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IVF0002548 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCCAGGATGATGTACGCGCTTCACACCCTGCTCGCGCATCGAAGGGTCGGCCTGGATCTAATGGATCAAAGCGATGGAGGGGAGGGCAGCGGGTGGGTGCAATTAAGATTACTCATCAGGCACTGGAGTGTGCAAATAACCAGCTGAGGTTAATTGCAGAGTGGCCTTCGCACGCACTATAA ATGTCCCAGGATGATGTACGCGCTTCACACCCTGCTCGCGCATCGAAGGGTCGGCCTGGATCTAATGGATCAAAGCGATGGAGGGGAGGGCAGCGGGTGGGTGCAATTAAGATTACTCATCAGGCACTGGAGTGTGCAAATAACCAGCTGAGGTTAATTGCAGAGTGGCCTTCGCACGCACTATAA ATGTCCCAGGATGATGTACGCGCTTCACACCCTGCTCGCGCATCGAAGGGTCGGCCTGGATCTAATGGATCAAAGCGATGGAGGGGAGGGCAGCGGGTGGGTGCAATTAAGATTACTCATCAGGCACTGGAGTGTGCAAATAACCAGCTGAGGTTAATTGCAGAGTGGCCTTCGCACGCACTATAA MSQDDVRASHPARASKGRPGSNGSKRWRGGQRVGAIKITHQALECANNQLRLIAEWPSHAL Homology
BLAST of IVF0002548 vs. ExPASy TrEMBL
Match: A0A5D3DS68 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14G00180 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 2.4e-13 Identity = 42/61 (68.85%), Postives = 49/61 (80.33%), Query Frame = 0
BLAST of IVF0002548 vs. ExPASy TrEMBL
Match: A0A5A7U4I8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G001180 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 6.6e-11 Identity = 37/61 (60.66%), Postives = 46/61 (75.41%), Query Frame = 0
BLAST of IVF0002548 vs. ExPASy TrEMBL
Match: A0A5D3BD15 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001730 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 1.5e-10 Identity = 34/61 (55.74%), Postives = 48/61 (78.69%), Query Frame = 0
BLAST of IVF0002548 vs. ExPASy TrEMBL
Match: A0A5A7SNB3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G005110 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 1.5e-10 Identity = 39/61 (63.93%), Postives = 48/61 (78.69%), Query Frame = 0
BLAST of IVF0002548 vs. ExPASy TrEMBL
Match: A0A5A7TGP1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold246G00540 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 1.5e-10 Identity = 38/61 (62.30%), Postives = 46/61 (75.41%), Query Frame = 0
BLAST of IVF0002548 vs. NCBI nr
Match: KAA0067019.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK26255.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 83.6 bits (205), Expect = 8.81e-18 Identity = 42/61 (68.85%), Postives = 49/61 (80.33%), Query Frame = 0
BLAST of IVF0002548 vs. NCBI nr
Match: KAA0052252.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK01817.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 73.6 bits (179), Expect = 4.53e-15 Identity = 37/61 (60.66%), Postives = 45/61 (73.77%), Query Frame = 0
BLAST of IVF0002548 vs. NCBI nr
Match: KAA0050190.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYJ98219.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 75.5 bits (184), Expect = 9.42e-15 Identity = 37/61 (60.66%), Postives = 46/61 (75.41%), Query Frame = 0
BLAST of IVF0002548 vs. NCBI nr
Match: KAA0031723.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 74.3 bits (181), Expect = 1.78e-14 Identity = 39/61 (63.93%), Postives = 48/61 (78.69%), Query Frame = 0
BLAST of IVF0002548 vs. NCBI nr
Match: KAA0065782.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYJ96521.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 74.3 bits (181), Expect = 3.75e-14 Identity = 34/61 (55.74%), Postives = 48/61 (78.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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