IVF0002717 (gene) Melon (IVF77) v1

Overview
NameIVF0002717
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionDrebrin-like
Locationchr06: 20346594 .. 20346899 (-)
RNA-Seq ExpressionIVF0002717
SyntenyIVF0002717
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAGATTCTAATGAACATAGGCAAGATAATAAACGAGCACATCATAACGAGGGGTTTGTTCCTCCTTAACCCTTCCCACACGTACTTAATTAAGAAACTATGCTTAAAGGCATATCCGGCATTAGATAATCTTCCTCAAGTAGAGGTGAAGGATGGGGTTTGTTCCTCCTCAACCCTTCACCGCATTATAGCCATCCACAAAATAAGGCTAAGTCAAAACACCTCAAAACTAAACAAGATGGAAGAAGAAGAGATCGAGGAAGAAGGTCCACTAAAACGCAAGTGGCCAAGGCGAGGATGA

mRNA sequence

ATGGAGGAGATTCTAATGAACATAGGCAAGATAATAAACGAGCACATCATAACGAGGGGTTTGTTCCTCCTTAACCCTTCCCACACGTACTTAATTAAGAAACTATGCTTAAAGGCATATCCGGCATTAGATAATCTTCCTCAAGTAGAGGTGAAGGATGGGGTTTGTTCCTCCTCAACCCTTCACCGCATTATAGCCATCCACAAAATAAGGCTAAGTCAAAACACCTCAAAACTAAACAAGATGGAAGAAGAAGAGATCGAGGAAGAAGGTCCACTAAAACGCAAGTGGCCAAGGCGAGGATGA

Coding sequence (CDS)

ATGGAGGAGATTCTAATGAACATAGGCAAGATAATAAACGAGCACATCATAACGAGGGGTTTGTTCCTCCTTAACCCTTCCCACACGTACTTAATTAAGAAACTATGCTTAAAGGCATATCCGGCATTAGATAATCTTCCTCAAGTAGAGGTGAAGGATGGGGTTTGTTCCTCCTCAACCCTTCACCGCATTATAGCCATCCACAAAATAAGGCTAAGTCAAAACACCTCAAAACTAAACAAGATGGAAGAAGAAGAGATCGAGGAAGAAGGTCCACTAAAACGCAAGTGGCCAAGGCGAGGATGA

Protein sequence

MEEILMNIGKIINEHIITRGLFLLNPSHTYLIKKLCLKAYPALDNLPQVEVKDGVCSSSTLHRIIAIHKIRLSQNTSKLNKMEEEEIEEEGPLKRKWPRRG
Homology
BLAST of IVF0002717 vs. ExPASy TrEMBL
Match: A0A5A7SGZ8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68G00650 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.6e-30
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0

Query: 1  MEEILMNIGKIINEHIITRGLFLLNPSHTYLIKKLCLKAYPALDNLPQVEVKDGVCSSST 60
          MEEILMNIGKIINEHIITRGLFLLNPSHTYLIKKLCLKAYPALDNLPQVEVKDGVCSSST
Sbjct: 11 MEEILMNIGKIINEHIITRGLFLLNPSHTYLIKKLCLKAYPALDNLPQVEVKDGVCSSST 70

Query: 61 LHRIIAIHK 70
          LHRIIAIHK
Sbjct: 71 LHRIIAIHK 79

BLAST of IVF0002717 vs. ExPASy TrEMBL
Match: A0A5D3BF32 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00380 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.3e-11
Identity = 51/96 (53.12%), Postives = 61/96 (63.54%), Query Frame = 0

Query: 1   MEEILMNIGKIINEHIITRGLFLLNPSH--TYLIKKLCLKAYPALDNLPQVEVKDGVCSS 60
           MEEI +NI KII+EH IT  + L   +    YLI+KLCLKA PALD LPQVEVKD V S+
Sbjct: 72  MEEIPVNIDKIISEH-ITAWVKLPRRARPFPYLIEKLCLKACPALDKLPQVEVKDEVWSN 131

Query: 61  STLHRIIAIHKIRLSQNTSKLNKMEEEEIEEEGPLK 95
           S  H IIAIHK +      K  + +EEE  E   +K
Sbjct: 132 SIRHHIIAIHKNKTKLKRLKTKQDDEEEASESKKIK 166

BLAST of IVF0002717 vs. ExPASy TrEMBL
Match: A0A5A7UWQ4 (Drebrin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G00550 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 6.5e-11
Identity = 55/112 (49.11%), Postives = 73/112 (65.18%), Query Frame = 0

Query: 1   MEEILMNIGKIINEHIITRGLFLLNPSHT----YLIKKLCLKAYPALDNLPQVEVKDGVC 60
           MEEI +N+G+II++HII   + + +P  T     LIKKLCLKA  ALDNLPQ+ VKDG+ 
Sbjct: 21  MEEIHVNVGEIISKHII---VGVKHPRGTRPFPQLIKKLCLKACSALDNLPQIGVKDGIW 80

Query: 61  SSSTLHRIIAI--HKIRLSQNTSKL----------NKMEEEEIEEEGPLKRK 97
           SS+TL+RIIAI  +K +L    +K           +K EEE+ E+  PLKRK
Sbjct: 81  SSATLYRIIAINRNKAKLKYLKAKQDGKSEVKEVDDKDEEEKEEDNVPLKRK 129

BLAST of IVF0002717 vs. ExPASy TrEMBL
Match: A0A0A0LAN0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G263250 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.9e-10
Identity = 48/112 (42.86%), Postives = 71/112 (63.39%), Query Frame = 0

Query: 1   MEEILMNIGKIINEHIITRGLFLLNP----SHTYLIKKLCLKAYPALDNLPQVEVKDGVC 60
           M++IL+NIGKII+ HII     + +P      +YLI++LCL+A   L+ LPQVEVKDG+ 
Sbjct: 58  MKKILVNIGKIISNHIIA---LVKHPRGARPFSYLIEQLCLRACLMLEKLPQVEVKDGIW 117

Query: 61  SSSTLHRIIAIHK-------IRLSQNTSKLNKMEEEEIEEEG-----PLKRK 97
             STLHRIIAIHK       ++  +    + +++++++EEE      P KRK
Sbjct: 118 LPSTLHRIIAIHKNKAKIKCLKTKEGCKVVKEIDDDDVEEEDKKDNIPQKRK 166

BLAST of IVF0002717 vs. ExPASy TrEMBL
Match: A0A5D3BTN1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G00190 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 6.0e-09
Identity = 38/70 (54.29%), Postives = 51/70 (72.86%), Query Frame = 0

Query: 1  MEEILMNIGKIINEHIITRGLFLLNPSH-TYLIKKLCLKAYPALDNLPQVEVKDGVCSSS 60
          ME +L+NIGKII++HII          H  +LI++LCLKA  +L+ LP VEVKDGV +++
Sbjct: 22 MEHLLVNIGKIISKHIIAWVKHPHEARHFMHLIERLCLKACLSLEQLPYVEVKDGVWNTT 81

Query: 61 TLHRIIAIHK 70
          TLHRII +HK
Sbjct: 82 TLHRIIFVHK 91

BLAST of IVF0002717 vs. NCBI nr
Match: KAA0025420.1 (hypothetical protein E6C27_scaffold417G00040 [Cucumis melo var. makuwa] >TYK04763.1 hypothetical protein E5676_scaffold68G00650 [Cucumis melo var. makuwa])

HSP 1 Score: 141 bits (355), Expect = 5.26e-41
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0

Query: 1  MEEILMNIGKIINEHIITRGLFLLNPSHTYLIKKLCLKAYPALDNLPQVEVKDGVCSSST 60
          MEEILMNIGKIINEHIITRGLFLLNPSHTYLIKKLCLKAYPALDNLPQVEVKDGVCSSST
Sbjct: 11 MEEILMNIGKIINEHIITRGLFLLNPSHTYLIKKLCLKAYPALDNLPQVEVKDGVCSSST 70

Query: 61 LHRIIAIHK 69
          LHRIIAIHK
Sbjct: 71 LHRIIAIHK 79

BLAST of IVF0002717 vs. NCBI nr
Match: KAA0060282.1 (drebrin-like [Cucumis melo var. makuwa])

HSP 1 Score: 77.4 bits (189), Expect = 1.50e-15
Identity = 55/112 (49.11%), Postives = 72/112 (64.29%), Query Frame = 0

Query: 1   MEEILMNIGKIINEHIITRGLFLLNPSHT----YLIKKLCLKAYPALDNLPQVEVKDGVC 60
           MEEI +N+G+II++HII     + +P  T     LIKKLCLKA  ALDNLPQ+ VKDG+ 
Sbjct: 21  MEEIHVNVGEIISKHIIVG---VKHPRGTRPFPQLIKKLCLKACSALDNLPQIGVKDGIW 80

Query: 61  SSSTLHRIIAIH--KIRLSQNTSKLN----------KMEEEEIEEEGPLKRK 96
           SS+TL+RIIAI+  K +L    +K +          K EEE+ E+  PLKRK
Sbjct: 81  SSATLYRIIAINRNKAKLKYLKAKQDGKSEVKEVDDKDEEEKEEDNVPLKRK 129

BLAST of IVF0002717 vs. NCBI nr
Match: TYJ97737.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 79.0 bits (193), Expect = 3.74e-15
Identity = 51/96 (53.12%), Postives = 61/96 (63.54%), Query Frame = 0

Query: 1   MEEILMNIGKIINEHIITRGLFLLNPSHT--YLIKKLCLKAYPALDNLPQVEVKDGVCSS 60
           MEEI +NI KII+EHI T  + L   +    YLI+KLCLKA PALD LPQVEVKD V S+
Sbjct: 72  MEEIPVNIDKIISEHI-TAWVKLPRRARPFPYLIEKLCLKACPALDKLPQVEVKDEVWSN 131

Query: 61  STLHRIIAIHKIRLSQNTSKLNKMEEEEIEEEGPLK 94
           S  H IIAIHK +      K  + +EEE  E   +K
Sbjct: 132 SIRHHIIAIHKNKTKLKRLKTKQDDEEEASESKKIK 166

BLAST of IVF0002717 vs. NCBI nr
Match: KGN57727.1 (hypothetical protein Csa_009739 [Cucumis sativus])

HSP 1 Score: 75.9 bits (185), Expect = 1.76e-14
Identity = 49/113 (43.36%), Postives = 70/113 (61.95%), Query Frame = 0

Query: 1   MEEILMNIGKIINEHIIT-----RGLFLLNPSHTYLIKKLCLKAYPALDNLPQVEVKDGV 60
           M++IL+NIGKII+ HII      RG        +YLI++LCL+A   L+ LPQVEVKDG+
Sbjct: 58  MKKILVNIGKIISNHIIALVKHPRGA----RPFSYLIEQLCLRACLMLEKLPQVEVKDGI 117

Query: 61  CSSSTLHRIIAIHK-------IRLSQNTSKLNKMEEEEIEEEG-----PLKRK 96
              STLHRIIAIHK       ++  +    + +++++++EEE      P KRK
Sbjct: 118 WLPSTLHRIIAIHKNKAKIKCLKTKEGCKVVKEIDDDDVEEEDKKDNIPQKRK 166

BLAST of IVF0002717 vs. NCBI nr
Match: TYK00908.1 (hypothetical protein E5676_scaffold602G00710 [Cucumis melo var. makuwa])

HSP 1 Score: 70.9 bits (172), Expect = 2.35e-13
Identity = 40/73 (54.79%), Postives = 53/73 (72.60%), Query Frame = 0

Query: 1  MEEILMNIGKIINEHIITRGLFLLNP----SHTYLIKKLCLKAYPALDNLPQVEVKDGVC 60
          MEE+ +N+G+II EHI+     + +P    S  +LI+KLCLK   AL+ LPQVEVKDG+C
Sbjct: 21 MEELQVNLGEIICEHILE---CVKHPYGARSFPHLIEKLCLKTCLALEKLPQVEVKDGMC 80

Query: 61 SSSTLHRIIAIHK 69
          ++ TL RIIAIHK
Sbjct: 81 TTITLPRIIAIHK 90

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7SGZ83.6e-30100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BF321.3e-1153.13Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G0... [more]
A0A5A7UWQ46.5e-1149.11Drebrin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G00550 PE... [more]
A0A0A0LAN01.9e-1042.86Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G263250 PE=4 SV=1[more]
A0A5D3BTN16.0e-0954.29Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0025420.15.26e-41100.00hypothetical protein E6C27_scaffold417G00040 [Cucumis melo var. makuwa] >TYK0476... [more]
KAA0060282.11.50e-1549.11drebrin-like [Cucumis melo var. makuwa][more]
TYJ97737.13.74e-1553.13protein MNN4-like [Cucumis melo var. makuwa][more]
KGN57727.11.76e-1443.36hypothetical protein Csa_009739 [Cucumis sativus][more]
TYK00908.12.35e-1354.79hypothetical protein E5676_scaffold602G00710 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..101

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0002717.2IVF0002717.2mRNA