IVF0002489 (gene) Melon (IVF77) v1

Overview
NameIVF0002489
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionDNA-dependent metalloprotease WSS1-like
Locationchr08: 17734196 .. 17735560 (-)
RNA-Seq ExpressionIVF0002489
SyntenyIVF0002489
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCTCAATGATCTCAACAAGGTTTGGCAAGTTAATCCTTTAAAGAAGATAGGGGAAGATGATTCTCGGAAAGTGCTTGAAAAAATAGCTAAACAGGTGCAACCCATCATGCGCAAACGCAGATGGAAAGTGGAAACTCTTTCTGAGTTCTAGTAATGGCTTTTTTCTCTTTTACTTGACAAGTAATTGAGTTTTTGGTTTATTGTCTTGTATAATCTTGAATTTGAATCGCAGTCCTGACAATCCGGGTCTCATGGGGTGAACATAGGGGGAGGTCAAGAGATTAAACTTAGAATTCGGAGGCCAAATAATGAGTGGGATTTCTTCCCTTATGAGCAGATTCTTGACACAATGCTTCATGAGCTTTGCCATATTGTTCATGGTCCTCACAATGCTGATTTCTACAGCCTTTTAGATGAACTCAGAAAGGTGATTCGTTCTTTCTCTATTGTTTGTCAAAACCGTTCCTTGTTTTGGTCGGTTGCCCAAATGGTATGAATTACTTCAAATACCTTCAGTTACTATTCCATGTTTAGCATTCCATTCAAGATATCACGGAAGGACTTTTCACATATGAACTGTTTGTCAGAAGCTACTCTGACTTCTGAATTTGAGATTGACTTTTGGAAGAGTGAAAAGTGGTTTTCTTCATTAACAACACGTCTCAAATTTATACTGTAATACAAGAATGTTTATGAAAATTCTAAAAGCAGTTGAAAGTAGTTATGTGATTTTGGAACAAGCACTTAATTAGTGTTTTTCTTTTTCCCAAAAGTTCTCATGGAAAAAGCATTTTCACCCAAAGTTCTTTTCCAAGTCATTCCAAATTTAACCTAGAGAAAAAGTCATCTTATATAAATTATTTAAGAAAAAACACGTGGAAAATAACATTTTTTTTTTTGGAGAGGGCCCACAGATCCTAATCATCCATTAGTGTTATAGTTGGAATGTGCTTGACATTTAGGAAAACTTTTCAATTTGCCACCTGAGCCATGGCTGTAAAATGCATATTAGAGACGCTGTATTTTGACAATGGTAAACTAAGATAAGCTTTAAGAATTAAATCAAGTATGGGGCATTATTTGGACATTTGGATTGCTTCTTCAATTTTCTCTGCCTTTCGCCACTTGGATATATACTGATCACCTTCCATTCTTTCTTTTTCTTCAGGAATGTGAAGAACTCATGTCCAAAGGTATCACAGGCACCGGGCAGGGATTTGATCTTCGTGGGAGGCGTTTGGGTGGAATCTCTCACCAACCACCTTTATCATCCCTCCGGCAAACTGCCTTAGCTGCTGCTGAAAATCGAGCTCGAGGTGGTCCATCAGGACCTAAGCGCCTAGGTGGTGCAGCAACATGA

mRNA sequence

ATGGATCTCAATGATCTCAACAAGGTTTGGCAAGTTAATCCTTTAAAGAAGATAGGGGAAGATGATTCTCGGAAAGTGCTTGAAAAAATAGCTAAACAGGTGCAACCCATCATGCGCAAACGCAGATGGAAAGTGGAAACTCTTTCTGAAATTCGGAGGCCAAATAATGAGTGGGATTTCTTCCCTTATGAGCAGATTCTTGACACAATGCTTCATGAGCTTTGCCATATTGTTCATGGTCCTCACAATGCTGATTTCTACAGCCTTTTAGATGAACTCAGAAAGGAATGTGAAGAACTCATGTCCAAAGGTATCACAGGCACCGGGCAGGGATTTGATCTTCGTGGGAGGCGTTTGGGTGGAATCTCTCACCAACCACCTTTATCATCCCTCCGGCAAACTGCCTTAGCTGCTGCTGAAAATCGAGCTCGAGGTGGTCCATCAGGACCTAAGCGCCTAGGTGGTGCAGCAACATGA

Coding sequence (CDS)

ATGGATCTCAATGATCTCAACAAGGTTTGGCAAGTTAATCCTTTAAAGAAGATAGGGGAAGATGATTCTCGGAAAGTGCTTGAAAAAATAGCTAAACAGGTGCAACCCATCATGCGCAAACGCAGATGGAAAGTGGAAACTCTTTCTGAAATTCGGAGGCCAAATAATGAGTGGGATTTCTTCCCTTATGAGCAGATTCTTGACACAATGCTTCATGAGCTTTGCCATATTGTTCATGGTCCTCACAATGCTGATTTCTACAGCCTTTTAGATGAACTCAGAAAGGAATGTGAAGAACTCATGTCCAAAGGTATCACAGGCACCGGGCAGGGATTTGATCTTCGTGGGAGGCGTTTGGGTGGAATCTCTCACCAACCACCTTTATCATCCCTCCGGCAAACTGCCTTAGCTGCTGCTGAAAATCGAGCTCGAGGTGGTCCATCAGGACCTAAGCGCCTAGGTGGTGCAGCAACATGA

Protein sequence

MDLNDLNKVWQVNPLKKIGEDDSRKVLEKIAKQVQPIMRKRRWKVETLSEIRRPNNEWDFFPYEQILDTMLHELCHIVHGPHNADFYSLLDELRKECEELMSKGITGTGQGFDLRGRRLGGISHQPPLSSLRQTALAAAENRARGGPSGPKRLGGAAT
Homology
[Close]
BLAST of IVF0002489 vs. ExPASy Swiss-Prot
Match: Q9P7B5 (DNA-dependent metalloprotease WSS1 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC521.02 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 9.1e-09
Identity = 39/124 (31.45%), Postives = 58/124 (46.77%), Query Frame = 0 

Query: 8   KVWQVNPLKKIGEDDSRKVLEKIAKQVQPIMRKRRWKVETLSEI---------------- 67
           K+  ++ +K    D S   L++IA    PIM++  + V +L E+                
Sbjct: 34  KIGFISAIKGDFHDLSSDYLKRIAAMAFPIMKEHGFGVTSLDEVAYNAKFWGRNWNKGEC 93

Query: 68  -----RRPNNEWDFFPYEQILDTMLHELCHIVHGPHNADFYSLLDELRKECEELMSKGIT 111
                R  +N W   P+E ++D  LHELCHI  GPH+  F+S L  LR     L +KG  
Sbjct: 94  IELVLRDASNRW--LPFEFVMDVFLHELCHIWQGPHDRRFFSHLSTLRAALIALYAKGYK 153

[Close]
BLAST of IVF0002489 vs. ExPASy Swiss-Prot
Match: P38838 (DNA-dependent metalloprotease WSS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=WSS1 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.0e-08
Identity = 40/127 (31.50%), Postives = 63/127 (49.61%), Query Frame = 0 

Query: 17  KIGEDDSRKVLEKIAKQVQPIMRKRRWKVETLSE----------------------IRRP 76
           K  ++D+  ++++IA +V  +M++  +KV  L E                      +R  
Sbjct: 38  KPNKEDALNLIKEIAHKVSYLMKENHFKVTNLVEFYPRDQRLLGMNVNHGSKIMLRLRCS 97

Query: 77  NNEWDFFPYEQILDTMLHELCHIVHGPHNADFYSLLDELRKECEELMSKGITGTGQGFDL 122
            +E+ F P E I+ TMLHEL H + GPH+  FY+ LDEL      +  +G+  T  G   
Sbjct: 98  TDEFQFLPMECIMGTMLHELTHNLFGPHDKKFYNKLDELIGRQWVIEQRGLYDTFLG--- 157

[Close]
BLAST of IVF0002489 vs. ExPASy TrEMBL
Match: A0A5A7V0N8 (DNA-dependent metalloprotease WSS1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold160G00060 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 2.4e-81
Identity = 158/180 (87.78%), Postives = 158/180 (87.78%), Query Frame = 0 

Query: 1   MDLNDLNKVWQVNPLKKIGEDDSRKVLEKIAKQVQPIMRKRRWKVETLSE---------- 60
           MDLNDLNKVWQVNPLKKIGEDDSRKVLEKIAKQVQPIMRKRRWKVETLSE          
Sbjct: 1   MDLNDLNKVWQVNPLKKIGEDDSRKVLEKIAKQVQPIMRKRRWKVETLSEFYPDNPGLMG 60

Query: 61  ------------IRRPNNEWDFFPYEQILDTMLHELCHIVHGPHNADFYSLLDELRKECE 120
                       IRRPNNEWDFFPYEQILDTMLHELCHIVHGPHNADFYSLLDELRKECE
Sbjct: 61  VNIGGGQEIKLRIRRPNNEWDFFPYEQILDTMLHELCHIVHGPHNADFYSLLDELRKECE 120

Query: 121 ELMSKGITGTGQGFDLRGRRLGGISHQPPLSSLRQTALAAAENRARGGPSGPKRLGGAAT 159
           ELMSKGITGTGQGFDLRGRRLGGISHQPPLSSLRQTALAAAENRARGGPSGPKRLGGAAT
Sbjct: 121 ELMSKGITGTGQGFDLRGRRLGGISHQPPLSSLRQTALAAAENRARGGPSGPKRLGGAAT 180

[Close]
BLAST of IVF0002489 vs. ExPASy TrEMBL
Match: A0A1S4DV14 (LOW QUALITY PROTEIN: DNA-dependent metalloprotease WSS1-like OS=Cucumis melo OX=3656 GN=LOC103486153 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 6.0e-80
Identity = 155/177 (87.57%), Postives = 155/177 (87.57%), Query Frame = 0 

Query: 1   MDLNDLNKVWQVNPLKKIGEDDSRKVLEKIAKQVQPIMRKRRWKVETLSE---------- 60
           MDLNDLNKVWQVNPLKKIGEDDSRKVLEKIAKQVQPIMRKRRWKVETLSE          
Sbjct: 1   MDLNDLNKVWQVNPLKKIGEDDSRKVLEKIAKQVQPIMRKRRWKVETLSEFYPDNPGLMG 60

Query: 61  ------------IRRPNNEWDFFPYEQILDTMLHELCHIVHGPHNADFYSLLDELRKECE 120
                       IRRPNNEWDFFPYEQILDTMLHELCHIVHGPHNADFYSLLDELRKECE
Sbjct: 61  VNIGGGQEIKLRIRRPNNEWDFFPYEQILDTMLHELCHIVHGPHNADFYSLLDELRKECE 120

Query: 121 ELMSKGITGTGQGFDLRGRRLGGISHQPPLSSLRQTALAAAENRARGGPSGPKRLGG 156
           ELMSKGITGTGQGFDLRGRRLGGISHQPPLSSLRQTALAAAENRARGGPSGPKRLGG
Sbjct: 121 ELMSKGITGTGQGFDLRGRRLGGISHQPPLSSLRQTALAAAENRARGGPSGPKRLGG 177

[Close]
BLAST of IVF0002489 vs. ExPASy TrEMBL
Match: A0A6J1DF71 (DNA-dependent metalloprotease WSS1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019534 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.3e-74
Identity = 145/177 (81.92%), Postives = 149/177 (84.18%), Query Frame = 0 

Query: 1   MDLNDLNKVWQVNPLKKIGEDDSRKVLEKIAKQVQPIMRKRRWKVETLSE---------- 60
           MDLNDLNKVW++ PLKKIGEDD+RKVLEKIAKQVQPIMRKR+WKVETLSE          
Sbjct: 1   MDLNDLNKVWEIKPLKKIGEDDARKVLEKIAKQVQPIMRKRKWKVETLSEFYPANPGLMG 60

Query: 61  ------------IRRPNNEWDFFPYEQILDTMLHELCHIVHGPHNADFYSLLDELRKECE 120
                       IRRPNNEWDFFPYEQILDTMLHELCHIVHGPHNADFYSLLDELRKECE
Sbjct: 61  VNIGGGQEIKLRIRRPNNEWDFFPYEQILDTMLHELCHIVHGPHNADFYSLLDELRKECE 120

Query: 121 ELMSKGITGTGQGFDLRGRRLGGISHQPPLSSLRQTALAAAENRARGGPSGPKRLGG 156
           ELM KGIT TGQGFDL GRRLGGIS QPPLSSLRQT LAAAENRARGGPSGPKRLGG
Sbjct: 121 ELMCKGITRTGQGFDLHGRRLGGISQQPPLSSLRQTTLAAAENRARGGPSGPKRLGG 177

[Close]
BLAST of IVF0002489 vs. ExPASy TrEMBL
Match: A0A6J1EKF1 (DNA-dependent metalloprotease WSS1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435471 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 8.4e-74
Identity = 143/177 (80.79%), Postives = 149/177 (84.18%), Query Frame = 0 

Query: 1   MDLNDLNKVWQVNPLKKIGEDDSRKVLEKIAKQVQPIMRKRRWKVETLSE---------- 60
           MDLNDLNKVW++ PLKKIGEDD+RKVLEKIAKQVQPIMRKRRWKVETLSE          
Sbjct: 1   MDLNDLNKVWEIKPLKKIGEDDARKVLEKIAKQVQPIMRKRRWKVETLSEFYPDNPGLMG 60

Query: 61  ------------IRRPNNEWDFFPYEQILDTMLHELCHIVHGPHNADFYSLLDELRKECE 120
                       IRRPN+EWDFFPYEQILDTMLHELCHIVHGPHNADFY+LLDELRKECE
Sbjct: 61  VNIGGGQEIKLRIRRPNSEWDFFPYEQILDTMLHELCHIVHGPHNADFYNLLDELRKECE 120

Query: 121 ELMSKGITGTGQGFDLRGRRLGGISHQPPLSSLRQTALAAAENRARGGPSGPKRLGG 156
           ELM KGITGTGQGFD+RGRRLGGISHQ PLSSLRQT L AAENRARG PSGPKRLGG
Sbjct: 121 ELMCKGITGTGQGFDVRGRRLGGISHQLPLSSLRQTTLTAAENRARGAPSGPKRLGG 177

[Close]
BLAST of IVF0002489 vs. ExPASy TrEMBL
Match: A0A6J1HRV8 (DNA-dependent metalloprotease WSS1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467224 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 8.4e-74
Identity = 143/177 (80.79%), Postives = 149/177 (84.18%), Query Frame = 0 

Query: 1   MDLNDLNKVWQVNPLKKIGEDDSRKVLEKIAKQVQPIMRKRRWKVETLSE---------- 60
           MDLNDLNKVW++ PLKKIGEDD+RKVLEKIAKQVQPIMRKRRWKVETLSE          
Sbjct: 1   MDLNDLNKVWEIKPLKKIGEDDARKVLEKIAKQVQPIMRKRRWKVETLSEFYPDNPGLMG 60

Query: 61  ------------IRRPNNEWDFFPYEQILDTMLHELCHIVHGPHNADFYSLLDELRKECE 120
                       IRRPN+EWDFFPYEQILDTMLHELCHIVHGPHNADFY+LLDELRKECE
Sbjct: 61  VNIGGGQEIKLRIRRPNSEWDFFPYEQILDTMLHELCHIVHGPHNADFYNLLDELRKECE 120

Query: 121 ELMSKGITGTGQGFDLRGRRLGGISHQPPLSSLRQTALAAAENRARGGPSGPKRLGG 156
           ELM KGITGTGQGFD+RGRRLGGISHQ PLSSLRQT L AAENRARG PSGPKRLGG
Sbjct: 121 ELMCKGITGTGQGFDVRGRRLGGISHQLPLSSLRQTTLTAAENRARGAPSGPKRLGG 177

[Close]
BLAST of IVF0002489 vs. NCBI nr
Match: KAA0060046.1 (DNA-dependent metalloprotease WSS1-like [Cucumis melo var. makuwa])

HSP 1 Score: 307 bits (786), Expect = 9.10e-105
Identity = 158/180 (87.78%), Postives = 158/180 (87.78%), Query Frame = 0 

Query: 1   MDLNDLNKVWQVNPLKKIGEDDSRKVLEKIAKQVQPIMRKRRWKVETLSE---------- 60
           MDLNDLNKVWQVNPLKKIGEDDSRKVLEKIAKQVQPIMRKRRWKVETLSE          
Sbjct: 1   MDLNDLNKVWQVNPLKKIGEDDSRKVLEKIAKQVQPIMRKRRWKVETLSEFYPDNPGLMG 60

Query: 61  ------------IRRPNNEWDFFPYEQILDTMLHELCHIVHGPHNADFYSLLDELRKECE 120
                       IRRPNNEWDFFPYEQILDTMLHELCHIVHGPHNADFYSLLDELRKECE
Sbjct: 61  VNIGGGQEIKLRIRRPNNEWDFFPYEQILDTMLHELCHIVHGPHNADFYSLLDELRKECE 120

Query: 121 ELMSKGITGTGQGFDLRGRRLGGISHQPPLSSLRQTALAAAENRARGGPSGPKRLGGAAT 158
           ELMSKGITGTGQGFDLRGRRLGGISHQPPLSSLRQTALAAAENRARGGPSGPKRLGGAAT
Sbjct: 121 ELMSKGITGTGQGFDLRGRRLGGISHQPPLSSLRQTALAAAENRARGGPSGPKRLGGAAT 180

[Close]
BLAST of IVF0002489 vs. NCBI nr
Match: XP_016899550.1 (PREDICTED: LOW QUALITY PROTEIN: DNA-dependent metalloprotease WSS1-like [Cucumis melo])

HSP 1 Score: 303 bits (775), Expect = 6.73e-101
Identity = 155/177 (87.57%), Postives = 155/177 (87.57%), Query Frame = 0 

Query: 1   MDLNDLNKVWQVNPLKKIGEDDSRKVLEKIAKQVQPIMRKRRWKVETLSE---------- 60
           MDLNDLNKVWQVNPLKKIGEDDSRKVLEKIAKQVQPIMRKRRWKVETLSE          
Sbjct: 1   MDLNDLNKVWQVNPLKKIGEDDSRKVLEKIAKQVQPIMRKRRWKVETLSEFYPDNPGLMG 60

Query: 61  ------------IRRPNNEWDFFPYEQILDTMLHELCHIVHGPHNADFYSLLDELRKECE 120
                       IRRPNNEWDFFPYEQILDTMLHELCHIVHGPHNADFYSLLDELRKECE
Sbjct: 61  VNIGGGQEIKLRIRRPNNEWDFFPYEQILDTMLHELCHIVHGPHNADFYSLLDELRKECE 120

Query: 121 ELMSKGITGTGQGFDLRGRRLGGISHQPPLSSLRQTALAAAENRARGGPSGPKRLGG 155
           ELMSKGITGTGQGFDLRGRRLGGISHQPPLSSLRQTALAAAENRARGGPSGPKRLGG
Sbjct: 121 ELMSKGITGTGQGFDLRGRRLGGISHQPPLSSLRQTALAAAENRARGGPSGPKRLGG 177

[Close]
BLAST of IVF0002489 vs. NCBI nr
Match: XP_022151616.1 (DNA-dependent metalloprotease WSS1-like isoform X1 [Momordica charantia] >XP_022151618.1 DNA-dependent metalloprotease WSS1-like isoform X1 [Momordica charantia])

HSP 1 Score: 285 bits (729), Expect = 6.92e-94
Identity = 145/177 (81.92%), Postives = 149/177 (84.18%), Query Frame = 0 

Query: 1   MDLNDLNKVWQVNPLKKIGEDDSRKVLEKIAKQVQPIMRKRRWKVETLSE---------- 60
           MDLNDLNKVW++ PLKKIGEDD+RKVLEKIAKQVQPIMRKR+WKVETLSE          
Sbjct: 1   MDLNDLNKVWEIKPLKKIGEDDARKVLEKIAKQVQPIMRKRKWKVETLSEFYPANPGLMG 60

Query: 61  ------------IRRPNNEWDFFPYEQILDTMLHELCHIVHGPHNADFYSLLDELRKECE 120
                       IRRPNNEWDFFPYEQILDTMLHELCHIVHGPHNADFYSLLDELRKECE
Sbjct: 61  VNIGGGQEIKLRIRRPNNEWDFFPYEQILDTMLHELCHIVHGPHNADFYSLLDELRKECE 120

Query: 121 ELMSKGITGTGQGFDLRGRRLGGISHQPPLSSLRQTALAAAENRARGGPSGPKRLGG 155
           ELM KGIT TGQGFDL GRRLGGIS QPPLSSLRQT LAAAENRARGGPSGPKRLGG
Sbjct: 121 ELMCKGITRTGQGFDLHGRRLGGISQQPPLSSLRQTTLAAAENRARGGPSGPKRLGG 177

[Close]
BLAST of IVF0002489 vs. NCBI nr
Match: XP_023543567.1 (DNA-dependent metalloprotease WSS1-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023543568.1 DNA-dependent metalloprotease WSS1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 282 bits (722), Expect = 7.49e-93
Identity = 143/177 (80.79%), Postives = 149/177 (84.18%), Query Frame = 0 

Query: 1   MDLNDLNKVWQVNPLKKIGEDDSRKVLEKIAKQVQPIMRKRRWKVETLSE---------- 60
           MDLNDLNKVW++ PLKKIGEDD+RKVLEKIAKQVQPIMRKRRWKVETLSE          
Sbjct: 1   MDLNDLNKVWEIKPLKKIGEDDARKVLEKIAKQVQPIMRKRRWKVETLSEFYPDNPGLMG 60

Query: 61  ------------IRRPNNEWDFFPYEQILDTMLHELCHIVHGPHNADFYSLLDELRKECE 120
                       IRRPN+EWDFFPYEQILDTMLHELCHIVHGPHNADFY+LLDELRKECE
Sbjct: 61  VNIAGGQEIKLRIRRPNSEWDFFPYEQILDTMLHELCHIVHGPHNADFYNLLDELRKECE 120

Query: 121 ELMSKGITGTGQGFDLRGRRLGGISHQPPLSSLRQTALAAAENRARGGPSGPKRLGG 155
           ELM KGITGTGQGFD+RGRRLGGISHQ PLSSLRQT L AAENRARG PSGPKRLGG
Sbjct: 121 ELMCKGITGTGQGFDVRGRRLGGISHQLPLSSLRQTTLTAAENRARGAPSGPKRLGG 177

[Close]
BLAST of IVF0002489 vs. NCBI nr
Match: XP_022928615.1 (DNA-dependent metalloprotease WSS1-like isoform X1 [Cucurbita moschata] >XP_022928616.1 DNA-dependent metalloprotease WSS1-like isoform X1 [Cucurbita moschata] >XP_022928617.1 DNA-dependent metalloprotease WSS1-like isoform X1 [Cucurbita moschata] >KAG6603250.1 hypothetical protein SDJN03_03859, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033552.1 WSS1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 282 bits (722), Expect = 7.49e-93
Identity = 143/177 (80.79%), Postives = 149/177 (84.18%), Query Frame = 0 

Query: 1   MDLNDLNKVWQVNPLKKIGEDDSRKVLEKIAKQVQPIMRKRRWKVETLSE---------- 60
           MDLNDLNKVW++ PLKKIGEDD+RKVLEKIAKQVQPIMRKRRWKVETLSE          
Sbjct: 1   MDLNDLNKVWEIKPLKKIGEDDARKVLEKIAKQVQPIMRKRRWKVETLSEFYPDNPGLMG 60

Query: 61  ------------IRRPNNEWDFFPYEQILDTMLHELCHIVHGPHNADFYSLLDELRKECE 120
                       IRRPN+EWDFFPYEQILDTMLHELCHIVHGPHNADFY+LLDELRKECE
Sbjct: 61  VNIGGGQEIKLRIRRPNSEWDFFPYEQILDTMLHELCHIVHGPHNADFYNLLDELRKECE 120

Query: 121 ELMSKGITGTGQGFDLRGRRLGGISHQPPLSSLRQTALAAAENRARGGPSGPKRLGG 155
           ELM KGITGTGQGFD+RGRRLGGISHQ PLSSLRQT L AAENRARG PSGPKRLGG
Sbjct: 121 ELMCKGITGTGQGFDVRGRRLGGISHQLPLSSLRQTTLTAAENRARGAPSGPKRLGG 177

[Close]
BLAST of IVF0002489 vs. TAIR 10
Match: AT1G55915.1 (zinc ion binding )

HSP 1 Score: 204.1 bits (518), Expect = 8.1e-53
Identity = 107/180 (59.44%), Postives = 126/180 (70.00%), Query Frame = 0 

Query: 2   DLNDLNKVWQVNPLK-KIGEDDSRKVLEKIAKQVQPIMRKRRWKVETLSE---------- 61
           +L DLNKVW++  LK K  ED++RK+LEK+A QVQPIM +R+W+V+ LSE          
Sbjct: 5   NLEDLNKVWEIKALKRKPREDEARKILEKVANQVQPIMTRRKWRVKLLSEFCPTNPRLLG 64

Query: 62  ------------IRRPNNEWDFFPYEQILDTMLHELCHIVHGPHNADFYSLLDELRKECE 121
                       +RR N++ DF  Y +ILDTMLHELCH  HGPHNA FY L DELRKECE
Sbjct: 65  VNVNRGVQVKLRLRRVNHDLDFLSYHEILDTMLHELCHNAHGPHNASFYKLWDELRKECE 124

Query: 122 ELMSKGITGTGQGFDLRGRRLGGISHQPPLSSLRQTALAAAENRARGG---PSGPKRLGG 156
           ELMSKGITGTGQGFD+ G+RLGG+S QP LS LR TA  AAE R R G   PSGP+RLGG
Sbjct: 125 ELMSKGITGTGQGFDMPGKRLGGLSRQPSLSFLRATAATAAEKRVRAGTLLPSGPQRLGG 184

[Close]
BLAST of IVF0002489 vs. TAIR 10
Match: AT5G35690.1 (CONTAINS InterPro DOMAIN/s: WLM (InterPro:IPR013536), PUB domain (InterPro:IPR018997), PUG domain (InterPro:IPR006567); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G55915.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 49.3 bits (116), Expect = 3.3e-06
Identity = 41/150 (27.33%), Postives = 64/150 (42.67%), Query Frame = 0 

Query: 37  IMRKRRWKVETLSEIR---------------------------RPNNEWDFFPYEQILDT 96
           +M K RW+V  ++E+                            R ++   F  Y+ I  T
Sbjct: 180 VMNKHRWRVGIMTELAPVGYVGVSPRCLLGFNKNQGEEISLRLRTDDLKGFRKYQSIKKT 239

Query: 97  MLHELCHIVHGPHNADFYSLLDELRKECEEL---MSKGITGTGQGF-------------- 143
           +LHEL H+V+  H+  FY+L  +L KE E L    S+G T  G  F              
Sbjct: 240 LLHELAHMVYTEHDEKFYALDSQLNKEAESLDWTKSRGHTLNGTKFINDDDEEDYFFDEN 299

The following BLAST results are available for this feature:
BLAST of IVF0002489 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9P7B59.1e-0931.45DNA-dependent metalloprotease WSS1 homolog OS=Schizosaccharomyces pombe (strain ... [more]
P388382.0e-0831.50DNA-dependent metalloprotease WSS1 OS=Saccharomyces cerevisiae (strain ATCC 2045... [more]
BLAST of IVF0002489 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7V0N82.4e-8187.78DNA-dependent metalloprotease WSS1-like OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A1S4DV146.0e-8087.57LOW QUALITY PROTEIN: DNA-dependent metalloprotease WSS1-like OS=Cucumis melo OX=... [more]
A0A6J1DF711.3e-7481.92DNA-dependent metalloprotease WSS1-like isoform X1 OS=Momordica charantia OX=367... [more]
A0A6J1EKF18.4e-7480.79DNA-dependent metalloprotease WSS1-like isoform X1 OS=Cucurbita moschata OX=3662... [more]
A0A6J1HRV88.4e-7480.79DNA-dependent metalloprotease WSS1-like isoform X2 OS=Cucurbita maxima OX=3661 G... [more]
BLAST of IVF0002489 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0060046.19.10e-10587.78DNA-dependent metalloprotease WSS1-like [Cucumis melo var. makuwa][more]
XP_016899550.16.73e-10187.57PREDICTED: LOW QUALITY PROTEIN: DNA-dependent metalloprotease WSS1-like [Cucumis... [more]
XP_022151616.16.92e-9481.92DNA-dependent metalloprotease WSS1-like isoform X1 [Momordica charantia] >XP_022... [more]
XP_023543567.17.49e-9380.79DNA-dependent metalloprotease WSS1-like isoform X2 [Cucurbita pepo subsp. pepo] ... [more]
XP_022928615.17.49e-9380.79DNA-dependent metalloprotease WSS1-like isoform X1 [Cucurbita moschata] >XP_0229... [more]
BLAST of IVF0002489 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G55915.18.1e-5359.44zinc ion binding [more]
AT5G35690.13.3e-0627.33CONTAINS InterPro DOMAIN/s: WLM (InterPro:IPR013536), PUB domain (InterPro:IPR01... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 83..103
NoneNo IPR availableGENE3D3.30.2010.10Metalloproteases ("zincins"), catalytic domaincoord: 24..106
e-value: 2.0E-5
score: 26.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..158
NoneNo IPR availablePANTHERPTHR46622:SF3ZINC ION BINDING PROTEINcoord: 51..156
NoneNo IPR availablePANTHERPTHR46622:SF3ZINC ION BINDING PROTEINcoord: 1..51
NoneNo IPR availablePANTHERPTHR46622DNA-DEPENDENT METALLOPROTEASE WSS1coord: 51..156
coord: 1..51
NoneNo IPR availableCDDcd07344M48_yhfN_likecoord: 70..93
e-value: 1.32166E-5
score: 39.7338
IPR013536WLM domainPFAMPF08325WLMcoord: 51..157
e-value: 1.1E-27
score: 97.4
IPR013536WLM domainPROSITEPS51397WLMcoord: 1..144
score: 23.037811

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0002489.2IVF0002489.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008237 metallopeptidase activity