IVF0002888 (gene) Melon (IVF77) v1

Overview


Name	IVF0002888
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Transcription termination factor MTERF8
Location	chr12: 18900549 .. 18902205 (+)
RNA-Seq Expression	IVF0002888
Synteny	IVF0002888

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTTTTCAAAACAGCCCGATTTGAACCCTAAGAAAACAGAACCCCAATGGTCACAAGTAGCAGCCGCCAATCGGCAATTACATACCCACCGAAACCTCTTCTTTCCCTTTCCAATGGCCATTCTCTCCTCAAACCTTCTCTACTACGCCTCTTTGCTCAAGACCTCCAAAATTTCACGCACAACAACACCACGATTGGCCTCAAACTCCTTTCTTCTCTCTCTCAAACCCCTCAATCAACCAACGATCGGACACTCGATTACCTCGTCCACACCATCGGCCTCCCCAAGGATTCAGCTCTAGCCGCTGCCAAGAAAACCCGTCTCAAACCAACCGCAGATCCCGACTCTGTTCTTGCACTCTTTAACGCCTATGGATTCACACCTTCCCACATTGCCAGCATCTTTAGCAAACAATCCCGCCTCCTTCTTGCCAATCCGGACACAACACTCAAGCCCAAGTTGGAGTTTCTCTCCAAAAATGGCATATCTGGTAACTTACTCGTCAACGTAATCTGTAGGGACCCATATATTCTTTCTAGGAGCCTGGACAAGCAGATTGTTCCATGTATTGATTTTCTCAGAAATTTCTTTGGGTCTACTGATGGCGTTGTTTTGCTTTTTTCTGCTGGAGGTGGGACTCGGGTTTTGGAAACTTTTTCTGAATCTATGGCTCCTAATATTGAAGTACTGAGAGCTAACGGTGTGCTCGATTCAAACATTGCTAAAATGCTTTCTTTGCGCCCGATTGCACTCTCCAGGGATGTGGAAAACTTTATTGACATTGTCGAGAAGGCAAAGGAAATAGGGTTAAATCCTTCGAGTTTGATGTTTATTCATGGGCTGTGTATGATTTCATCGATGAGTAAGGACAAATGGTTATCGAAAGTGCATCTTTTTAAAAGTTTTGGGTGGTCAGATGAGCAGTTTCAATCTATGTTTCTCAAGCAGCCTTTTTTCATGAAACGGTCCGAGGAGCATTTAAAGAGGATGTTGGATTTCTTTATGAACAAATGGGACTGGACACGGGAAGATATTTCCAAGTACGCAGTTTTGCTAAATCTTAGTCTTGAAAAGAGGGTGATACCGAGGTCGTCTATCGTTCGGCACCTGATATCAAAAGGTTTTATCAAGAGGAAGAGTTTTGGCATAGCATTGCAAAGACCCGAGCATGAGTTCTTGGAGAAGTTTGTGATGAAGTATCTTTCAAAAGATCCCCATCTATTAGAGATGTACCAGGAGAAGAAGAAGATGGCGATATAATGAAAACTCTCCTCTTCACTTCGGGTAATTTGTCTATTCTGCTACCAACTCTGCACTTCACTCTGTGAGAGAGAGACTGTAGGTTTATGTGCAAAACTTGTGAGATTTCACAGATCTTAGAACTGGGATTTGATAACCGACATATGATAGTTATAGCATTTTGATCTTTTAGGAATTTACCAAATTGCATGAGACTGTGACAAGAGAAGTAACTAATTATGATGCTTAATTTTAAAGATTGGTATTCTTAGGGATTATCATTGATGATTGGGAGTTCCTCTTCCATAAACTAAGAGAAGTAGTTTGTATCTCTTGTTTTGTTTGGGTTTTTCTCGCTCCCTTTTGGTAGATTATTGTATCTTGAAGAATTTATTCATTTTTATAAATCAGCAAAAG

mRNA sequence

AGTTTTCAAAACAGCCCGATTTGAACCCTAAGAAAACAGAACCCCAATGGTCACAAGTAGCAGCCGCCAATCGGCAATTACATACCCACCGAAACCTCTTCTTTCCCTTTCCAATGGCCATTCTCTCCTCAAACCTTCTCTACTACGCCTCTTTGCTCAAGACCTCCAAAATTTCACGCACAACAACACCACGATTGGCCTCAAACTCCTTTCTTCTCTCTCTCAAACCCCTCAATCAACCAACGATCGGACACTCGATTACCTCGTCCACACCATCGGCCTCCCCAAGGATTCAGCTCTAGCCGCTGCCAAGAAAACCCGTCTCAAACCAACCGCAGATCCCGACTCTGTTCTTGCACTCTTTAACGCCTATGGATTCACACCTTCCCACATTGCCAGCATCTTTAGCAAACAATCCCGCCTCCTTCTTGCCAATCCGGACACAACACTCAAGCCCAAGTTGGAGTTTCTCTCCAAAAATGGCATATCTGGTAACTTACTCGTCAACGTAATCTGTAGGGACCCATATATTCTTTCTAGGAGCCTGGACAAGCAGATTGTTCCATGTATTGATTTTCTCAGAAATTTCTTTGGGTCTACTGATGGCGTTGTTTTGCTTTTTTCTGCTGGAGGTGGGACTCGGGTTTTGGAAACTTTTTCTGAATCTATGGCTCCTAATATTGAAGTACTGAGAGCTAACGGTGTGCTCGATTCAAACATTGCTAAAATGCTTTCTTTGCGCCCGATTGCACTCTCCAGGGATGTGGAAAACTTTATTGACATTGTCGAGAAGGCAAAGGAAATAGGGTTAAATCCTTCGAGTTTGATGTTTATTCATGGGCTGTGTATGATTTCATCGATGAGTAAGGACAAATGGTTATCGAAAGTGCATCTTTTTAAAAGTTTTGGGTGGTCAGATGAGCAGTTTCAATCTATGTTTCTCAAGCAGCCTTTTTTCATGAAACGGTCCGAGGAGCATTTAAAGAGGATGTTGGATTTCTTTATGAACAAATGGGACTGGACACGGGAAGATATTTCCAAGTACGCAGTTTTGCTAAATCTTAGTCTTGAAAAGAGGGTGATACCGAGGTCGTCTATCGTTCGGCACCTGATATCAAAAGGTTTTATCAAGAGGAAGAGTTTTGGCATAGCATTGCAAAGACCCGAGCATGAGTTCTTGGAGAAGTTTGTGATGAAGTATCTTTCAAAAGATCCCCATCTATTAGAGATGTACCAGGAGAAGAAGAAGATGGCGATATAATGAAAACTCTCCTCTTCACTTCGGGTAATTTGTCTATTCTGCTACCAACTCTGCACTTCACTCTGTGAGAGAGAGACTGTAGGTTTATGTGCAAAACTTGTGAGATTTCACAGATCTTAGAACTGGGATTTGATAACCGACATATGATAGTTATAGCATTTTGATCTTTTAGGAATTTACCAAATTGCATGAGACTGTGACAAGAGAAGTAACTAATTATGATGCTTAATTTTAAAGATTGGTATTCTTAGGGATTATCATTGATGATTGGGAGTTCCTCTTCCATAAACTAAGAGAAGTAGTTTGTATCTCTTGTTTTGTTTGGGTTTTTCTCGCTCCCTTTTGGTAGATTATTGTATCTTGAAGAATTTATTCATTTTTATAAATCAGCAAAAG

Coding sequence (CDS)

ATGGTCACAAGTAGCAGCCGCCAATCGGCAATTACATACCCACCGAAACCTCTTCTTTCCCTTTCCAATGGCCATTCTCTCCTCAAACCTTCTCTACTACGCCTCTTTGCTCAAGACCTCCAAAATTTCACGCACAACAACACCACGATTGGCCTCAAACTCCTTTCTTCTCTCTCTCAAACCCCTCAATCAACCAACGATCGGACACTCGATTACCTCGTCCACACCATCGGCCTCCCCAAGGATTCAGCTCTAGCCGCTGCCAAGAAAACCCGTCTCAAACCAACCGCAGATCCCGACTCTGTTCTTGCACTCTTTAACGCCTATGGATTCACACCTTCCCACATTGCCAGCATCTTTAGCAAACAATCCCGCCTCCTTCTTGCCAATCCGGACACAACACTCAAGCCCAAGTTGGAGTTTCTCTCCAAAAATGGCATATCTGGTAACTTACTCGTCAACGTAATCTGTAGGGACCCATATATTCTTTCTAGGAGCCTGGACAAGCAGATTGTTCCATGTATTGATTTTCTCAGAAATTTCTTTGGGTCTACTGATGGCGTTGTTTTGCTTTTTTCTGCTGGAGGTGGGACTCGGGTTTTGGAAACTTTTTCTGAATCTATGGCTCCTAATATTGAAGTACTGAGAGCTAACGGTGTGCTCGATTCAAACATTGCTAAAATGCTTTCTTTGCGCCCGATTGCACTCTCCAGGGATGTGGAAAACTTTATTGACATTGTCGAGAAGGCAAAGGAAATAGGGTTAAATCCTTCGAGTTTGATGTTTATTCATGGGCTGTGTATGATTTCATCGATGAGTAAGGACAAATGGTTATCGAAAGTGCATCTTTTTAAAAGTTTTGGGTGGTCAGATGAGCAGTTTCAATCTATGTTTCTCAAGCAGCCTTTTTTCATGAAACGGTCCGAGGAGCATTTAAAGAGGATGTTGGATTTCTTTATGAACAAATGGGACTGGACACGGGAAGATATTTCCAAGTACGCAGTTTTGCTAAATCTTAGTCTTGAAAAGAGGGTGATACCGAGGTCGTCTATCGTTCGGCACCTGATATCAAAAGGTTTTATCAAGAGGAAGAGTTTTGGCATAGCATTGCAAAGACCCGAGCATGAGTTCTTGGAGAAGTTTGTGATGAAGTATCTTTCAAAAGATCCCCATCTATTAGAGATGTACCAGGAGAAGAAGAAGATGGCGATATAA

Protein sequence

MVTSSSRQSAITYPPKPLLSLSNGHSLLKPSLLRLFAQDLQNFTHNNTTIGLKLLSSLSQTPQSTNDRTLDYLVHTIGLPKDSALAAAKKTRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSRLLLANPDTTLKPKLEFLSKNGISGNLLVNVICRDPYILSRSLDKQIVPCIDFLRNFFGSTDGVVLLFSAGGGTRVLETFSESMAPNIEVLRANGVLDSNIAKMLSLRPIALSRDVENFIDIVEKAKEIGLNPSSLMFIHGLCMISSMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNKWDWTREDISKYAVLLNLSLEKRVIPRSSIVRHLISKGFIKRKSFGIALQRPEHEFLEKFVMKYLSKDPHLLEMYQEKKKMAI

Homology

[Close]

BLAST of IVF0002888 vs. ExPASy Swiss-Prot
Match: Q9FK23 (Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF8 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 3.7e-06
Identity = 62/284 (21.83%), Postives = 117/284 (41.20%), Query Frame = 0


Query: 64  STNDRTLDYLVHTIGLPKDSALAAAKKTRLKPTADPDSVLALFNAYGF-TPSHIASIFSK 123
           S N +    L+H  G+PK+       K  L       SV  +     F  P     I ++
Sbjct: 180 SFNQKVRLLLLH--GIPKEKISHVLNKVYLNKLLYQKSVEDIERLISFLEPFGGIGIIAR 239

Query: 124 QSRLLLANPDTTLKPKLEFL-SKNGISGNLLVNVICRDPYILSRSLDKQIVPCIDFLRNF 183
           +  +L ++ D+ L P+++F+ + +G        V+ R P ILS S++  +   ++FL++F
Sbjct: 240 RPVILNSDLDSQLIPRVDFIRNLSGEDDFATGTVLRRLPAILSYSVE-HMNGQVEFLKSF 299

Query: 184 FGSTDGVVLLFSAGGGTRVLETFSESMAPNIEVLRANGVLDSNIAKMLSLRPIALSRDVE 243
            G T   V          +  +    + P IE L+  G     + K LS  P+ L+    
Sbjct: 300 AGLTSEQVFKIVHVFPNVISTSKERKLRPRIEFLKECGFDSPGMFKFLSKAPLILALSEN 359

Query: 244 NFIDIVEKAKEIGLNPSSLMFIHGLCMISSMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQ 303
           N    +    +IG    +      +  ++  S D     + L+ S+G S E   +M  K 
Sbjct: 360 NLSHKLGFLVKIGYKHRTKELAFAMGAVTRTSSDNMQRVIGLYLSYGLSFEDILAMSTKH 419

Query: 304 PFFMKRSEEHLKRMLDFFMNKWDWTREDISKYAVLLNLSLEKRV 346
           P  ++ +   L+  L++ +       E++  +   L   L+ R+
Sbjct: 420 PQVLQYNYTSLEEKLEYLIEYMGREVEELLAFPAFLGYKLDSRI 460

[Close]

BLAST of IVF0002888 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 9.2e-05
Identity = 59/296 (19.93%), Postives = 132/296 (44.59%), Query Frame = 0


Query: 88  AKKTRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSRLLLANPDTTLKPKLEFLSKNGI 147
           A++  + P   P  +L   + +G   SH   ++ +    L  N   + + +L++L   G+
Sbjct: 175 AEEIDIDPKCVP--LLDYLSTFGLKESHFVQMYERHMPSLQINV-FSAQERLDYLLSVGV 234

Query: 148 SGNLLVNVICRDPYILSRSLDKQIVPCIDFLRNFFGSTDGVVLLFSAGGGTRVLETFSES 207
               +  ++ R P IL  +++  +   I FL    G  +  +    A   +    +   S
Sbjct: 235 KHRDIKRMLLRQPQILQYTVENNLKAHISFLMG-LGIPNSKIGQIVAATPSLFSYSVENS 294

Query: 208 MAPNIE-VLRANGVLDSNIAKMLSLRPIALSR--DVENFIDIVEKAKEIGLNPSSLMFI- 267
           + P I  ++   G+ ++++ K++ L P  L +  D+      +  +KE+G    S++ + 
Sbjct: 295 LRPTIRYLIEEVGIKETDVGKVVQLSPQILVQRLDITWNTRYMFLSKELGAPRDSVVKMV 354

Query: 268 --HGLCMISSMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRS-EEHLKRMLDFFM 327
             H   +  S+  D +L +++  +S G  +     +       +  S E++LK    + +
Sbjct: 355 KKHPQLLHYSID-DGFLPRINFLRSIGMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYLV 414

Query: 328 NKWDWTREDISKYAVLLNLSLEKRVIPRSSIVRHLISKGFIKRKSFGIALQRPEHE 377
           N+ +     ++KY + L+LSL++R+ PR    R L+    +++  F ++   P  E
Sbjct: 415 NELNNEVHILTKYPMYLSLSLDQRIRPRH---RFLVELKKVRKGPFPLSSLVPNDE 462

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BLAST of IVF0002888 vs. ExPASy TrEMBL
Match: A0A5A7UKN0 (Transcription termination factor MTERF8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00090 PE=3 SV=1)

HSP 1 Score: 741.5 bits (1913), Expect = 1.9e-210
Identity = 379/380 (99.74%), Postives = 380/380 (100.00%), Query Frame = 0


Query: 25  HSLLKPSLLRLFAQDLQNFTHNNTTIGLKLLSSLSQTPQSTNDRTLDYLVHTIGLPKDSA 84
           +SLLKPSLLRLFAQDLQNFTHNNTTIGLKLLSSLSQTPQSTNDRTLDYLVHTIGLPKDSA
Sbjct: 3   NSLLKPSLLRLFAQDLQNFTHNNTTIGLKLLSSLSQTPQSTNDRTLDYLVHTIGLPKDSA 62

Query: 85  LAAAKKTRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSRLLLANPDTTLKPKLEFLSK 144
           LAAAKKTRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSRLLLANPDTTLKPKLEFLSK
Sbjct: 63  LAAAKKTRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSRLLLANPDTTLKPKLEFLSK 122

Query: 145 NGISGNLLVNVICRDPYILSRSLDKQIVPCIDFLRNFFGSTDGVVLLFSAGGGTRVLETF 204
           NGISGNLLVNVICRDPYILSRSLDKQIVPCIDFLRNFFGSTDGVVLLFSAGGGTRVLETF
Sbjct: 123 NGISGNLLVNVICRDPYILSRSLDKQIVPCIDFLRNFFGSTDGVVLLFSAGGGTRVLETF 182

Query: 205 SESMAPNIEVLRANGVLDSNIAKMLSLRPIALSRDVENFIDIVEKAKEIGLNPSSLMFIH 264
           SESMAPNIEVLRANGVLDSNIAKMLSLRPIALSRDVENFIDIVEKAKEIGLNPSSLMFIH
Sbjct: 183 SESMAPNIEVLRANGVLDSNIAKMLSLRPIALSRDVENFIDIVEKAKEIGLNPSSLMFIH 242

Query: 265 GLCMISSMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNKWD 324
           GLCMISSMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNKWD
Sbjct: 243 GLCMISSMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNKWD 302

Query: 325 WTREDISKYAVLLNLSLEKRVIPRSSIVRHLISKGFIKRKSFGIALQRPEHEFLEKFVMK 384
           WTREDISKYAVLLNLSLEKRVIPRSSIVRHLISKGFIKRKSFGIALQRPEHEFLEKFVMK
Sbjct: 303 WTREDISKYAVLLNLSLEKRVIPRSSIVRHLISKGFIKRKSFGIALQRPEHEFLEKFVMK 362

Query: 385 YLSKDPHLLEMYQEKKKMAI 405
           YLSKDPHLLEMYQEKKKMAI
Sbjct: 363 YLSKDPHLLEMYQEKKKMAI 382

[Close]

BLAST of IVF0002888 vs. ExPASy TrEMBL
Match: A0A1S3BCI2 (transcription termination factor MTERF8, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103488160 PE=3 SV=1)

HSP 1 Score: 741.5 bits (1913), Expect = 1.9e-210
Identity = 379/380 (99.74%), Postives = 380/380 (100.00%), Query Frame = 0


Query: 25  HSLLKPSLLRLFAQDLQNFTHNNTTIGLKLLSSLSQTPQSTNDRTLDYLVHTIGLPKDSA 84
           +SLLKPSLLRLFAQDLQNFTHNNTTIGLKLLSSLSQTPQSTNDRTLDYLVHTIGLPKDSA
Sbjct: 3   NSLLKPSLLRLFAQDLQNFTHNNTTIGLKLLSSLSQTPQSTNDRTLDYLVHTIGLPKDSA 62

Query: 85  LAAAKKTRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSRLLLANPDTTLKPKLEFLSK 144
           LAAAKKTRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSRLLLANPDTTLKPKLEFLSK
Sbjct: 63  LAAAKKTRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSRLLLANPDTTLKPKLEFLSK 122

Query: 145 NGISGNLLVNVICRDPYILSRSLDKQIVPCIDFLRNFFGSTDGVVLLFSAGGGTRVLETF 204
           NGISGNLLVNVICRDPYILSRSLDKQIVPCIDFLRNFFGSTDGVVLLFSAGGGTRVLETF
Sbjct: 123 NGISGNLLVNVICRDPYILSRSLDKQIVPCIDFLRNFFGSTDGVVLLFSAGGGTRVLETF 182

Query: 205 SESMAPNIEVLRANGVLDSNIAKMLSLRPIALSRDVENFIDIVEKAKEIGLNPSSLMFIH 264
           SESMAPNIEVLRANGVLDSNIAKMLSLRPIALSRDVENFIDIVEKAKEIGLNPSSLMFIH
Sbjct: 183 SESMAPNIEVLRANGVLDSNIAKMLSLRPIALSRDVENFIDIVEKAKEIGLNPSSLMFIH 242

Query: 265 GLCMISSMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNKWD 324
           GLCMISSMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNKWD
Sbjct: 243 GLCMISSMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNKWD 302

Query: 325 WTREDISKYAVLLNLSLEKRVIPRSSIVRHLISKGFIKRKSFGIALQRPEHEFLEKFVMK 384
           WTREDISKYAVLLNLSLEKRVIPRSSIVRHLISKGFIKRKSFGIALQRPEHEFLEKFVMK
Sbjct: 303 WTREDISKYAVLLNLSLEKRVIPRSSIVRHLISKGFIKRKSFGIALQRPEHEFLEKFVMK 362

Query: 385 YLSKDPHLLEMYQEKKKMAI 405
           YLSKDPHLLEMYQEKKKMAI
Sbjct: 363 YLSKDPHLLEMYQEKKKMAI 382

[Close]

BLAST of IVF0002888 vs. ExPASy TrEMBL
Match: A0A5A7V906 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001540 PE=3 SV=1)

HSP 1 Score: 679.5 bits (1752), Expect = 8.7e-192
Identity = 349/381 (91.60%), Postives = 364/381 (95.54%), Query Frame = 0


Query: 25  HSLLKPSLLRLFAQDLQNFTHNNTTIGLKLLSSLSQTPQSTNDRTLDYLVHTIGLPKDSA 84
           +SLLKPSLLR FAQDL+NFTHNNTTIGLK LSSLSQTPQSTNDRT DYLVHTIGLPKDSA
Sbjct: 3   NSLLKPSLLRPFAQDLRNFTHNNTTIGLKFLSSLSQTPQSTNDRTQDYLVHTIGLPKDSA 62

Query: 85  LAAAKKTRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSRLLLANPDTTLKPKLEFLSK 144
           LAAAKK RLKPTADPDSVLALFNAYGFTPSHIASIFSKQS LLLA+PDTTLKPK+EFLSK
Sbjct: 63  LAAAKKIRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSCLLLADPDTTLKPKIEFLSK 122

Query: 145 NGISGNLLVNVICRDPYILSRSLDKQIVPCIDFLRNFFGSTDGVVLLFSAGGGTRVLETF 204
           NGISGNLL +VICRDP+IL RSLDKQIVPCIDFL NFFGSTDGVVLLFSAGGGTRVLETF
Sbjct: 123 NGISGNLLADVICRDPHILHRSLDKQIVPCIDFLINFFGSTDGVVLLFSAGGGTRVLETF 182

Query: 205 SESMAPNIEVLRANGVLDSNIAKMLSLRPIALSRDVENFIDIVEKAKEIGLNPSSLMFIH 264
           SESMAPN+EVLRANGV DSNIAKMLSLRPIALS+DVE+FIDIVEK KE+GLNPSSLMFIH
Sbjct: 183 SESMAPNVEVLRANGVPDSNIAKMLSLRPIALSKDVEHFIDIVEKTKEMGLNPSSLMFIH 242

Query: 265 GLCMISSMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNKWD 324
           G+CMI+SMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNKWD
Sbjct: 243 GMCMIASMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNKWD 302

Query: 325 WTREDISKYAVLLNLSLEKRVIPRSSIVRHLISKGFIKRKSFGIALQRPEHEFLEKFVMK 384
           WT ED+SKY VLLNLSLEKRVIPRSSIV+ LISKGFIKRKSFG ALQRPE  FLEKFVMK
Sbjct: 303 WTLEDVSKYPVLLNLSLEKRVIPRSSIVQRLISKGFIKRKSFGKALQRPEQWFLEKFVMK 362

Query: 385 YLSKDPHLLEMYQE-KKKMAI 405
           YLS+DPHLLEMYQE KKKMAI
Sbjct: 363 YLSEDPHLLEMYQETKKKMAI 383

[Close]

BLAST of IVF0002888 vs. ExPASy TrEMBL
Match: A0A1S3BCE7 (transcription termination factor MTERF5, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103488393 PE=3 SV=1)

HSP 1 Score: 679.5 bits (1752), Expect = 8.7e-192
Identity = 349/381 (91.60%), Postives = 364/381 (95.54%), Query Frame = 0


Query: 25  HSLLKPSLLRLFAQDLQNFTHNNTTIGLKLLSSLSQTPQSTNDRTLDYLVHTIGLPKDSA 84
           +SLLKPSLLR FAQDL+NFTHNNTTIGLK LSSLSQTPQSTNDRT DYLVHTIGLPKDSA
Sbjct: 3   NSLLKPSLLRPFAQDLRNFTHNNTTIGLKFLSSLSQTPQSTNDRTQDYLVHTIGLPKDSA 62

Query: 85  LAAAKKTRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSRLLLANPDTTLKPKLEFLSK 144
           LAAAKK RLKPTADPDSVLALFNAYGFTPSHIASIFSKQS LLLA+PDTTLKPK+EFLSK
Sbjct: 63  LAAAKKIRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSCLLLADPDTTLKPKIEFLSK 122

Query: 145 NGISGNLLVNVICRDPYILSRSLDKQIVPCIDFLRNFFGSTDGVVLLFSAGGGTRVLETF 204
           NGISGNLL +VICRDP+IL RSLDKQIVPCIDFL NFFGSTDGVVLLFSAGGGTRVLETF
Sbjct: 123 NGISGNLLADVICRDPHILHRSLDKQIVPCIDFLINFFGSTDGVVLLFSAGGGTRVLETF 182

Query: 205 SESMAPNIEVLRANGVLDSNIAKMLSLRPIALSRDVENFIDIVEKAKEIGLNPSSLMFIH 264
           SESMAPN+EVLRANGV DSNIAKMLSLRPIALS+DVE+FIDIVEK KE+GLNPSSLMFIH
Sbjct: 183 SESMAPNVEVLRANGVPDSNIAKMLSLRPIALSKDVEHFIDIVEKTKEMGLNPSSLMFIH 242

Query: 265 GLCMISSMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNKWD 324
           G+CMI+SMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNKWD
Sbjct: 243 GMCMIASMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNKWD 302

Query: 325 WTREDISKYAVLLNLSLEKRVIPRSSIVRHLISKGFIKRKSFGIALQRPEHEFLEKFVMK 384
           WT ED+SKY VLLNLSLEKRVIPRSSIV+ LISKGFIKRKSFG ALQRPE  FLEKFVMK
Sbjct: 303 WTLEDVSKYPVLLNLSLEKRVIPRSSIVQRLISKGFIKRKSFGKALQRPEQWFLEKFVMK 362

Query: 385 YLSKDPHLLEMYQE-KKKMAI 405
           YLS+DPHLLEMYQE KKKMAI
Sbjct: 363 YLSEDPHLLEMYQETKKKMAI 383

[Close]

BLAST of IVF0002888 vs. ExPASy TrEMBL
Match: A0A0A0LK19 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G346010 PE=3 SV=1)

HSP 1 Score: 603.2 bits (1554), Expect = 7.9e-169
Identity = 309/378 (81.75%), Postives = 337/378 (89.15%), Query Frame = 0


Query: 27  LLKPSLLRLFAQDLQNFTHNNTTIGLKLLSSLSQTPQSTNDRTLDYLVHTIGLPKDSALA 86
           LLKPSLLRLFAQDL++FTHNNTTIGLK LSSLSQTPQSTND T+DYL+HTIGL K SALA
Sbjct: 5   LLKPSLLRLFAQDLRDFTHNNTTIGLKFLSSLSQTPQSTNDPTVDYLIHTIGLSKASALA 64

Query: 87  AAKKTRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSRLLLANPDTTLKPKLEFLSKNG 146
           AAK+ RLKPTA PDSVLALFNAYGFTPSHIASIFS++  LLLANPDTTLKPK EFLS+NG
Sbjct: 65  AAKQIRLKPTAHPDSVLALFNAYGFTPSHIASIFSRRPSLLLANPDTTLKPKFEFLSRNG 124

Query: 147 ISGNLLVNVICRDPYILSRSLDKQIVPCIDFLRNFFGSTDGVVLLFSAGGGTRVLETFSE 206
           ISGN L +VI RDP IL RSLDKQIVPCIDFL NFFGSTD +V LFS    TRVL TFSE
Sbjct: 125 ISGNFLADVIDRDPLILCRSLDKQIVPCIDFLINFFGSTDCIVSLFSTAHRTRVLHTFSE 184

Query: 207 SMAPNIEVLRANGVLDSNIAKMLSLRPIALSRDVENFIDIVEKAKEIGLNPSSLMFIHGL 266
            +APNIEVLRANGVLDSNIAK+L +RPIALSRDVE F DIVEK +E G NPSSLMFIHGL
Sbjct: 185 FVAPNIEVLRANGVLDSNIAKLLWMRPIALSRDVEWFTDIVEKTRERGFNPSSLMFIHGL 244

Query: 267 CMISSMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNKWDWT 326
           C +SSMSKDKWLSK+HLF+SFGWSDEQFQSMFLK+PF M  SEEHLKR LDFF+ KWDWT
Sbjct: 245 CTLSSMSKDKWLSKLHLFRSFGWSDEQFQSMFLKKPFVMNSSEEHLKRALDFFVIKWDWT 304

Query: 327 REDISKYAVLLNLSLEKRVIPRSSIVRHLISKGFIKRKSFGIALQRPEHEFLEKFVMKYL 386
            EDISKY++LLN SLEKR+IPRSSI++HLISKGFIKRKS G AL  PEH+FLEKFVMKYL
Sbjct: 305 WEDISKYSLLLNFSLEKRLIPRSSILQHLISKGFIKRKSVGSALNSPEHKFLEKFVMKYL 364

Query: 387 SKDPHLLEMYQEKKKMAI 405
           S+DP+LLEMYQEKKKMA+
Sbjct: 365 SEDPNLLEMYQEKKKMAL 382

[Close]

BLAST of IVF0002888 vs. NCBI nr
Match: XP_008444984.1 (PREDICTED: transcription termination factor MTERF8, chloroplastic-like [Cucumis melo] >KAA0054069.1 transcription termination factor MTERF8 [Cucumis melo var. makuwa] >TYJ96854.1 transcription termination factor MTERF8 [Cucumis melo var. makuwa])

HSP 1 Score: 745 bits (1923), Expect = 1.51e-270
Identity = 379/380 (99.74%), Postives = 380/380 (100.00%), Query Frame = 0


Query: 25  HSLLKPSLLRLFAQDLQNFTHNNTTIGLKLLSSLSQTPQSTNDRTLDYLVHTIGLPKDSA 84
           +SLLKPSLLRLFAQDLQNFTHNNTTIGLKLLSSLSQTPQSTNDRTLDYLVHTIGLPKDSA
Sbjct: 3   NSLLKPSLLRLFAQDLQNFTHNNTTIGLKLLSSLSQTPQSTNDRTLDYLVHTIGLPKDSA 62

Query: 85  LAAAKKTRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSRLLLANPDTTLKPKLEFLSK 144
           LAAAKKTRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSRLLLANPDTTLKPKLEFLSK
Sbjct: 63  LAAAKKTRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSRLLLANPDTTLKPKLEFLSK 122

Query: 145 NGISGNLLVNVICRDPYILSRSLDKQIVPCIDFLRNFFGSTDGVVLLFSAGGGTRVLETF 204
           NGISGNLLVNVICRDPYILSRSLDKQIVPCIDFLRNFFGSTDGVVLLFSAGGGTRVLETF
Sbjct: 123 NGISGNLLVNVICRDPYILSRSLDKQIVPCIDFLRNFFGSTDGVVLLFSAGGGTRVLETF 182

Query: 205 SESMAPNIEVLRANGVLDSNIAKMLSLRPIALSRDVENFIDIVEKAKEIGLNPSSLMFIH 264
           SESMAPNIEVLRANGVLDSNIAKMLSLRPIALSRDVENFIDIVEKAKEIGLNPSSLMFIH
Sbjct: 183 SESMAPNIEVLRANGVLDSNIAKMLSLRPIALSRDVENFIDIVEKAKEIGLNPSSLMFIH 242

Query: 265 GLCMISSMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNKWD 324
           GLCMISSMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNKWD
Sbjct: 243 GLCMISSMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNKWD 302

Query: 325 WTREDISKYAVLLNLSLEKRVIPRSSIVRHLISKGFIKRKSFGIALQRPEHEFLEKFVMK 384
           WTREDISKYAVLLNLSLEKRVIPRSSIVRHLISKGFIKRKSFGIALQRPEHEFLEKFVMK
Sbjct: 303 WTREDISKYAVLLNLSLEKRVIPRSSIVRHLISKGFIKRKSFGIALQRPEHEFLEKFVMK 362

Query: 385 YLSKDPHLLEMYQEKKKMAI 404
           YLSKDPHLLEMYQEKKKMAI
Sbjct: 363 YLSKDPHLLEMYQEKKKMAI 382

[Close]

BLAST of IVF0002888 vs. NCBI nr
Match: XP_008445328.1 (PREDICTED: transcription termination factor MTERF5, chloroplastic-like [Cucumis melo] >KAA0064842.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa])

HSP 1 Score: 683 bits (1762), Expect = 5.53e-246
Identity = 349/381 (91.60%), Postives = 364/381 (95.54%), Query Frame = 0


Query: 25  HSLLKPSLLRLFAQDLQNFTHNNTTIGLKLLSSLSQTPQSTNDRTLDYLVHTIGLPKDSA 84
           +SLLKPSLLR FAQDL+NFTHNNTTIGLK LSSLSQTPQSTNDRT DYLVHTIGLPKDSA
Sbjct: 3   NSLLKPSLLRPFAQDLRNFTHNNTTIGLKFLSSLSQTPQSTNDRTQDYLVHTIGLPKDSA 62

Query: 85  LAAAKKTRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSRLLLANPDTTLKPKLEFLSK 144
           LAAAKK RLKPTADPDSVLALFNAYGFTPSHIASIFSKQS LLLA+PDTTLKPK+EFLSK
Sbjct: 63  LAAAKKIRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSCLLLADPDTTLKPKIEFLSK 122

Query: 145 NGISGNLLVNVICRDPYILSRSLDKQIVPCIDFLRNFFGSTDGVVLLFSAGGGTRVLETF 204
           NGISGNLL +VICRDP+IL RSLDKQIVPCIDFL NFFGSTDGVVLLFSAGGGTRVLETF
Sbjct: 123 NGISGNLLADVICRDPHILHRSLDKQIVPCIDFLINFFGSTDGVVLLFSAGGGTRVLETF 182

Query: 205 SESMAPNIEVLRANGVLDSNIAKMLSLRPIALSRDVENFIDIVEKAKEIGLNPSSLMFIH 264
           SESMAPN+EVLRANGV DSNIAKMLSLRPIALS+DVE+FIDIVEK KE+GLNPSSLMFIH
Sbjct: 183 SESMAPNVEVLRANGVPDSNIAKMLSLRPIALSKDVEHFIDIVEKTKEMGLNPSSLMFIH 242

Query: 265 GLCMISSMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNKWD 324
           G+CMI+SMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNKWD
Sbjct: 243 GMCMIASMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNKWD 302

Query: 325 WTREDISKYAVLLNLSLEKRVIPRSSIVRHLISKGFIKRKSFGIALQRPEHEFLEKFVMK 384
           WT ED+SKY VLLNLSLEKRVIPRSSIV+ LISKGFIKRKSFG ALQRPE  FLEKFVMK
Sbjct: 303 WTLEDVSKYPVLLNLSLEKRVIPRSSIVQRLISKGFIKRKSFGKALQRPEQWFLEKFVMK 362

Query: 385 YLSKDPHLLEMYQE-KKKMAI 404
           YLS+DPHLLEMYQE KKKMAI
Sbjct: 363 YLSEDPHLLEMYQETKKKMAI 383

[Close]

BLAST of IVF0002888 vs. NCBI nr
Match: XP_004143080.2 (uncharacterized protein LOC101214641 [Cucumis sativus] >KGN62260.1 hypothetical protein Csa_018661 [Cucumis sativus])

HSP 1 Score: 607 bits (1564), Expect = 1.52e-215
Identity = 309/378 (81.75%), Postives = 337/378 (89.15%), Query Frame = 0


Query: 27  LLKPSLLRLFAQDLQNFTHNNTTIGLKLLSSLSQTPQSTNDRTLDYLVHTIGLPKDSALA 86
           LLKPSLLRLFAQDL++FTHNNTTIGLK LSSLSQTPQSTND T+DYL+HTIGL K SALA
Sbjct: 5   LLKPSLLRLFAQDLRDFTHNNTTIGLKFLSSLSQTPQSTNDPTVDYLIHTIGLSKASALA 64

Query: 87  AAKKTRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSRLLLANPDTTLKPKLEFLSKNG 146
           AAK+ RLKPTA PDSVLALFNAYGFTPSHIASIFS++  LLLANPDTTLKPK EFLS+NG
Sbjct: 65  AAKQIRLKPTAHPDSVLALFNAYGFTPSHIASIFSRRPSLLLANPDTTLKPKFEFLSRNG 124

Query: 147 ISGNLLVNVICRDPYILSRSLDKQIVPCIDFLRNFFGSTDGVVLLFSAGGGTRVLETFSE 206
           ISGN L +VI RDP IL RSLDKQIVPCIDFL NFFGSTD +V LFS    TRVL TFSE
Sbjct: 125 ISGNFLADVIDRDPLILCRSLDKQIVPCIDFLINFFGSTDCIVSLFSTAHRTRVLHTFSE 184

Query: 207 SMAPNIEVLRANGVLDSNIAKMLSLRPIALSRDVENFIDIVEKAKEIGLNPSSLMFIHGL 266
            +APNIEVLRANGVLDSNIAK+L +RPIALSRDVE F DIVEK +E G NPSSLMFIHGL
Sbjct: 185 FVAPNIEVLRANGVLDSNIAKLLWMRPIALSRDVEWFTDIVEKTRERGFNPSSLMFIHGL 244

Query: 267 CMISSMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNKWDWT 326
           C +SSMSKDKWLSK+HLF+SFGWSDEQFQSMFLK+PF M  SEEHLKR LDFF+ KWDWT
Sbjct: 245 CTLSSMSKDKWLSKLHLFRSFGWSDEQFQSMFLKKPFVMNSSEEHLKRALDFFVIKWDWT 304

Query: 327 REDISKYAVLLNLSLEKRVIPRSSIVRHLISKGFIKRKSFGIALQRPEHEFLEKFVMKYL 386
            EDISKY++LLN SLEKR+IPRSSI++HLISKGFIKRKS G AL  PEH+FLEKFVMKYL
Sbjct: 305 WEDISKYSLLLNFSLEKRLIPRSSILQHLISKGFIKRKSVGSALNSPEHKFLEKFVMKYL 364

Query: 387 SKDPHLLEMYQEKKKMAI 404
           S+DP+LLEMYQEKKKMA+
Sbjct: 365 SEDPNLLEMYQEKKKMAL 382

[Close]

BLAST of IVF0002888 vs. NCBI nr
Match: XP_004138819.1 (uncharacterized protein LOC101219073 [Cucumis sativus] >KGN63092.1 hypothetical protein Csa_022198 [Cucumis sativus])

HSP 1 Score: 577 bits (1487), Expect = 3.81e-204
Identity = 290/378 (76.72%), Postives = 329/378 (87.04%), Query Frame = 0


Query: 27  LLKPSLLRLFAQDLQNFTHNNTTIGLKLLSSLSQTPQSTNDRTLDYLVHTIGLPKDSALA 86
           L KPSLLRL+AQDL+NF HN TTIGL  LSSLSQ+PQSTN RTLDYL+HTIGL KDSALA
Sbjct: 5   LRKPSLLRLYAQDLRNFAHNKTTIGLNFLSSLSQSPQSTNHRTLDYLIHTIGLSKDSALA 64

Query: 87  AAKKTRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSRLLLANPDTTLKPKLEFLSKNG 146
           AAKK  LKP++DPDSVLALFNAYGFTPS  A+IF +Q RLLLA+PD TLKPK EFLSKNG
Sbjct: 65  AAKKIHLKPSSDPDSVLALFNAYGFTPSQTANIFCRQPRLLLADPDKTLKPKFEFLSKNG 124

Query: 147 ISGNLLVNVICRDPYILSRSLDKQIVPCIDFLRNFFGSTDGVVLLFSAGGGTRVLETFSE 206
           ISGN LV++ICR+P+IL RSLDK+IVPC DFL NFFGSTD +V LF     TRVL TFSE
Sbjct: 125 ISGNFLVDLICREPHILRRSLDKKIVPCFDFLINFFGSTDCIVSLFCTTHRTRVLHTFSE 184

Query: 207 SMAPNIEVLRANGVLDSNIAKMLSLRPIALSRDVENFIDIVEKAKEIGLNPSSLMFIHGL 266
            MAPNIEVLRANGV DS+IAK+   RP+ALSRDV+ F DIVEK KE G NPSSLMFI+GL
Sbjct: 185 FMAPNIEVLRANGVPDSSIAKLFWKRPVALSRDVKWFTDIVEKTKERGFNPSSLMFINGL 244

Query: 267 CMISSMSKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNKWDWT 326
           C++SSMSKD+WLSK+H+F+S+GWSDEQFQSMFLKQP FM RSEE LKR LDFFMNKWDWT
Sbjct: 245 CIVSSMSKDRWLSKLHIFRSYGWSDEQFQSMFLKQPCFMNRSEEGLKRALDFFMNKWDWT 304

Query: 327 REDISKYAVLLNLSLEKRVIPRSSIVRHLISKGFIKRKSFGIALQRPEHEFLEKFVMKYL 386
           RE+I +Y ++L LS EKRV+PRSSI++HLISKG IKRKS G+AL+  EHEFLEKFVM+YL
Sbjct: 305 REEIYRYPIVLILSFEKRVMPRSSILQHLISKGLIKRKSLGMALKISEHEFLEKFVMQYL 364

Query: 387 SKDPHLLEMYQEKKKMAI 404
           S+DPHLLEMYQEKKK+AI
Sbjct: 365 SEDPHLLEMYQEKKKIAI 382

[Close]

BLAST of IVF0002888 vs. NCBI nr
Match: XP_022132136.1 (transcription termination factor MTERF8, chloroplastic-like [Momordica charantia])

HSP 1 Score: 511 bits (1315), Expect = 5.11e-178
Identity = 266/372 (71.51%), Postives = 303/372 (81.45%), Query Frame = 0


Query: 33  LRLFAQDLQNFTHNNTTIGLKLLSSLSQTPQSTNDRTLDYLVHTIGLPKDSALAAAKKTR 92
           LRL A+DL+ FT N+ +IGL   SSLSQ  QSTN+RT+DYLV T+GL KDSA+A AK+  
Sbjct: 10  LRLLARDLRKFTDNSISIGLNSFSSLSQISQSTNNRTVDYLVRTLGLSKDSAVAVAKRIH 69

Query: 93  LKPTADPDSVLALFNAYGFTPSHIASIFSKQSRLLLANPDTTLKPKLEFLSKNGISGNLL 152
           LK TA+PDSV+ALF AYGF PS+ ASIF +   LLLA+PDTTLKPKLEFLS+NG+SG +L
Sbjct: 70  LKRTANPDSVIALFEAYGFAPSNTASIFCRNPSLLLADPDTTLKPKLEFLSQNGVSGQVL 129

Query: 153 VNVICRDPYILSRSLDKQIVPCIDFLRNFFGSTDGVVLLFSAGGGTRVLETFSESMAPNI 212
           V+VI RDP IL RSLDKQI+PCIDFLRNFFGSTDG+V LFSA  GT VL  FSES+APNI
Sbjct: 130 VDVISRDPSILRRSLDKQIIPCIDFLRNFFGSTDGIVSLFSARRGTWVLHKFSESVAPNI 189

Query: 213 EVLRANGVLDSNIAKMLSLRPIALSRDVENFIDIVEKAKEIGLNPSSLMFIHGLCMISSM 272
           E LRA GV DSNIAKM+ +RP  LSRD E FIDIVEK KE G NPSSLMFI+GLC  S M
Sbjct: 190 ERLRAYGVPDSNIAKMIWVRPRTLSRDAEGFIDIVEKTKEAGFNPSSLMFIYGLCTFSGM 249

Query: 273 SKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNKWDWTREDISK 332
            KDKWLSK+ +FKSFGWS+EQFQS+FLKQP FM  SEE +KR LDFFMNK DWT E+ISK
Sbjct: 250 KKDKWLSKLQVFKSFGWSEEQFQSLFLKQPKFMNSSEEQIKRALDFFMNKLDWTPEEISK 309

Query: 333 YAVLLNLSLEKRVIPRSSIVRHLISKGFIKRKSFGIALQRPEHEFLEKFVMKYLSKDPHL 392
           Y ++L LS EKRVIPRSSI++HLISKGFIK+ S G A    E +FL KFVM+YLSKDPHL
Sbjct: 310 YPIVLFLSFEKRVIPRSSILQHLISKGFIKKTSVGKAFMIREDKFLVKFVMQYLSKDPHL 369

Query: 393 LEMYQEKKKMAI 404
           LEMYQ  KKMAI
Sbjct: 370 LEMYQ--KKMAI 379

[Close]

BLAST of IVF0002888 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 185.7 bits (470), Expect = 7.6e-47
Identity = 112/330 (33.94%), Postives = 180/330 (54.55%), Query Frame = 0


Query: 69  TLDYLVHTIGLPKDSALAAAKKTRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSRLLL 128
           TL+YL+ + GL  DSA  A++K  L     P++VL L   +GFT + I+S+  K+  LLL
Sbjct: 71  TLNYLIDSCGLSPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLL 130

Query: 129 ANPDTTLKPKLEFLSKNGISGNLLVNVICRDPYILSRSLDKQIVPCIDFLRNFFGSTDGV 188
           AN ++ L PKL F    G+S +LL   +  DP IL+RSL  Q++P  +FL++   S + +
Sbjct: 131 ANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDEKI 190

Query: 189 VLLFSAGGGTRVLETFSESMAPNIEVLRANGVLDSNIAKMLSLRPIALSRDVENFIDIVE 248
           V           LE  ++++ PNI  +   GV +  I  +L+  P A+ +    F  I +
Sbjct: 191 VAALRRTTWV-FLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIAK 250

Query: 249 KAKEIGLNPSSLMFIHGLCMISSM-SKDKWLSKVHLFKSFGWSDEQFQSMFLKQPFFMKR 308
           +A+E+G NP    F+  +  +S   +K  W     +++ +GWS++     F K P  M  
Sbjct: 251 QAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMML 310

Query: 309 SEEHLKRMLDFFMNKWDWTREDISKYAVLLNLSLEKRVIPRSSIVRHLISKGFIKRK-SF 368
           SE  + R +++F+N+ +     I++  V+L  SLEKR+IPR S+ + L+S G +K   S 
Sbjct: 311 SERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWSL 370

Query: 369 GIALQRPEHEFLEKFVMKYLSKDPHLLEMY 397
              L   E  FLEK V+KY  + P L+ +Y
Sbjct: 371 TSLLVPVEKVFLEKLVIKYEEELPELMNLY 399

[Close]

BLAST of IVF0002888 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 166.4 bits (420), Expect = 4.8e-41
Identity = 103/359 (28.69%), Postives = 180/359 (50.14%), Query Frame = 0


Query: 52  LKLLSSLSQTPQSTNDR--------TLDYLVHTIGLPKDSALAAAKKTRLKPTADPDSVL 111
           ++ L S+SQ      ++        T+ YLV + GL  +SA + ++  +L  +  PDSVL
Sbjct: 33  IRTLCSVSQVKSENLEKQKPCLESFTVSYLVDSCGLSLESAKSNSRFVKLVSSKKPDSVL 92

Query: 112 ALFNAYGFTPSHIASIFSKQSRLLLANPDTTLKPKLEFLSKNGISGNLLVNVICRDPYIL 171
           ALF  +GFT   I S+     R+L  +P+  + PKL F S  G S +    +I   P +L
Sbjct: 93  ALFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKML 152

Query: 172 SRSLDKQIVPCIDFLRNFFGSTDGVVLLFSAGGGTRVLETFSESMAPNIEVLRANGVLDS 231
           S SL K+++PC D L++     + VV     G     L+  +  ++  + + R  GV D 
Sbjct: 153 SYSLHKRLIPCYDSLKSILVEEESVVKCLKRGIRCFSLK-ITHCVSLRVSICRELGVPDK 212

Query: 232 NIAKMLSLRPIALSRDVENFIDIVEKAKEIGLNPSSLMFIHGLCMISSMSKDKWLSKVHL 291
           +I  ++   P         F +++ +    G +P    F+H +      S+     K  L
Sbjct: 213 SIKWLVQASPFTFFSRERRFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKL 272

Query: 292 FKSFGWSDEQFQSMFLKQPFFMKRSEEHLKRMLDFFMNKWDWTREDISKYAVLLNLSLEK 351
           F+ FGWS E F +  ++ P  +  S+E +   L++ +N       DI    V+L+LS+EK
Sbjct: 273 FQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEK 332

Query: 352 RVIPRSSIVRHLISKGFIKRK--SFGIALQRPEHEFLEKFVMKYLSKDPHLLEMYQEKK 401
           R+ PR+ ++  L+SKG +K++  ++   L+    EF++KFV+KY  + P L++ +   +
Sbjct: 333 RIKPRNQVISLLLSKGLVKKEDINYFTILKLKSSEFMDKFVLKYQDEMPQLVQPFTSNR 390

[Close]

BLAST of IVF0002888 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 134.4 bits (337), Expect = 2.0e-31
Identity = 87/336 (25.89%), Postives = 170/336 (50.60%), Query Frame = 0


Query: 57  SLSQTPQSTNDRTLDYLVHTIGLPKDSALAAAKK-TRLKPTADPDSVLALFNAYGFTPSH 116
           S + TP S ++      +   G  K  A+A A +   LK    P SV+ +  +Y F+ + 
Sbjct: 28  SSNATPASISNPAFVEFLRDNGFQKPLAIAIAMRYPNLKSLEQPRSVIQMLKSYSFSDTQ 87

Query: 117 IASIFSKQSRLLLANPDTTLKPKLEFLSKNGISGNLLVNVICRDPYILSRSLDKQIVPCI 176
           I        R++  N +  L+PKL F    G +G+ L   + ++  ++  SL K+++P +
Sbjct: 88  IQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQNSSVVGVSLVKKLIPTV 147

Query: 177 DFLRNFFG-STDGVVLLFSAGGGTRVLETFSESMAPNIEVLRANGVLDSNIAKMLSLRPI 236
           + L++      + + ++ S  G   +    +  + PNI  L   G++ S +A +L  +P 
Sbjct: 148 EILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPNISYLETCGIVGSQLASLLRRQPR 207

Query: 237 ALSRDVENFIDIVEKAKEIGLNPSSLMFIHGLCMISSMSKDKWLSKVHLFKSFGWSDEQF 296
             +   E     V +A ++G   +S M +H +  +SS+S+  +  KV LF + G+S+++ 
Sbjct: 208 IFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFDRKVKLFMANGFSEDEI 267

Query: 297 QSMFLKQPFFMKRSEEHLKRMLDFFMNKWDWTREDISKYAVLLNLSLEKRVIPRSSIVRH 356
             +  + P  ++ SE+ L    +F++ +    RE ++K   +L+ +LEKRVIPR  +++ 
Sbjct: 268 TDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLSYNLEKRVIPRLKVLQI 327

Query: 357 LISKGFI-----KRKSFGIALQRPEHEFLEKFVMKY 386
           L  KG +     K+K+    ++  E  FLEK+V+++
Sbjct: 328 LREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRF 363

[Close]

BLAST of IVF0002888 vs. TAIR 10
Match: AT1G61980.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 132.9 bits (333), Expect = 5.8e-31
Identity = 103/377 (27.32%), Postives = 175/377 (46.42%), Query Frame = 0


Query: 69  TLDYLVHTIGLPKDSALAAAKKTRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSRLLL 128
           T+ YLV ++GLPK  A + ++K   +   +PDSVL L  ++GFT S I++I +   +LL+
Sbjct: 54  TVSYLVDSLGLPKKLAESVSRKVSFEDKDNPDSVLNLLRSHGFTDSQISTIVTDYPQLLV 113

Query: 129 ANPDTTLKPKLEFLSKNGISGNLLVNVICRDPYILSRSLDKQIVPCIDFLRNFFGSTDGV 188
           A+ + +L PKL+FL   G S + L  ++   P IL +   K I    DF++         
Sbjct: 114 ADAEKSLAPKLQFLQSRGASSSELTEIVSTVPKILGKRGHKTISVFYDFIKE-------- 173

Query: 189 VLLFSAGGGTRVLETFS----ESMAPNIEVLRANGVLDSNIAKMLSLRPIALSRDV---- 248
            LL  +    +  + F     E+   N+ VLR  G+          L P+ +S DV    
Sbjct: 174 TLLDKSSKSEKSCQPFPQGNLENKIRNLSVLRELGMPHK------LLFPLLISCDVPVFG 233

Query: 249 -ENFIDIVEKAKEIGLNPSSLMFIHGLCMISSMSKDKWLSKVHLFKSFGWSDEQFQSMFL 308
            E F + ++K  E+G +PS+  F+  LC++  +S      KV+ +K  G+  E   ++F 
Sbjct: 234 KEKFEESLKKVVEMGFDPSTSKFVEALCVVQRLSDKNIEDKVNAYKRLGFDVEYVWTVFK 293

Query: 309 KQPFFMKRSE-----------------------------------EHLKRMLDFFMNKWD 368
           + P F+  SE                                   E +K+  +F + K +
Sbjct: 294 RWPNFLTHSEKKILNTIETFLGLGFSRDEFSVLIKRFPQGIGLSAEMVKKKTEFLVKKMN 353

Query: 369 WTREDISKYAVLLNLSLEKRVIPRSSIVRHLISKGFI--KRKSFGIALQRPEHEFLEKFV 398
           W  + +     +L  SLEKR +PR ++V+ LISKG I  +  S        +  FL ++V
Sbjct: 354 WPLKALVSNPAVLGYSLEKRTVPRGNVVQALISKGLIGSELPSISRVFVCTDQVFLNRYV 413

[Close]

BLAST of IVF0002888 vs. TAIR 10
Match: AT1G61970.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 126.7 bits (317), Expect = 4.2e-29
Identity = 98/365 (26.85%), Postives = 171/365 (46.85%), Query Frame = 0


Query: 66  NDRTLDYLVHTIGLPKDSALAAAKKTRLKPTADPDSVLALFNAYGFTPSHIASIFSKQSR 125
           N+ T+ YLV ++GL    A + ++K   +   +PDSVL L  ++GFT S I++I     +
Sbjct: 51  NNFTVSYLVDSLGLTTKLAESISRKVSFEDKNNPDSVLNLLTSHGFTGSQISTIIRDYPQ 110

Query: 126 LLLANPDTTLKPKLEFLSKNGISGNLLVNVICRDPYILSRSLDKQIVPCIDFLRNFF--G 185
           LL+A+ + +L PKL+FL   G S + +  ++   P IL +   K I    DF+++     
Sbjct: 111 LLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEK 170

Query: 186 STDGVVLLFSAGGGTRVLETFSESMAPNIEVLRANGVLDSNIAKMLSLRPIALSRDV--- 245
           S+    L  S   G        E+   N+ VLR  G+    +  +L    I+ S+ V   
Sbjct: 171 SSKNEKLCHSLPQGN------LENKIRNVSVLRELGMPHKLLFSLL----ISDSQPVCGK 230

Query: 246 ENFIDIVEKAKEIGLNPSSLMFIHGLCMISSMSKDKWLSKVHLFKSFGWSDEQFQSMFLK 305
           E F + ++K  E+G +P++  F+  L +I  M++     KVHL+KS G+      S F K
Sbjct: 231 EKFEETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKK 290

Query: 306 QPFFMKRSE-----------------------------------EHLKRMLDFFMNKWDW 365
            P  ++ SE                                   E +K+  +F + K +W
Sbjct: 291 WPISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNW 350

Query: 366 TREDISKYAVLLNLSLEKRVIPRSSIVRHLISKGFIKRK--SFGIALQRPEHEFLEKFVM 389
             + +     +   SLEKR++PR ++++ L+SKG ++ +  S    L   +  FL ++V 
Sbjct: 351 PLKAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVA 405

The following BLAST results are available for this feature:

BLAST of IVF0002888 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FK23	3.7e-06	21.83	Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9FM80	9.2e-05	19.93	Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O...	[more]

BLAST of IVF0002888 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UKN0	1.9e-210	99.74	Transcription termination factor MTERF8 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BCI2	1.9e-210	99.74	transcription termination factor MTERF8, chloroplastic-like OS=Cucumis melo OX=3...	[more]
A0A5A7V906	8.7e-192	91.60	Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BCE7	8.7e-192	91.60	transcription termination factor MTERF5, chloroplastic-like OS=Cucumis melo OX=3...	[more]
A0A0A0LK19	7.9e-169	81.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G346010 PE=3 SV=1	[more]

BLAST of IVF0002888 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008444984.1	1.51e-270	99.74	PREDICTED: transcription termination factor MTERF8, chloroplastic-like [Cucumis ...	[more]
XP_008445328.1	5.53e-246	91.60	PREDICTED: transcription termination factor MTERF5, chloroplastic-like [Cucumis ...	[more]
XP_004143080.2	1.52e-215	81.75	uncharacterized protein LOC101214641 [Cucumis sativus] >KGN62260.1 hypothetical ...	[more]
XP_004138819.1	3.81e-204	76.72	uncharacterized protein LOC101219073 [Cucumis sativus] >KGN63092.1 hypothetical ...	[more]
XP_022132136.1	5.11e-178	71.51	transcription termination factor MTERF8, chloroplastic-like [Momordica charantia...	[more]

BLAST of IVF0002888 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07900.1	7.6e-47	33.94	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	4.8e-41	28.69	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	2.0e-31	25.89	Mitochondrial transcription termination factor family protein	[more]
AT1G61980.1	5.8e-31	27.32	Mitochondrial transcription termination factor family protein	[more]
AT1G61970.1	4.2e-29	26.85	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 117..148 e-value: 0.084 score: 22.0 coord: 327..361 e-value: 20.0 score: 14.1 coord: 295..326 e-value: 23.0 score: 13.9 coord: 260..290 e-value: 320.0 score: 7.7 coord: 226..256 e-value: 200.0 score: 9.3 coord: 153..185 e-value: 0.07 score: 22.3
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 103..181 e-value: 1.6E-11 score: 43.7 coord: 206..377 e-value: 8.5E-20 score: 70.9
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 29..402
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 197..391 e-value: 1.2E-35 score: 124.9 coord: 69..195 e-value: 1.0E-21 score: 79.3
None	No IPR available	PANTHER	PTHR13068:SF187	SUBFAMILY NOT NAMED	coord: 29..402

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0002888.2	IVF0002888.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0032502	developmental process
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003690	double-stranded DNA binding