IVF0002805 (gene) Melon (IVF77) v1

Overview
NameIVF0002805
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr04: 31736987 .. 31738423 (-)
RNA-Seq ExpressionIVF0002805
SyntenyIVF0002805
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCTTAATCACCTCAATCTTGAGAAGTTATGGCGAAGTAGAAATGCGAGACAAGAATTGCTATTTCTTTCCTCTTTTTCTAAATTTGGTTACAAAAAGTAAAATATAAAGATTTGATTTTTTTTCAAAATAATGGTAAAAAAGATAGACTTTCTAGAAAAAGATAAGCTCTCTATACATAATATTATACGGTAAGATTAAACTAAAGGTTTCCTCAATTTCTCTACAAATAGAACATTGGAAGGTTGCATAACATTTACACAGAAGTAGGAAAATGGGAGGGCATTAACACTTACACGGGAGTACGAAAATGGGCGGGGCAGTTGGGCTTCGACCTTAACATCTATGTCATTTGTGGTGATATAATAATCTTCTATTTTGGTAACTTTTTCAAAATTATCCTTGAATTTAAGGAACAAAGAAAATTAATTTGATCCTTATTGTTAGAGTTTCTGTAACTCTCTAACCGAGTAATGTGAGATTTTAGATTTATCGTACTAATTATATCGATTAATTGTGAAAGTATTCATTTGCAATTTTTAGAGTTTTATTTTTATGAATGAGTTGTTCTTAATTTTATTTTTTTAGTTTTATTTTCTCTTCTCATGGATATTAACTCTAACATACAAATTTTATTTTATTTTTTATTCTATCTTATGTTTTGTTTGAAGATTTTGGGAAGGGAAAGAAAATTGTTTTAAAAAATATTTGAGGTGTTTGGTTAATTTTATAAAATATGTTTTTTAAAAAATTGAGAATGAAAAATAATACAAGAATACACTCAATATTAAATGGTAAGGAAATAGACTTTTAAACAAAATATCGTAAATCTAAAGCATATAGCGTTTTATTTTGAAAAATATTCCTTTCATTAGATAATTGATAGATAATTGAAAAGCATTCTTAATTCTAGAAGAAAAAAAATGGGTTTTTGATTTATTTAGCACAAAACATTTAATTCAATCTCGATGACTAAAGGTGTTATCGGATGTAATAATTTGCAACGAAGTTTCAATTTCCATTATTTTTATCGGCCTTTGCCTGTTCGCGCCTTCGTTTCTGCCTTAGGGTTTGGCACCAAGTTAGTGGAGTGGTGATCTCCAGCGGATTTGCCCAAAAATCTTCTCCTCTCCATTTCCGCCACTGTCATATCAGTCTTCAATTGCTCCAACGCCTCAGGCATAATTTGGCTCCTCACCGGAAACTTGCGGTTCCTGTCTGTTGCGTACTATCAAATTCTAGGTAAGTTCGAATATGAAGTTTTTGTCAAATTTCTTCTGATTAGAGTTCGATTTGTATACTATTTGCTTTGATTCTTTTCTGGAAGATAAAAGATCCGAAATGTCAACCGAAAATTTTATATTTGCCAACTTCGAGTTTAATTCATTATAGAATTTTCGATGATGCAGTTCCTGACCCCTCAATTCACACTTGA

mRNA sequence

ATGACCTTAATCACCTCAATCTTGAGAAGTTATGGCGAAGTAGAAATGCGAGACAAGAATTGCTATTTCTTTCCTCTTTTTCTAAATTTGGTTACAAAAAGCATAATTTGGCTCCTCACCGGAAACTTGCGGTTCCTGTCTGTTGCGTACTATCAAATTCTAGTTCCTGACCCCTCAATTCACACTTGA

Coding sequence (CDS)

ATGACCTTAATCACCTCAATCTTGAGAAGTTATGGCGAAGTAGAAATGCGAGACAAGAATTGCTATTTCTTTCCTCTTTTTCTAAATTTGGTTACAAAAAGCATAATTTGGCTCCTCACCGGAAACTTGCGGTTCCTGTCTGTTGCGTACTATCAAATTCTAGTTCCTGACCCCTCAATTCACACTTGA

Protein sequence

MTLITSILRSYGEVEMRDKNCYFFPLFLNLVTKSIIWLLTGNLRFLSVAYYQILVPDPSIHT
Homology
[Close]
BLAST of IVF0002805 vs. ExPASy TrEMBL
Match: A0A0A0L9W6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G731760 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.2e-05
Identity = 29/41 (70.73%), Postives = 33/41 (80.49%), Query Frame = 0 

Query: 25 PLFLN---LVTKSIIWLLTGNLRFLSVAYYQILVPDPSIHT 63
          PLF++    V + IIWLLTGNLRFLSVAYYQILVPD  +HT
Sbjct: 31 PLFMDGSGKVFEGIIWLLTGNLRFLSVAYYQILVPDFPVHT 71

[Close]
BLAST of IVF0002805 vs. NCBI nr
Match: KGN58765.1 (hypothetical protein Csa_002170 [Cucumis sativus])

HSP 1 Score: 56.2 bits (134), Expect = 1.39e-08
Identity = 30/53 (56.60%), Postives = 36/53 (67.92%), Query Frame = 0 

Query: 13 EVEMRDKNCYFFPLFLN---LVTKSIIWLLTGNLRFLSVAYYQILVPDPSIHT 62
          +   R  +    PLF++    V + IIWLLTGNLRFLSVAYYQILVPD  +HT
Sbjct: 19 KTRARADSVGLIPLFMDGSGKVFEGIIWLLTGNLRFLSVAYYQILVPDFPVHT 71

The following BLAST results are available for this feature:
BLAST of IVF0002805 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0002805 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L9W63.2e-0570.73Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G731760 PE=4 SV=1[more]
BLAST of IVF0002805 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN58765.11.39e-0856.60hypothetical protein Csa_002170 [Cucumis sativus][more]
BLAST of IVF0002805 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0002805.1IVF0002805.1mRNA