IVF0002547 (gene) Melon (IVF77) v1

Overview
NameIVF0002547
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionProtein MNN4-like
Locationchr04: 12380080 .. 12380466 (+)
RNA-Seq ExpressionIVF0002547
SyntenyIVF0002547
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGATAAAGATGAAGAAGAGAAAGAGGAAGATTATGTCCCACTAAAACGCAAAAGAAAAGGTGAGGAGGACACCTCTAAATTAAAGAGAGTAAAATCTGTTAAGGCCAGGGACTTTGAGGAAACTTTGTCGCCTGCGTCCACAAAGAGTCCCAAGAAAAATAAGCCTACCGATCTTCCCTCGCCCAATAAATCCAAATCCTTCAAAGCCACTAGCTCTCAAACTCCCACTAAATGCACAATGCCTCCACCACCTTTCGAAAAATCCAAATCGCTAATCCTATCCCAAGAAATCCAAAATACCTCTTCCTCACCTAGGCAAGAAACTAATAAAAATCTTGCTATTGTTGTACATACCAAGGAAGGAACCTCCACTCTACAATAA

mRNA sequence

ATGGATGATAAAGATGAAGAAGAGAAAGAGGAAGATTATGTCCCACTAAAACGCAAAAGAAAAGGTGAGGAGGACACCTCTAAATTAAAGAGAGTAAAATCTGTTAAGGCCAGGGACTTTGAGGAAACTTTGTCGCCTGCGTCCACAAAGAGTCCCAAGAAAAATAAGCCTACCGATCTTCCCTCGCCCAATAAATCCAAATCCTTCAAAGCCACTAGCTCTCAAACTCCCACTAAATGCACAATGCCTCCACCACCTTTCGAAAAATCCAAATCGCTAATCCTATCCCAAGAAATCCAAAATACCTCTTCCTCACCTAGGCAAGAAACTAATAAAAATCTTGCTATTGTTGTACATACCAAGGAAGGAACCTCCACTCTACAATAA

Coding sequence (CDS)

ATGGATGATAAAGATGAAGAAGAGAAAGAGGAAGATTATGTCCCACTAAAACGCAAAAGAAAAGGTGAGGAGGACACCTCTAAATTAAAGAGAGTAAAATCTGTTAAGGCCAGGGACTTTGAGGAAACTTTGTCGCCTGCGTCCACAAAGAGTCCCAAGAAAAATAAGCCTACCGATCTTCCCTCGCCCAATAAATCCAAATCCTTCAAAGCCACTAGCTCTCAAACTCCCACTAAATGCACAATGCCTCCACCACCTTTCGAAAAATCCAAATCGCTAATCCTATCCCAAGAAATCCAAAATACCTCTTCCTCACCTAGGCAAGAAACTAATAAAAATCTTGCTATTGTTGTACATACCAAGGAAGGAACCTCCACTCTACAATAA

Protein sequence

MDDKDEEEKEEDYVPLKRKRKGEEDTSKLKRVKSVKARDFEETLSPASTKSPKKNKPTDLPSPNKSKSFKATSSQTPTKCTMPPPPFEKSKSLILSQEIQNTSSSPRQETNKNLAIVVHTKEGTSTLQ
Homology
BLAST of IVF0002547 vs. ExPASy TrEMBL
Match: A0A5D3D644 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold154G00560 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 8.9e-58
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0

Query: 1   MDDKDEEEKEEDYVPLKRKRKGEEDTSKLKRVKSVKARDFEETLSPASTKSPKKNKPTDL 60
           MDDKDEEEKEEDYVPLKRKRKGEEDTSKLKRVKSVKARDFEETLSPASTKSPKKNKPTDL
Sbjct: 156 MDDKDEEEKEEDYVPLKRKRKGEEDTSKLKRVKSVKARDFEETLSPASTKSPKKNKPTDL 215

Query: 61  PSPNKSKSFKATSSQTPTKCTMPPPPFEKSKSLILSQEIQNTSSSPRQETNKNLAIVVHT 120
           PSPNKSKSFKATSSQTPTKCTMPPPPFEKSKSLILSQEIQNTSSSPRQETNKNLAIVVHT
Sbjct: 216 PSPNKSKSFKATSSQTPTKCTMPPPPFEKSKSLILSQEIQNTSSSPRQETNKNLAIVVHT 275

Query: 121 KEGTSTLQ 129
           KEGTSTLQ
Sbjct: 276 KEGTSTLQ 283

BLAST of IVF0002547 vs. ExPASy TrEMBL
Match: A0A5A7V1I3 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G005890 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.9e-28
Identity = 85/129 (65.89%), Postives = 101/129 (78.29%), Query Frame = 0

Query: 1   MDDKDEEEKEEDYVPLKRKRKGEEDTSKLKRVKSVKARDFEETLSPASTKSPK-KNKPTD 60
           +D +D+EEK+E+ +PLK KR+ EE+ S+ K++K+  ARD +ETLSPASTKSPK K K TD
Sbjct: 255 VDGEDKEEKKENDIPLKCKRQREEEASRSKKLKTSTARDSKETLSPASTKSPKNKKKSTD 314

Query: 61  LPSPNKSKSFKATSSQTPTKCTMPPPPFEKSKSLILSQEIQNTSSSPRQETNKNLAIVVH 120
           LPSPNKSKS KATSSQTP K   PPPP +K KS  LSQ+IQNTS S +QETNKNL IV  
Sbjct: 315 LPSPNKSKSSKATSSQTPIKFKTPPPPLKKFKSPTLSQKIQNTSFSSKQETNKNLTIVTR 374

Query: 121 TKEGTSTLQ 129
           TKE TST Q
Sbjct: 375 TKEETSTPQ 383

BLAST of IVF0002547 vs. ExPASy TrEMBL
Match: A0A5D3BF32 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00380 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 1.0e-24
Identity = 76/111 (68.47%), Postives = 87/111 (78.38%), Query Frame = 0

Query: 16  LKRKRKGEEDTSKLKRVKSVKARDFEETLSPASTKSPKKNKPTDLPSPNKSKSFKATSSQ 75
           LK K+  EE+ S+ K++K+ KA+D +ETLS ASTK PKK KPT+LPSPNKSKS KATSSQ
Sbjct: 149 LKTKQDDEEEASESKKIKTCKAKDSKETLSFASTKIPKKKKPTNLPSPNKSKSSKATSSQ 208

Query: 76  TPTKCTMPPPPFEKSKSLILSQEIQNTSSSPRQETNKNLAIVVHTKEGTST 127
           TPTK   PPPP EKSKS IL QEIQNTSS      NKNLAI+VHTK+ TST
Sbjct: 209 TPTKSKTPPPPPEKSKSPILFQEIQNTSS-----PNKNLAIIVHTKKRTST 254

BLAST of IVF0002547 vs. ExPASy TrEMBL
Match: A0A5D3BYP6 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G001500 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 3.1e-18
Identity = 63/97 (64.95%), Postives = 77/97 (79.38%), Query Frame = 0

Query: 1   MDDKDEEEKEEDYVPLKRKRKGEEDTSKLKRVKSVKARDFEETLSPASTKSPK-KNKPTD 60
           +D +D+EEK+E+ +PLKRKR+GEE+ S+ K++K+  ARD +ETLSPASTKSPK K K TD
Sbjct: 134 VDGEDKEEKKENDIPLKRKRQGEEEASRSKKLKTSTARDSKETLSPASTKSPKNKKKSTD 193

Query: 61  LPSPNKSKSFKATSSQTPTKCTMPPPPFEKSKSLILS 97
           LPSPNKSKS KAT SQTP K   PPPP +K KS  LS
Sbjct: 194 LPSPNKSKSSKATGSQTPIKFKTPPPPLKKFKSPTLS 230

BLAST of IVF0002547 vs. ExPASy TrEMBL
Match: A0A5A7U397 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00290 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 5.3e-18
Identity = 69/125 (55.20%), Postives = 85/125 (68.00%), Query Frame = 0

Query: 4   KDEEEKEEDYVPLKRKRKGEEDTSKLKRVKSVKARDFEETLSPASTKSPKKNKPTDLPSP 63
           K+  +++E+ VPL  KR  EE  S LKR KS KA+D E+T  P S K   K KPT+  SP
Sbjct: 9   KEAAKEKEEEVPLHHKRHNEEKASGLKREKSSKAKDSEDTFPPTSLKGSMKKKPTECLSP 68

Query: 64  NKSKSFKATSSQTPTKCTMPPPPFEKSKSLILSQEIQNTSSSPRQETNKNLAIVVHTKEG 123
           +KSKSFKAT SQTPTK    PPP +KSKS   SQ+IQNT  S  +E N++LA+VV  KEG
Sbjct: 69  HKSKSFKATRSQTPTKSKTLPPP-QKSKSPTSSQQIQNTFPSYGKELNEHLALVVQNKEG 128

Query: 124 TSTLQ 129
           T TL+
Sbjct: 129 TLTLR 132

BLAST of IVF0002547 vs. NCBI nr
Match: KAA0037951.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK19029.1 protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 233 bits (593), Expect = 1.94e-74
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0

Query: 1   MDDKDEEEKEEDYVPLKRKRKGEEDTSKLKRVKSVKARDFEETLSPASTKSPKKNKPTDL 60
           MDDKDEEEKEEDYVPLKRKRKGEEDTSKLKRVKSVKARDFEETLSPASTKSPKKNKPTDL
Sbjct: 156 MDDKDEEEKEEDYVPLKRKRKGEEDTSKLKRVKSVKARDFEETLSPASTKSPKKNKPTDL 215

Query: 61  PSPNKSKSFKATSSQTPTKCTMPPPPFEKSKSLILSQEIQNTSSSPRQETNKNLAIVVHT 120
           PSPNKSKSFKATSSQTPTKCTMPPPPFEKSKSLILSQEIQNTSSSPRQETNKNLAIVVHT
Sbjct: 216 PSPNKSKSFKATSSQTPTKCTMPPPPFEKSKSLILSQEIQNTSSSPRQETNKNLAIVVHT 275

Query: 121 KEGTSTLQ 128
           KEGTSTLQ
Sbjct: 276 KEGTSTLQ 283

BLAST of IVF0002547 vs. NCBI nr
Match: KAA0060687.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 135 bits (340), Expect = 6.43e-35
Identity = 85/129 (65.89%), Postives = 101/129 (78.29%), Query Frame = 0

Query: 1   MDDKDEEEKEEDYVPLKRKRKGEEDTSKLKRVKSVKARDFEETLSPASTKSPK-KNKPTD 60
           +D +D+EEK+E+ +PLK KR+ EE+ S+ K++K+  ARD +ETLSPASTKSPK K K TD
Sbjct: 255 VDGEDKEEKKENDIPLKCKRQREEEASRSKKLKTSTARDSKETLSPASTKSPKNKKKSTD 314

Query: 61  LPSPNKSKSFKATSSQTPTKCTMPPPPFEKSKSLILSQEIQNTSSSPRQETNKNLAIVVH 120
           LPSPNKSKS KATSSQTP K   PPPP +K KS  LSQ+IQNTS S +QETNKNL IV  
Sbjct: 315 LPSPNKSKSSKATSSQTPIKFKTPPPPLKKFKSPTLSQKIQNTSFSSKQETNKNLTIVTR 374

Query: 121 TKEGTSTLQ 128
           TKE TST Q
Sbjct: 375 TKEETSTPQ 383

BLAST of IVF0002547 vs. NCBI nr
Match: TYJ97737.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 122 bits (307), Expect = 1.34e-31
Identity = 76/111 (68.47%), Postives = 87/111 (78.38%), Query Frame = 0

Query: 16  LKRKRKGEEDTSKLKRVKSVKARDFEETLSPASTKSPKKNKPTDLPSPNKSKSFKATSSQ 75
           LK K+  EE+ S+ K++K+ KA+D +ETLS ASTK PKK KPT+LPSPNKSKS KATSSQ
Sbjct: 149 LKTKQDDEEEASESKKIKTCKAKDSKETLSFASTKIPKKKKPTNLPSPNKSKSSKATSSQ 208

Query: 76  TPTKCTMPPPPFEKSKSLILSQEIQNTSSSPRQETNKNLAIVVHTKEGTST 126
           TPTK   PPPP EKSKS IL QEIQNTSS      NKNLAI+VHTK+ TST
Sbjct: 209 TPTKSKTPPPPPEKSKSPILFQEIQNTSSP-----NKNLAIIVHTKKRTST 254

BLAST of IVF0002547 vs. NCBI nr
Match: KAA0048706.1 (hypothetical protein E6C27_scaffold4358G00290 [Cucumis melo var. makuwa])

HSP 1 Score: 102 bits (253), Expect = 1.11e-23
Identity = 68/118 (57.63%), Postives = 80/118 (67.80%), Query Frame = 0

Query: 11  EDYVPLKRKRKGEEDTSKLKRVKSVKARDFEETLSPASTKSPKKNKPTDLPSPNKSKSFK 70
           E+ VPL  KR  EE  S LKR KS KA+D E+T  P S K   K KPT+  SP+KSKSFK
Sbjct: 16  EEEVPLHHKRHNEEKASGLKREKSSKAKDSEDTFPPTSLKGSMKKKPTECLSPHKSKSFK 75

Query: 71  ATSSQTPTKCTMPPPPFEKSKSLILSQEIQNTSSSPRQETNKNLAIVVHTKEGTSTLQ 128
           AT SQTPTK    PPP +KSKS   SQ+IQNT  S  +E N++LA+VV  KEGT TL+
Sbjct: 76  ATRSQTPTKSKTLPPP-QKSKSPTSSQQIQNTFPSYGKELNEHLALVVQNKEGTLTLR 132

BLAST of IVF0002547 vs. NCBI nr
Match: TYK03306.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 101 bits (252), Expect = 1.23e-23
Identity = 63/97 (64.95%), Postives = 77/97 (79.38%), Query Frame = 0

Query: 1   MDDKDEEEKEEDYVPLKRKRKGEEDTSKLKRVKSVKARDFEETLSPASTKSPK-KNKPTD 60
           +D +D+EEK+E+ +PLKRKR+GEE+ S+ K++K+  ARD +ETLSPASTKSPK K K TD
Sbjct: 134 VDGEDKEEKKENDIPLKRKRQGEEEASRSKKLKTSTARDSKETLSPASTKSPKNKKKSTD 193

Query: 61  LPSPNKSKSFKATSSQTPTKCTMPPPPFEKSKSLILS 96
           LPSPNKSKS KAT SQTP K   PPPP +K KS  LS
Sbjct: 194 LPSPNKSKSSKATGSQTPIKFKTPPPPLKKFKSPTLS 230

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3D6448.9e-58100.00Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold154G00... [more]
A0A5A7V1I31.9e-2865.89Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G005... [more]
A0A5D3BF321.0e-2468.47Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G0... [more]
A0A5D3BYP63.1e-1864.95Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00... [more]
A0A5A7U3975.3e-1855.20Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0037951.11.94e-74100.00protein MNN4-like [Cucumis melo var. makuwa] >TYK19029.1 protein MNN4-like [Cucu... [more]
KAA0060687.16.43e-3565.89protein MNN4-like [Cucumis melo var. makuwa][more]
TYJ97737.11.34e-3168.47protein MNN4-like [Cucumis melo var. makuwa][more]
KAA0048706.11.11e-2357.63hypothetical protein E6C27_scaffold4358G00290 [Cucumis melo var. makuwa][more]
TYK03306.11.23e-2364.95protein MNN4-like [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 93..128
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..128
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..40

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0002547.2IVF0002547.2mRNA