IVF0002781 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAATGAAGAAGATCGCTTGCGCTGCTCTTTTCGCCGCTGCTGCCGTCAGCGCCGCGGTGGCTGCAGACGAGTCTATCTCTCCCGCCGCCGCCCCAGGGCCGAGCAGCGCCGCCTCCGCAGCTCTCCCCGTTCTCGGTGCCTCAGTTGTTTCCTTTGTTGCTGCTTACTTCTTGAACTGA ATGGAAATGAAGAAGATCGCTTGCGCTGCTCTTTTCGCCGCTGCTGCCGTCAGCGCCGCGGTGGCTGCAGACGAGTCTATCTCTCCCGCCGCCGCCCCAGGGCCGAGCAGCGCCGCCTCCGCAGCTCTCCCCGTTCTCGGTGCCTCAGTTGTTTCCTTTGTTGCTGCTTACTTCTTGAACTGA ATGGAAATGAAGAAGATCGCTTGCGCTGCTCTTTTCGCCGCTGCTGCCGTCAGCGCCGCGGTGGCTGCAGACGAGTCTATCTCTCCCGCCGCCGCCCCAGGGCCGAGCAGCGCCGCCTCCGCAGCTCTCCCCGTTCTCGGTGCCTCAGTTGTTTCCTTTGTTGCTGCTTACTTCTTGAACTGA MEMKKIACAALFAAAAVSAAVAADESISPAAAPGPSSAASAALPVLGASVVSFVAAYFLN Homology
BLAST of IVF0002781 vs. ExPASy Swiss-Prot
Match: Q8S2W4 (Arabinogalactan protein 23 OS=Arabidopsis thaliana OX=3702 GN=AGP23 PE=1 SV=2) HSP 1 Score: 48.5 bits (114), Expect = 3.0e-05 Identity = 37/61 (60.66%), Postives = 46/61 (75.41%), Query Frame = 0
BLAST of IVF0002781 vs. ExPASy TrEMBL
Match: A0A1S3CDX5 (arabinogalactan peptide 23-like OS=Cucumis melo OX=3656 GN=LOC103499912 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 4.7e-17 Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0
BLAST of IVF0002781 vs. ExPASy TrEMBL
Match: A0A0A0K6L5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G428800 PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 5.7e-15 Identity = 58/64 (90.62%), Postives = 60/64 (93.75%), Query Frame = 0
BLAST of IVF0002781 vs. ExPASy TrEMBL
Match: A0A6J1KX42 (arabinogalactan peptide 23-like OS=Cucurbita maxima OX=3661 GN=LOC111497929 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 1.1e-10 Identity = 50/62 (80.65%), Postives = 54/62 (87.10%), Query Frame = 0
BLAST of IVF0002781 vs. ExPASy TrEMBL
Match: A0A6J1H8I1 (arabinogalactan peptide 23-like OS=Cucurbita moschata OX=3662 GN=LOC111461032 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 2.5e-10 Identity = 49/62 (79.03%), Postives = 54/62 (87.10%), Query Frame = 0
BLAST of IVF0002781 vs. ExPASy TrEMBL
Match: A0A6J1F3F5 (arabinogalactan peptide 23-like OS=Cucurbita moschata OX=3662 GN=LOC111439670 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 1.6e-09 Identity = 48/62 (77.42%), Postives = 52/62 (83.87%), Query Frame = 0
BLAST of IVF0002781 vs. NCBI nr
Match: XP_008461276.1 (PREDICTED: arabinogalactan peptide 23-like [Cucumis melo]) HSP 1 Score: 95.5 bits (236), Expect = 2.73e-24 Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0
BLAST of IVF0002781 vs. NCBI nr
Match: KGN45143.1 (hypothetical protein Csa_016530 [Cucumis sativus]) HSP 1 Score: 88.6 bits (218), Expect = 1.69e-21 Identity = 58/64 (90.62%), Postives = 60/64 (93.75%), Query Frame = 0
BLAST of IVF0002781 vs. NCBI nr
Match: XP_038899473.1 (arabinogalactan protein 23-like [Benincasa hispida]) HSP 1 Score: 78.2 bits (191), Expect = 2.17e-17 Identity = 54/64 (84.38%), Postives = 58/64 (90.62%), Query Frame = 0
BLAST of IVF0002781 vs. NCBI nr
Match: KAG7025661.1 (Arabinogalactan peptide 23, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 74.7 bits (182), Expect = 5.12e-16 Identity = 50/62 (80.65%), Postives = 54/62 (87.10%), Query Frame = 0
BLAST of IVF0002781 vs. NCBI nr
Match: XP_023004714.1 (arabinogalactan peptide 23-like [Cucurbita maxima]) HSP 1 Score: 74.7 bits (182), Expect = 5.12e-16 Identity = 50/62 (80.65%), Postives = 54/62 (87.10%), Query Frame = 0
BLAST of IVF0002781 vs. TAIR 10
Match: AT3G57690.1 (arabinogalactan protein 23 ) HSP 1 Score: 48.5 bits (114), Expect = 2.2e-06 Identity = 37/61 (60.66%), Postives = 46/61 (75.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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