IVF0002607 (gene) Melon (IVF77) v1

Overview


Name	IVF0002607
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Unknown protein
Location	chr08: 16879102 .. 16879612 (+)
RNA-Seq Expression	IVF0002607
Synteny	IVF0002607

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGCAACTCCGAAAAGACAACAATGGTGCAACTTCGCTTCTACCTCTCCAAGATGATGACGATGCTGAAACTTTGCCTCCAGCTATTCAAGATAACGATGACGGTACAACCACCTCTAACTCTGCAAGATGGAGATGATGGGGAAGTTCTGACTCCCTCTATCTAAGATTAGGACAGTGCAACTCCTCCTCCGCTTCTTTAAGAGGACGACGATGGTACAGTTTCGCCTCCACCTCTTTATGAAGATGACGATGGTGTAGCTCTGCCTCCACTTCTCTAAAATGATGATGATGGTGCAGCTCTGCCTCTGCCTCTCCAAAAATATAACAATTATGCAGCTTCACCTCTGCTTATCCAAGAAGACGACGATGTTGCAGCTCCACCTCTGCCTCTTCAAGCGCCTCTACCTCTTCAAAAAGATAACAATGATATAGCTCTACCTTCGTCTCTCCAAGATAAAGATGGTGCAGTTCTTCCTCTTCAAAATGATGGCAAAGTAGAGCTATGA

mRNA sequence

ATGGTGCAACTCCGAAAAGACAACAATGGTGCAACTTCGCTTCTACCTCTCCAAGATGATGACGATGCTGAAACTTTGCCTCCAGCTATTCAAGATAACGATGACGCTCTGCCTCTGCCTCTCCAAAAATATAACAATTATGCAGCTTCACCTCTGCTTATCCAAGAAGACGACGATGTTGCAGCTCCACCTCTGCCTCTTCAAGCGCCTCTACCTCTTCAAAAAGATAACAATGATATAGCTCTACCTTCGTCTCTCCAAGATAAAGATGGTGCAGTTCTTCCTCTTCAAAATGATGGCAAAGTAGAGCTATGA

Coding sequence (CDS)

ATGGTGCAACTCCGAAAAGACAACAATGGTGCAACTTCGCTTCTACCTCTCCAAGATGATGACGATGCTGAAACTTTGCCTCCAGCTATTCAAGATAACGATGACGCTCTGCCTCTGCCTCTCCAAAAATATAACAATTATGCAGCTTCACCTCTGCTTATCCAAGAAGACGACGATGTTGCAGCTCCACCTCTGCCTCTTCAAGCGCCTCTACCTCTTCAAAAAGATAACAATGATATAGCTCTACCTTCGTCTCTCCAAGATAAAGATGGTGCAGTTCTTCCTCTTCAAAATGATGGCAAAGTAGAGCTATGA

Protein sequence

MVQLRKDNNGATSLLPLQDDDDAETLPPAIQDNDDALPLPLQKYNNYAASPLLIQEDDDVAAPPLPLQAPLPLQKDNNDIALPSSLQDKDGAVLPLQNDGKVEL

Homology

[Close]

BLAST of IVF0002607 vs. ExPASy TrEMBL
Match: A0A5A7V9J5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold403G001220 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 5.8e-07
Identity = 44/110 (40.00%), Postives = 61/110 (55.45%), Query Frame = 0


Query: 1   MVQLRKDNNGATSLLPLQDDDDAETLPPAIQDNDDALPLPLQKYNN------YAASPLLI 60
           MVQLR+D++GAT   PL DD+D  T  P ++ +DD L L + K         Y +   ++
Sbjct: 157 MVQLREDDDGATLPPPLHDDNDDATSFPHLESDDDELCLCVSKMMTMLLLCFYISKMTML 216

Query: 61  QEDDDVAAPPLPLQ-------APLPLQKDNNDIALPSSLQDKDGAVLPLQ 98
           QE DD  A PLPLQ        PLP+Q+D++D  LP  +  KD   L L+
Sbjct: 217 QEYDDGKARPLPLQKDDASAAPPLPIQEDDDDATLP-RISKKDKVQLHLR 265

[Close]

BLAST of IVF0002607 vs. ExPASy TrEMBL
Match: A0A5A7VCP5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2030G00020 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 9.9e-07
Identity = 40/90 (44.44%), Postives = 54/90 (60.00%), Query Frame = 0


Query: 8   NNGATSLLPLQDDDDAETLPPAIQDNDDALPLPLQKYNNYAASPLLIQEDDDVAAPPLPL 67
           N+G T  LPLQ+ D+   LP   +D+D AL LPLQ  ++  A PL  QE+DD  AP    
Sbjct: 30  NDGETPPLPLQEADNGAALPLQEKDDDAALSLPLQVKDDGVALPL--QENDDGTAP---- 89

Query: 68  QAPLPLQKDNNDIALPSSLQDKDGAVLPLQ 98
             PLPLQ+++ND  LP   Q++D   L L+
Sbjct: 90  --PLPLQEEDNDATLPLRFQEEDMVQLCLR 111

[Close]

BLAST of IVF0002607 vs. ExPASy TrEMBL
Match: A0A5D3BT38 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold388G00380 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.3e-06
Identity = 31/68 (45.59%), Postives = 44/68 (64.71%), Query Frame = 0


Query: 36  ALPLPLQKYNNYAASPLLIQEDDDVAAPPLPLQAPLPLQKDNNDIALPSSLQDKDGAVLP 95
           ALPLP  + ++ +  PL +QE+D+  A       PLP ++D+N +A P  LQD+DG +LP
Sbjct: 43  ALPLPFHEKDDGSVFPLSLQEEDNSVA------LPLPFKEDDNGVASPPLLQDEDGTILP 102

Query: 96  LQNDGKVE 104
           LQND K E
Sbjct: 103 LQNDDKAE 104

[Close]

BLAST of IVF0002607 vs. ExPASy TrEMBL
Match: A0A5D3C4D7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold287G00470 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 8.4e-06
Identity = 37/75 (49.33%), Postives = 47/75 (62.67%), Query Frame = 0


Query: 29  AIQDNDDALPLPLQKYNNYAASPLLIQEDDDVAAPPLPLQAPLPLQKDNNDIALPSSLQD 88
           AI+ +D AL   L K      + + +QEDDD  APPLPLQ      +D +D+ALPS LQD
Sbjct: 69  AIECDDGALNPYLSK-----RTMVQLQEDDDGEAPPLPLQEE---NEDEDDVALPSPLQD 128

Query: 89  KDGAVLPLQNDGKVE 104
           +DG V  LQNDG+ E
Sbjct: 129 EDGIVSSLQNDGRAE 135

[Close]

BLAST of IVF0002607 vs. ExPASy TrEMBL
Match: A0A5A7T1T0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00470 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.9e-05
Identity = 49/110 (44.55%), Postives = 58/110 (52.73%), Query Frame = 0


Query: 6   KDNNGATSLLPLQDDDDAETLPPAIQDNDDAL--PLPLQK---YNNYAASPLLIQEDDD- 65
           +++NGA    PLQ DD A T P  +QD+DD +  PLPLQ     +N    PL + +DDD 
Sbjct: 29  RNDNGAARPPPLQKDDGA-TPPLPLQDDDDGIAPPLPLQNDDDDDNGTTPPLQLHDDDDG 88

Query: 66  VAAPPLPLQ-------APLPLQKDNNDIALPSSLQDKDGAVLPLQNDGKV 103
           V    L L         PL LQ D    A PSSLQD  G  LPLQ DG V
Sbjct: 89  VVCLHLHLSKMIDGAAQPLRLQNDYG-AAPPSSLQDHGGTALPLQKDGGV 136

[Close]

BLAST of IVF0002607 vs. NCBI nr
Match: TYK02148.1 (hypothetical protein E5676_scaffold388G00380 [Cucumis melo var. makuwa])

HSP 1 Score: 60.1 bits (144), Expect = 5.82e-09
Identity = 31/68 (45.59%), Postives = 44/68 (64.71%), Query Frame = 0


Query: 36  ALPLPLQKYNNYAASPLLIQEDDDVAAPPLPLQAPLPLQKDNNDIALPSSLQDKDGAVLP 95
           ALPLP  + ++ +  PL +QE+D+  A       PLP ++D+N +A P  LQD+DG +LP
Sbjct: 43  ALPLPFHEKDDGSVFPLSLQEEDNSVA------LPLPFKEDDNGVASPPLLQDEDGTILP 102

Query: 96  LQNDGKVE 103
           LQND K E
Sbjct: 103 LQNDDKAE 104

[Close]

BLAST of IVF0002607 vs. NCBI nr
Match: KAA0064146.1 (hypothetical protein E6C27_scaffold548G00680 [Cucumis melo var. makuwa] >TYK28593.1 hypothetical protein E5676_scaffold2030G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 58.5 bits (140), Expect = 4.85e-08
Identity = 40/90 (44.44%), Postives = 54/90 (60.00%), Query Frame = 0


Query: 8   NNGATSLLPLQDDDDAETLPPAIQDNDDALPLPLQKYNNYAASPLLIQEDDDVAAPPLPL 67
           N+G T  LPLQ+ D+   LP   +D+D AL LPLQ  ++  A PL  QE+DD  APPLPL
Sbjct: 30  NDGETPPLPLQEADNGAALPLQEKDDDAALSLPLQVKDDGVALPL--QENDDGTAPPLPL 89

Query: 68  QAPLPLQKDNNDIALPSSLQDKDGAVLPLQ 97
           Q      +++ND  LP   Q++D   L L+
Sbjct: 90  Q------EEDNDATLPLRFQEEDMVQLCLR 111

[Close]

BLAST of IVF0002607 vs. NCBI nr
Match: TYK06190.1 (uncharacterized protein E5676_scaffold287G00470 [Cucumis melo var. makuwa])

HSP 1 Score: 57.4 bits (137), Expect = 1.19e-07
Identity = 30/50 (60.00%), Postives = 36/50 (72.00%), Query Frame = 0


Query: 54  IQEDDDVAAPPLPLQAPLPLQKDNNDIALPSSLQDKDGAVLPLQNDGKVE 103
           +QEDDD  APPLPLQ      +D +D+ALPS LQD+DG V  LQNDG+ E
Sbjct: 89  LQEDDDGEAPPLPLQEE---NEDEDDVALPSPLQDEDGIVSSLQNDGRAE 135

[Close]

BLAST of IVF0002607 vs. NCBI nr
Match: KAA0062545.1 (hypothetical protein E6C27_scaffold79G00200 [Cucumis melo var. makuwa] >TYK28767.1 hypothetical protein E5676_scaffold403G001220 [Cucumis melo var. makuwa])

HSP 1 Score: 58.9 bits (141), Expect = 1.54e-07
Identity = 40/96 (41.67%), Postives = 55/96 (57.29%), Query Frame = 0


Query: 1   MVQLRKDNNGATSLLPLQDDDDAETLPPAIQDNDDALPLPLQKYNN------YAASPLLI 60
           MVQLR+D++GAT   PL DD+D  T  P ++ +DD L L + K         Y +   ++
Sbjct: 157 MVQLREDDDGATLPPPLHDDNDDATSFPHLESDDDELCLCVSKMMTMLLLCFYISKMTML 216

Query: 61  QEDDDVAAPPLPLQA-------PLPLQKDNNDIALP 83
           QE DD  A PLPLQ        PLP+Q+D++D  LP
Sbjct: 217 QEYDDGKARPLPLQKDDASAAPPLPIQEDDDDATLP 252

[Close]

BLAST of IVF0002607 vs. NCBI nr
Match: KAA0035405.1 (uncharacterized protein E6C27_scaffold285G00180 [Cucumis melo var. makuwa] >TYK25750.1 uncharacterized protein E5676_scaffold862G00470 [Cucumis melo var. makuwa])

HSP 1 Score: 54.3 bits (129), Expect = 1.47e-06
Identity = 52/114 (45.61%), Postives = 59/114 (51.75%), Query Frame = 0


Query: 2   VQLRKDNNGATSLLPLQDDDDAETLPPAIQDNDDAL--PLPLQKYN---NYAASPLLIQE 61
           + LR DN GA    PLQ DD A T P  +QD+DD +  PLPLQ  +   N    PL + +
Sbjct: 26  LSLRNDN-GAARPPPLQKDDGA-TPPLPLQDDDDGIAPPLPLQNDDDDDNGTTPPLQLHD 85

Query: 62  DDD-VAAPPLPLQA-------PLPLQKDNNDIALPSSLQDKDGAVLPLQNDGKV 102
           DDD V    L L         PL LQ D    A PSSLQD  G  LPLQ DG V
Sbjct: 86  DDDGVVCLHLHLSKMIDGAAQPLRLQNDYG-AAPPSSLQDHGGTALPLQKDGGV 136

The following BLAST results are available for this feature:

BLAST of IVF0002607 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0002607 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V9J5	5.8e-07	40.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7VCP5	9.9e-07	44.44	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3BT38	1.3e-06	45.59	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3C4D7	8.4e-06	49.33	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7T1T0	1.9e-05	44.55	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of IVF0002607 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK02148.1	5.82e-09	45.59	hypothetical protein E5676_scaffold388G00380 [Cucumis melo var. makuwa]	[more]
KAA0064146.1	4.85e-08	44.44	hypothetical protein E6C27_scaffold548G00680 [Cucumis melo var. makuwa] >TYK2859...	[more]
TYK06190.1	1.19e-07	60.00	uncharacterized protein E5676_scaffold287G00470 [Cucumis melo var. makuwa]	[more]
KAA0062545.1	1.54e-07	41.67	hypothetical protein E6C27_scaffold79G00200 [Cucumis melo var. makuwa] >TYK28767...	[more]
KAA0035405.1	1.47e-06	45.61	uncharacterized protein E6C27_scaffold285G00180 [Cucumis melo var. makuwa] >TYK2...	[more]

BLAST of IVF0002607 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0002607.1	IVF0002607.1	mRNA