGCTAATATTAAGAGGTGCCTTAAACTGTCAATGACGGATGGTGTTCAACGAGTTTTTGGGATGGAATACAGGCCTATTAAGGATCTTGAAGTTTTGGCCCCTGCTGGGTTGAAGGTTTCTTATCTTTCTCAATCCTCGATCAATTGTTCTCTTTTTTCGTCAACCAAGTTTAGGTGCTTCGAAACTAGTAGATTAGTTGATGATAGGGATCAATTATTTATAGCTTTTGTACAGGTAGTAATCAGCGATGTAAGTGTACGACGTGGGCTTCTAATGCTAGTACCTGAAGCTTTTGAGGTTCTAGGAGGTCTGGTTGAAGAATTGGAGGCAGCTCGGAAGCGGCTTGTTGATGAAGTGAACAAGCCACCTAGAGGAAGAAGGTATTATTAATGCCTAGTACATAGTTTTCATCCATTCCTTTCTTTGTTGGGTTCCATAGTACAATTTTCCGTGTCCATTGTCCGAGGAAGATTTCTTTTTCCGTTGTTTAGAGCTCGTTCTTTTATCTTTTCAATTGAGTGCTAACGCACTTTAAACTTGCATTTTTACACTGTTATTTTTTTGGTGGACTTTGTCTTTCTTTTCAGAAGAGCTTATCATAGCAACATCATGTCTTCCACTGTTTTCTGTTATTCAATAATTTGTGATTTGTATACTTTGTTCAGAACGAGAACAGGCGTGGTTCCTTCTTTGGCAAGTAGAGCAACACATGCTGCATGGCCATCAGACAATGTTCAAGAGCCTGGGCATTCTAGTAGAATGGTGGATGCTGAACCCTCTCGTTCAGACCAAGGTACTAATCGGTTAAAATTTCCACGTTCTTTCTTTCTGGGGGAAAAAGAAACTTTTTTTCACATTTCCAACTTTATGTTCAGTGTGTCAGATTCCTGGAGACCAATTAGCTGCTACCAATCTCTATCTTGGGCAATGTTGCCTAATTTCATACTTTCATTATGTGCATTTTTCTTTCTCCTGTTCTTTCAACTATTGATACAGATCGTAGTGGGGAGAAACAGAGATAGGACAAGAAAACAAAATATGGAAGTGAAGGGGAAATGCTTGTCCACTCTTAATATTGTAACTAAATAACTAATTTATTCTGGAATGAAAAAAAATTATAAACTTCAAAGTAGGAAGAAGAAAACTCCTTACTAGAATTCTGATGTAAATCTCGTGGTCTAGTAAAATTATTTGAATATGAAGCCTAACGTTTATCTGAATATAAAAAGATGCACAATTGCACAAGGCATTTGATATTTTCCAATAGATTAGCCAAGAATGTCAGCCAAGTTTATAATGGATGTGTTTTATTAATTATTGTTTTTTTGGTCTTGAATTATATGTTCAATCTCTGTAAACTGGAAAGAGCTCTGTTGTTTAGGCAGTCCATCACCAAATTTTCTTTGTTATTGGTCTTGGCTATCAGGTGCTCGCCTGTTCCATAGGGGAAATGAAGCATTTTCTGCTCCAGTTGCTGATGCATTTACTACACCAGTCAGTAGAACGAATGCTAATTCTGAGTTATCTTCTAATTTTGTTTCAAATGTTGAGGAGATTCGTTCACATTCCATTCCCAGTGGTAGAGCTAGTGCTGAGCCTACTATTGTACCCAATTCGGTGGAGGACACCAGTGTGGTCAATTCAGTGGATGATACCAATACGGTCAATTCAGTAAACGATTCGAATGCGGTCAACTCGGTAGAGGATACCATCATGGTTGACATTGAGCATCCTCTCATTTTATCTGGCGATAGAGAAATTCCTTTCACTTACTTGGCTAGTTTGTCGGCTAAGTTGGCAGCAGCGAAGGAAAAATGTCCATCAGTTCGGGGAAGAATCAAGGTGGGATAAAAATTCATATTTCTTCACTAGAGGACTAACACTAACACTCTTGTTCCAAATGAAAGCAGGGCATTTTAGTTTGTTTGTAAGCTCCCTACTTGAACAAGATTTGTTCTATTCCCTTGAGTTCTAAAGCTTGTTCATTCTGTAAGCTTAGAATTTGTTTCAACAATCCACTGGTCAGATTGATTATTTGTTGGTTTAGGTAACTAACTCGTCATTAACACAGTCAACGTATGTGCCAACTTACAGCAGTATTAGATGAATGTTCAATCTCGTTCCTGTTTATCCCGAGTGGCACTGCTGAGGGTAAGGAAATCGTATATGTGGATGACGTGTTGTAGTTATTATTGGAAGCATGGAGTTACATCTCTGGCTGATCAATATATATAGAATTTGGAGCTTGGTTATTATAAGCATAATATTTGAACAATCCGTTTTGTTCCTTTTGACTTAAGTGCTTGGAAACTGCTCATATTGATATACTGAGCATGGCATGGTGAATGAAAATGAAATTAAATGTAAACGGAATTTAGTTGTTTCTATACTTTTTACTGAAATTGAGAATATAATCTTTGTGTTTGTAGTGCTTTTTGACTGGTGTAAAAGGATTTCAATTCAAGCAAAGGACAAGATACGAGCTACGTGTGTTTGTTGATGACGGCAGCCTCATTTCTGAGGTCCTCATTGATAACGAGGTGAGTCAAATACCATACAGTTTATGCGTACCCCAGTCAAAGAGAACCATATCCGACCGCTTCTTATGTTTGATTATTAGGTTGTGCAAAAAGCGATTGGCCATTCTCCAAAGGATGTTACGGACGCTATGGATTCTTCTGATGTCAAAGTAGTGAGTGCTATGAAGGAGACTTTGAGACAGTTCCAAATTTTCTTAATAAATTTTGAGGTAAATTTATGGCTTCAAGTATTTCTAACTCCCAGTTATTGCTTCCTCCCGTCCCTTTAATTTCAAAAGATGATGTCTTTTCTGGATATTACTTGCATATTCTGTATACTTTGAGTTAGTTTAAAAGTACTATTCTCTTATATGTTGTTTCATCGAAGGGTACAATGCTGGTTGAGATGAACAAAACGTCTTCTCTGCCAGTTGTCCTTGAGATGGCGGAGGGTTGTCTGGAATCTGATGCTCGGTTGCTTTTGAGAAGACTTGCGTGTTCAAATGCCGTTCCAACTGATGAGCATGCCCGTATTATAGACGTATCCCCTTAATTGAACGCAAGAAGGAAAAAGTCTCAAGGCCAACAAATTTTCAGCGAAGAAAAGTCATTTTTATCACAGGCTATCTTGGACTGGAGATCAAGGCAGTGAAGCTTCTCTGGAGCTACACAATCTCATTACCCGTGACAAATGAAAAGAGCTTGATGGGCGAAGCCCAGATTCACATATGTCGTCAAACTGACGATAATTGCAAGCACGAAATCAATGAAACGTGAAGCCAATGGGTTTACAGGCCACCAACATCCAGAGAAACCAAGTCAGAGTTCCTCCTGGAAGTTTTATTCGGGCCATTTGTCAGGGGAAAGCCTAAACTGATCGAGATTGGTAATTTTGTATTTTTGAAAAATCTATCGGGTCAACATCCATGGCAAAGAGAATGAGAAGGCAACCAACCCGGTGTCGGCAGAAGGGCCGTGGTGAAGATTTTAGAGGATGCTATGAATGCTTCTACAACCAGCTCGGTGACATTCCATATTTATCATTTCTTTCGAACGTCCTCTGTTGTTCAACATGTACATGCTCACAGTAATTCTAGTTATGAAAAAGTACACTGATTGGCACAATATATTCTTGTAATGAGTTTGTTACTTCGTCGATGTCAGAATGTAATACATTCTTTGGATTCATTATTATTAGATTGCGG

mRNA sequence

CCCGCTGCACACATCAAGTGGAGGGAAGAAGGCACAAATTTCCGAGTGAAGAAGGAGGGAAGCCACGATGACCAGAAGGCGCCTTCGCCTGAGCTCGTCTTCCGACGAAGACTTGGAACAAGACTCTCACTGCCTTGATTCCTCCCCAACCTCCCTCCAACCAATCATTCTCGACAATCTCAACTCTCATTTTAATCCCAATGTTTCTGAACCCGTCCAAGTTCCCGATTCCGACGACGACGAACAACATTTTATCGACGTCTCCGACCATCTCTCCCCTCCTTCTCCGGATTCTGATCATTCTCTCCCTCACTCCCCGGACCCCAATCCACTCAGTCCTGGTCTCGCTTCCACTCACCCCCCGTGTCCTGTAAGTGACTTCCTTCGGGGACTTGGTTTAAGCTTGAAGAGAGAGTGGTTGGGTGCCTGTATCCGCTCTCTACAAGAGTCTGTACCAGGTTTCTTTAGCCTCAACCATTCGGCGAAAGGAAAGCTGTGTTTCGAGCAGTTTTTGGTTTCTGATATGAATTATGCGGGTGCTGGTGTCCTGCCTGAAAATGTTGATTCTATGCATCTCGTTGATCTCCCTGGTCGATGAAATAGTTAACATCAGTTGTGCTCTGAAAGGTAGATATCAGACTGCCCCTGCTAATATTAAGAGGTGCCTTAAACTGTCAATGACGGATGGTGTTCAACGAGTTTTTGGGATGGAATACAGGCCTATTAAGGATCTTGAAGTTTTGGCCCCTGCTGGGTTGAAGGTAGTAATCAGCGATGTAAGTGTACGACGTGGGCTTCTAATGCTAGTACCTGAAGCTTTTGAGGTTCTAGGAGGTCTGGTTGAAGAATTGGAGGCAGCTCGGAAGCGGCTTGTTGATGAAGTGAACAAGCCACCTAGAGGAAGAAGAACGAGAACAGGCGTGGTTCCTTCTTTGGCAAGTAGAGCAACACATGCTGCATGGCCATCAGACAATGTTCAAGAGCCTGGGCATTCTAGTAGAATGGTGGATGCTGAACCCTCTCGTTCAGACCAAGGTGCTCGCCTGTTCCATAGGGGAAATGAAGCATTTTCTGCTCCAGTTGCTGATGCATTTACTACACCAGTCAGTAGAACGAATGCTAATTCTGAGTTATCTTCTAATTTTGTTTCAAATGTTGAGGAGATTCGTTCACATTCCATTCCCAGTGGTAGAGCTAGTGCTGAGCCTACTATTGTACCCAATTCGGTGGAGGACACCAGTGTGGTCAATTCAGTGGATGATACCAATACGGTCAATTCAGTAAACGATTCGAATGCGGTCAACTCGGTAGAGGATACCATCATGGTTGACATTGAGCATCCTCTCATTTTATCTGGCGATAGAGAAATTCCTTTCACTTACTTGGCTAGTTTGTCGGCTAAGTTGGCAGCAGCGAAGGAAAAATGTCCATCAGTTCGGGGAAGAATCAAGTGCTTTTTGACTGGTGTAAAAGGATTTCAATTCAAGCAAAGGACAAGATACGAGCTACGTGTGTTTGTTGATGACGGCAGCCTCATTTCTGAGGTCCTCATTGATAACGAGGTTGTGCAAAAAGCGATTGGCCATTCTCCAAAGGATGTTACGGACGCTATGGATTCTTCTGATGTCAAAGTAGTGAGTGCTATGAAGGAGACTTTGAGACAGTTCCAAATTTTCTTAATAAATTTTGAGGGTACAATGCTGGTTGAGATGAACAAAACGTCTTCTCTGCCAGTTGTCCTTGAGATGGCGGAGGGTTGTCTGGAATCTGATGCTCGGTTGCTTTTGAGAAGACTTGCGTGTTCAAATGCCGTTCCAACTGATGAGCATGCCCGTATTATAGACGTATCCCCTTAATTGAACGCAAGAAGGAAAAAGTCTCAAGGCCAACAAATTTTCAGCGAAGAAAAGTCATTTTTATCACAGGCTATCTTGGACTGGAGATCAAGGCAGTGAAGCTTCTCTGGAGCTACACAATCTCATTACCCGTGACAAATGAAAAGAGCTTGATGGGCGAAGCCCAGATTCACATATGTCGTCAAACTGACGATAATTGCAAGCACGAAATCAATGAAACGTGAAGCCAATGGGTTTACAGGCCACCAACATCCAGAGAAACCAAGTCAGAGTTCCTCCTGGAAGTTTTATTCGGGCCATTTGTCAGGGGAAAGCCTAAACTGATCGAGATTGGTAATTTTGTATTTTTGAAAAATCTATCGGGTCAACATCCATGGCAAAGAGAATGAGAAGGCAACCAACCCGGTGTCGGCAGAAGGGCCGTGGTGAAGATTTTAGAGGATGCTATGAATGCTTCTACAACCAGCTCGGTGACATTCCATATTTATCATTTCTTTCGAACGTCCTCTGTTGTTCAACATGTACATGCTCACAGTAATTCTAGTTATGAAAAAGTACACTGATTGGCACAATATATTCTTGTAATGAGTTTGTTACTTCGTCGATGTCAGAATGTAATACATTCTTTGGATTCATTATTATTAGATTGCGG

Coding sequence (CDS)

ATGCGGGTGCTGGTGTCCTGCCTGAAAATGTTGATTCTATGCATCTCGTTGATCTCCCTGGTCGATGAAATAGTTAACATCAGTTGTGCTCTGAAAGGTAGATATCAGACTGCCCCTGCTAATATTAAGAGGTGCCTTAAACTGTCAATGACGGATGGTGTTCAACGAGTTTTTGGGATGGAATACAGGCCTATTAAGGATCTTGAAGTTTTGGCCCCTGCTGGGTTGAAGGTAGTAATCAGCGATGTAAGTGTACGACGTGGGCTTCTAATGCTAGTACCTGAAGCTTTTGAGGTTCTAGGAGGTCTGGTTGAAGAATTGGAGGCAGCTCGGAAGCGGCTTGTTGATGAAGTGAACAAGCCACCTAGAGGAAGAAGAACGAGAACAGGCGTGGTTCCTTCTTTGGCAAGTAGAGCAACACATGCTGCATGGCCATCAGACAATGTTCAAGAGCCTGGGCATTCTAGTAGAATGGTGGATGCTGAACCCTCTCGTTCAGACCAAGGTGCTCGCCTGTTCCATAGGGGAAATGAAGCATTTTCTGCTCCAGTTGCTGATGCATTTACTACACCAGTCAGTAGAACGAATGCTAATTCTGAGTTATCTTCTAATTTTGTTTCAAATGTTGAGGAGATTCGTTCACATTCCATTCCCAGTGGTAGAGCTAGTGCTGAGCCTACTATTGTACCCAATTCGGTGGAGGACACCAGTGTGGTCAATTCAGTGGATGATACCAATACGGTCAATTCAGTAAACGATTCGAATGCGGTCAACTCGGTAGAGGATACCATCATGGTTGACATTGAGCATCCTCTCATTTTATCTGGCGATAGAGAAATTCCTTTCACTTACTTGGCTAGTTTGTCGGCTAAGTTGGCAGCAGCGAAGGAAAAATGTCCATCAGTTCGGGGAAGAATCAAGTGCTTTTTGACTGGTGTAAAAGGATTTCAATTCAAGCAAAGGACAAGATACGAGCTACGTGTGTTTGTTGATGACGGCAGCCTCATTTCTGAGGTCCTCATTGATAACGAGGTTGTGCAAAAAGCGATTGGCCATTCTCCAAAGGATGTTACGGACGCTATGGATTCTTCTGATGTCAAAGTAGTGAGTGCTATGAAGGAGACTTTGAGACAGTTCCAAATTTTCTTAATAAATTTTGAGGGTACAATGCTGGTTGAGATGAACAAAACGTCTTCTCTGCCAGTTGTCCTTGAGATGGCGGAGGGTTGTCTGGAATCTGATGCTCGGTTGCTTTTGAGAAGACTTGCGTGTTCAAATGCCGTTCCAACTGATGAGCATGCCCGTATTATAGACGTATCCCCTTAA

Protein sequence

MRVLVSCLKMLILCISLISLVDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVISDVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVPSLASRATHAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAFSAPVADAFTTPVSRTNANSELSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVNSVDDTNTVNSVNDSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKCPSVRGRIKCFLTGVKGFQFKQRTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDAMDSSDVKVVSAMKETLRQFQIFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLRRLACSNAVPTDEHARIIDVSP

Homology

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BLAST of IVF0002954 vs. ExPASy Swiss-Prot
Match: Q5XUX6 (RecQ-mediated genome instability protein 1 OS=Arabidopsis thaliana OX=3702 GN=RMI1 PE=1 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 1.9e-96
Identity = 231/468 (49.36%), Postives = 295/468 (63.03%), Query Frame = 0


Query: 5   VSCLKMLILCISLISLVDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRP 64
           V+ +  + L    +  VDEIVNI C LKGRY+ A A +KRCLKLSMTDGVQRVFGMEYRP
Sbjct: 163 VASMNRIELAGPFVLQVDEIVNIGCPLKGRYENANAGLKRCLKLSMTDGVQRVFGMEYRP 222

Query: 65  IKDLEVLAPAGLKVVISDVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRG 124
           IKDL+VLAPAGLK+V+S V VR GLLMLVPE  EVLGG+VEELE ARKRLV EVNKPPRG
Sbjct: 223 IKDLQVLAPAGLKIVVSSVQVRHGLLMLVPEIVEVLGGMVEELEEARKRLVVEVNKPPRG 282

Query: 125 RRTRTGVVPSLASRATHAAW------PSDNVQEPG---HSSRMVDAEPSRSDQGARLF-- 184
           +RTR GVVPSL +RAT AAW        ++V + G   +SS   +A  ++++QG  +   
Sbjct: 283 KRTRVGVVPSLTTRATLAAWSLNGNDTGNHVHDTGNHVNSSASGNASHTQANQGIPVHVT 342

Query: 185 --HRGNEAFSAPVADA-FTTPVSR--------TNANSELSSNFV----SNVEEIRS---- 244
             H  + A   P+A       VSR         +A+ E + + +    SN+    S    
Sbjct: 343 RTHNSSRAMDEPLASTNVGATVSRVEHMQIDTASAHGERTFSDIHSTSSNIHRAASTAGT 402

Query: 245 ----HSIPSGRASAEPTIVPNSVEDTSVVNS-----------VDDTNTVNSVNDSNAVNS 304
                   SG  S    +  NS++ TS V S           V DT T    +DS  V +
Sbjct: 403 GTSCSGACSGARSFANNVGGNSLDQTSNVTSFVEEMHIDTGRVRDTTTHIYGSDSGGVAA 462

Query: 305 VEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKCPSVRGRIKCFLTGVKGFQFK 364
               ++VD+E P +LS + E PFTYLA LS K A  K+    V+GRIKCFLTGVK FQFK
Sbjct: 463 EFSNMVVDLEGPSVLSTNTEKPFTYLAELSQKWAVMKDTIHFVQGRIKCFLTGVKKFQFK 522

Query: 365 QRTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDAMDSSDVKVVSA-MKETLRQ 424
           Q++ YEL  +VDDGSLI E+L+ N+VVQK IGHS  +VT A+ SS    ++A MKE L++
Sbjct: 523 QQSTYELLCYVDDGSLICEILLHNDVVQKRIGHSSMEVTAALSSSAPTSLNAMMKEKLKR 582

Query: 425 FQIFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLRRLACSN 427
           FQ+FL +FEG M+VEMN++S  PV +EM +GC  +DARLLL R+  S+
Sbjct: 583 FQLFLADFEGIMVVEMNRSSQYPVAIEMNQGCSLTDARLLLDRIKSSS 630

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BLAST of IVF0002954 vs. ExPASy Swiss-Prot
Match: Q7XRV0 (RecQ-mediated genome instability protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RMI1 PE=3 SV=2)

HSP 1 Score: 257.3 bits (656), Expect = 3.2e-67
Identity = 185/524 (35.31%), Postives = 272/524 (51.91%), Query Frame = 0


Query: 17  LISLVDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGL 76
           L+  VDEIVN+S  L+ RY+ A A  KRCLKLSMTDG+QR++GMEYRPIKDLEVLAPAG 
Sbjct: 281 LVLQVDEIVNLSAPLRERYRDAHAGPKRCLKLSMTDGIQRIYGMEYRPIKDLEVLAPAGF 340

Query: 77  KVVISDVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVPSLA 136
           K+VI +V +RRGL MLVPE  E+LGG+ +EL+ AR RLV EVNKPPRG+R + G+   L+
Sbjct: 341 KIVIRNVHIRRGLFMLVPEVIEILGGVDDELDEARNRLVSEVNKPPRGKRKQGGL--PLS 400

Query: 137 SRATHAAWPSD-----------------NVQEP------GHSSR-------MVD------ 196
           SRAT AAWP++                 N   P       H+S+       MVD      
Sbjct: 401 SRATLAAWPTNANATNDAEQGASVPRTVNTPHPTRLGNASHASQVGRTTQPMVDNLIPHV 460

Query: 197 ------------------------------------------------------------ 256
                                                                       
Sbjct: 461 VVSNAQEQSRHIQEITMQGQPTSLNRHNKEASASYRYNAQCSISGTTRAMADEHVLVSNA 520

Query: 257 -------AEPSRSDQGARLFHRGNEAFSAPV----ADAFTTPVSRTNANSELSSNFV-SN 316
                   E +  DQ   L  R  EA ++      A    +  +R  A+  +  +FV +N
Sbjct: 521 QEQSPHIQEITMQDQSTSLNGRNKEASASTSYRYNAQCSISGTTRAMADERVDPSFVGNN 580

Query: 317 VEE---------IRSHSIPSGRASAEPTI-VPNSVEDTSVVNSVDDTNTVNSVNDSNAVN 376
           V E         ++ H   S  +  E ++  P+  +     + V +T T +   ++   +
Sbjct: 581 VHEQMQRVQGITMQDHISASSESKRELSVTTPSGYDSRLAPHGVGNTGTRS--GEATRSS 640

Query: 377 SVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKCPSVRGRIKCFLTGVKGFQF 423
           +V+D I  +I HP+ L G+ E PFTY+ ++ A     ++  P ++G+IK  +T VK FQ+
Sbjct: 641 NVDDGIN-NIGHPISLCGENEKPFTYIFNMLADWGVQQDTVPYIQGKIKGLITSVKRFQY 700

[Close]

BLAST of IVF0002954 vs. ExPASy Swiss-Prot
Match: Q7ZVM9 (RecQ-mediated genome instability protein 1 OS=Danio rerio OX=7955 GN=rmi1 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.3e-07
Identity = 32/65 (49.23%), Postives = 43/65 (66.15%), Query Frame = 0


Query: 44  RCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKV-VISDVSVRRGLLMLVPEAFEVLGG 103
           R L L +TDGVQ + GMEYRPI  L    P G K+ ++  ++VR G+L+L  E  +VLGG
Sbjct: 132 RMLMLQLTDGVQNLEGMEYRPIPALNANLPPGTKLQLVGPIAVRLGVLLLKAENIKVLGG 191

Query: 104 LVEEL 108
            VE+L
Sbjct: 192 EVEQL 196

[Close]

BLAST of IVF0002954 vs. ExPASy Swiss-Prot
Match: Q5ZHV8 (RecQ-mediated genome instability protein 1 OS=Gallus gallus OX=9031 GN=RMI1 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 4.8e-07
Identity = 38/112 (33.93%), Postives = 56/112 (50.00%), Query Frame = 0


Query: 44  RCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI-SDVSVRRGLLMLVPEAFEVLGG 103
           R L L +TDG+ ++ GMEY+P+  L    P G K+ +  +V+ R G+L+L PE  ++LGG
Sbjct: 133 RMLMLQLTDGIHQIQGMEYQPVPVLHSNLPPGTKITVHGNVAYRLGVLLLKPENVKLLGG 192

Query: 104 LVEEL------EAARKRLVDEVNKPPRGRRT-RTGVVPSLASRATHAAWPSD 148
            V+ L      E    RL+ E   P   R+     +VP           PSD
Sbjct: 193 EVDALLEEYSQERVLARLLGEAENPDSVRQPGHEQIVPGPVDELGQTLGPSD 244

[Close]

BLAST of IVF0002954 vs. ExPASy Swiss-Prot
Match: Q9H9A7 (RecQ-mediated genome instability protein 1 OS=Homo sapiens OX=9606 GN=RMI1 PE=1 SV=3)

HSP 1 Score: 56.6 bits (135), Expect = 8.2e-07
Identity = 31/69 (44.93%), Postives = 44/69 (63.77%), Query Frame = 0


Query: 40  ANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI-SDVSVRRGLLMLVPEAFE 99
           A   R L L +TDG+ ++ GMEY+PI  L    P G K++I  ++S R G+L+L PE  +
Sbjct: 129 AKPSRMLMLQLTDGIVQIQGMEYQPIPILHSDLPPGTKILIYGNISFRLGVLLLKPENVK 188

Query: 100 VLGGLVEEL 108
           VLGG V+ L
Sbjct: 189 VLGGEVDAL 197

[Close]

BLAST of IVF0002954 vs. ExPASy TrEMBL
Match: A0A1S3CLE1 (recQ-mediated genome instability protein 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502304 PE=4 SV=1)

HSP 1 Score: 831.6 bits (2147), Expect = 1.5e-237
Identity = 441/441 (100.00%), Postives = 441/441 (100.00%), Query Frame = 0


Query: 1   MRVLVSCLKMLILCISLISLVDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGM 60
           MRVLVSCLKMLILCISLISLVDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGM
Sbjct: 1   MRVLVSCLKMLILCISLISLVDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGM 60

Query: 61  EYRPIKDLEVLAPAGLKVVISDVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNK 120
           EYRPIKDLEVLAPAGLKVVISDVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNK
Sbjct: 61  EYRPIKDLEVLAPAGLKVVISDVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNK 120

Query: 121 PPRGRRTRTGVVPSLASRATHAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAF 180
           PPRGRRTRTGVVPSLASRATHAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAF
Sbjct: 121 PPRGRRTRTGVVPSLASRATHAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAF 180

Query: 181 SAPVADAFTTPVSRTNANSELSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVN 240
           SAPVADAFTTPVSRTNANSELSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVN
Sbjct: 181 SAPVADAFTTPVSRTNANSELSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVN 240

Query: 241 SVDDTNTVNSVNDSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKCP 300
           SVDDTNTVNSVNDSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKCP
Sbjct: 241 SVDDTNTVNSVNDSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKCP 300

Query: 301 SVRGRIKCFLTGVKGFQFKQRTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDA 360
           SVRGRIKCFLTGVKGFQFKQRTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDA
Sbjct: 301 SVRGRIKCFLTGVKGFQFKQRTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDA 360

Query: 361 MDSSDVKVVSAMKETLRQFQIFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLR 420
           MDSSDVKVVSAMKETLRQFQIFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLR
Sbjct: 361 MDSSDVKVVSAMKETLRQFQIFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLR 420

Query: 421 RLACSNAVPTDEHARIIDVSP 442
           RLACSNAVPTDEHARIIDVSP
Sbjct: 421 RLACSNAVPTDEHARIIDVSP 441

[Close]

BLAST of IVF0002954 vs. ExPASy TrEMBL
Match: A0A1S3CLI7 (RecQ-mediated genome instability protein 1 OS=Cucumis melo OX=3656 GN=LOC103502304 PE=3 SV=1)

HSP 1 Score: 801.6 bits (2069), Expect = 1.7e-228
Identity = 421/421 (100.00%), Postives = 421/421 (100.00%), Query Frame = 0


Query: 21  VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI 80
           VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI
Sbjct: 181 VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI 240

Query: 81  SDVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVPSLASRAT 140
           SDVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVPSLASRAT
Sbjct: 241 SDVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVPSLASRAT 300

Query: 141 HAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAFSAPVADAFTTPVSRTNANSE 200
           HAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAFSAPVADAFTTPVSRTNANSE
Sbjct: 301 HAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAFSAPVADAFTTPVSRTNANSE 360

Query: 201 LSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVNSVDDTNTVNSVNDSNAVNSV 260
           LSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVNSVDDTNTVNSVNDSNAVNSV
Sbjct: 361 LSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVNSVDDTNTVNSVNDSNAVNSV 420

Query: 261 EDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKCPSVRGRIKCFLTGVKGFQFKQ 320
           EDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKCPSVRGRIKCFLTGVKGFQFKQ
Sbjct: 421 EDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKCPSVRGRIKCFLTGVKGFQFKQ 480

Query: 321 RTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDAMDSSDVKVVSAMKETLRQFQ 380
           RTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDAMDSSDVKVVSAMKETLRQFQ
Sbjct: 481 RTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDAMDSSDVKVVSAMKETLRQFQ 540

Query: 381 IFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLRRLACSNAVPTDEHARIIDVS 440
           IFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLRRLACSNAVPTDEHARIIDVS
Sbjct: 541 IFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLRRLACSNAVPTDEHARIIDVS 600

Query: 441 P 442
           P
Sbjct: 601 P 601

[Close]

BLAST of IVF0002954 vs. ExPASy TrEMBL
Match: A0A5D3BJQ9 (RecQ-mediated genome instability protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00390 PE=3 SV=1)

HSP 1 Score: 790.8 bits (2041), Expect = 2.9e-225
Identity = 415/417 (99.52%), Postives = 416/417 (99.76%), Query Frame = 0


Query: 21  VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI 80
           VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI
Sbjct: 181 VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI 240

Query: 81  SDVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVPSLASRAT 140
           SDVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVPSLASRAT
Sbjct: 241 SDVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVPSLASRAT 300

Query: 141 HAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAFSAPVADAFTTPVSRTNANSE 200
           HAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAFSAPVADAFTTPVSRTNANSE
Sbjct: 301 HAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAFSAPVADAFTTPVSRTNANSE 360

Query: 201 LSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVNSVDDTNTVNSVNDSNAVNSV 260
           LSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVNSVDDTNTVNSVNDSNAVNSV
Sbjct: 361 LSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVNSVDDTNTVNSVNDSNAVNSV 420

Query: 261 EDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKCPSVRGRIKCFLTGVKGFQFKQ 320
           EDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKCPSVRGRIKCFLTGVKGFQFKQ
Sbjct: 421 EDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKCPSVRGRIKCFLTGVKGFQFKQ 480

Query: 321 RTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDAMDSSDVKVVSAMKETLRQFQ 380
           RTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDAMDSSDVKVVSAMKETLRQFQ
Sbjct: 481 RTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDAMDSSDVKVVSAMKETLRQFQ 540

Query: 381 IFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLRRLACSNAVPTDEHARII 438
           IFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLRRLACSNAVPTDEHAR +
Sbjct: 541 IFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLRRLACSNAVPTDEHARYL 597

[Close]

BLAST of IVF0002954 vs. ExPASy TrEMBL
Match: A0A5A7URI1 (RecQ-mediated genome instability protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00400 PE=3 SV=1)

HSP 1 Score: 782.3 bits (2019), Expect = 1.0e-222
Identity = 412/417 (98.80%), Postives = 413/417 (99.04%), Query Frame = 0


Query: 21  VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI 80
           VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI
Sbjct: 181 VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI 240

Query: 81  SDVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVPSLASRAT 140
           SDVSVRRGLLMLVPEAFEVLGG VEELEAARKRLVDEVNKPPRGRRTRTGVVPSLASRAT
Sbjct: 241 SDVSVRRGLLMLVPEAFEVLGGQVEELEAARKRLVDEVNKPPRGRRTRTGVVPSLASRAT 300

Query: 141 HAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAFSAPVADAFTTPVSRTNANSE 200
           HAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAFSAPVADAFTTPVSRTNANSE
Sbjct: 301 HAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAFSAPVADAFTTPVSRTNANSE 360

Query: 201 LSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVNSVDDTNTVNSVNDSNAVNSV 260
           LSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVNSVDDTN VNSVNDSNAVNSV
Sbjct: 361 LSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVNSVDDTNMVNSVNDSNAVNSV 420

Query: 261 EDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKCPSVRGRIKCFLTGVKGFQFKQ 320
           EDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEK PSVRGRIKCFLTGVKGFQFKQ
Sbjct: 421 EDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKSPSVRGRIKCFLTGVKGFQFKQ 480

Query: 321 RTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDAMDSSDVKVVSAMKETLRQFQ 380
           RTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDAMDSSDVKVVSAMKETLRQFQ
Sbjct: 481 RTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDAMDSSDVKVVSAMKETLRQFQ 540

Query: 381 IFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLRRLACSNAVPTDEHARII 438
           IFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLRRLACSNAVPTDEHAR +
Sbjct: 541 IFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLRRLACSNAVPTDEHARYL 597

[Close]

BLAST of IVF0002954 vs. ExPASy TrEMBL
Match: A0A0A0LNV2 (RecQ-mediated genome instability protein 1 OS=Cucumis sativus OX=3659 GN=Csa_1G001400 PE=3 SV=1)

HSP 1 Score: 747.3 bits (1928), Expect = 3.7e-212
Identity = 391/421 (92.87%), Postives = 408/421 (96.91%), Query Frame = 0


Query: 21  VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI 80
           VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQR+FGMEYRPIK+LEVLAPAGLKVVI
Sbjct: 181 VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRIFGMEYRPIKNLEVLAPAGLKVVI 240

Query: 81  SDVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVPSLASRAT 140
           S+VSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRG RTRTGVVPSLASRAT
Sbjct: 241 SNVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGSRTRTGVVPSLASRAT 300

Query: 141 HAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAFSAPVADAFTTPVSRTNANSE 200
            AAWPSDNVQEPGH SRMVDAEPS S+QGAR+FHRGNEAF+APVADAFTTPVSRTNANSE
Sbjct: 301 RAAWPSDNVQEPGHPSRMVDAEPSHSNQGARMFHRGNEAFTAPVADAFTTPVSRTNANSE 360

Query: 201 LSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVNSVDDTNTVNSVNDSNAVNSV 260
           LSSNFVSNVEEI SHSIPSGRA  EPTIVPNSVED+SVVNSVD+TN  NSV+DSNAVNSV
Sbjct: 361 LSSNFVSNVEEIHSHSIPSGRAHTEPTIVPNSVEDSSVVNSVDNTNMGNSVDDSNAVNSV 420

Query: 261 EDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKCPSVRGRIKCFLTGVKGFQFKQ 320
           EDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAK+K P VRGRIKCFLTGVKGFQFK+
Sbjct: 421 EDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKDKSPLVRGRIKCFLTGVKGFQFKR 480

Query: 321 RTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDAMDSSDVKVVSAMKETLRQFQ 380
           RT YELRV+VDDGSLISEVLID+EVVQKAIGHSPKDVTDA+DSSDVKVVSAMKETLRQFQ
Sbjct: 481 RTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTDAIDSSDVKVVSAMKETLRQFQ 540

Query: 381 IFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLRRLACSNAVPTDEHARIIDVS 440
           IFLINFEGTMLVEMN+TS LPVVLEM+EGCLESDARLLLRRLACSN+VPTDEHARIIDVS
Sbjct: 541 IFLINFEGTMLVEMNRTSLLPVVLEMSEGCLESDARLLLRRLACSNSVPTDEHARIIDVS 600

Query: 441 P 442
           P
Sbjct: 601 P 601

[Close]

BLAST of IVF0002954 vs. NCBI nr
Match: XP_008464407.1 (PREDICTED: recQ-mediated genome instability protein 1 isoform X2 [Cucumis melo])

HSP 1 Score: 832 bits (2148), Expect = 3.19e-303
Identity = 441/441 (100.00%), Postives = 441/441 (100.00%), Query Frame = 0


Query: 1   MRVLVSCLKMLILCISLISLVDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGM 60
           MRVLVSCLKMLILCISLISLVDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGM
Sbjct: 1   MRVLVSCLKMLILCISLISLVDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGM 60

Query: 61  EYRPIKDLEVLAPAGLKVVISDVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNK 120
           EYRPIKDLEVLAPAGLKVVISDVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNK
Sbjct: 61  EYRPIKDLEVLAPAGLKVVISDVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNK 120

Query: 121 PPRGRRTRTGVVPSLASRATHAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAF 180
           PPRGRRTRTGVVPSLASRATHAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAF
Sbjct: 121 PPRGRRTRTGVVPSLASRATHAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAF 180

Query: 181 SAPVADAFTTPVSRTNANSELSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVN 240
           SAPVADAFTTPVSRTNANSELSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVN
Sbjct: 181 SAPVADAFTTPVSRTNANSELSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVN 240

Query: 241 SVDDTNTVNSVNDSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKCP 300
           SVDDTNTVNSVNDSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKCP
Sbjct: 241 SVDDTNTVNSVNDSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKCP 300

Query: 301 SVRGRIKCFLTGVKGFQFKQRTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDA 360
           SVRGRIKCFLTGVKGFQFKQRTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDA
Sbjct: 301 SVRGRIKCFLTGVKGFQFKQRTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDA 360

Query: 361 MDSSDVKVVSAMKETLRQFQIFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLR 420
           MDSSDVKVVSAMKETLRQFQIFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLR
Sbjct: 361 MDSSDVKVVSAMKETLRQFQIFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLR 420

Query: 421 RLACSNAVPTDEHARIIDVSP 441
           RLACSNAVPTDEHARIIDVSP
Sbjct: 421 RLACSNAVPTDEHARIIDVSP 441

[Close]

BLAST of IVF0002954 vs. NCBI nr
Match: XP_008464406.1 (PREDICTED: recQ-mediated genome instability protein 1 isoform X1 [Cucumis melo])

HSP 1 Score: 801 bits (2070), Expect = 9.33e-289
Identity = 421/421 (100.00%), Postives = 421/421 (100.00%), Query Frame = 0


Query: 21  VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI 80
           VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI
Sbjct: 181 VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI 240

Query: 81  SDVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVPSLASRAT 140
           SDVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVPSLASRAT
Sbjct: 241 SDVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVPSLASRAT 300

Query: 141 HAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAFSAPVADAFTTPVSRTNANSE 200
           HAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAFSAPVADAFTTPVSRTNANSE
Sbjct: 301 HAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAFSAPVADAFTTPVSRTNANSE 360

Query: 201 LSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVNSVDDTNTVNSVNDSNAVNSV 260
           LSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVNSVDDTNTVNSVNDSNAVNSV
Sbjct: 361 LSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVNSVDDTNTVNSVNDSNAVNSV 420

Query: 261 EDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKCPSVRGRIKCFLTGVKGFQFKQ 320
           EDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKCPSVRGRIKCFLTGVKGFQFKQ
Sbjct: 421 EDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKCPSVRGRIKCFLTGVKGFQFKQ 480

Query: 321 RTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDAMDSSDVKVVSAMKETLRQFQ 380
           RTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDAMDSSDVKVVSAMKETLRQFQ
Sbjct: 481 RTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDAMDSSDVKVVSAMKETLRQFQ 540

Query: 381 IFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLRRLACSNAVPTDEHARIIDVS 440
           IFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLRRLACSNAVPTDEHARIIDVS
Sbjct: 541 IFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLRRLACSNAVPTDEHARIIDVS 600

[Close]

BLAST of IVF0002954 vs. NCBI nr
Match: TYJ98438.1 (recQ-mediated genome instability protein 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 791 bits (2042), Expect = 8.37e-284
Identity = 415/417 (99.52%), Postives = 416/417 (99.76%), Query Frame = 0


Query: 21  VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI 80
           VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI
Sbjct: 181 VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI 240

Query: 81  SDVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVPSLASRAT 140
           SDVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVPSLASRAT
Sbjct: 241 SDVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVPSLASRAT 300

Query: 141 HAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAFSAPVADAFTTPVSRTNANSE 200
           HAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAFSAPVADAFTTPVSRTNANSE
Sbjct: 301 HAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAFSAPVADAFTTPVSRTNANSE 360

Query: 201 LSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVNSVDDTNTVNSVNDSNAVNSV 260
           LSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVNSVDDTNTVNSVNDSNAVNSV
Sbjct: 361 LSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVNSVDDTNTVNSVNDSNAVNSV 420

Query: 261 EDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKCPSVRGRIKCFLTGVKGFQFKQ 320
           EDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKCPSVRGRIKCFLTGVKGFQFKQ
Sbjct: 421 EDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKCPSVRGRIKCFLTGVKGFQFKQ 480

Query: 321 RTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDAMDSSDVKVVSAMKETLRQFQ 380
           RTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDAMDSSDVKVVSAMKETLRQFQ
Sbjct: 481 RTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDAMDSSDVKVVSAMKETLRQFQ 540

Query: 381 IFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLRRLACSNAVPTDEHARII 437
           IFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLRRLACSNAVPTDEHAR +
Sbjct: 541 IFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLRRLACSNAVPTDEHARYL 597

[Close]

BLAST of IVF0002954 vs. NCBI nr
Match: KAA0057758.1 (recQ-mediated genome instability protein 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 782 bits (2020), Expect = 1.86e-280
Identity = 412/417 (98.80%), Postives = 413/417 (99.04%), Query Frame = 0


Query: 21  VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI 80
           VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI
Sbjct: 181 VDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRPIKDLEVLAPAGLKVVI 240

Query: 81  SDVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRGRRTRTGVVPSLASRAT 140
           SDVSVRRGLLMLVPEAFEVLGG VEELEAARKRLVDEVNKPPRGRRTRTGVVPSLASRAT
Sbjct: 241 SDVSVRRGLLMLVPEAFEVLGGQVEELEAARKRLVDEVNKPPRGRRTRTGVVPSLASRAT 300

Query: 141 HAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAFSAPVADAFTTPVSRTNANSE 200
           HAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAFSAPVADAFTTPVSRTNANSE
Sbjct: 301 HAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAFSAPVADAFTTPVSRTNANSE 360

Query: 201 LSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVNSVDDTNTVNSVNDSNAVNSV 260
           LSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVNSVDDTN VNSVNDSNAVNSV
Sbjct: 361 LSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVNSVDDTNMVNSVNDSNAVNSV 420

Query: 261 EDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKCPSVRGRIKCFLTGVKGFQFKQ 320
           EDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEK PSVRGRIKCFLTGVKGFQFKQ
Sbjct: 421 EDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKSPSVRGRIKCFLTGVKGFQFKQ 480

Query: 321 RTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDAMDSSDVKVVSAMKETLRQFQ 380
           RTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDAMDSSDVKVVSAMKETLRQFQ
Sbjct: 481 RTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDAMDSSDVKVVSAMKETLRQFQ 540

Query: 381 IFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLRRLACSNAVPTDEHARII 437
           IFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLRRLACSNAVPTDEHAR +
Sbjct: 541 IFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLRRLACSNAVPTDEHARYL 597

[Close]

BLAST of IVF0002954 vs. NCBI nr
Match: XP_011650728.1 (recQ-mediated genome instability protein 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 772 bits (1994), Expect = 9.28e-280
Identity = 409/441 (92.74%), Postives = 426/441 (96.60%), Query Frame = 0


Query: 1   MRVLVSCLKMLILCISLISLVDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGM 60
           M VLVSCLKMLILCISL SLVDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQR+FGM
Sbjct: 1   MWVLVSCLKMLILCISLTSLVDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRIFGM 60

Query: 61  EYRPIKDLEVLAPAGLKVVISDVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNK 120
           EYRPIK+LEVLAPAGLKVVIS+VSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNK
Sbjct: 61  EYRPIKNLEVLAPAGLKVVISNVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNK 120

Query: 121 PPRGRRTRTGVVPSLASRATHAAWPSDNVQEPGHSSRMVDAEPSRSDQGARLFHRGNEAF 180
           PPRG RTRTGVVPSLASRAT AAWPSDNVQEPGH SRMVDAEPS S+QGAR+FHRGNEAF
Sbjct: 121 PPRGSRTRTGVVPSLASRATRAAWPSDNVQEPGHPSRMVDAEPSHSNQGARMFHRGNEAF 180

Query: 181 SAPVADAFTTPVSRTNANSELSSNFVSNVEEIRSHSIPSGRASAEPTIVPNSVEDTSVVN 240
           +APVADAFTTPVSRTNANSELSSNFVSNVEEI SHSIPSGRA  EPTIVPNSVED+SVVN
Sbjct: 181 TAPVADAFTTPVSRTNANSELSSNFVSNVEEIHSHSIPSGRAHTEPTIVPNSVEDSSVVN 240

Query: 241 SVDDTNTVNSVNDSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKCP 300
           SVD+TN  NSV+DSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAK+K P
Sbjct: 241 SVDNTNMGNSVDDSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKDKSP 300

Query: 301 SVRGRIKCFLTGVKGFQFKQRTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDA 360
            VRGRIKCFLTGVKGFQFK+RT YELRV+VDDGSLISEVLID+EVVQKAIGHSPKDVTDA
Sbjct: 301 LVRGRIKCFLTGVKGFQFKRRTNYELRVYVDDGSLISEVLIDHEVVQKAIGHSPKDVTDA 360

Query: 361 MDSSDVKVVSAMKETLRQFQIFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLR 420
           +DSSDVKVVSAMKETLRQFQIFLINFEGTMLVEMN+TS LPVVLEM+EGCLESDARLLLR
Sbjct: 361 IDSSDVKVVSAMKETLRQFQIFLINFEGTMLVEMNRTSLLPVVLEMSEGCLESDARLLLR 420

Query: 421 RLACSNAVPTDEHARIIDVSP 441
           RLACSN+VPTDEHARIIDVSP
Sbjct: 421 RLACSNSVPTDEHARIIDVSP 441

[Close]

BLAST of IVF0002954 vs. TAIR 10
Match: AT5G63540.1 (Domain of unknown function (DUF1767) )

HSP 1 Score: 354.4 bits (908), Expect = 1.3e-97
Identity = 231/468 (49.36%), Postives = 295/468 (63.03%), Query Frame = 0


Query: 5   VSCLKMLILCISLISLVDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRP 64
           V+ +  + L    +  VDEIVNI C LKGRY+ A A +KRCLKLSMTDGVQRVFGMEYRP
Sbjct: 163 VASMNRIELAGPFVLQVDEIVNIGCPLKGRYENANAGLKRCLKLSMTDGVQRVFGMEYRP 222

Query: 65  IKDLEVLAPAGLKVVISDVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRG 124
           IKDL+VLAPAGLK+V+S V VR GLLMLVPE  EVLGG+VEELE ARKRLV EVNKPPRG
Sbjct: 223 IKDLQVLAPAGLKIVVSSVQVRHGLLMLVPEIVEVLGGMVEELEEARKRLVVEVNKPPRG 282

Query: 125 RRTRTGVVPSLASRATHAAW------PSDNVQEPG---HSSRMVDAEPSRSDQGARLF-- 184
           +RTR GVVPSL +RAT AAW        ++V + G   +SS   +A  ++++QG  +   
Sbjct: 283 KRTRVGVVPSLTTRATLAAWSLNGNDTGNHVHDTGNHVNSSASGNASHTQANQGIPVHVT 342

Query: 185 --HRGNEAFSAPVADA-FTTPVSR--------TNANSELSSNFV----SNVEEIRS---- 244
             H  + A   P+A       VSR         +A+ E + + +    SN+    S    
Sbjct: 343 RTHNSSRAMDEPLASTNVGATVSRVEHMQIDTASAHGERTFSDIHSTSSNIHRAASTAGT 402

Query: 245 ----HSIPSGRASAEPTIVPNSVEDTSVVNS-----------VDDTNTVNSVNDSNAVNS 304
                   SG  S    +  NS++ TS V S           V DT T    +DS  V +
Sbjct: 403 GTSCSGACSGARSFANNVGGNSLDQTSNVTSFVEEMHIDTGRVRDTTTHIYGSDSGGVAA 462

Query: 305 VEDTIMVDIEHPLILSGDREIPFTYLASLSAKLAAAKEKCPSVRGRIKCFLTGVKGFQFK 364
               ++VD+E P +LS + E PFTYLA LS K A  K+    V+GRIKCFLTGVK FQFK
Sbjct: 463 EFSNMVVDLEGPSVLSTNTEKPFTYLAELSQKWAVMKDTIHFVQGRIKCFLTGVKKFQFK 522

Query: 365 QRTRYELRVFVDDGSLISEVLIDNEVVQKAIGHSPKDVTDAMDSSDVKVVSA-MKETLRQ 424
           Q++ YEL  +VDDGSLI E+L+ N+VVQK IGHS  +VT A+ SS    ++A MKE L++
Sbjct: 523 QQSTYELLCYVDDGSLICEILLHNDVVQKRIGHSSMEVTAALSSSAPTSLNAMMKEKLKR 582

Query: 425 FQIFLINFEGTMLVEMNKTSSLPVVLEMAEGCLESDARLLLRRLACSN 427
           FQ+FL +FEG M+VEMN++S  PV +EM +GC  +DARLLL R+  S+
Sbjct: 583 FQLFLADFEGIMVVEMNRSSQYPVAIEMNQGCSLTDARLLLDRIKSSS 630

[Close]

BLAST of IVF0002954 vs. TAIR 10
Match: AT5G63540.2 (Domain of unknown function (DUF1767) )

HSP 1 Score: 335.1 bits (858), Expect = 8.5e-92
Identity = 230/501 (45.91%), Postives = 294/501 (58.68%), Query Frame = 0


Query: 5   VSCLKMLILCISLISLVDEIVNISCALKGRYQTAPANIKRCLKLSMTDGVQRVFGMEYRP 64
           V+ +  + L    +  VDEIVNI C LKGRY+ A A +KRCLKLSMTDGVQRVFGMEYRP
Sbjct: 163 VASMNRIELAGPFVLQVDEIVNIGCPLKGRYENANAGLKRCLKLSMTDGVQRVFGMEYRP 222

Query: 65  IKDLEVLAPAGLKVVISDVSVRRGLLMLVPEAFEVLGGLVEELEAARKRLVDEVNKPPRG 124
           IKDL+VLAPAGLK+V+S V VR GLLMLVPE  EVLGG+VEELE ARKRLV EVNKPPRG
Sbjct: 223 IKDLQVLAPAGLKIVVSSVQVRHGLLMLVPEIVEVLGGMVEELEEARKRLVVEVNKPPRG 282

Query: 125 RR---------------------------------TRTGVVPSLASRATHAAW------P 184
           +                                  TR GVVPSL +RAT AAW       
Sbjct: 283 KSWKDYLQPVCFTDFFGYSFFDLENRDWFGVCLTITRVGVVPSLTTRATLAAWSLNGNDT 342

Query: 185 SDNVQEPG---HSSRMVDAEPSRSDQGARLF----HRGNEAFSAPVADA-FTTPVSR--- 244
            ++V + G   +SS   +A  ++++QG  +     H  + A   P+A       VSR   
Sbjct: 343 GNHVHDTGNHVNSSASGNASHTQANQGIPVHVTRTHNSSRAMDEPLASTNVGATVSRVEH 402

Query: 245 -----TNANSELSSNFV----SNVEEIRS--------HSIPSGRASAEPTIVPNSVEDTS 304
                 +A+ E + + +    SN+    S            SG  S    +  NS++ TS
Sbjct: 403 MQIDTASAHGERTFSDIHSTSSNIHRAASTAGTGTSCSGACSGARSFANNVGGNSLDQTS 462

Query: 305 VVNS-----------VDDTNTVNSVNDSNAVNSVEDTIMVDIEHPLILSGDREIPFTYLA 364
            V S           V DT T    +DS  V +    ++VD+E P +LS + E PFTYLA
Sbjct: 463 NVTSFVEEMHIDTGRVRDTTTHIYGSDSGGVAAEFSNMVVDLEGPSVLSTNTEKPFTYLA 522

Query: 365 SLSAKLAAAKEKCPSVRGRIKCFLTGVKGFQFKQRTRYELRVFVDDGSLISEVLIDNEVV 424
            LS K A  K+    V+GRIKCFLTGVK FQFKQ++ YEL  +VDDGSLI E+L+ N+VV
Sbjct: 523 ELSQKWAVMKDTIHFVQGRIKCFLTGVKKFQFKQQSTYELLCYVDDGSLICEILLHNDVV 582

Query: 425 QKAIGHSPKDVTDAMDSSDVKVVSA-MKETLRQFQIFLINFEGTMLVEMNKTSSLPVVLE 427
           QK IGHS  +VT A+ SS    ++A MKE L++FQ+FL +FEG M+VEMN++S  PV +E
Sbjct: 583 QKRIGHSSMEVTAALSSSAPTSLNAMMKEKLKRFQLFLADFEGIMVVEMNRSSQYPVAIE 642

The following BLAST results are available for this feature:

BLAST of IVF0002954 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5XUX6	1.9e-96	49.36	RecQ-mediated genome instability protein 1 OS=Arabidopsis thaliana OX=3702 GN=RM...	[more]
Q7XRV0	3.2e-67	35.31	RecQ-mediated genome instability protein 1 OS=Oryza sativa subsp. japonica OX=39...	[more]
Q7ZVM9	1.3e-07	49.23	RecQ-mediated genome instability protein 1 OS=Danio rerio OX=7955 GN=rmi1 PE=2 S...	[more]
Q5ZHV8	4.8e-07	33.93	RecQ-mediated genome instability protein 1 OS=Gallus gallus OX=9031 GN=RMI1 PE=2...	[more]
Q9H9A7	8.2e-07	44.93	RecQ-mediated genome instability protein 1 OS=Homo sapiens OX=9606 GN=RMI1 PE=1 ...	[more]

BLAST of IVF0002954 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CLE1	1.5e-237	100.00	recQ-mediated genome instability protein 1 isoform X2 OS=Cucumis melo OX=3656 GN...	[more]
A0A1S3CLI7	1.7e-228	100.00	RecQ-mediated genome instability protein 1 OS=Cucumis melo OX=3656 GN=LOC1035023...	[more]
A0A5D3BJQ9	2.9e-225	99.52	RecQ-mediated genome instability protein 1 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A5A7URI1	1.0e-222	98.80	RecQ-mediated genome instability protein 1 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A0A0LNV2	3.7e-212	92.87	RecQ-mediated genome instability protein 1 OS=Cucumis sativus OX=3659 GN=Csa_1G0...	[more]

BLAST of IVF0002954 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464407.1	3.19e-303	100.00	PREDICTED: recQ-mediated genome instability protein 1 isoform X2 [Cucumis melo]	[more]
XP_008464406.1	9.33e-289	100.00	PREDICTED: recQ-mediated genome instability protein 1 isoform X1 [Cucumis melo]	[more]
TYJ98438.1	8.37e-284	99.52	recQ-mediated genome instability protein 1 isoform X1 [Cucumis melo var. makuwa]	[more]
KAA0057758.1	1.86e-280	98.80	recQ-mediated genome instability protein 1 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_011650728.1	9.28e-280	92.74	recQ-mediated genome instability protein 1 isoform X2 [Cucumis sativus]	[more]

BLAST of IVF0002954 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G63540.1	1.3e-97	49.36	Domain of unknown function (DUF1767)	[more]
AT5G63540.2	8.5e-92	45.91	Domain of unknown function (DUF1767)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032199	Recq-mediated genome instability protein 1, C-terminal OB-fold domain	PFAM	PF16099	RMI1_C	coord: 281..422 e-value: 3.8E-36 score: 124.1
IPR013894	RecQ mediated genome instability protein, N-terminal	PFAM	PF08585	RMI1_N	coord: 38..113 e-value: 1.8E-23 score: 83.5
IPR042470	RecQ mediated genome instability protein, N-terminal, subdomain 2	GENE3D	2.40.50.770		coord: 17..117 e-value: 1.3E-20 score: 75.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..163
None	No IPR available	PANTHER	PTHR14790:SF15	RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1	coord: 21..426
IPR039215	RecQ-mediated genome instability protein 1	PANTHER	PTHR14790	RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 RMI1	coord: 21..426

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0002954.1	IVF0002954.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000724	double-strand break repair via homologous recombination
biological_process	GO:0000712	resolution of meiotic recombination intermediates
cellular_component	GO:0016604	nuclear body
cellular_component	GO:0031422	RecQ family helicase-topoisomerase III complex
molecular_function	GO:0000166	nucleotide binding