Sequences
The following sequences are available for this feature:
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAGATTAAATGACATAAATAAAAAATTGAAAAATAAGAAAGATGATGGAAAGAAATCGCATAAAAGAAAAAGAGAAAAGAAGAAAGACGAAATCGCAGGGGAAGACAGGGAAGACGAAATAACAAGAGGAAGACGAATCGCGAGAAAGAAAAGAAAGATGAAAGAGCAAACTTGGAATATTTAA
ATGGAAAGATTAAATGACATAAATAAAAAATTGAAAAATAAGAAAGATGATGGAAAGAAATCGCATAAAAGAAAAAGAGAAAAGAAGAAAGACGAAATCGCAGGGGAAGACAGGGAAGACGAAATAACAAGAGGAAGACGAATCGCGAGAAAGAAAAGAAAGATGAAAGAGCAAACTTGGAATATTTAA
ATGGAAAGATTAAATGACATAAATAAAAAATTGAAAAATAAGAAAGATGATGGAAAGAAATCGCATAAAAGAAAAAGAGAAAAGAAGAAAGACGAAATCGCAGGGGAAGACAGGGAAGACGAAATAACAAGAGGAAGACGAATCGCGAGAAAGAAAAGAAAGATGAAAGAGCAAACTTGGAATATTTAA
MERLNDINKKLKNKKDDGKKSHKRKREKKKDEIAGEDREDEITRGRRIARKKRKMKEQTWNI
Homology
BLAST of IVF0002640 vs. ExPASy TrEMBL
Match:
A0A5A7SVQ8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold261G00530 PE=4 SV=1)
HSP 1 Score: 55.1 bits (131), Expect = 1.2e-04
Identity = 30/44 (68.18%), Postives = 38/44 (86.36%), Query Frame = 0
BLAST of IVF0002640 vs. NCBI nr
Match:
KAA0033511.1 (hypothetical protein E6C27_scaffold261G00530 [Cucumis melo var. makuwa])
HSP 1 Score: 54.7 bits (130), Expect = 9.40e-07
Identity = 30/42 (71.43%), Postives = 36/42 (85.71%), Query Frame = 0
The following BLAST results are available for this feature:
Match Name E-value Identity Description
Match Name E-value Identity Description
A0A5A7SVQ8 1.2e-04 68.18 Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match Name E-value Identity Description
KAA0033511.1 9.40e-07 71.43 hypothetical protein E6C27_scaffold261G00530 [Cucumis melo var. makuwa] [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
A T G G A A A G A T T A A A T G A C A T A A A T A A A A A A T T G A A A A A T A A G A A A G A T G A T G G A A A G A A A T C G C A T A A A A G A A A A A G A G A A A A G A A G A A A G A C G A A A T C G C A G G G G A A G A C A G G G A A G A C G A A A T A A C A A G A G G A A G A C G A A T C G C G A G A A A G A A A A G A A A G A T G A A A G A G C A A A C T T G G A A T A T T T A A 20 40 60 80 100 120 140 160 180 Score = Score = Score = Sequence Coil mobidb-lite mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 1..39 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 28..46 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 1..62
Relationships
The following mRNA feature(s) are a part of this gene:
