IVF0002871 (gene) Melon (IVF77) v1

Overview


Name	IVF0002871
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	LRR receptor-like serine/threonine-protein kinase FEI 1 isoform X2
Location	chr12: 15085395 .. 15085780 (-)
RNA-Seq Expression	IVF0002871
Synteny	IVF0002871

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAGAAGATTGAAGAAACTTTGAGGTCTTTGGCAGAGGAGATTGATTGGTTTAGGGTTCGAATGGAGAAAAACCAACAGCTGATGTTGAAGTACATTGAAATGATGCCAAAAAAAAAACGACGATGAGAGAAACAGAAGATTCGCTAATGAAATTTATGGAAGATATGGTACTTGAGAATTCTACAACAAAGAGAGCAATGGAAGGTTCATTCAGTCGAACAAAGACGAGTGAAAATATGGTAGAGCAAGCTGAAGCTTCGATACTTGAAATAATTAAGGAATCGAAGACGAGCACGAAGATTATTGAGCATCAAGCTGAGGAACAACAACAGATATCATGCATCGAAAGCTTGGCGAAGGAAAAAAAATGCAATGGGTGA

mRNA sequence

ATGGCGAAGAAGATTGAAGAAACTTTGAGGTCTTTGGCAGAGGAGATTGATTGGTTTAGGGTTCGAATGGAGAAAAACCAACAGCTGATGTTGAAAGAAACAGAAGATTCGCTAATGAAATTTATGGAAGATATGGTACTTGAGAATTCTACAACAAAGAGAGCAATGGAAGGTTCATTCAGTCGAACAAAGACGAGTGAAAATATGGTAGAGCAAGCTGAAGCTTCGATACTTGAAATAATTAAGGAATCGAAGACGAGCACGAAGATTATTGAGCATCAAGCTGAGGAACAACAACAGATATCATGCATCGAAAGCTTGGCGAAGGAAAAAAAATGCAATGGGTGA

Coding sequence (CDS)

ATGGCGAAGAAGATTGAAGAAACTTTGAGGTCTTTGGCAGAGGAGATTGATTGGTTTAGGGTTCGAATGGAGAAAAACCAACAGCTGATGTTGAAAGAAACAGAAGATTCGCTAATGAAATTTATGGAAGATATGGTACTTGAGAATTCTACAACAAAGAGAGCAATGGAAGGTTCATTCAGTCGAACAAAGACGAGTGAAAATATGGTAGAGCAAGCTGAAGCTTCGATACTTGAAATAATTAAGGAATCGAAGACGAGCACGAAGATTATTGAGCATCAAGCTGAGGAACAACAACAGATATCATGCATCGAAAGCTTGGCGAAGGAAAAAAAATGCAATGGGTGA

Protein sequence

MAKKIEETLRSLAEEIDWFRVRMEKNQQLMLKETEDSLMKFMEDMVLENSTTKRAMEGSFSRTKTSENMVEQAEASILEIIKESKTSTKIIEHQAEEQQQISCIESLAKEKKCNG

Homology

[Close]

BLAST of IVF0002871 vs. ExPASy TrEMBL
Match: A0A5D3BUF4 (LRR receptor-like serine/threonine-protein kinase FEI 1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G001090 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 2.1e-26
Identity = 69/81 (85.19%), Postives = 76/81 (93.83%), Query Frame = 0


Query: 31  LKETEDSLMKFMEDMVLENSTTKRAMEGSFSRTKTSENMVEQAEASILEIIKESKTSTKI 90
           ++ETEDSLMK+MEDM+LENSTTKR +EGSFSRTKTSEN VEQAEASILEIIKES+TS KI
Sbjct: 1   MRETEDSLMKYMEDMILENSTTKRVIEGSFSRTKTSENKVEQAEASILEIIKESETSKKI 60

Query: 91  IEHQAEEQQQISCIESLAKEK 112
           IEHQ E+QQQI CIESLAKEK
Sbjct: 61  IEHQVEKQQQIPCIESLAKEK 81

[Close]

BLAST of IVF0002871 vs. ExPASy TrEMBL
Match: A0A5A7UFJ8 (LRR receptor-like serine/threonine-protein kinase FEI 1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold207G001220 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 2.1e-26
Identity = 69/81 (85.19%), Postives = 76/81 (93.83%), Query Frame = 0


Query: 31  LKETEDSLMKFMEDMVLENSTTKRAMEGSFSRTKTSENMVEQAEASILEIIKESKTSTKI 90
           ++ETEDSLMK+MEDM+LENSTTKR +EGSFSRTKTSEN VEQAEASILEIIKES+TS KI
Sbjct: 1   MRETEDSLMKYMEDMILENSTTKRVIEGSFSRTKTSENKVEQAEASILEIIKESETSKKI 60

Query: 91  IEHQAEEQQQISCIESLAKEK 112
           IEHQ E+QQQI CIESLAKEK
Sbjct: 61  IEHQVEKQQQIPCIESLAKEK 81

[Close]

BLAST of IVF0002871 vs. ExPASy TrEMBL
Match: A0A5A7T6Q0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold322G00090 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 6.7e-04
Identity = 41/95 (43.16%), Postives = 54/95 (56.84%), Query Frame = 0


Query: 5   IEETLRSLA--EEIDWFRVRMEKNQQLMLKETEDSLMKFMEDMVLENSTTKRAMEGSFSR 64
           +EE L SLA  + I+   ++ EK QQ         LMK++E +V E        EGS SR
Sbjct: 37  VEEKLSSLAMVKNIEQLSIQSEKQQQ-----QHQLLMKYIEGIVKEKFVITLDTEGSSSR 96

Query: 65  TKTSENMVEQAEASILEIIKESKTSTKIIEHQAEE 98
           TKTSEN V + EA ILE+ +ESKTS K  E +  +
Sbjct: 97  TKTSENKVVEGEAMILELTEESKTSKKKEEEKTSD 126

[Close]

BLAST of IVF0002871 vs. NCBI nr
Match: TYK01856.1 (LRR receptor-like serine/threonine-protein kinase FEI 1 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 127 bits (319), Expect = 2.51e-31
Identity = 69/81 (85.19%), Postives = 76/81 (93.83%), Query Frame = 0


Query: 31  LKETEDSLMKFMEDMVLENSTTKRAMEGSFSRTKTSENMVEQAEASILEIIKESKTSTKI 90
           ++ETEDSLMK+MEDM+LENSTTKR +EGSFSRTKTSEN VEQAEASILEIIKES+TS KI
Sbjct: 1   MRETEDSLMKYMEDMILENSTTKRVIEGSFSRTKTSENKVEQAEASILEIIKESETSKKI 60

Query: 91  IEHQAEEQQQISCIESLAKEK 111
           IEHQ E+QQQI CIESLAKEK
Sbjct: 61  IEHQVEKQQQIPCIESLAKEK 81

[Close]

BLAST of IVF0002871 vs. NCBI nr
Match: KAA0052291.1 (LRR receptor-like serine/threonine-protein kinase FEI 1 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 127 bits (319), Expect = 2.51e-31
Identity = 69/81 (85.19%), Postives = 76/81 (93.83%), Query Frame = 0


Query: 31  LKETEDSLMKFMEDMVLENSTTKRAMEGSFSRTKTSENMVEQAEASILEIIKESKTSTKI 90
           ++ETEDSLMK+MEDM+LENSTTKR +EGSFSRTKTSEN VEQAEASILEIIKES+TS KI
Sbjct: 1   MRETEDSLMKYMEDMILENSTTKRVIEGSFSRTKTSENKVEQAEASILEIIKESETSKKI 60

Query: 91  IEHQAEEQQQISCIESLAKEK 111
           IEHQ E+QQQI CIESLAKEK
Sbjct: 61  IEHQVEKQQQIPCIESLAKEK 81

[Close]

BLAST of IVF0002871 vs. NCBI nr
Match: KAE8648096.1 (hypothetical protein Csa_004705 [Cucumis sativus])

HSP 1 Score: 76.3 bits (186), Expect = 2.53e-14
Identity = 63/136 (46.32%), Postives = 79/136 (58.09%), Query Frame = 0


Query: 1   MAKKIEETLRSLAEEIDWFRVRMEKNQQLMLK---------------------ETEDS-- 60
           M KKIEETLRSLA+ ID   + +E++ Q +LK                     E E++  
Sbjct: 1   MVKKIEETLRSLAKAIDRRGIHIEESHQRLLKWVKMTEKEETKRREIEEAKRREIEEAKR 60

Query: 61  ----LMKFMEDMVLENSTTKRAMEGSFSRTKTSENMVEQAEASILEIIKESKTSTKIIEH 106
               LMK++EDM  E STT    E SFSR K SEN  EQ EASILEII+ SK S K++E 
Sbjct: 61  REIELMKYIEDMNREKSTTSET-EDSFSRIKMSENKEEQGEASILEIIEGSKMSKKVLEK 120

[Close]

BLAST of IVF0002871 vs. NCBI nr
Match: KAA0039162.1 (hypothetical protein E6C27_scaffold121G00640 [Cucumis melo var. makuwa] >TYK26950.1 hypothetical protein E5676_scaffold322G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 53.5 bits (127), Expect = 3.37e-06
Identity = 40/87 (45.98%), Postives = 51/87 (58.62%), Query Frame = 0


Query: 5   IEETLRSLA--EEIDWFRVRMEKNQQLMLKETEDSLMKFMEDMVLENSTTKRAMEGSFSR 64
           +EE L SLA  + I+   ++ EK QQ         LMK++E +V E        EGS SR
Sbjct: 37  VEEKLSSLAMVKNIEQLSIQSEKQQQ-----QHQLLMKYIEGIVKEKFVITLDTEGSSSR 96

Query: 65  TKTSENMVEQAEASILEIIKESKTSTK 89
           TKTSEN V + EA ILE+ +ESKTS K
Sbjct: 97  TKTSENKVVEGEAMILELTEESKTSKK 118

The following BLAST results are available for this feature:

BLAST of IVF0002871 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0002871 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BUF4	2.1e-26	85.19	LRR receptor-like serine/threonine-protein kinase FEI 1 isoform X2 OS=Cucumis me...	[more]
A0A5A7UFJ8	2.1e-26	85.19	LRR receptor-like serine/threonine-protein kinase FEI 1 isoform X2 OS=Cucumis me...	[more]
A0A5A7T6Q0	6.7e-04	43.16	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of IVF0002871 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK01856.1	2.51e-31	85.19	LRR receptor-like serine/threonine-protein kinase FEI 1 isoform X2 [Cucumis melo...	[more]
KAA0052291.1	2.51e-31	85.19	LRR receptor-like serine/threonine-protein kinase FEI 1 isoform X2 [Cucumis melo...	[more]
KAE8648096.1	2.53e-14	46.32	hypothetical protein Csa_004705 [Cucumis sativus]	[more]
KAA0039162.1	3.37e-06	45.98	hypothetical protein E6C27_scaffold121G00640 [Cucumis melo var. makuwa] >TYK2695...	[more]

BLAST of IVF0002871 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0002871.2	IVF0002871.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030244	cellulose biosynthetic process
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity