IVF0002839 (gene) Melon (IVF77) v1

Overview


Name	IVF0002839
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Ethylene-responsive transcription factor LEP
Location	chr09: 15746257 .. 15746943 (-)
RNA-Seq Expression	IVF0002839
Synteny	IVF0002839

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTCCATCGCCCTCAAAACCCAAAAGAAAGCACCACCCCCCGCCCCCGGCAGAACCAACGCCCCACCGTTTCCTCGGAGTCCGTCGACGACCCTGGGGTCGTTATGCAGCCGAGATCAGAGACCCTTCAACCAAAGAGCGTCATTGGCTCGGCACCTTCGACACCGCCGAGGAGGCCGCCATTGCCTACGACCGTGCTGCCCGCTCCCTCCGCGGCTCCCTCGCTCGCACCAACTTCCTCTACTCCGACTCTCCGCCGCCTCCTCCGCCACCTTACTCTGCCTCCATTCACCCCAGTCAGCCTCCTCTGTTCCTTCCTCTGCTTCCACCCCCTCCTCCGCCTCTTTTCCACCAATTCCCCCCCGCCGGAGACTCGCCTTCCGGAATAATCTACGGCGATTACGACGGCAGCAGCGCTGAGCTTCCGCCATTTCCTCCGGCAATTTCGTCCGAATCGGAGAATTGTGATTACAATAATTACGGTGCGATGGAATCACAGAACGTTGGATTTGAATGCTTTGATCAATCGTCGATTGGAATGGGGTCGTGTTTGGGATTCGATTCGAGTGGTGATTATATGTATAATCCGATGTTGGGTTCGATGGCGACGGTTTCCGACGCCGGCACCGGTGATCTTCAGTCCCCGGCGGCTAATTTCTATTTGCCTCAGTCTTCAGAGTATTGA

mRNA sequence

ATGAGTCCATCGCCCTCAAAACCCAAAAGAAAGCACCACCCCCCGCCCCCGGCAGAACCAACGCCCCACCGTTTCCTCGGAGTCCGTCGACGACCCTGGGGTCGTTATGCAGCCGAGATCAGAGACCCTTCAACCAAAGAGCGTCATTGGCTCGGCACCTTCGACACCGCCGAGGAGGCCGCCATTGCCTACGACCGTGCTGCCCGCTCCCTCCGCGGCTCCCTCGCTCGCACCAACTTCCTCTACTCCGACTCTCCGCCGCCTCCTCCGCCACCTTACTCTGCCTCCATTCACCCCAGTCAGCCTCCTCTGTTCCTTCCTCTGCTTCCACCCCCTCCTCCGCCTCTTTTCCACCAATTCCCCCCCGCCGGAGACTCGCCTTCCGGAATAATCTACGGCGATTACGACGGCAGCAGCGCTGAGCTTCCGCCATTTCCTCCGGCAATTTCGTCCGAATCGGAGAATTGTGATTACAATAATTACGGTGCGATGGAATCACAGAACGTTGGATTTGAATGCTTTGATCAATCGTCGATTGGAATGGGGTCGTGTTTGGGATTCGATTCGAGTGGTGATTATATGTATAATCCGATGTTGGGTTCGATGGCGACGGTTTCCGACGCCGGCACCGGTGATCTTCAGTCCCCGGCGGCTAATTTCTATTTGCCTCAGTCTTCAGAGTATTGA

Coding sequence (CDS)

ATGAGTCCATCGCCCTCAAAACCCAAAAGAAAGCACCACCCCCCGCCCCCGGCAGAACCAACGCCCCACCGTTTCCTCGGAGTCCGTCGACGACCCTGGGGTCGTTATGCAGCCGAGATCAGAGACCCTTCAACCAAAGAGCGTCATTGGCTCGGCACCTTCGACACCGCCGAGGAGGCCGCCATTGCCTACGACCGTGCTGCCCGCTCCCTCCGCGGCTCCCTCGCTCGCACCAACTTCCTCTACTCCGACTCTCCGCCGCCTCCTCCGCCACCTTACTCTGCCTCCATTCACCCCAGTCAGCCTCCTCTGTTCCTTCCTCTGCTTCCACCCCCTCCTCCGCCTCTTTTCCACCAATTCCCCCCCGCCGGAGACTCGCCTTCCGGAATAATCTACGGCGATTACGACGGCAGCAGCGCTGAGCTTCCGCCATTTCCTCCGGCAATTTCGTCCGAATCGGAGAATTGTGATTACAATAATTACGGTGCGATGGAATCACAGAACGTTGGATTTGAATGCTTTGATCAATCGTCGATTGGAATGGGGTCGTGTTTGGGATTCGATTCGAGTGGTGATTATATGTATAATCCGATGTTGGGTTCGATGGCGACGGTTTCCGACGCCGGCACCGGTGATCTTCAGTCCCCGGCGGCTAATTTCTATTTGCCTCAGTCTTCAGAGTATTGA

Protein sequence

MSPSPSKPKRKHHPPPPAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAIAYDRAARSLRGSLARTNFLYSDSPPPPPPPYSASIHPSQPPLFLPLLPPPPPPLFHQFPPAGDSPSGIIYGDYDGSSAELPPFPPAISSESENCDYNNYGAMESQNVGFECFDQSSIGMGSCLGFDSSGDYMYNPMLGSMATVSDAGTGDLQSPAANFYLPQSSEY

Homology

[Close]

BLAST of IVF0002839 vs. ExPASy Swiss-Prot
Match: Q9M644 (Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana OX=3702 GN=LEP PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.6e-30
Identity = 96/223 (43.05%), Postives = 125/223 (56.05%), Query Frame = 0


Query: 1   MSPSPSKPKRKHHPPPPAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA 60
           M+ + SK K+K       +    RFLGVRRRPWGRYAAEIRDP+TKERHWLGTFDTAEEA
Sbjct: 1   MNTTSSKSKKKQD-----DQVGTRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEA 60

Query: 61  AIAYDRAARSLRGSLARTNFLYSDSPPPPPPPYSASIHPSQPPLFLPLLPPPPPPLFHQF 120
           A+AYDRAARS+RG+ ARTNF+YSD   PP    ++ + P  PP      PPPPPP     
Sbjct: 61  ALAYDRAARSMRGTRARTNFVYSDM--PPSSSVTSIVSPDDPP------PPPPPPA---- 120

Query: 121 PPAGDSPS-GIIYGDYDGSSAELPPFPPAI----------SSESENCDYNNYGAME---- 180
           PP+ D     +++  Y  SS + P   P            S  S +  Y+N  + E    
Sbjct: 121 PPSNDPVDYMMMFNQY--SSTDSPMLQPHCDQVDSYMFGGSQSSNSYCYSNDSSNELPPL 180

Query: 181 SQNVGFECFDQSSIGMGSCLGFDSSGDYMYNPMLGSMATVSDA 209
             ++   C+ Q      +  G D S +Y+++PM   M  VSD+
Sbjct: 181 PSDLSNSCYSQP---QWTWTGDDYSSEYVHSPMFSRMPPVSDS 201

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BLAST of IVF0002839 vs. ExPASy Swiss-Prot
Match: Q6J9Q2 (Ethylene-responsive transcription factor ERF086 OS=Arabidopsis thaliana OX=3702 GN=ERF086 PE=1 SV=2)

HSP 1 Score: 114.8 bits (286), Expect = 1.3e-24
Identity = 52/62 (83.87%), Postives = 58/62 (93.55%), Query Frame = 0


Query: 22  PHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAIAYDRAARSLRGSLARTNFL 81
           P RFLGVRRRPWGRYAAEIRDP+TKERHWLGTFDTA EAA+AYDRAA S+RG+ ARTNF+
Sbjct: 52  PGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMRGTQARTNFV 111

Query: 82  YS 84
           Y+
Sbjct: 112 YT 113

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BLAST of IVF0002839 vs. ExPASy Swiss-Prot
Match: Q8H3Q1 (Ethylene-responsive transcription factor FZP OS=Oryza sativa subsp. japonica OX=39947 GN=FZP PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.9e-23
Identity = 68/150 (45.33%), Postives = 85/150 (56.67%), Query Frame = 0


Query: 8   PKRKHHPPPPAEP---------------TPHRFLGVRRRPWGRYAAEIRDPSTKERHWLG 67
           PK    P PP+ P                P RFLGVRRRPWGRYAAEIRDP+TKERHWLG
Sbjct: 26  PKPASQPSPPSSPMSERPPSGRSRRRAQEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLG 85

Query: 68  TFDTAEEAAIAYDRAARSLRGSLARTNFLYSDSPPPPPPPYSASIHPSQPPLFLPLLPPP 127
           TFDTA+EAA+AYDRAA S++G+ ARTNF+Y+ +              + PP   P   P 
Sbjct: 86  TFDTAQEAALAYDRAALSMKGAQARTNFVYTHAA------------YNYPPFLAPFHAP- 145

Query: 128 PPPLFHQFPPAGDSPSGIIYGDYDGSSAEL 143
                 Q+  A  +PS + YG   G++  +
Sbjct: 146 ------QYAAAAAAPSSVQYGGGVGAAPHI 156

[Close]

BLAST of IVF0002839 vs. ExPASy Swiss-Prot
Match: Q3E703 (Ethylene-responsive transcription factor ERF088 OS=Arabidopsis thaliana OX=3702 GN=ERF088 PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.2e-22
Identity = 53/78 (67.95%), Postives = 60/78 (76.92%), Query Frame = 0


Query: 24  RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAIAYDRAARSLRGSLARTNFLYS 83
           ++LGVRRRPWGRYAAEIR+P TKERHWLGTFDTAEEAA AYD AARS+ GSLA TNF Y+
Sbjct: 20  KYLGVRRRPWGRYAAEIRNPFTKERHWLGTFDTAEEAAFAYDVAARSISGSLATTNFFYT 79

Query: 84  DSPPPPPPPYSASIHPSQ 102
           ++        S   HP Q
Sbjct: 80  ENT-------SLERHPQQ 90

[Close]

BLAST of IVF0002839 vs. ExPASy Swiss-Prot
Match: Q9FZ90 (Ethylene-responsive transcription factor ERF087 OS=Arabidopsis thaliana OX=3702 GN=ERF087 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 7.9e-22
Identity = 71/166 (42.77%), Postives = 96/166 (57.83%), Query Frame = 0


Query: 7   KPKRKHHPPPPAEPTPH----RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAI 66
           K  R+    P  +P  H    +++GVRRRPWGRYAAEIR+P+TKER+WLGTFDTAEEAA+
Sbjct: 17  KSHRQKQQQPQPQPQQHIEEIKYVGVRRRPWGRYAAEIRNPTTKERYWLGTFDTAEEAAL 76

Query: 67  AYDRAARSLRGSLARTNFLYSDSPPPPPPPYSASIHPSQPPLFLPLLPPPPPPL------ 126
           AYDRAARS+RG  ARTNF+YSD   P     ++ + P +   F+  L  PP  L      
Sbjct: 77  AYDRAARSIRGLTARTNFVYSDM--PRGSSVTSFVSPDESQRFISELFNPPSQLEATNSN 136

Query: 127 ----FHQFPPAGDSPSGIIYGDYDGSSAELPPFPPAISSESENCDY 159
                + +    +     I   Y+G   E      +I+S +E+CD+
Sbjct: 137 NNNNNNLYSSTNNQNQNSIEFSYNGWPQEAECGYQSITSNAEHCDH 180

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BLAST of IVF0002839 vs. ExPASy TrEMBL
Match: A0A5A7VFL7 (Ethylene-responsive transcription factor LEP OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G00060 PE=4 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 3.2e-127
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0


Query: 1   MSPSPSKPKRKHHPPPPAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA 60
           MSPSPSKPKRKHHPPPPAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA
Sbjct: 1   MSPSPSKPKRKHHPPPPAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA 60

Query: 61  AIAYDRAARSLRGSLARTNFLYSDSPPPPPPPYSASIHPSQPPLFLPLLPPPPPPLFHQF 120
           AIAYDRAARSLRGSLARTNFLYSDSPPPPPPPYSASIHPSQPPLFLPLLPPPPPPLFHQF
Sbjct: 61  AIAYDRAARSLRGSLARTNFLYSDSPPPPPPPYSASIHPSQPPLFLPLLPPPPPPLFHQF 120

Query: 121 PPAGDSPSGIIYGDYDGSSAELPPFPPAISSESENCDYNNYGAMESQNVGFECFDQSSIG 180
           PPAGDSPSGIIYGDYDGSSAELPPFPPAISSESENCDYNNYGAMESQNVGFECFDQSSIG
Sbjct: 121 PPAGDSPSGIIYGDYDGSSAELPPFPPAISSESENCDYNNYGAMESQNVGFECFDQSSIG 180

Query: 181 MGSCLGFDSSGDYMYNPMLGSMATVSDAGTGDLQSPAANFYLPQSSEY 229
           MGSCLGFDSSGDYMYNPMLGSMATVSDAGTGDLQSPAANFYLPQSSEY
Sbjct: 181 MGSCLGFDSSGDYMYNPMLGSMATVSDAGTGDLQSPAANFYLPQSSEY 228

[Close]

BLAST of IVF0002839 vs. ExPASy TrEMBL
Match: A0A1S3AU89 (ethylene-responsive transcription factor LEP OS=Cucumis melo OX=3656 GN=LOC103483013 PE=4 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 1.0e-117
Identity = 216/224 (96.43%), Postives = 217/224 (96.88%), Query Frame = 0


Query: 5   PSKPKRKHHPPPPAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAIAY 64
           P  PK +   P PAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAIAY
Sbjct: 5   PQNPK-ESTTPAPAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAIAY 64

Query: 65  DRAARSLRGSLARTNFLYSDSPPPPPPPYSASIHPSQPPLFLPLLPPPPPPLFHQFPPAG 124
           DRAARSLRGSLARTNFLYSDSPPPPPPPYSASIHPSQPPLFLPLLPPPPPPLFHQFPPAG
Sbjct: 65  DRAARSLRGSLARTNFLYSDSPPPPPPPYSASIHPSQPPLFLPLLPPPPPPLFHQFPPAG 124

Query: 125 DSPSGIIYGDYDGSSAELPPFPPAISSESENCDYNNYGAMESQNVGFECFDQSSIGMGSC 184
           DSPSGIIYGDYDGSSAELPPFPPAISSESENCDYNNYGAMESQNVGFECFDQSSIGMGSC
Sbjct: 125 DSPSGIIYGDYDGSSAELPPFPPAISSESENCDYNNYGAMESQNVGFECFDQSSIGMGSC 184

Query: 185 LGFDSSGDYMYNPMLGSMATVSDAGTGDLQSPAANFYLPQSSEY 229
           LGFDSSGDYMYNPMLGSMATVSDAGTGDLQSPAANFYLPQSSEY
Sbjct: 185 LGFDSSGDYMYNPMLGSMATVSDAGTGDLQSPAANFYLPQSSEY 227

[Close]

BLAST of IVF0002839 vs. ExPASy TrEMBL
Match: A0A6J1JQK9 (ethylene-responsive transcription factor LEP-like OS=Cucurbita maxima OX=3661 GN=LOC111487448 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 5.6e-79
Identity = 166/228 (72.81%), Postives = 178/228 (78.07%), Query Frame = 0


Query: 1   MSPSPSKPKRKHHPPPPAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA 60
           MSPSPSKPKRK   PPP E T HRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA
Sbjct: 1   MSPSPSKPKRKQQQPPP-ETTSHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA 60

Query: 61  AIAYDRAARSLRGSLARTNFLYSDSPPPPPPPYSASIHPSQPPLFLPLLPPPPPPLFHQF 120
           A+AYD AARSLRGSLARTNFLYSDS PPPPPP SA++ P+Q PL L    P PPP FHQ 
Sbjct: 61  AVAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLL----PTPPPHFHQI 120

Query: 121 PPAGDSPSGIIYGDYDGSSAELPPFPPAISSESENCDYN---NYGAMESQNVGFECFDQS 180
           PP+ DSP  +   D DG  AELPPFPPAISSESEN +YN   N G ME QN GFE FDQS
Sbjct: 121 PPSRDSPPSLFSVDGDG-GAELPPFPPAISSESENYNYNYNYNQGLMELQNSGFEYFDQS 180

Query: 181 SIGMGSCLGFDSSGDYMYNPMLGSMATVSDAGTGDLQSPAANFYLPQS 226
           S  +GSC GFDSS +Y++ P+  SM  VSDAG GD  SPAANFY PQS
Sbjct: 181 STEIGSCFGFDSSSEYVHGPIFSSMPAVSDAGAGDFPSPAANFYFPQS 222

[Close]

BLAST of IVF0002839 vs. ExPASy TrEMBL
Match: A0A6J1HKV8 (ethylene-responsive transcription factor LEP-like OS=Cucurbita moschata OX=3662 GN=LOC111463929 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 8.1e-78
Identity = 164/232 (70.69%), Postives = 178/232 (76.72%), Query Frame = 0


Query: 1   MSPSPSKPKRKHHPPPPAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA 60
           MSPSPSKPKRK   PPP E TPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA
Sbjct: 1   MSPSPSKPKRKQQQPPP-ETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA 60

Query: 61  AIAYDRAARSLRGSLARTNFLYSDSPPPPPPPYSASIHPSQPPLFLPLLPPPPPPLFHQF 120
           A+AYD AARSLRGSLARTNFLYSDS PPPPPP SA++ P+Q PL L    P PPP FHQ 
Sbjct: 61  AVAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLL----PTPPPHFHQI 120

Query: 121 PPAGDSPSGIIYGDYDGSSAELPPFPPAISSESENCDYN-------NYGAMESQNVGFEC 180
           PP+ DSP  +   D DG  AELPPFPPAISSESEN +YN       N G ME QN GFE 
Sbjct: 121 PPSRDSPPSLFSVDGDG-GAELPPFPPAISSESENYNYNYNYNYNYNQGLMELQNSGFEY 180

Query: 181 FDQSSIGMGSCLGFDSSGDYMYNPMLGSMATVSDAGTGDLQSPAANFYLPQS 226
           F+QS   +GSC GFDSS +Y++ P+  SM  VSDAG G+  SPAANFY PQS
Sbjct: 181 FNQSPTEIGSCFGFDSSSEYVHGPIFSSMPAVSDAGAGEFPSPAANFYFPQS 226

[Close]

BLAST of IVF0002839 vs. ExPASy TrEMBL
Match: A0A6J1CKI8 (ethylene-responsive transcription factor LEP OS=Momordica charantia OX=3673 GN=LOC111011985 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 3.2e-74
Identity = 160/226 (70.80%), Postives = 175/226 (77.43%), Query Frame = 0


Query: 1   MSPSPSKPKRKHHPPPPAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA 60
           MSPSPSKPKRK  PPPP E   HRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA
Sbjct: 1   MSPSPSKPKRK-QPPPPPETASHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA 60

Query: 61  AIAYDRAARSLRGSLARTNFLYSDSPPPPPPPYSAS-----IHPSQPPLFLPLLPPPPPP 120
           A+AYDRAARSLRGSLARTNFLYSDSPPP PP  + S       P  PPLFLPLLPP  PP
Sbjct: 61  ALAYDRAARSLRGSLARTNFLYSDSPPPLPPSAAVSHGQLPPPPLPPPLFLPLLPPDSPP 120

Query: 121 LFHQFPPAGDSPSGIIYGDYDGSSAELPPFPPAISSESENCDYNNYGAMESQNVGFECFD 180
           LF QFP AGDS S   +  +D   AELPPFPPAISSESEN +YNN   ME+QN+G E  D
Sbjct: 121 LFDQFPAAGDS-SASFFAGFDDGGAELPPFPPAISSESENYNYNNC-LMETQNIGLESLD 180

Query: 181 QSSIGMGSCLGFDSSGDYMYNPMLGSMATVSDAGTGDLQSPAANFY 222
           QSS+G+GS  GFDS G+Y+ +P+ G+M  VSDA   D +SP ANFY
Sbjct: 181 QSSMGIGSYFGFDSGGEYVQSPIFGTMPAVSDALASDFESP-ANFY 222

[Close]

BLAST of IVF0002839 vs. NCBI nr
Match: KAA0066104.1 (ethylene-responsive transcription factor LEP [Cucumis melo var. makuwa] >TYK15143.1 ethylene-responsive transcription factor LEP [Cucumis melo var. makuwa])

HSP 1 Score: 465 bits (1197), Expect = 1.89e-165
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0


Query: 1   MSPSPSKPKRKHHPPPPAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA 60
           MSPSPSKPKRKHHPPPPAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA
Sbjct: 1   MSPSPSKPKRKHHPPPPAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA 60

Query: 61  AIAYDRAARSLRGSLARTNFLYSDSPPPPPPPYSASIHPSQPPLFLPLLPPPPPPLFHQF 120
           AIAYDRAARSLRGSLARTNFLYSDSPPPPPPPYSASIHPSQPPLFLPLLPPPPPPLFHQF
Sbjct: 61  AIAYDRAARSLRGSLARTNFLYSDSPPPPPPPYSASIHPSQPPLFLPLLPPPPPPLFHQF 120

Query: 121 PPAGDSPSGIIYGDYDGSSAELPPFPPAISSESENCDYNNYGAMESQNVGFECFDQSSIG 180
           PPAGDSPSGIIYGDYDGSSAELPPFPPAISSESENCDYNNYGAMESQNVGFECFDQSSIG
Sbjct: 121 PPAGDSPSGIIYGDYDGSSAELPPFPPAISSESENCDYNNYGAMESQNVGFECFDQSSIG 180

Query: 181 MGSCLGFDSSGDYMYNPMLGSMATVSDAGTGDLQSPAANFYLPQSSEY 228
           MGSCLGFDSSGDYMYNPMLGSMATVSDAGTGDLQSPAANFYLPQSSEY
Sbjct: 181 MGSCLGFDSSGDYMYNPMLGSMATVSDAGTGDLQSPAANFYLPQSSEY 228

[Close]

BLAST of IVF0002839 vs. NCBI nr
Match: XP_008437672.1 (PREDICTED: ethylene-responsive transcription factor LEP [Cucumis melo])

HSP 1 Score: 435 bits (1119), Expect = 1.42e-153
Identity = 213/214 (99.53%), Postives = 213/214 (99.53%), Query Frame = 0


Query: 15  PPPAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAIAYDRAARSLRGS 74
           P PAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAIAYDRAARSLRGS
Sbjct: 14  PAPAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAIAYDRAARSLRGS 73

Query: 75  LARTNFLYSDSPPPPPPPYSASIHPSQPPLFLPLLPPPPPPLFHQFPPAGDSPSGIIYGD 134
           LARTNFLYSDSPPPPPPPYSASIHPSQPPLFLPLLPPPPPPLFHQFPPAGDSPSGIIYGD
Sbjct: 74  LARTNFLYSDSPPPPPPPYSASIHPSQPPLFLPLLPPPPPPLFHQFPPAGDSPSGIIYGD 133

Query: 135 YDGSSAELPPFPPAISSESENCDYNNYGAMESQNVGFECFDQSSIGMGSCLGFDSSGDYM 194
           YDGSSAELPPFPPAISSESENCDYNNYGAMESQNVGFECFDQSSIGMGSCLGFDSSGDYM
Sbjct: 134 YDGSSAELPPFPPAISSESENCDYNNYGAMESQNVGFECFDQSSIGMGSCLGFDSSGDYM 193

Query: 195 YNPMLGSMATVSDAGTGDLQSPAANFYLPQSSEY 228
           YNPMLGSMATVSDAGTGDLQSPAANFYLPQSSEY
Sbjct: 194 YNPMLGSMATVSDAGTGDLQSPAANFYLPQSSEY 227

[Close]

BLAST of IVF0002839 vs. NCBI nr
Match: KAE8648382.1 (hypothetical protein Csa_023201, partial [Cucumis sativus])

HSP 1 Score: 343 bits (881), Expect = 4.27e-117
Identity = 182/228 (79.82%), Postives = 192/228 (84.21%), Query Frame = 0


Query: 9   KRKHHPPPPAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAIAYDRAA 68
           ++K  PPPPAE TPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAE+AAIAYDRAA
Sbjct: 22  QKKAPPPPPAESTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDAAIAYDRAA 81

Query: 69  RSLRGSLARTNFLYSDSPPPPPPPYSASIH-PSQPPLFLP-------LLPPPPPPLFHQF 128
           RSLRGSLARTNFLYSDSPPPPPP YSASIH P+QPPLF         L  PP        
Sbjct: 82  RSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLFSSSASTHSSLSSPP-------I 141

Query: 129 PPAGDSPSGIIYGDYDGSSAELPPFPPAISSESENCDYNNYGAMESQNVGFECFDQSSIG 188
           PPAGDS SGII GDYD +SAELPPF PAISSES +CDYNNYG MESQNVGFECFDQSSIG
Sbjct: 142 PPAGDSLSGIISGDYD-ASAELPPFLPAISSESVDCDYNNYGVMESQNVGFECFDQSSIG 201

Query: 189 MGSCLGFDSSGDYMYNPMLGSMATVSDAGTGDLQSPAANFYLPQSSEY 228
           +GSCLGFDSS DY+YNPMLGSM TVSD G GD +SPA NFYLPQSS+Y
Sbjct: 202 IGSCLGFDSSSDYIYNPMLGSMPTVSDVGAGDFESPAGNFYLPQSSDY 241

[Close]

BLAST of IVF0002839 vs. NCBI nr
Match: XP_004151396.2 (ethylene-responsive transcription factor LEP-like [Cucumis sativus])

HSP 1 Score: 343 bits (881), Expect = 5.45e-117
Identity = 182/228 (79.82%), Postives = 192/228 (84.21%), Query Frame = 0


Query: 9   KRKHHPPPPAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAIAYDRAA 68
           ++K  PPPPAE TPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAE+AAIAYDRAA
Sbjct: 29  QKKAPPPPPAESTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEDAAIAYDRAA 88

Query: 69  RSLRGSLARTNFLYSDSPPPPPPPYSASIH-PSQPPLFLP-------LLPPPPPPLFHQF 128
           RSLRGSLARTNFLYSDSPPPPPP YSASIH P+QPPLF         L  PP        
Sbjct: 89  RSLRGSLARTNFLYSDSPPPPPPLYSASIHHPNQPPLFSSSASTHSSLSSPP-------I 148

Query: 129 PPAGDSPSGIIYGDYDGSSAELPPFPPAISSESENCDYNNYGAMESQNVGFECFDQSSIG 188
           PPAGDS SGII GDYD +SAELPPF PAISSES +CDYNNYG MESQNVGFECFDQSSIG
Sbjct: 149 PPAGDSLSGIISGDYD-ASAELPPFLPAISSESVDCDYNNYGVMESQNVGFECFDQSSIG 208

Query: 189 MGSCLGFDSSGDYMYNPMLGSMATVSDAGTGDLQSPAANFYLPQSSEY 228
           +GSCLGFDSS DY+YNPMLGSM TVSD G GD +SPA NFYLPQSS+Y
Sbjct: 209 IGSCLGFDSSSDYIYNPMLGSMPTVSDVGAGDFESPAGNFYLPQSSDY 248

[Close]

BLAST of IVF0002839 vs. NCBI nr
Match: XP_023541749.1 (ethylene-responsive transcription factor LEP-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 307 bits (787), Expect = 4.47e-103
Identity = 166/228 (72.81%), Postives = 179/228 (78.51%), Query Frame = 0


Query: 1   MSPSPSKPKRKHHPPPPAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA 60
           MSPSPSKPKRK   PPP E TPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA
Sbjct: 1   MSPSPSKPKRKQQQPPP-ETTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA 60

Query: 61  AIAYDRAARSLRGSLARTNFLYSDSPPPPPPPYSASIHPSQPPLFLPLLPPPPPPLFHQF 120
           A+AYD AARSLRGSLARTNFLYSDS PPPPPP SA++ P+Q PL LP     PPP FHQ 
Sbjct: 61  AVAYDCAARSLRGSLARTNFLYSDSLPPPPPPPSAALPPNQAPLLLPT----PPPHFHQI 120

Query: 121 PPAGDSPSGIIYGDYDGSSAELPPFPPAISSESENCDYN---NYGAMESQNVGFECFDQS 180
           PP+ DSP  +   D DG  AELPPFPPAISSESEN +YN   N G ME QN GFE FDQS
Sbjct: 121 PPSRDSPPSLFSVDGDGG-AELPPFPPAISSESENYNYNYNYNQGLMELQNSGFEYFDQS 180

Query: 181 SIGMGSCLGFDSSGDYMYNPMLGSMATVSDAGTGDLQSPAANFYLPQS 225
              +GSC GFDSS +Y++ P+ GSM  VSDAG G+  SPAANFY PQS
Sbjct: 181 PTDIGSCFGFDSSSEYVHGPIFGSMPAVSDAGAGEFLSPAANFYFPQS 222

[Close]

BLAST of IVF0002839 vs. TAIR 10
Match: AT5G13910.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 133.3 bits (334), Expect = 2.5e-31
Identity = 96/223 (43.05%), Postives = 125/223 (56.05%), Query Frame = 0


Query: 1   MSPSPSKPKRKHHPPPPAEPTPHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEA 60
           M+ + SK K+K       +    RFLGVRRRPWGRYAAEIRDP+TKERHWLGTFDTAEEA
Sbjct: 1   MNTTSSKSKKKQD-----DQVGTRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAEEA 60

Query: 61  AIAYDRAARSLRGSLARTNFLYSDSPPPPPPPYSASIHPSQPPLFLPLLPPPPPPLFHQF 120
           A+AYDRAARS+RG+ ARTNF+YSD   PP    ++ + P  PP      PPPPPP     
Sbjct: 61  ALAYDRAARSMRGTRARTNFVYSDM--PPSSSVTSIVSPDDPP------PPPPPPA---- 120

Query: 121 PPAGDSPS-GIIYGDYDGSSAELPPFPPAI----------SSESENCDYNNYGAME---- 180
           PP+ D     +++  Y  SS + P   P            S  S +  Y+N  + E    
Sbjct: 121 PPSNDPVDYMMMFNQY--SSTDSPMLQPHCDQVDSYMFGGSQSSNSYCYSNDSSNELPPL 180

Query: 181 SQNVGFECFDQSSIGMGSCLGFDSSGDYMYNPMLGSMATVSDA 209
             ++   C+ Q      +  G D S +Y+++PM   M  VSD+
Sbjct: 181 PSDLSNSCYSQP---QWTWTGDDYSSEYVHSPMFSRMPPVSDS 201

[Close]

BLAST of IVF0002839 vs. TAIR 10
Match: AT5G18560.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 114.8 bits (286), Expect = 9.3e-26
Identity = 52/62 (83.87%), Postives = 58/62 (93.55%), Query Frame = 0


Query: 22  PHRFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAIAYDRAARSLRGSLARTNFL 81
           P RFLGVRRRPWGRYAAEIRDP+TKERHWLGTFDTA EAA+AYDRAA S+RG+ ARTNF+
Sbjct: 52  PGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAHEAALAYDRAALSMRGTQARTNFV 111

Query: 82  YS 84
           Y+
Sbjct: 112 YT 113

[Close]

BLAST of IVF0002839 vs. TAIR 10
Match: AT1G12890.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 108.2 bits (269), Expect = 8.7e-24
Identity = 53/78 (67.95%), Postives = 60/78 (76.92%), Query Frame = 0


Query: 24  RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAIAYDRAARSLRGSLARTNFLYS 83
           ++LGVRRRPWGRYAAEIR+P TKERHWLGTFDTAEEAA AYD AARS+ GSLA TNF Y+
Sbjct: 20  KYLGVRRRPWGRYAAEIRNPFTKERHWLGTFDTAEEAAFAYDVAARSISGSLATTNFFYT 79

Query: 84  DSPPPPPPPYSASIHPSQ 102
           ++        S   HP Q
Sbjct: 80  ENT-------SLERHPQQ 90

[Close]

BLAST of IVF0002839 vs. TAIR 10
Match: AT1G28160.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 105.5 bits (262), Expect = 5.6e-23
Identity = 71/166 (42.77%), Postives = 96/166 (57.83%), Query Frame = 0


Query: 7   KPKRKHHPPPPAEPTPH----RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAI 66
           K  R+    P  +P  H    +++GVRRRPWGRYAAEIR+P+TKER+WLGTFDTAEEAA+
Sbjct: 17  KSHRQKQQQPQPQPQQHIEEIKYVGVRRRPWGRYAAEIRNPTTKERYWLGTFDTAEEAAL 76

Query: 67  AYDRAARSLRGSLARTNFLYSDSPPPPPPPYSASIHPSQPPLFLPLLPPPPPPL------ 126
           AYDRAARS+RG  ARTNF+YSD   P     ++ + P +   F+  L  PP  L      
Sbjct: 77  AYDRAARSIRGLTARTNFVYSDM--PRGSSVTSFVSPDESQRFISELFNPPSQLEATNSN 136

Query: 127 ----FHQFPPAGDSPSGIIYGDYDGSSAELPPFPPAISSESENCDY 159
                + +    +     I   Y+G   E      +I+S +E+CD+
Sbjct: 137 NNNNNNLYSSTNNQNQNSIEFSYNGWPQEAECGYQSITSNAEHCDH 180

[Close]

BLAST of IVF0002839 vs. TAIR 10
Match: AT1G24590.1 (DORNROSCHEN-like )

HSP 1 Score: 99.0 bits (245), Expect = 5.3e-21
Identity = 56/86 (65.12%), Postives = 63/86 (73.26%), Query Frame = 0


Query: 24  RFLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAAIAYDRAARSLRGSLARTNFLYS 83
           R+ GVRRRPWGRYAAEIRDP +KER WLGTFDTAEEAA AYD AAR++RG  ARTNF+Y 
Sbjct: 57  RYRGVRRRPWGRYAAEIRDPLSKERRWLGTFDTAEEAACAYDCAARAMRGLKARTNFVY- 116

Query: 84  DSPPPPPPPYSASIHPSQPPLFLPLL 110
             P P    Y   I  S PP+ + LL
Sbjct: 117 --PMPSLDSYHHRIF-SSPPMNMFLL 138

The following BLAST results are available for this feature:

BLAST of IVF0002839 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M644	3.6e-30	43.05	Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q6J9Q2	1.3e-24	83.87	Ethylene-responsive transcription factor ERF086 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8H3Q1	1.9e-23	45.33	Ethylene-responsive transcription factor FZP OS=Oryza sativa subsp. japonica OX=...	[more]
Q3E703	1.2e-22	67.95	Ethylene-responsive transcription factor ERF088 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9FZ90	7.9e-22	42.77	Ethylene-responsive transcription factor ERF087 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of IVF0002839 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VFL7	3.2e-127	100.00	Ethylene-responsive transcription factor LEP OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A1S3AU89	1.0e-117	96.43	ethylene-responsive transcription factor LEP OS=Cucumis melo OX=3656 GN=LOC10348...	[more]
A0A6J1JQK9	5.6e-79	72.81	ethylene-responsive transcription factor LEP-like OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1HKV8	8.1e-78	70.69	ethylene-responsive transcription factor LEP-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1CKI8	3.2e-74	70.80	ethylene-responsive transcription factor LEP OS=Momordica charantia OX=3673 GN=L...	[more]

BLAST of IVF0002839 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0066104.1	1.89e-165	100.00	ethylene-responsive transcription factor LEP [Cucumis melo var. makuwa] >TYK1514...	[more]
XP_008437672.1	1.42e-153	99.53	PREDICTED: ethylene-responsive transcription factor LEP [Cucumis melo]	[more]
KAE8648382.1	4.27e-117	79.82	hypothetical protein Csa_023201, partial [Cucumis sativus]	[more]
XP_004151396.2	5.45e-117	79.82	ethylene-responsive transcription factor LEP-like [Cucumis sativus]	[more]
XP_023541749.1	4.47e-103	72.81	ethylene-responsive transcription factor LEP-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of IVF0002839 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13910.1	2.5e-31	43.05	Integrase-type DNA-binding superfamily protein	[more]
AT5G18560.1	9.3e-26	83.87	Integrase-type DNA-binding superfamily protein	[more]
AT1G12890.1	8.7e-24	67.95	Integrase-type DNA-binding superfamily protein	[more]
AT1G28160.1	5.6e-23	42.77	Integrase-type DNA-binding superfamily protein	[more]
AT1G24590.1	5.3e-21	65.12	DORNROSCHEN-like	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 25..36 score: 53.33 coord: 47..63 score: 68.88
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 24..87 e-value: 5.0E-34 score: 129.1
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 27..73 e-value: 1.8E-12 score: 47.3
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 24..81 score: 20.468195
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 24..80 e-value: 1.84702E-30 score: 105.431
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 23..82 e-value: 1.5E-24 score: 87.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	PANTHER	PTHR31677:SF118	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR LEP	coord: 13..87
None	No IPR available	PANTHER	PTHR31677	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 13..87
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 25..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0002839.2	IVF0002839.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity