IVF0002619 (gene) Melon (IVF77) v1

Overview
NameIVF0002619
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description60S ribosomal protein L9-like
Locationchr07: 15637168 .. 15639107 (+)
RNA-Seq ExpressionIVF0002619
SyntenyIVF0002619
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTGTTTTCTGTATATAACTCGTTTCCTCAGCATCCCTCCGCCTCCTGCCGCAGCCTTCCAAGTTTTCTGCCGCCGCTTCCCTGCGTCTCTTTTCAAACTTGAGAGTTAAATATGAAGACCATTCTTTCATCCGAGTCTATGGATATCCCAGATGGGGTCAAAATCAAGGTGCATGCCAAGATCATCGAGGTCGAAGGCCCTCGTGGTAAGCTTGTTCGCAACTTTAAGCACCTTAATCTCGACTTTCAACTTATCACTGACGAGGCTACCGGCAAGAAGAAGCTCCGCATCGAGGCCTGGTTCGGGTCCAGGAAGACATCCGCTGCTATTAGAACCGCTCTCAGCCATGTTGAGAACCTTATCACTGGTGTCACTAAGGGCTACCGTTACAAGATGCGTTTCGTCTACGCTCACTTTCCCATCAATGCTAGTATCACAAATGGCAGCAAGTCTATTGAGATTCGCAACTTTCTTGGTGAAAAGAAGGTGCCCTTTGCTCTATGCTTATAATGTTCATCATTCATTCCATTTTTTTTATCCCTATTATGTAAATTACTTCTTATACTCGTGTGGACCTGTGCCGTTACTTGTTTCTAAACTCGCGCTGTGGTTCGATACTTGCATATTTTATTTGTTGGATTCTATTTCCTGTTACGATTTTTACATGAAAAAACGAACCTTATGGTGTTCCTTAGCCCTGACCAATCTATGTCATATCGGTGGCAATATGTTTTTTTTTTATCGGTTTTTGATATATTTCTACCTGCATTGCTTTCAATGCCCGTCTTTGATGTTTGAATTACTAGTTTTACAAATGGGTACTCCCTCGTTACATGATTTCTTATTGGGTATCTATGGAGCAATACATAGAAGTTGAAGTTTATTGAATCTCATTACCAGTTCTGTTAGAAATTCAAATTTTGGTTAAACTATCTTATTAGAAGAGTCCTTAGCATATTGGCATTGGCATTGATTAATGAGACATCTTTCAAAAGTGACGATAACTTGTATGCTCATGAATATATTAAAAAAAGTAAGTGATATATCGCTGAACTCTACTAGATATCTGGCTTATTTCTTATAGGTTACTATTGTTTTTAATTCATTTTTTTAGCATTATCCTTGGATTTCATTTATTCATTTTTTTAGCATTATCCTTGGATTTCATTGAGTAGTTTGCACTAGATAGGATATTGCCCATACTTTTGTGAATTTGTTATGAACCATGCTCGCAATTGTTGCATCAGGTGAGAAAGGTGGATATGCTTGATGGAGTTTCCATTACCCGATCTGAAAAAGTGAAGGATGAGTTAGTTTTGGATGGAAATGACATTGAACTTGTGTCGCGGTCTTGTGCCCTAATAAACCAGGTTTGTCTTTTTTATACTCACATCCAAAGTTCGTAGCACATAGAGCCTTATTAGGCTTATTCTTCTTTGCCTTATTTTGCAGAAATGTCATGTCAAGAACAAGGATATACGGAAGTTTCTTGATGGTATTTATGTCAGCGAAAAGGGAACCATAGTTGGAGCAGATGAGTGATCAATACAATTGTAGGTTATATCTGCACTTAGTTTCAAGAGTTTGTTCTCTTTCGGAATTGTTTTTTCTCCATGACTAATAGCGTAAGTTTGTGATGTTTCTTTTTGTGTCCTATCTTTGAAAATACATTACAGTTTTGTTTTATAACAGTTTTTTAGTTAAGTCACAAAAACAATGCTCAGTAACTCTTTTTCACTTGATTTCTACTTTCGAATCTAATAATGATGATCTTAGGTTCTTAATGCGTGCATTGCATTAACATTATATTGATCCTGAATTCTTGGTTATGTGAAGCTTAGATGCTTGTTAACCCTTTATTTTAGAAAAATAACCCTGTAATGTATTTGCATTAACATTATGGATATAACTTCTTGGGAAATGTCTATATATATAGGGAG

mRNA sequence

CTGTTTTCTGTATATAACTCGTTTCCTCAGCATCCCTCCGCCTCCTGCCGCAGCCTTCCAAGTTTTCTGCCGCCGCTTCCCTGCGTCTCTTTTCAAACTTGAGAGTTAAATATGAAGACCATTCTTTCATCCGAGTCTATGGATATCCCAGATGGGGTCAAAATCAAGGTGCATGCCAAGATCATCGAGGTCGAAGGCCCTCGTGGTAAGCTTGTTCGCAACTTTAAGCACCTTAATCTCGACTTTCAACTTATCACTGACGAGGCTACCGGCAAGAAGAAGCTCCGCATCGAGGCCTGGTTCGGGTCCAGGAAGACATCCGCTGCTATTAGAACCGCTCTCAGCCATGTTGAGAACCTTATCACTGGTGTCACTAAGGGCTACCGTTACAAGATGCGTTTCGTCTACGCTCACTTTCCCATCAATGCTAGTATCACAAATGGCAGCAAGTCTATTGAGATTCGCAACTTTCTTGGTGAAAAGAAGGTGAGAAAGGTGGATATGCTTGATGGAGTTTCCATTACCCGATCTGAAAAAGTGAAGGATGAGTTAGTTTTGGATGGAAATGACATTGAACTTGTGTCGCGGTCTTGTGCCCTAATAAACCAGAAATGTCATGTCAAGAACAAGGATATACGGAAGTTTCTTGATGGTATTTATGTCAGCGAAAAGGGAACCATAGTTGGAGCAGATGAGTGATCAATACAATTGTAGGTTATATCTGCACTTAGTTTCAAGAGTTTGTTCTCTTTCGGAATTGTTTTTTCTCCATGACTAATAGCGTAAGTTTGTGATGTTTCTTTTTGTGTCCTATCTTTGAAAATACATTACAGTTTTGTTTTATAACAGTTTTTTAGTTAAGTCACAAAAACAATGCTCAGTAACTCTTTTTCACTTGATTTCTACTTTCGAATCTAATAATGATGATCTTAGGTTCTTAATGCGTGCATTGCATTAACATTATATTGATCCTGAATTCTTGGTTATGTGAAGCTTAGATGCTTGTTAACCCTTTATTTTAGAAAAATAACCCTGTAATGTATTTGCATTAACATTATGGATATAACTTCTTGGGAAATGTCTATATATATAGGGAG

Coding sequence (CDS)

ATGAAGACCATTCTTTCATCCGAGTCTATGGATATCCCAGATGGGGTCAAAATCAAGGTGCATGCCAAGATCATCGAGGTCGAAGGCCCTCGTGGTAAGCTTGTTCGCAACTTTAAGCACCTTAATCTCGACTTTCAACTTATCACTGACGAGGCTACCGGCAAGAAGAAGCTCCGCATCGAGGCCTGGTTCGGGTCCAGGAAGACATCCGCTGCTATTAGAACCGCTCTCAGCCATGTTGAGAACCTTATCACTGGTGTCACTAAGGGCTACCGTTACAAGATGCGTTTCGTCTACGCTCACTTTCCCATCAATGCTAGTATCACAAATGGCAGCAAGTCTATTGAGATTCGCAACTTTCTTGGTGAAAAGAAGGTGAGAAAGGTGGATATGCTTGATGGAGTTTCCATTACCCGATCTGAAAAAGTGAAGGATGAGTTAGTTTTGGATGGAAATGACATTGAACTTGTGTCGCGGTCTTGTGCCCTAATAAACCAGAAATGTCATGTCAAGAACAAGGATATACGGAAGTTTCTTGATGGTATTTATGTCAGCGAAAAGGGAACCATAGTTGGAGCAGATGAGTGA

Protein sequence

MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRIEAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKSIEIRNFLGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTIVGADE
Homology
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BLAST of IVF0002619 vs. ExPASy Swiss-Prot
Match: P30707 (60S ribosomal protein L9 OS=Pisum sativum OX=3888 GN=RPL9 PE=2 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 1.8e-91
Identity = 170/191 (89.01%), Postives = 182/191 (95.29%), Query Frame = 0 

Query: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60
           MKTILSSE+M+IPDGV IKV+AK+IEVEGPRGKLVR+FKHLNLDF LITDE  GKKKL+I
Sbjct: 1   MKTILSSETMNIPDGVTIKVNAKVIEVEGPRGKLVRDFKHLNLDFDLITDE-NGKKKLKI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKSIEIRNF 120
           +AWFGSRKTSAAIRTALSHVENLITGVTKG+RYKMRFVYA FPINASITN +KSIEIRNF
Sbjct: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGFRYKMRFVYADFPINASITNDNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVD+LDGVSI RSEKVKDE+VLDGNDIELVSRSCALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVDLLDGVSIIRSEKVKDEVVLDGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGTIV 192
           GIYVSEKG +V
Sbjct: 181 GIYVSEKGAVV 190

[Close]
BLAST of IVF0002619 vs. ExPASy Swiss-Prot
Match: P49209 (60S ribosomal protein L9-1 OS=Arabidopsis thaliana OX=3702 GN=RPL9B PE=1 SV=3)

HSP 1 Score: 330.1 bits (845), Expect = 1.7e-89
Identity = 163/191 (85.34%), Postives = 178/191 (93.19%), Query Frame = 0 

Query: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60
           MKTILSSE+MDIPD V IKVHAK+IEVEGPRGKLVR+FKHLNLDFQLI D  TGKKKL+I
Sbjct: 1   MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKSIEIRNF 120
           ++WFG+RKTSA+IRTALSHV+NLI+GVT+G+RYKMRFVYAHFPINASI    KSIEIRNF
Sbjct: 61  DSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKV+MLDGV+I RSEKVKDE+VLDGNDIELVSRSCALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGTIV 192
           GIYVSEK  IV
Sbjct: 181 GIYVSEKSKIV 191

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BLAST of IVF0002619 vs. ExPASy Swiss-Prot
Match: Q9SZX9 (60S ribosomal protein L9-2 OS=Arabidopsis thaliana OX=3702 GN=RPL9D PE=2 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 2.1e-87
Identity = 157/190 (82.63%), Postives = 177/190 (93.16%), Query Frame = 0 

Query: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60
           MKTILSSE+MDIPDGV IKV+AK+IEVEGPRGKL R+FKHLNLDFQLI D+ TGK++L+I
Sbjct: 1   MKTILSSETMDIPDGVAIKVNAKVIEVEGPRGKLTRDFKHLNLDFQLIKDQVTGKRQLKI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKSIEIRNF 120
           ++WFGSRKTSA+IRTALSHV+NLI GVT+G+ Y+MRFVYAHFPINASI   +KSIEIRNF
Sbjct: 61  DSWFGSRKTSASIRTALSHVDNLIAGVTQGFLYRMRFVYAHFPINASIDGNNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKV+MLDGV I RSEKVKDE++L+GNDIELVSRSCALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVKIVRSEKVKDEIILEGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGTI 191
           GIYVSEKG I
Sbjct: 181 GIYVSEKGKI 190

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BLAST of IVF0002619 vs. ExPASy Swiss-Prot
Match: P49210 (60S ribosomal protein L9 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL9 PE=2 SV=3)

HSP 1 Score: 311.2 bits (796), Expect = 8.1e-84
Identity = 153/190 (80.53%), Postives = 175/190 (92.11%), Query Frame = 0 

Query: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60
           MKTIL+SE+M+IP+GV ++V AK++ VEGPRGKL RNFKHLNLDFQL+     G +KL++
Sbjct: 1   MKTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLL----EGGRKLQV 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKSIEIRNF 120
           +AWFG+R+T AAIRTA+SHV+NLITGVTKGYRYKMRFVYAHFPINASITN + +IEIRNF
Sbjct: 61  DAWFGTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDML+GV+I RSEKVKDELVLDGNDIELVSRS ALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTI 191
           GIYVS+KGTI
Sbjct: 181 GIYVSDKGTI 186

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BLAST of IVF0002619 vs. ExPASy Swiss-Prot
Match: P51410 (60S ribosomal protein L9 OS=Mus musculus OX=10090 GN=Rpl9 PE=1 SV=2)

HSP 1 Score: 225.3 bits (573), Expect = 5.9e-58
Identity = 112/195 (57.44%), Postives = 146/195 (74.87%), Query Frame = 0 

Query: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60
           MKTILS++++DIP+ V+I +  + + V+GPRG L R+F H+N++  L+  +   KK+LR+
Sbjct: 1   MKTILSNQTVDIPENVEITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRV 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKSIEIRNF 120
           + W+G+RK  A +RT  SHV+N+I GVT G+RYKMR VYAHFPIN  I      +EIRNF
Sbjct: 61  DKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEK +R+V M  GV+ + S+  KDEL+L+GNDIELVS S ALI Q   VKNKDIRKFLD
Sbjct: 121 LGEKYIRRVRMRTGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLD 180

Query: 181 GIYVSEKGTIVGADE 196
           GIYVSEKGT+  ADE
Sbjct: 181 GIYVSEKGTVQQADE 192

[Close]
BLAST of IVF0002619 vs. ExPASy TrEMBL
Match: A0A1S3CHZ9 (60S ribosomal protein L9-like OS=Cucumis melo OX=3656 GN=LOC103501171 PE=3 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.3e-103
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0 

Query: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60
           MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI
Sbjct: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKSIEIRNF 120
           EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKSIEIRNF
Sbjct: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTIVGADE 196
           GIYVSEKGTIVGADE
Sbjct: 181 GIYVSEKGTIVGADE 195

[Close]
BLAST of IVF0002619 vs. ExPASy TrEMBL
Match: A0A5D3C0B3 (60S ribosomal protein L9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold351G00160 PE=3 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.3e-103
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0 

Query: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60
           MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI
Sbjct: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKSIEIRNF 120
           EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKSIEIRNF
Sbjct: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTIVGADE 196
           GIYVSEKGTIVGADE
Sbjct: 181 GIYVSEKGTIVGADE 195

[Close]
BLAST of IVF0002619 vs. ExPASy TrEMBL
Match: A0A6J1G231 (60S ribosomal protein L9-like OS=Cucurbita moschata OX=3662 GN=LOC111449954 PE=3 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 1.4e-102
Identity = 193/195 (98.97%), Postives = 194/195 (99.49%), Query Frame = 0 

Query: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60
           MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI
Sbjct: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKSIEIRNF 120
           EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKSIEIRNF
Sbjct: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTIVGADE 196
           GIYVSEKGTIVG +E
Sbjct: 181 GIYVSEKGTIVGEEE 195

[Close]
BLAST of IVF0002619 vs. ExPASy TrEMBL
Match: A0A0A0KW25 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G124900 PE=3 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 3.1e-102
Identity = 191/195 (97.95%), Postives = 194/195 (99.49%), Query Frame = 0 

Query: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60
           MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITD+ATGKKKLRI
Sbjct: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDDATGKKKLRI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKSIEIRNF 120
           EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSK+IEIRNF
Sbjct: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKAIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTIVGADE 196
           GIYVSEKGTI+G DE
Sbjct: 181 GIYVSEKGTIIGEDE 195

[Close]
BLAST of IVF0002619 vs. ExPASy TrEMBL
Match: A0A6J1HZM6 (60S ribosomal protein L9-like OS=Cucurbita maxima OX=3661 GN=LOC111467681 PE=3 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 6.9e-102
Identity = 192/195 (98.46%), Postives = 193/195 (98.97%), Query Frame = 0 

Query: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60
           MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI
Sbjct: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKSIEIRNF 120
           EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITN SKSIEIRNF
Sbjct: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSSKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTIVGADE 196
           GIYVSEKGTIVG +E
Sbjct: 181 GIYVSEKGTIVGEEE 195

[Close]
BLAST of IVF0002619 vs. NCBI nr
Match: XP_008462900.1 (PREDICTED: 60S ribosomal protein L9-like [Cucumis melo] >XP_016902942.1 PREDICTED: 60S ribosomal protein L9-like [Cucumis melo] >KAA0056651.1 60S ribosomal protein L9-like [Cucumis melo var. makuwa] >TYK04612.1 60S ribosomal protein L9-like [Cucumis melo var. makuwa])

HSP 1 Score: 384 bits (987), Expect = 1.58e-134
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0 

Query: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60
           MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI
Sbjct: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKSIEIRNF 120
           EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKSIEIRNF
Sbjct: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTIVGADE 195
           GIYVSEKGTIVGADE
Sbjct: 181 GIYVSEKGTIVGADE 195

[Close]
BLAST of IVF0002619 vs. NCBI nr
Match: XP_022945825.1 (60S ribosomal protein L9-like [Cucurbita moschata] >XP_023542544.1 60S ribosomal protein L9-like [Cucurbita pepo subsp. pepo] >KAG6574272.1 60S ribosomal protein L9, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013341.1 60S ribosomal protein L9, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 381 bits (978), Expect = 3.85e-133
Identity = 193/195 (98.97%), Postives = 194/195 (99.49%), Query Frame = 0 

Query: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60
           MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI
Sbjct: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKSIEIRNF 120
           EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKSIEIRNF
Sbjct: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTIVGADE 195
           GIYVSEKGTIVG +E
Sbjct: 181 GIYVSEKGTIVGEEE 195

[Close]
BLAST of IVF0002619 vs. NCBI nr
Match: XP_038897570.1 (60S ribosomal protein L9-like [Benincasa hispida])

HSP 1 Score: 380 bits (977), Expect = 5.28e-133
Identity = 193/195 (98.97%), Postives = 193/195 (98.97%), Query Frame = 0 

Query: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60
           MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI
Sbjct: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKSIEIRNF 120
           EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITN SKSIEIRNF
Sbjct: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNNSKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTIVGADE 195
           GIYVSEKGTIVG DE
Sbjct: 181 GIYVSEKGTIVGGDE 195

[Close]
BLAST of IVF0002619 vs. NCBI nr
Match: XP_004137145.1 (60S ribosomal protein L9 [Cucumis sativus] >KGN53768.1 hypothetical protein Csa_014503 [Cucumis sativus])

HSP 1 Score: 380 bits (975), Expect = 1.06e-132
Identity = 191/195 (97.95%), Postives = 194/195 (99.49%), Query Frame = 0 

Query: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60
           MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITD+ATGKKKLRI
Sbjct: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDDATGKKKLRI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKSIEIRNF 120
           EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSK+IEIRNF
Sbjct: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKAIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTIVGADE 195
           GIYVSEKGTI+G DE
Sbjct: 181 GIYVSEKGTIIGEDE 195

[Close]
BLAST of IVF0002619 vs. NCBI nr
Match: XP_022968434.1 (60S ribosomal protein L9-like [Cucurbita maxima])

HSP 1 Score: 379 bits (972), Expect = 3.16e-132
Identity = 192/195 (98.46%), Postives = 193/195 (98.97%), Query Frame = 0 

Query: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60
           MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI
Sbjct: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKSIEIRNF 120
           EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITN SKSIEIRNF
Sbjct: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSSKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTIVGADE 195
           GIYVSEKGTIVG +E
Sbjct: 181 GIYVSEKGTIVGEEE 195

[Close]
BLAST of IVF0002619 vs. TAIR 10
Match: AT1G33120.1 (Ribosomal protein L6 family )

HSP 1 Score: 330.1 bits (845), Expect = 1.2e-90
Identity = 163/191 (85.34%), Postives = 178/191 (93.19%), Query Frame = 0 

Query: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60
           MKTILSSE+MDIPD V IKVHAK+IEVEGPRGKLVR+FKHLNLDFQLI D  TGKKKL+I
Sbjct: 1   MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKSIEIRNF 120
           ++WFG+RKTSA+IRTALSHV+NLI+GVT+G+RYKMRFVYAHFPINASI    KSIEIRNF
Sbjct: 61  DSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKV+MLDGV+I RSEKVKDE+VLDGNDIELVSRSCALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGTIV 192
           GIYVSEK  IV
Sbjct: 181 GIYVSEKSKIV 191

[Close]
BLAST of IVF0002619 vs. TAIR 10
Match: AT1G33140.1 (Ribosomal protein L6 family )

HSP 1 Score: 330.1 bits (845), Expect = 1.2e-90
Identity = 163/191 (85.34%), Postives = 178/191 (93.19%), Query Frame = 0 

Query: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60
           MKTILSSE+MDIPD V IKVHAK+IEVEGPRGKLVR+FKHLNLDFQLI D  TGKKKL+I
Sbjct: 1   MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKSIEIRNF 120
           ++WFG+RKTSA+IRTALSHV+NLI+GVT+G+RYKMRFVYAHFPINASI    KSIEIRNF
Sbjct: 61  DSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKV+MLDGV+I RSEKVKDE+VLDGNDIELVSRSCALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGTIV 192
           GIYVSEK  IV
Sbjct: 181 GIYVSEKSKIV 191

[Close]
BLAST of IVF0002619 vs. TAIR 10
Match: AT4G10450.1 (Ribosomal protein L6 family )

HSP 1 Score: 323.2 bits (827), Expect = 1.5e-88
Identity = 157/190 (82.63%), Postives = 177/190 (93.16%), Query Frame = 0 

Query: 1   MKTILSSESMDIPDGVKIKVHAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLRI 60
           MKTILSSE+MDIPDGV IKV+AK+IEVEGPRGKL R+FKHLNLDFQLI D+ TGK++L+I
Sbjct: 1   MKTILSSETMDIPDGVAIKVNAKVIEVEGPRGKLTRDFKHLNLDFQLIKDQVTGKRQLKI 60

Query: 61  EAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGSKSIEIRNF 120
           ++WFGSRKTSA+IRTALSHV+NLI GVT+G+ Y+MRFVYAHFPINASI   +KSIEIRNF
Sbjct: 61  DSWFGSRKTSASIRTALSHVDNLIAGVTQGFLYRMRFVYAHFPINASIDGNNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSITRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLD 180
           LGEKKVRKV+MLDGV I RSEKVKDE++L+GNDIELVSRSCALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVKIVRSEKVKDEIILEGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGTI 191
           GIYVSEKG I
Sbjct: 181 GIYVSEKGKI 190

The following BLAST results are available for this feature:
BLAST of IVF0002619 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P307071.8e-9189.0160S ribosomal protein L9 OS=Pisum sativum OX=3888 GN=RPL9 PE=2 SV=1[more]
P492091.7e-8985.3460S ribosomal protein L9-1 OS=Arabidopsis thaliana OX=3702 GN=RPL9B PE=1 SV=3[more]
Q9SZX92.1e-8782.6360S ribosomal protein L9-2 OS=Arabidopsis thaliana OX=3702 GN=RPL9D PE=2 SV=1[more]
P492108.1e-8480.5360S ribosomal protein L9 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL9 PE=2 S... [more]
P514105.9e-5857.4460S ribosomal protein L9 OS=Mus musculus OX=10090 GN=Rpl9 PE=1 SV=2[more]
BLAST of IVF0002619 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CHZ91.3e-103100.0060S ribosomal protein L9-like OS=Cucumis melo OX=3656 GN=LOC103501171 PE=3 SV=1[more]
A0A5D3C0B31.3e-103100.0060S ribosomal protein L9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... [more]
A0A6J1G2311.4e-10298.9760S ribosomal protein L9-like OS=Cucurbita moschata OX=3662 GN=LOC111449954 PE=3... [more]
A0A0A0KW253.1e-10297.95Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G124900 PE=3 SV=1[more]
A0A6J1HZM66.9e-10298.4660S ribosomal protein L9-like OS=Cucurbita maxima OX=3661 GN=LOC111467681 PE=3 S... [more]
BLAST of IVF0002619 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008462900.11.58e-134100.00PREDICTED: 60S ribosomal protein L9-like [Cucumis melo] >XP_016902942.1 PREDICTE... [more]
XP_022945825.13.85e-13398.9760S ribosomal protein L9-like [Cucurbita moschata] >XP_023542544.1 60S ribosomal... [more]
XP_038897570.15.28e-13398.9760S ribosomal protein L9-like [Benincasa hispida][more]
XP_004137145.11.06e-13297.9560S ribosomal protein L9 [Cucumis sativus] >KGN53768.1 hypothetical protein Csa_... [more]
XP_022968434.13.16e-13298.4660S ribosomal protein L9-like [Cucurbita maxima][more]
BLAST of IVF0002619 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G33120.11.2e-9085.34Ribosomal protein L6 family [more]
AT1G33140.11.2e-9085.34Ribosomal protein L6 family [more]
AT4G10450.11.5e-8882.63Ribosomal protein L6 family [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036789Ribosomal protein L6, alpha-beta domain superfamilyGENE3D3.90.930.12coord: 91..195
e-value: 7.7E-52
score: 175.7
IPR036789Ribosomal protein L6, alpha-beta domain superfamilyGENE3D3.90.930.12coord: 1..90
e-value: 4.8E-29
score: 102.7
IPR036789Ribosomal protein L6, alpha-beta domain superfamilySUPERFAMILY56053Ribosomal protein L6coord: 1..90
IPR036789Ribosomal protein L6, alpha-beta domain superfamilySUPERFAMILY56053Ribosomal protein L6coord: 91..187
IPR020040Ribosomal protein L6, alpha-beta domainPFAMPF00347Ribosomal_L6coord: 107..181
e-value: 3.5E-12
score: 46.8
coord: 12..90
e-value: 6.7E-11
score: 42.7
IPR000702Ribosomal protein L6PIRSFPIRSF002162RPL6p_RPL6a_RPL9e_RPL9ocoord: 1..190
e-value: 6.8E-30
score: 101.8
IPR000702Ribosomal protein L6PANTHERPTHR1165560S/50S RIBOSOMAL PROTEIN L6/L9coord: 1..192
NoneNo IPR availablePANTHERPTHR11655:SF4060S RIBOSOMAL PROTEIN L9-LIKEcoord: 1..192
IPR002359Ribosomal protein L6, conserved site-2PROSITEPS00700RIBOSOMAL_L6_2coord: 166..187

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0002619.2IVF0002619.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0002181 cytoplasmic translation
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome