IVF0002656 (gene) Melon (IVF77) v1

Overview
NameIVF0002656
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionAminoacyl-tRNA hydrolase
Locationchr04: 1227154 .. 1230093 (+)
RNA-Seq ExpressionIVF0002656
SyntenyIVF0002656
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CCACAAGATAAGATATTGGTATTGAAACGCAACAACCGCGCTTTACCCATAACTCTAATTCTTCCGCTCTCTTTGTTTTTCTAAGAAGGCTCATGTTGGGTGCTTCTAAGTCTTCCAGAAAGGTATTCAATTCCATGGGTTGCATTCATTCTTGCTTCTTTACACCCTCTTGATGATGTTTGAATTAATTTTTCTCGTTTTCTCTTTTCTGTATTGTTAGAAGCAGCAAGTGAAGCCAGAAAAAGAATGGCTGTCGGTGAGTTTCAAACCCGAGAACTTCATTCCAGGCCTCGTAATTGGTTTCATTCTTGGGTTGTTTTTGGATTTATCAAAACCCAGTAAAGGTAATGCTAAGAAGGGCTATTTCCTGCCGTCCAAGTACCAACAGCTTTCTCCAGCCTCAAATAACGGTGATCAAGAGCTCAAATTGGTTAGTGTTCGACTTTACTAGAATTTCTGGATTTCTTTTGAGTTGGAGATGGTTTCTCTACATGTTTGAAATAGATTATGATCACTAAATTAGAATGAAATGAAAGAACGAAATAAGAAGTTTTTAGTTTAGCCTCAACTGTCTACAATAAAAGGGTACGCGAGGTTTCGTGTTTAATGTCATTGGATATGGTTTTCCATGGCTCAATTTTGAGGCGTGAATTTCTTGTAAGATAGAATAGTTTAGGGCCTATTTGAGGTAGTTGTATAATTATATTGCGAACAAAATTAGCTTTCGTGCCGATTTGCCTAATCGTTAAGCAGAGTTTTAGGTTCTGTGCTTACCCCGTCTTTGCTGTTGCCATCAAGTATCACTGTAGTCTGTCAGGACAGAACCTAAAAGGGGAATCAATTAGTCTGAGGATCAAAAGGGCCGGGTGAAATATGATTTAGCAGTTAGACAAGTTATCTTTACTGTTATGACATCAAGATAAGAAAAAAAACGTAGTAGAGAATCAACACAAAGATTCATTACAGTGTGACAAAGAGAGAGCCGAAATCCCTAGGGCCAAAATCCTAAATAACTTATATAGGACAAATACGGAAGTAACTTAGATTTAGGGGGCATTCCCAGTGAGCCCTCTTACTTGGTGATTTGAAGTGCCAAATAATAAATTTAAGACGATCCAACATTTCCTTTGCAAACTTGGTTATGTGTAGCATATTTGTGTAGTTCCAAAAATTTTGAAATGTTGTAGTATGGCTTATGTAGATTTCCTTCCCTAAGCATAGAAAGGGAACTACACTGACAAATTGGCAATCACACCAAGTCCTTGTGTCATGTAACTTGTACAATGCGTCTTGCTGTGAAGAATCATCTGACATTCTTACTTTTCAATTGAAGGTCCTTGTCGTTAGGCAAGATCTGAAGATGGGTTCTGGAAAAATTGCATCTCAATGTGCTCGTAAGATTTAAGATGCTGAATTCCATACTTGTTTCATGCGCATTTTATTTTTGTTTCTAATTACATTGGTTGGTTTCTCACTTCACATCTTCCTGCCATTGAAGCTAAATATTTTTGCATGTTTTTCTGTCAAATTGTGAAGATGCCGCTACTGGCTTGTATGCAGAACTAATGCAAAGGTATTCCTTGTACCATACTATTTATGAATATCTGCTTTGATCAAACCATATACACGGCTAATTCTTCATCCTTTTCTCTTTTCTGGATCTATGCCCATTTCTAATATCTAGTGCAGCCACCGAAACCTTTTGAGACAGTGGGAACTATGTGGGCAGCCGAAAATAGTTGTAACATGCAAGAATCAACACGAAATGTAAGCAGGTGATTCCTTTCTCCAAAAATGTAATCGGTAATAAACATGTGAAACCAAAACCTTACGGTTTTTGGAAAGACTTTGTAGGTTTGTGGGTTGAGGACTGGGAGGAGGAATGAGAGCACAGGGGAAGTGTTGTTTAATAAAATTACACTTTTTTTTTTGTTAAATCTACTTCTTTTCTTAAATCAGGAATAAACTGAAGGATGCAGCTGAGAATATTGGCCTTCCTACTTTTGTTGTTGCTGATGCTGGACGCACACAGGTACAAACTTTGTTCTCCACTTGTCTGCTCGGATGAATTTACAAGCATTTTGATTAATGCATGAGTAATGGTGTGGTAACTGGGTGCAATAATGCTTGACATGTTTTATTAATGTCTATATTTTGGCATAGTCAAACAATTCTACACATGATATGCTGTCATACGTTGGCATTACATTGTTTTATTCGTTAGCCATCAGAAAGTTAATGTTATGGGATCTCCTAAGCGAAAAAAATAGCTGTTAGTGGTTCAGCATTGTATAGGGTGGCTGCAAAACCCTCGGTTTTGTAGTTGATGGAAAGGTTCACTTGGCTCTTTGAAGAAGCGATTTTTTCCAAGCCCAAATTTGTATGCAATAATCATTTTGATGAACTTCAAAGTGCCTATAATTGGACACCTCAAGAAACATGTTTGTAAACATTTCACTAAGTACATTTAGTTCTCCGGAACTTGTCAACTGGCATTCTGAAATCAGTTCAATGATGTGCAGGTTTCGGCTGGATCGAAGACTGTTCTTGCCATTGGACCTGGTAATGCTTCTTTACCCTATGATAGAATTCCGCGGTTGCCTGGTTGATTTTCTTCGGTTGTCTTTCTTTTGTTAATTTAATTGTACAACACTTAATCCACTTGGTTTGCTTTGAGTTATGGTAAATTTAACAATAAATTCATGTTCTTAACATTTCTCAATAGCTCAAGACCCACTAAATGAATGATCAATATTTATCGGAGAGAACAACATTATAGGAGTACAAAACGCACAACGTCTTGCTCTGATATTACGTTAACGTACCACTCAAATTTAACTATTAATTCATATTCTTAACAATATACATGTTCTCTGTCTAATTTAAATAGGGCCAAAGGAAGCCATTGATGCAGTAACTGGGAAACTCCGCCTACTCTAG

mRNA sequence

CCACAAGATAAGATATTGGTATTGAAACGCAACAACCGCGCTTTACCCATAACTCTAATTCTTCCGCTCTCTTTGTTTTTCTAAGAAGGCTCATGTTGGGTGCTTCTAAGTCTTCCAGAAAGCAAGTGAAGCCAGAAAAAGAATGGCTGTCGGTGAGTTTCAAACCCGAGAACTTCATTCCAGGCCTCGTAATTGGTTTCATTCTTGGGTTGTTTTTGGATTTATCAAAACCCAGTAAAGGTAATGCTAAGAAGGGCTATTTCCTGCCGTCCAAGTACCAACAGCTTTCTCCAGCCTCAAATAACGGTGATCAAGAGCTCAAATTGGTCCTTGTCGTTAGGCAAGATCTGAAGATGGGTTCTGGAAAAATTGCATCTCAATGTGCTCATGCCGCTACTGGCTTGTATGCAGAACTAATGCAAAGCCACCGAAACCTTTTGAGACAGTGGGAACTATGTGGGCAGCCGAAAATAGTTGTAACATGCAAGAATCAACACGAAATGAATAAACTGAAGGATGCAGCTGAGAATATTGGCCTTCCTACTTTTGTTGTTGCTGATGCTGGACGCACACAGGTTTCGGCTGGATCGAAGACTGTTCTTGCCATTGGACCTGGGCCAAAGGAAGCCATTGATGCAGTAACTGGGAAACTCCGCCTACTCTAG

Coding sequence (CDS)

ATGTTGGGTGCTTCTAAGTCTTCCAGAAAGCAAGTGAAGCCAGAAAAAGAATGGCTGTCGGTGAGTTTCAAACCCGAGAACTTCATTCCAGGCCTCGTAATTGGTTTCATTCTTGGGTTGTTTTTGGATTTATCAAAACCCAGTAAAGGTAATGCTAAGAAGGGCTATTTCCTGCCGTCCAAGTACCAACAGCTTTCTCCAGCCTCAAATAACGGTGATCAAGAGCTCAAATTGGTCCTTGTCGTTAGGCAAGATCTGAAGATGGGTTCTGGAAAAATTGCATCTCAATGTGCTCATGCCGCTACTGGCTTGTATGCAGAACTAATGCAAAGCCACCGAAACCTTTTGAGACAGTGGGAACTATGTGGGCAGCCGAAAATAGTTGTAACATGCAAGAATCAACACGAAATGAATAAACTGAAGGATGCAGCTGAGAATATTGGCCTTCCTACTTTTGTTGTTGCTGATGCTGGACGCACACAGGTTTCGGCTGGATCGAAGACTGTTCTTGCCATTGGACCTGGGCCAAAGGAAGCCATTGATGCAGTAACTGGGAAACTCCGCCTACTCTAG

Protein sequence

MLGASKSSRKQVKPEKEWLSVSFKPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFLPSKYQQLSPASNNGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQWELCGQPKIVVTCKNQHEMNKLKDAAENIGLPTFVVADAGRTQVSAGSKTVLAIGPGPKEAIDAVTGKLRLL
Homology
BLAST of IVF0002656 vs. ExPASy Swiss-Prot
Match: Q9Y3E5 (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Homo sapiens OX=9606 GN=PTRH2 PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 8.6e-30
Identity = 71/161 (44.10%), Postives = 99/161 (61.49%), Query Frame = 0

Query: 31  GLVIGFILGLFLDLS-KPSKGNAKKGYFLPSKYQQLSPASNNGDQ-ELKLVLVVRQDLKM 90
           GL +G   G+ L  S +   G   K     +     S AS  GD  E K++LVVR DLKM
Sbjct: 18  GLAVGVACGMCLGWSLRVCFGMLPKSKTSKTHTDTESEASILGDSGEYKMILVVRNDLKM 77

Query: 91  GSGKIASQCAHAATGLYAELMQSHRNLLRQWELCGQPKIVVTCKNQHEMNKLKDAAENIG 150
           G GK+A+QC+HAA   Y ++ + +  +L+QWE CGQPK+VV   ++  +  L   A+ +G
Sbjct: 78  GKGKVAAQCSHAAVSAYKQIQRRNPEMLKQWEYCGQPKVVVKAPDEETLIALLAHAKMLG 137

Query: 151 LPTFVVADAGRTQVSAGSKTVLAIGPGPKEAIDAVTGKLRL 190
           L   ++ DAGRTQ++ GS+TVL IGPGP + ID VTG L+L
Sbjct: 138 LTVSLIQDAGRTQIAPGSQTVLGIGPGPADLIDKVTGHLKL 178

BLAST of IVF0002656 vs. ExPASy Swiss-Prot
Match: Q3ZBL5 (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Bos taurus OX=9913 GN=PTRH2 PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 9.5e-29
Identity = 58/115 (50.43%), Postives = 83/115 (72.17%), Query Frame = 0

Query: 75  ELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQWELCGQPKIVVTCKNQ 134
           E K++LVVR DLKMG GK+A+QC+HAA   Y ++ + +  LL++WE CGQPK+VV   ++
Sbjct: 64  EYKMILVVRNDLKMGKGKVAAQCSHAAVSAYKQIQRRNPELLKEWEYCGQPKVVVKAPDE 123

Query: 135 HEMNKLKDAAENIGLPTFVVADAGRTQVSAGSKTVLAIGPGPKEAIDAVTGKLRL 190
             + +L   A+ +GL   ++ DAGRTQ++ GS+TVL IGPGP + ID VTG L+L
Sbjct: 124 ETLVELLTHAKVLGLTVSLIQDAGRTQIAPGSRTVLGIGPGPADLIDKVTGHLKL 178

BLAST of IVF0002656 vs. ExPASy Swiss-Prot
Match: Q8R2Y8 (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Mus musculus OX=10090 GN=Ptrh2 PE=1 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 4.7e-28
Identity = 58/115 (50.43%), Postives = 80/115 (69.57%), Query Frame = 0

Query: 75  ELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQWELCGQPKIVVTCKNQ 134
           E K++LVVR DLKMG GK+A+QC+HAA   Y +  +    +L++WE CGQPK+VV   ++
Sbjct: 66  EYKMILVVRTDLKMGKGKVAAQCSHAAVSAYKQTQRRSPQVLKEWEYCGQPKVVVKAPDE 125

Query: 135 HEMNKLKDAAENIGLPTFVVADAGRTQVSAGSKTVLAIGPGPKEAIDAVTGKLRL 190
             + +L   A+ +GL   ++ DAGRTQ+  GS+TVL IGPGP E ID VTG L+L
Sbjct: 126 DTLIQLLTHAKTLGLTVSLIQDAGRTQIEPGSRTVLGIGPGPVELIDEVTGHLKL 180

BLAST of IVF0002656 vs. ExPASy Swiss-Prot
Match: O97067 (Probable peptidyl-tRNA hydrolase 2 OS=Drosophila melanogaster OX=7227 GN=CG1307 PE=2 SV=2)

HSP 1 Score: 115.9 bits (289), Expect = 4.9e-25
Identity = 60/118 (50.85%), Postives = 74/118 (62.71%), Query Frame = 0

Query: 73  DQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQWELCGQPKIVVTCK 132
           +   K+VLVVR DLKMG GKIA+QC H A G Y   +     LLR WE CG  KI V  +
Sbjct: 69  NDNFKMVLVVRNDLKMGKGKIAAQCGHGAVGAYQRAVVRTPRLLRSWENCGCAKIAVRVE 128

Query: 133 NQHEMNKLKDAAENIGLPTFVVADAGRTQVSAGSKTVLAIGPGPKEAIDAVTGKLRLL 191
           ++ E+  +K  AE   L T ++ DAGRTQ+ A SKTVLA+GP     ID VTG L+LL
Sbjct: 129 SEAELMAIKKEAERQQLNTCLIRDAGRTQIEANSKTVLAVGPAAAADIDRVTGHLKLL 186

BLAST of IVF0002656 vs. ExPASy Swiss-Prot
Match: O13830 (Probable peptidyl-tRNA hydrolase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC19A8.14 PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 8.3e-25
Identity = 70/195 (35.90%), Postives = 101/195 (51.79%), Query Frame = 0

Query: 21  VSFKPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFLPSKYQQLSPASNNGDQ------ 80
           +S  P   + G V+GF++G    ++  S+G + K     S  ++ SP S + D+      
Sbjct: 10  ISSFPAAVLVGAVVGFMIGRKYSVADASRGYSSKNANKASNPEKESPVSVSNDEDSESET 69

Query: 81  --------------------ELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRN 140
                               + K+VLVVR DL M  GKIA+QCAHAA   Y        +
Sbjct: 70  ELLDMLKGNSSLAALALAEGQTKMVLVVRTDLGMTKGKIAAQCAHAALACYKIASAVDPD 129

Query: 141 LLRQWELCGQPKIVVTCKNQHEMNKLKDAAENIGLPTFVVADAGRTQVSAGSKTVLAIGP 190
           L+R WE  GQ KI +  + +  +  L+  A ++GL   V+ DAGRTQ+++GS TVL IGP
Sbjct: 130 LVRIWENAGQAKITLQAQTEETLELLQAQAMSLGLCARVIHDAGRTQIASGSATVLGIGP 189

BLAST of IVF0002656 vs. ExPASy TrEMBL
Match: A0A1S3CRS9 (Aminoacyl-tRNA hydrolase OS=Cucumis melo OX=3656 GN=LOC103503602 PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 4.8e-100
Identity = 190/192 (98.96%), Postives = 190/192 (98.96%), Query Frame = 0

Query: 1   MLGASKSSRK--QVKPEKEWLSVSFKPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFL 60
           MLGASKSSRK  QVKPEKEWLSVSFKPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFL
Sbjct: 1   MLGASKSSRKKQQVKPEKEWLSVSFKPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFL 60

Query: 61  PSKYQQLSPASNNGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ 120
           PSKYQQLSPASNNGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ
Sbjct: 61  PSKYQQLSPASNNGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ 120

Query: 121 WELCGQPKIVVTCKNQHEMNKLKDAAENIGLPTFVVADAGRTQVSAGSKTVLAIGPGPKE 180
           WELCGQPKIVVTCKNQHEMNKLKDAAENIGLPTFVVADAGRTQVSAGSKTVLAIGPGPKE
Sbjct: 121 WELCGQPKIVVTCKNQHEMNKLKDAAENIGLPTFVVADAGRTQVSAGSKTVLAIGPGPKE 180

Query: 181 AIDAVTGKLRLL 191
           AIDAVTGKLRLL
Sbjct: 181 AIDAVTGKLRLL 192

BLAST of IVF0002656 vs. ExPASy TrEMBL
Match: A0A0A0LJW4 (Aminoacyl-tRNA hydrolase OS=Cucumis sativus OX=3659 GN=Csa_3G895670 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 3.1e-99
Identity = 188/192 (97.92%), Postives = 190/192 (98.96%), Query Frame = 0

Query: 1   MLGASKSSRK--QVKPEKEWLSVSFKPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFL 60
           MLGASKSSRK  QVKPEKEWLSVSFKPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFL
Sbjct: 1   MLGASKSSRKKQQVKPEKEWLSVSFKPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFL 60

Query: 61  PSKYQQLSPASNNGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ 120
           PSKYQQLSPASNNGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ
Sbjct: 61  PSKYQQLSPASNNGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ 120

Query: 121 WELCGQPKIVVTCKNQHEMNKLKDAAENIGLPTFVVADAGRTQVSAGSKTVLAIGPGPKE 180
           WELCGQPKIVVTCKNQHEMNKLKD+AENIGLPTFVVADAGRTQVSAGSKTVLAIGPGPKE
Sbjct: 121 WELCGQPKIVVTCKNQHEMNKLKDSAENIGLPTFVVADAGRTQVSAGSKTVLAIGPGPKE 180

Query: 181 AIDAVTGKLRLL 191
           AIDAV+GKLRLL
Sbjct: 181 AIDAVSGKLRLL 192

BLAST of IVF0002656 vs. ExPASy TrEMBL
Match: A0A1S3CQP0 (Aminoacyl-tRNA hydrolase OS=Cucumis melo OX=3656 GN=LOC103503602 PE=4 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 3.2e-96
Identity = 189/205 (92.20%), Postives = 189/205 (92.20%), Query Frame = 0

Query: 1   MLGASKSSRK--QVKPEKEWLSVSFKPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFL 60
           MLGASKSSRK  QVKPEKEWLSVSFKPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFL
Sbjct: 1   MLGASKSSRKKQQVKPEKEWLSVSFKPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFL 60

Query: 61  PSKYQQLSPASNNGDQELKLVLVVRQDLKMGSGKIASQCA-------------HAATGLY 120
           PSKYQQLSPASNNGDQELKLVLVVRQDLKMGSGKIASQCA              AATGLY
Sbjct: 61  PSKYQQLSPASNNGDQELKLVLVVRQDLKMGSGKIASQCAPKYFCMFFCQICEDAATGLY 120

Query: 121 AELMQSHRNLLRQWELCGQPKIVVTCKNQHEMNKLKDAAENIGLPTFVVADAGRTQVSAG 180
           AELMQSHRNLLRQWELCGQPKIVVTCKNQHEMNKLKDAAENIGLPTFVVADAGRTQVSAG
Sbjct: 121 AELMQSHRNLLRQWELCGQPKIVVTCKNQHEMNKLKDAAENIGLPTFVVADAGRTQVSAG 180

Query: 181 SKTVLAIGPGPKEAIDAVTGKLRLL 191
           SKTVLAIGPGPKEAIDAVTGKLRLL
Sbjct: 181 SKTVLAIGPGPKEAIDAVTGKLRLL 205

BLAST of IVF0002656 vs. ExPASy TrEMBL
Match: A0A6J1ISX6 (Aminoacyl-tRNA hydrolase OS=Cucurbita maxima OX=3661 GN=LOC111480317 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.0e-94
Identity = 179/192 (93.23%), Postives = 184/192 (95.83%), Query Frame = 0

Query: 1   MLGASKSSRK--QVKPEKEWLSVSFKPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFL 60
           MLG+S SSRK  QVKPEKEWLSVSF+PENFIPGLVIGFI G  LDLSKPSKGNAKKGYFL
Sbjct: 1   MLGSSNSSRKKQQVKPEKEWLSVSFRPENFIPGLVIGFIAGFLLDLSKPSKGNAKKGYFL 60

Query: 61  PSKYQQLSPASNNGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ 120
           PSKYQQ+SPASNNGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYA+LMQSHRNLLRQ
Sbjct: 61  PSKYQQISPASNNGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAQLMQSHRNLLRQ 120

Query: 121 WELCGQPKIVVTCKNQHEMNKLKDAAENIGLPTFVVADAGRTQVSAGSKTVLAIGPGPKE 180
           WELCGQPKIVVTCKNQ EMNKLKDAAEN+GLPTFVVADAGRTQVSAGSKTVLAIGPGPKE
Sbjct: 121 WELCGQPKIVVTCKNQQEMNKLKDAAENVGLPTFVVADAGRTQVSAGSKTVLAIGPGPKE 180

Query: 181 AIDAVTGKLRLL 191
            IDAVTGKLRLL
Sbjct: 181 FIDAVTGKLRLL 192

BLAST of IVF0002656 vs. ExPASy TrEMBL
Match: A0A6J1FS99 (Aminoacyl-tRNA hydrolase OS=Cucurbita moschata OX=3662 GN=LOC111446781 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.0e-94
Identity = 179/192 (93.23%), Postives = 184/192 (95.83%), Query Frame = 0

Query: 1   MLGASKSSRK--QVKPEKEWLSVSFKPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFL 60
           MLG+S SSRK  QVKPEKEWLSVSF+PENFIPGLVIGFI G  LDLSKPSKGNAKKGYFL
Sbjct: 1   MLGSSNSSRKKQQVKPEKEWLSVSFRPENFIPGLVIGFIAGFLLDLSKPSKGNAKKGYFL 60

Query: 61  PSKYQQLSPASNNGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ 120
           PSKYQQ+SPASNNGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYA+LMQSHRNLLRQ
Sbjct: 61  PSKYQQISPASNNGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAQLMQSHRNLLRQ 120

Query: 121 WELCGQPKIVVTCKNQHEMNKLKDAAENIGLPTFVVADAGRTQVSAGSKTVLAIGPGPKE 180
           WELCGQPKIVVTCKNQ EMNKLKDAAEN+GLPTFVVADAGRTQVSAGSKTVLAIGPGPKE
Sbjct: 121 WELCGQPKIVVTCKNQQEMNKLKDAAENVGLPTFVVADAGRTQVSAGSKTVLAIGPGPKE 180

Query: 181 AIDAVTGKLRLL 191
            IDAVTGKLRLL
Sbjct: 181 FIDAVTGKLRLL 192

BLAST of IVF0002656 vs. NCBI nr
Match: XP_011652615.1 (peptidyl-tRNA hydrolase 2, mitochondrial isoform X2 [Cucumis sativus])

HSP 1 Score: 376 bits (965), Expect = 2.43e-131
Identity = 188/190 (98.95%), Postives = 190/190 (100.00%), Query Frame = 0

Query: 1   MLGASKSSRKQVKPEKEWLSVSFKPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFLPS 60
           MLGASKSSRKQVKPEKEWLSVSFKPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFLPS
Sbjct: 1   MLGASKSSRKQVKPEKEWLSVSFKPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFLPS 60

Query: 61  KYQQLSPASNNGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQWE 120
           KYQQLSPASNNGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQWE
Sbjct: 61  KYQQLSPASNNGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQWE 120

Query: 121 LCGQPKIVVTCKNQHEMNKLKDAAENIGLPTFVVADAGRTQVSAGSKTVLAIGPGPKEAI 180
           LCGQPKIVVTCKNQHEMNKLKD+AENIGLPTFVVADAGRTQVSAGSKTVLAIGPGPKEAI
Sbjct: 121 LCGQPKIVVTCKNQHEMNKLKDSAENIGLPTFVVADAGRTQVSAGSKTVLAIGPGPKEAI 180

Query: 181 DAVTGKLRLL 190
           DAV+GKLRLL
Sbjct: 181 DAVSGKLRLL 190

BLAST of IVF0002656 vs. NCBI nr
Match: XP_008466065.1 (PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 374 bits (959), Expect = 2.15e-130
Identity = 190/192 (98.96%), Postives = 190/192 (98.96%), Query Frame = 0

Query: 1   MLGASKSSRK--QVKPEKEWLSVSFKPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFL 60
           MLGASKSSRK  QVKPEKEWLSVSFKPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFL
Sbjct: 1   MLGASKSSRKKQQVKPEKEWLSVSFKPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFL 60

Query: 61  PSKYQQLSPASNNGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ 120
           PSKYQQLSPASNNGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ
Sbjct: 61  PSKYQQLSPASNNGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ 120

Query: 121 WELCGQPKIVVTCKNQHEMNKLKDAAENIGLPTFVVADAGRTQVSAGSKTVLAIGPGPKE 180
           WELCGQPKIVVTCKNQHEMNKLKDAAENIGLPTFVVADAGRTQVSAGSKTVLAIGPGPKE
Sbjct: 121 WELCGQPKIVVTCKNQHEMNKLKDAAENIGLPTFVVADAGRTQVSAGSKTVLAIGPGPKE 180

Query: 181 AIDAVTGKLRLL 190
           AIDAVTGKLRLL
Sbjct: 181 AIDAVTGKLRLL 192

BLAST of IVF0002656 vs. NCBI nr
Match: XP_004136220.1 (peptidyl-tRNA hydrolase 2, mitochondrial isoform X1 [Cucumis sativus] >KGN60321.1 hypothetical protein Csa_002634 [Cucumis sativus])

HSP 1 Score: 371 bits (952), Expect = 2.51e-129
Identity = 188/192 (97.92%), Postives = 190/192 (98.96%), Query Frame = 0

Query: 1   MLGASKSSRK--QVKPEKEWLSVSFKPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFL 60
           MLGASKSSRK  QVKPEKEWLSVSFKPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFL
Sbjct: 1   MLGASKSSRKKQQVKPEKEWLSVSFKPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFL 60

Query: 61  PSKYQQLSPASNNGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ 120
           PSKYQQLSPASNNGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ
Sbjct: 61  PSKYQQLSPASNNGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ 120

Query: 121 WELCGQPKIVVTCKNQHEMNKLKDAAENIGLPTFVVADAGRTQVSAGSKTVLAIGPGPKE 180
           WELCGQPKIVVTCKNQHEMNKLKD+AENIGLPTFVVADAGRTQVSAGSKTVLAIGPGPKE
Sbjct: 121 WELCGQPKIVVTCKNQHEMNKLKDSAENIGLPTFVVADAGRTQVSAGSKTVLAIGPGPKE 180

Query: 181 AIDAVTGKLRLL 190
           AIDAV+GKLRLL
Sbjct: 181 AIDAVSGKLRLL 192

BLAST of IVF0002656 vs. NCBI nr
Match: XP_008466063.1 (PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 361 bits (926), Expect = 3.66e-125
Identity = 189/205 (92.20%), Postives = 189/205 (92.20%), Query Frame = 0

Query: 1   MLGASKSSRK--QVKPEKEWLSVSFKPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFL 60
           MLGASKSSRK  QVKPEKEWLSVSFKPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFL
Sbjct: 1   MLGASKSSRKKQQVKPEKEWLSVSFKPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFL 60

Query: 61  PSKYQQLSPASNNGDQELKLVLVVRQDLKMGSGKIASQCA-------------HAATGLY 120
           PSKYQQLSPASNNGDQELKLVLVVRQDLKMGSGKIASQCA              AATGLY
Sbjct: 61  PSKYQQLSPASNNGDQELKLVLVVRQDLKMGSGKIASQCAPKYFCMFFCQICEDAATGLY 120

Query: 121 AELMQSHRNLLRQWELCGQPKIVVTCKNQHEMNKLKDAAENIGLPTFVVADAGRTQVSAG 180
           AELMQSHRNLLRQWELCGQPKIVVTCKNQHEMNKLKDAAENIGLPTFVVADAGRTQVSAG
Sbjct: 121 AELMQSHRNLLRQWELCGQPKIVVTCKNQHEMNKLKDAAENIGLPTFVVADAGRTQVSAG 180

Query: 181 SKTVLAIGPGPKEAIDAVTGKLRLL 190
           SKTVLAIGPGPKEAIDAVTGKLRLL
Sbjct: 181 SKTVLAIGPGPKEAIDAVTGKLRLL 205

BLAST of IVF0002656 vs. NCBI nr
Match: XP_022941498.1 (peptidyl-tRNA hydrolase 2, mitochondrial [Cucurbita moschata] >XP_022981057.1 peptidyl-tRNA hydrolase 2, mitochondrial [Cucurbita maxima] >XP_023523204.1 peptidyl-tRNA hydrolase 2, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo] >KAG6608093.1 Peptidyl-tRNA hydrolase 2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 356 bits (913), Expect = 2.22e-123
Identity = 179/192 (93.23%), Postives = 184/192 (95.83%), Query Frame = 0

Query: 1   MLGASKSSRK--QVKPEKEWLSVSFKPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFL 60
           MLG+S SSRK  QVKPEKEWLSVSF+PENFIPGLVIGFI G  LDLSKPSKGNAKKGYFL
Sbjct: 1   MLGSSNSSRKKQQVKPEKEWLSVSFRPENFIPGLVIGFIAGFLLDLSKPSKGNAKKGYFL 60

Query: 61  PSKYQQLSPASNNGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQ 120
           PSKYQQ+SPASNNGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYA+LMQSHRNLLRQ
Sbjct: 61  PSKYQQISPASNNGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAQLMQSHRNLLRQ 120

Query: 121 WELCGQPKIVVTCKNQHEMNKLKDAAENIGLPTFVVADAGRTQVSAGSKTVLAIGPGPKE 180
           WELCGQPKIVVTCKNQ EMNKLKDAAEN+GLPTFVVADAGRTQVSAGSKTVLAIGPGPKE
Sbjct: 121 WELCGQPKIVVTCKNQQEMNKLKDAAENVGLPTFVVADAGRTQVSAGSKTVLAIGPGPKE 180

Query: 181 AIDAVTGKLRLL 190
            IDAVTGKLRLL
Sbjct: 181 FIDAVTGKLRLL 192

BLAST of IVF0002656 vs. TAIR 10
Match: AT4G32900.2 (Peptidyl-tRNA hydrolase II (PTH2) family protein )

HSP 1 Score: 243.8 bits (621), Expect = 1.1e-64
Identity = 123/187 (65.78%), Postives = 152/187 (81.28%), Query Frame = 0

Query: 5   SKSSRKQVKPEKEWLSVSFKPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFLPSKYQQ 64
           + S  + ++ EK+ +SVSF+ EN IPG+VIGFI+G+ LDLS+      K+   L SK Q+
Sbjct: 7   NSSQPQAMRQEKKSISVSFRAENLIPGVVIGFIIGMILDLSQQVTSPVKRSRLLSSKVQK 66

Query: 65  LSPASNNG-DQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQWELCG 124
            S    NG DQELK+VLVVRQDLKM +GKIASQCAHAATG+YAELMQS R LLR+WE  G
Sbjct: 67  QSSVPGNGKDQELKMVLVVRQDLKMRTGKIASQCAHAATGMYAELMQSDRYLLRRWEENG 126

Query: 125 QPKIVVTCKNQHEMNKLKDAAENIGLPTFVVADAGRTQVSAGSKTVLAIGPGPKEAIDAV 184
           QPKIVVTCKNQ EMNK+ +AAE++GLPTFVVADAGRT+V+AGS+TVLA+GPGPKE +D++
Sbjct: 127 QPKIVVTCKNQQEMNKITEAAESVGLPTFVVADAGRTEVAAGSRTVLAVGPGPKELVDSI 186

Query: 185 TGKLRLL 191
           TG+L LL
Sbjct: 187 TGRLALL 193

BLAST of IVF0002656 vs. TAIR 10
Match: AT4G32900.1 (Peptidyl-tRNA hydrolase II (PTH2) family protein )

HSP 1 Score: 162.9 bits (411), Expect = 2.5e-40
Identity = 85/134 (63.43%), Postives = 102/134 (76.12%), Query Frame = 0

Query: 5   SKSSRKQVKPEKEWLSVSFKPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFLPSKYQQ 64
           + S  + ++ EK+ +SVSF+ EN IPG+VIGFI+G+ LDLS+      K+   L SK Q+
Sbjct: 7   NSSQPQAMRQEKKSISVSFRAENLIPGVVIGFIIGMILDLSQQVTSPVKRSRLLSSKVQK 66

Query: 65  LSPASNNG-DQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQWELCG 124
            S    NG DQELK+VLVVRQDLKM +GKIASQCAHAATG+YAELMQS R LLR+WE  G
Sbjct: 67  QSSVPGNGKDQELKMVLVVRQDLKMRTGKIASQCAHAATGMYAELMQSDRYLLRRWEENG 126

Query: 125 QPKIVVTCKNQHEM 138
           QPKIVVTCKNQ EM
Sbjct: 127 QPKIVVTCKNQQEM 140

BLAST of IVF0002656 vs. TAIR 10
Match: AT3G03010.1 (Peptidyl-tRNA hydrolase II (PTH2) family protein )

HSP 1 Score: 123.6 bits (309), Expect = 1.7e-28
Identity = 65/143 (45.45%), Postives = 93/143 (65.03%), Query Frame = 0

Query: 48  SKGNAKKGYFLPSKYQQLSPASNNGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAE 107
           S GN K     P + ++L+    N     K+VLVVR DLKMG GKIA+QC+HA  GLY +
Sbjct: 42  SSGNKKTKSKEPLEIEKLADFRKN----FKMVLVVRNDLKMGKGKIAAQCSHATLGLYKK 101

Query: 108 LMQSHRNLLRQWELCGQPKIVVTCKNQHEMNKLKDAAENIGLPTFVVADAGRTQVSAGSK 167
           L+Q     L +WE C QPK+VV  +++ EM  L++ A+ + LPT +  DAG+TQ++  S+
Sbjct: 102 LLQRAPKALNRWEYCAQPKVVVKIESEEEMLVLQERAKTLKLPTHITIDAGKTQIAPNSR 161

Query: 168 TVLAIGPGPKEAIDAVTGKLRLL 191
           TV+AI  GP + +D VTG L+L+
Sbjct: 162 TVMAI-LGPVDNVDEVTGGLKLM 179

BLAST of IVF0002656 vs. TAIR 10
Match: AT3G03010.2 (Peptidyl-tRNA hydrolase II (PTH2) family protein )

HSP 1 Score: 123.6 bits (309), Expect = 1.7e-28
Identity = 65/143 (45.45%), Postives = 93/143 (65.03%), Query Frame = 0

Query: 48  SKGNAKKGYFLPSKYQQLSPASNNGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAE 107
           S GN K     P + ++L+    N     K+VLVVR DLKMG GKIA+QC+HA  GLY +
Sbjct: 42  SSGNKKTKSKEPLEIEKLADFRKN----FKMVLVVRNDLKMGKGKIAAQCSHATLGLYKK 101

Query: 108 LMQSHRNLLRQWELCGQPKIVVTCKNQHEMNKLKDAAENIGLPTFVVADAGRTQVSAGSK 167
           L+Q     L +WE C QPK+VV  +++ EM  L++ A+ + LPT +  DAG+TQ++  S+
Sbjct: 102 LLQRAPKALNRWEYCAQPKVVVKIESEEEMLVLQERAKTLKLPTHITIDAGKTQIAPNSR 161

Query: 168 TVLAIGPGPKEAIDAVTGKLRLL 191
           TV+AI  GP + +D VTG L+L+
Sbjct: 162 TVMAI-LGPVDNVDEVTGGLKLM 179

BLAST of IVF0002656 vs. TAIR 10
Match: AT5G16870.1 (Peptidyl-tRNA hydrolase II (PTH2) family protein )

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-27
Identity = 60/116 (51.72%), Postives = 84/116 (72.41%), Query Frame = 0

Query: 75  ELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLRQWELCGQPKIVVTCKNQ 134
           + K+VLVVR DLKMG GKIA+QC+HA  GLY +L++     L  WE C QPK+VV  +++
Sbjct: 55  DFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLVRRAPKALDCWEECAQPKVVVKIEDE 114

Query: 135 HEMNKLKDAAENIGLPTFVVADAGRTQVSAGSKTVLAIGPGPKEAIDAVTGKLRLL 191
            EM +L++ A+++ LPT +  DAGRTQ++  S+TV+AI  GP E +D VTG L+LL
Sbjct: 115 DEMLELQERAKSLKLPTHITIDAGRTQIAPNSRTVMAI-LGPVEVVDEVTGGLKLL 169

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9Y3E58.6e-3044.10Peptidyl-tRNA hydrolase 2, mitochondrial OS=Homo sapiens OX=9606 GN=PTRH2 PE=1 S... [more]
Q3ZBL59.5e-2950.43Peptidyl-tRNA hydrolase 2, mitochondrial OS=Bos taurus OX=9913 GN=PTRH2 PE=2 SV=... [more]
Q8R2Y84.7e-2850.43Peptidyl-tRNA hydrolase 2, mitochondrial OS=Mus musculus OX=10090 GN=Ptrh2 PE=1 ... [more]
O970674.9e-2550.85Probable peptidyl-tRNA hydrolase 2 OS=Drosophila melanogaster OX=7227 GN=CG1307 ... [more]
O138308.3e-2535.90Probable peptidyl-tRNA hydrolase 2 OS=Schizosaccharomyces pombe (strain 972 / AT... [more]
Match NameE-valueIdentityDescription
A0A1S3CRS94.8e-10098.96Aminoacyl-tRNA hydrolase OS=Cucumis melo OX=3656 GN=LOC103503602 PE=4 SV=1[more]
A0A0A0LJW43.1e-9997.92Aminoacyl-tRNA hydrolase OS=Cucumis sativus OX=3659 GN=Csa_3G895670 PE=4 SV=1[more]
A0A1S3CQP03.2e-9692.20Aminoacyl-tRNA hydrolase OS=Cucumis melo OX=3656 GN=LOC103503602 PE=4 SV=1[more]
A0A6J1ISX61.0e-9493.23Aminoacyl-tRNA hydrolase OS=Cucurbita maxima OX=3661 GN=LOC111480317 PE=4 SV=1[more]
A0A6J1FS991.0e-9493.23Aminoacyl-tRNA hydrolase OS=Cucurbita moschata OX=3662 GN=LOC111446781 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_011652615.12.43e-13198.95peptidyl-tRNA hydrolase 2, mitochondrial isoform X2 [Cucumis sativus][more]
XP_008466065.12.15e-13098.96PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial isoform X2 [Cucumis melo][more]
XP_004136220.12.51e-12997.92peptidyl-tRNA hydrolase 2, mitochondrial isoform X1 [Cucumis sativus] >KGN60321.... [more]
XP_008466063.13.66e-12592.20PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial isoform X1 [Cucumis melo][more]
XP_022941498.12.22e-12393.23peptidyl-tRNA hydrolase 2, mitochondrial [Cucurbita moschata] >XP_022981057.1 pe... [more]
Match NameE-valueIdentityDescription
AT4G32900.21.1e-6465.78Peptidyl-tRNA hydrolase II (PTH2) family protein [more]
AT4G32900.12.5e-4063.43Peptidyl-tRNA hydrolase II (PTH2) family protein [more]
AT3G03010.11.7e-2845.45Peptidyl-tRNA hydrolase II (PTH2) family protein [more]
AT3G03010.21.7e-2845.45Peptidyl-tRNA hydrolase II (PTH2) family protein [more]
AT5G16870.11.1e-2751.72Peptidyl-tRNA hydrolase II (PTH2) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002833Peptidyl-tRNA hydrolase, PTH2PFAMPF01981PTH2coord: 76..190
e-value: 5.9E-44
score: 149.1
IPR002833Peptidyl-tRNA hydrolase, PTH2TIGRFAMTIGR00283TIGR00283coord: 76..190
e-value: 1.9E-38
score: 129.3
IPR002833Peptidyl-tRNA hydrolase, PTH2PANTHERPTHR12649PEPTIDYL-TRNA HYDROLASE 2coord: 6..190
IPR002833Peptidyl-tRNA hydrolase, PTH2CDDcd02430PTH2coord: 77..190
e-value: 2.37895E-58
score: 176.945
IPR023476Peptidyl-tRNA hydrolase II domain superfamilyGENE3D3.40.1490.10Bit1coord: 71..190
e-value: 5.2E-51
score: 173.6
IPR023476Peptidyl-tRNA hydrolase II domain superfamilySUPERFAMILY102462Peptidyl-tRNA hydrolase IIcoord: 75..190
NoneNo IPR availablePANTHERPTHR12649:SF11PEPTIDYL-TRNA HYDROLASE 2, MITOCHONDRIALcoord: 6..190

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0002656.2IVF0002656.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005829 cytosol
cellular_component GO:0005739 mitochondrion
molecular_function GO:0004045 aminoacyl-tRNA hydrolase activity