IVF0002488 (gene) Melon (IVF77) v1

Overview


Name	IVF0002488
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	E3 ubiquitin-protein ligase RGLG4
Location	chr11: 23075674 .. 23085158 (-)
RNA-Seq Expression	IVF0002488
Synteny	IVF0002488

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCTCCTCCGCATCAAAGAGACTCGCAATCAATTTCAGGCACATAAAAAGCTTCACTTCTTCCCTAACTCAGAAATTTCCGCTCAAGAATCAAATTCCTTTCTTCAATTTATTCTTCTCTCAAATTCCAATAAAACTCACATCCCCTGCTTTTCGAATCCCACCCAATTGAGCGCTACAATATGCCCTTAACCGTAAGAAAATAATTTTTATCTTCGCTACCAGAATATTATTTGCTTTTGAGATTTATATTTTGTAATTTTCGTCCTCTAATTTCAGTGGTTGAGCAATATGGGTAACCGGGTGAGCTCGTCGGCTAAACGGAGCGACGGCGGTGTAAAGGGTGGAAAAACGGCAGCCGTGGGGAAAGAAGCGTCGGTTCAGAAAAGTGACGGCGGCGGGGGCGGAAGTAGTCGTGGCAAGTCGTTGTGGCGGCCTGGGAAGAAGGTCGATTTTCCGAAGAAATATGGATTCATAGCGGATAACTTCTCCTCTATTGACCAGGTTTCTCTCTCTCTTCCTCATCGGAAAGTAAAATAGTTTTTTAGCACAATTTCAATTTCTCAATTATTGTTTCCTTACTTTTCAAATTATTTACTAAATATCTTTTTGTTTTTAACTATAGTTAAAATAATTACTAAATTATAAAAAAACAAGACCGTTAAAAGTTTTATTTAAAAAATATCTCCAAACTAATAAAAAATTTCATAGATATCTAAATTTAAAAATAAAAACAAAGTATTCTTATTAATCCATTTTTTATACTAAAATTTTGTTATTTAAAATAGAAACAAGAGTTTTAAACTAAAACTATGGCATTAAGTTTCCATTGATTATCGATATTTTTACCAATCTTAAGTTTCTATCAATTATCGGTATTTTCACATTTCCATAGATTCAATATCTCTTCTTCTAAATATTATTTTTAAGATGTAATGGAAATGTCGATTTATTAGAGGAAGAGAAAAAAAAACATCATAGCGAATCACAAAATATTTCAAACTTGAGGCACTAAAAAATGTACACATGAATTGTATTTAGCATATGAGTTGAAAAGGTGAAATAGGATGACAATATGTTAAAAGTGTGACAATCAAAATTTAGAATACAATGATTTTTTAGTTTTTTTTATAGAACATCAATTTACCACCAAGTCTTTAACTAAAAATTAAAACCTTAGATTATTAAAAATGATTATTTTATTGGACATCCTAATCATTAAAAATAGAAATAATATCATTATTTTGTTAGAGAGTTGACGACATAAACAAAAATGTATTCTTTTTAAAAATTTACGAATTAAAACGACTTGTTAAAAATTTAAAGACTAAAATAGAATAGGATACAAAATTTGGGTAGGATTTGCAACAAAATTAAGTGATGGGTACTAACGTGAATAAATTATTATTTCACATGTTACTTGGTGATAATTAAAAAATGAAAAAGAAGAGAGGTGTAATAATCATTATTGAGAAGTGTATTGTGTTGTTGGTGGGCCAAAAAGAGTGGACATTTAGACATGATTGGATAGAATGGAGGTTTACTCCAAAGGGCGTAGGAAATTGAAATAGGTTCCTACTACTCACTTATGTTTCCATTTATTTATACATTAATAATAATCCTGCTTGCCTCTATTAATATACACTTTAATGCACCCCCACCAACCTTTTTTACTTACACACGTTTGGTCTCCCAAATTGAATTGGGTTGAGTGAGGTTGGTAAAAATGACTTACTTACCATTTGGTTCATCCTCATGTTAATTTACATATTATTTAGAAATCTGTTTCTTTTTTGCATATCTACTACAATTTTATCCTTTACAAACTTGTTTTGGTTTTTAGAATTTTATTTTATCATAATTGATTGAAAAATTAAATACCTAACATATATTTTGAAAAAAAAAACATTAATTTAATATTTCTAAATTTTAGATTTATACTTACTTAAAATACCAAACCAAAAATATCGTCAATTTAAACTATAAATTTTCATAGATATATTAATTTATAGGTTAATTTTTTTATTTTGGTTCTTAAAGTTTGTATCTTGTTCTATTTTAGTTCCTAAACTATTTAAAATATCTATTGTGGTCTTCAAACTTTGGAAAAACAATCTTACTTTGGTCCATGTCATTAGAATTACGTTAACTTTTAATTGAATTATGGTGTGAATTTTACATTTAGATGATTAGGCTCTATAATATTTATCATATTAATTAAATTGATAAGTAACCAAGAAATCTTTGATGGCAACATTTAAACATAATCAAATAAAACTCACACATTGAGTAGAATAAAAAAAGGAAAAAAAAACTAAAATAATTACAACTTAGGTATAAAATAAACAAATAAATATTCACACGATGAATCACACAGCTTGAAAAAGAGAAAAAGAGAAGAATAAAGAATTAGAAGGAAGAGAAAAGGAGCACTTGCATGATTCACAAGGAAAAAATGTACGTAGGCATAAATTGAGAAAGCCGAAGTAGAATAGCAATAAGTCAAAATGATGATCATCAAATCTCGAAGACAATTAAATATAATTTAGGATCAAATGAAAGCTTTAAATTATTAAGAGCAATTATCTATTTGACATTTTATTTATGAAAATATTGGAGTTAATTCATCCACTAGGAAGTTAAGGGGCTCTTTCATTTATCATTGTGGGTTTAGGTTTCCATAACACTAACCCTTGCTGGGGCCCAATTTATGGAAACGTTTTAGGGTTTCTATAATCCTTCCAAATCCTTTTTACATTATTTCTTCCCTCTCTCTTTGCCTCTAAATAATACCCCCTTGAAATCGTGGTACTCCTTCCCTTTCTCTCTCTGCCTAATACTCCTTGAAACCGGTAATCTTTGTCGATTTTTTTTCATCCTTCCTTTCTTTGTCCAATTTTGTCTTCTTCCTTTTTCACCATTTCTGTCTTCATTTTCTTTTCCTCTCCAAACCACAAAGAATATCTACTTCTCCTAATAAATCTTCTCCTCCATCGAAGTACTTTTTCTATGCCGACACCGTCGCCCCGCTTAGGTTTTAAAAGAAACTCATCAGAACAACATAAATAATGAGGAAGAAAAAGAAAGGAAGATATGTAGTTTGAAAATCTGCAAAATAGGAAGAGATTTATGTGTGATTGAGGCGTTTTTCATTTTTTTTCTTGATTTTTTGTTTTTTTGTTTTGGTTTGGAAAACTAAAATCACTCTCATTATACACATGAAGTTTTAGGAAAAAGGATGACTAAATTTGTATCTAAAATGTGGATTTTGCCTCCTCTTCTTGTTTTTGAGACTGTATTTTCTCTTTTTCTTTTTTACCTTTAATATTTTGGGTTTGATTTTAATAAATTAGATGATAAATAACATTGAGATTTTACTATATTTCATTGATTTCTGCAATGAGTATGTAAAATTAGTCATTAATTGACACTAATCTACTTCAAAATGACCTTTCTTAACAAGTTTTTATACTTACCTTAATAAGTTTTTATATTAATTGACAATATTATACTTACCTTAATAAGTTTTTATTTAATAAAATTTCTATTTGTCATTTTAAGATTTTCTTTGTCTAAAGAAATTTTGATTGATTCATTTTTTTTGTTCATTTTATTTACAAAATTGTTTGAAAAGGGCTATAAAATTAGTTTGCTAAACCATCTCACAATTATGTAATAAGAAATGCATAATTTAAAACAGTCTCATAATTATGTAATAAGAAATGCATAATCGATCGTTAATTTTGTTGCTACAAAAGAAATTTGGAAAAAATGTAAAGGGTGAAGTTATGAGTTATTATTTCAATTATATATATTATAAACAAACATAAAGCTGAATTTAACAAATGACATTAAGAACTTAATGAAAAATTAGATTAAAAATGTGAATGGGAGAGATTAAATTAAAACAAAATATATACAAATTTCATTTTCAATAATGAGATGGTAACATTTATAATATCGATAAAAAAAAATACACTCATCTCAAATTAACATCAATAATGTGGTAATTAAGAAAATTAAGACAATGATTTTAAGAAAAATAAGACTATTTAATAGTTTATGTTTGTACCGACCTGGTTGCTTCTTATTTGTTTACTTTCTTTTTTGGTATGATGTTGACTGTTTATGCTTTTGCTATTGTAGACAACTATTTTTTTTCTTTTGTAATGTTTATTTAAAATTAAGTAAAATAGTCACAATTTCATCCAAGCTTATAACATGTAATTATATATATTCAAGATAGGGGACATCATTATCGCCAATTACAAATAGGAAATAATTAATTTGTCTTCCTAAAAAATTAATTTTAATAATTTTTTTTGATAAATTATTTCTAAAGACAACTGTTTTTATTAATTTAATAACATTACACATACAACTATATTTCTAAACCATTCTCCTACACAAGGCACTAGTTTTATCATAACACTAACCCTTCCCTTAAAAGTACCATAAAGTTTTAAAAAATCGGACCAAAATACATACAAAATTTAGACAACAAAGTAAGATTTAAACCAAATTCGTTCCGAACATAAATTAATATTCCTCTATTTTCTTTTAAAAGAGAACGTTAGACAATTTCCGAAAAAGTTTTTTTTTAATATCTCCTTAGCACACACTATGTGAACTATGAACTACGTTGGTTTAAACGATTTCGAAAAGTTTTGCATACGTACAGTTATGATTAAGTATTTAAAAGCTGTGACGAATTTCAGAAATTTGAATTTCCATTTGACTAATTCCGATCACTGCAATTTCACTTCTTCAATCTACAGGTTACCTCAGCATTGAGAAAAGAAGGATTAGAATCGTCGAACCTCATCGTCGGAATTGATTTCACCAAAAGCAACGAATGGACAGGTCTGTCCTCGAATCAATCACATTCTTAATTCACATTTCTCATTCTTCATATTTCCTAATTGCTTACTTAAATCTCGGCCGATTCCGCCGTCGCCGTTGTTGGCGCGCAGGTAAAGTATCGTTCAATAATCGGAGCTTGCACGCCCTTTCCGATTCTCCTAATCCCTACCAGAAGGCTCTCTCCATCATCGGGAAAACTCTGGCTCCCTTCGATGAAGACGGCTTAATTCCTTGCTTCGGTTTCGGTGACGGTACGCTCCGCCGCCCCCCACGGCGGCAATTTTGCCTTTGTTTAATCCCTCCTCGTATTTTTCTATGGATGGCCCTTTTGTGGGATCAAATGAAAATTAGCCCTTTTAAAATTAAGGAATTTTGGCCTTCTCTAATTTTTATCTCCCTTTTTTTATTTGCATTTTTTAAATAAAAAAAATCACACTTAGTCCTAAAAGTTTTTTTAAAAGTAACGATTGAACGTTTAAACTTTAGTTTGTAATGATATAATCCTTGTATTTTCAAGTTTTTGTTGCTAAGTTTATAGGAAATAAACGTAACAAATTTGGATTACATTATTATATATCAAAGTTCGGAAACTAAGTTCCTACTTTTTTACAAGTTTCGAACCACAACCTTTTTATCAATTGACTTATTCCTTCTCTTTTTCTTCTATCTACATTTTCTTTTTCAATCGTTCCTTCTTTCTATTTAGTGTGCAACACTTTTTTAAGTGATTGATAAAGAGCGTCGAGGTAGAGAAAAATTGGACAAGAACGTTTATACAATAGAGAAGCGAATTGAGAAGATATAAGAAAAAAGAACATTTTTTACCGTGGAGAAATAAATTGATGATAATATAATAAAACAAGTGAGAACGTTGTGCATCATTTTTGGGTCAAAATTGTAATTTTCACATAGATGCAAGCAAAATGTCAAAATTTATTAATTTTAAAAAGGATCATTCGTACAAAAAAAAAGAAGAAAAAGAAAAGAACACACTTATTATTTGATTTAGTTTGGTGATTTCATTGCTTTACACTCTATAACACACAGCTACAACGCACGATCAAATGGTGTTCAGTTTTCACAACGACAATTCGCCGTGCCATGGATTTGAAGAAGTTCTTGACTGCTACAAAAACATAATTCCCAATGCTCAACTTTCAGGTTAGTGTTTGATTCGGTGAGAATCTTATTTCAAAAAAACAAACGAGTTATTCTTCTCGTTACAAATTGAATTTGAAATGGAACTCGAATACCATCTATCCACCATTGTAATAGCAATTGCTTTAATGGATGTGATTTATACTTACAGGACCAACTTCTTACGGTCCTGTTGTTGAAGCTGCAATGGATATTGTAGAGAAGAGTGGTGGGCAATTTCATATTCTTCTCATTGTTGCTGACGGACAGGTTCATATTTAAACTTTTGTTTTTACTGTCTTTCAAATTATTTTCATTATTCTGCATGGCTAAAAGAATTGAGACAATTGTAAGTGCAGCAGTCGTGTTTCAAAGTATTTGCATATATAACCCAATAAAAAATTTATAAATATAACAAAATTTATATCAAATTTTCAAAGTTTATTTGTATTAATAGTTTATTAGAACATCAATAGTTTATCATATATATTAACATTTTGTTATATTTACCATTTTTAAAAATGATAGTGTTCACTTGTTTGTTAGTCCTGAAAATATTACCCATTACAATTAACCAAAAGAATTATTCCTAGGAGTAAGCTTAGCCAGAAATATCTTGCATGCACTCTTGGCTCTCTTTAGGTGGAGGTGGTGGAGGTACATTTTTGTATAATAAAGGAAAAAAAAAAAATACATTTTTTACCTTTAAGTTTAGTTTAGTTTATATTTATTTGATGTCTAAGAATTTAATTATATATTTTTGGTTTGATTTTAGTTTAGTATTTTAACCTTGGGATTTGAATTTTATATATATAAAATTTGATTTTTTAATTATTAAGTAGTCAATTTTAAGTATCTGATGTTAATGTTTAATAATTAATTTAAGATGATCATGAAGTAAAATTTTAATACAGATGAGAACAAAGAAAGAGGAGTTTTCAAATACAACAAAATGAACTAAAATATTTATAAAAAATAACAAAAATTTTAAATATATCAATGATAGAAATTGATATATAAAATTTAAAATTTTGCTATATTTATAAAATTATAATTGCCATAATTGATAATTATCATCGACATACTTTGAATGTCTGCTATATTTGTAAAACCATAATTTCCATAATTGATAGTCTAACAAGATAGATTTTAAAATTTTACTATATTAATAAATATTTTCATAATTTTTCATTTACAATAATCCTTCACAACTTAATTTATAATCGCTATAAGTATTTTTGAATTAATTAATAAAAGATGACACTAAGAAGGGTGAATATTGAAAACAAAATGTTTTTAAAATTTCAAATCATCAAAACAATATATTAAATAATTTATGAAAGATTTGTTTTCAAGATTTGTTTTCAAATATAACAAAATAAATAGAAATATTTATAAATATAGAAGATATCTATTAATTACAAACATTAATAAACTATTAATAAACTACTAATCTATCATAAAGTAAAATAGCATTAGAAATATTTTCAATTATTTTATCATTTAAAATCGTTACCCTTAATTTAATTTTACAAAGGAAGGGTTTGATTTTATTTGGCAAAGGTTACTCGAAGCTCCAGTGTTGGCGATGGTGAATTGAGCGTTCAAGAGGAGAGAACAATCAAAGCAATTGTCGATGCAAGGTAGATAACAACAATAATAACCTCAGATTTTCATAATCTAATCTCATTGCATATTTTGATATATTCTCTTGTTCTTAATATCCAGTGCATATCCTCTTTCAATCATTCTTGTTGGAGTTGGAGATGGTCCTTGGGACGACATGAAGAAGTTCGACGACAAGATTCCAGCTCGGGATTTCGATAATTTCCAGGTTTCTTAAGCAATCCATGACTTGGATCAGTTCAGTTAAATTCAATCATAAACATCAGTAGAATCACTCTCTGATCTTGCATTCTTCCTGATAACTACATAACAGTTTGTTAACTTCACTGAAATAATGTCGAAAAACATTGGCGTGCCGGAAAAAGAAGCAGCTTTTGCTTTAGCTGCATTAATGGAGGTTCCTTTCCAGTACAAAGCAGTCACAGAAATGGGTCTTATAGGGTAGAGCTCTCACTCTTCTGATATTGCCCCCTTCCAATCCTAAGGTTAGCTTTGGCTTACTAGTGACTACTACTAACTCTGCTTCTTTTGATATGGAGCCAAGACATGTGACAGTGAAAGCAAAACATATCGTGCCACGACCCCCACCGACACGTTATACTCGTCCTACACGACTTACTTCTGTACCAAGCAACACCTCCTCAACTTCTGCATCTGATGAACATAGTCAGGTATGTTCTGGCAGTGTTTTTTAAAGCTTAAGATGCAATAAAGCACAACAGTCTTTCAGGGCTTGAATGGAGGATACAACTTATCTTTACTGAAGTGCACTGATACTATATAAAAAGAACTTCACAAAGAGAAAGAACAGTTGAAGTGAAAAAATATAGAAAAAAATCCCAAACTCAGAAAATATACTTTCAGACTTAGTAAATTTGACTTTTTAAGCTAATAAAGGAAAAAGTCACACAAGGCTTGTATCCGGGAGGGATATTTAAAACACTGTGCGCACGTTCATTTGTTTGCTTATTGCTCTATAATTCAGGGTTTCACTATTGCATCCAAATTTGGATGAACAATAACATTATTTCCAATTGAAATGCAGGTCTGCCCCATTTGCTTGACCGCGGGAAAGGACTTGGCCTTCGGATGCGGCCACATGGTTGAGAAATCGAACTATTTAATATCTACTAAACAATTATTTATTCACTACTTCAAAGAAGTCACCTGCATGTACATTATGAGATAATGATATGCATAAATAAACAAAAAACGAATCAGTGGATCATTCTTCATATCATATTTTATACCATTCCCACTTGTTGCAACCTCTTTAATACACGTCTACTAACATTCAAACATTGCAGACTTGTAGGGAATGTGGATCAAGATTGTCCAATTGCCATATATGTCGCCAGCCTATCAGAAACCGAATAAGGCTGTATACTGGGTGATCGGATGGCAGCAAGTGGACAGTGAGATGATGTCAATGTTAATCAGATGGAAATGATGTACAGGAATCTAGGGTTAGACGATCAAGAAATGTATGTCTTATGGACAGAACTAGGATTGTTCTACTTTAGGGTGTAACTAGGATTGTTCTATTTTAGGGTATCTTGTGTGTATGTGTGTGTGGTGAGGTTCAAATTCCCAACGGATGTGTTCCTAAGTCCTATGTTAATCAGATGGAAATGATGCATCATATTTTAGGGTTTCTTGTGTATAGAGAAAACAACGTGTTCCTAAGTCCTATGTAGTTGTAAAAACAACGTAGTATAGTTTCCGACTCCGTGTCAATATTTTGTGATGAAAAAAGGATTTGAAATTTTCATTGTTTATTTGTAATTTGGGCATTAATCTCTTTTCATTTCATCAATAGAAAGTTTCGTCCAATGATGTATATGAAAAAGAGGCTTCTAG

mRNA sequence

TCCTCCTCCGCATCAAAGAGACTCGCAATCAATTTCAGGCACATAAAAAGCTTCACTTCTTCCCTAACTCAGAAATTTCCGCTCAAGAATCAAATTCCTTTCTTCAATTTATTCTTCTCTCAAATTCCAATAAAACTCACATCCCCTGCTTTTCGAATCCCACCCAATTGAGCGCTACAATATGCCCTTAACCTGGTTGAGCAATATGGGTAACCGGGTGAGCTCGTCGGCTAAACGGAGCGACGGCGGTGTAAAGGGTGGAAAAACGGCAGCCGTGGGGAAAGAAGCGTCGGTTCAGAAAAGTGACGGCGGCGGGGGCGGAAGTAGTCGTGGCAAGTCGTTGTGGCGGCCTGGGAAGAAGGTCGATTTTCCGAAGAAATATGGATTCATAGCGGATAACTTCTCCTCTATTGACCAGGTTACCTCAGCATTGAGAAAAGAAGGATTAGAATCGTCGAACCTCATCGTCGGAATTGATTTCACCAAAAGCAACGAATGGACAGGTAAAGTATCGTTCAATAATCGGAGCTTGCACGCCCTTTCCGATTCTCCTAATCCCTACCAGAAGGCTCTCTCCATCATCGGGAAAACTCTGGCTCCCTTCGATGAAGACGGCTTAATTCCTTGCTTCGGTTTCGGTGACGCTACAACGCACGATCAAATGGTGTTCAGTTTTCACAACGACAATTCGCCGTGCCATGGATTTGAAGAAGTTCTTGACTGCTACAAAAACATAATTCCCAATGCTCAACTTTCAGGACCAACTTCTTACGGTCCTGTTGTTGAAGCTGCAATGGATATTGTAGAGAAGAGTGGTGGGCAATTTCATATTCTTCTCATTGTTGCTGACGGACAGGTTACTCGAAGCTCCAGTGTTGGCGATGGTGAATTGAGCGTTCAAGAGGAGAGAACAATCAAAGCAATTGTCGATGCAAGTGCATATCCTCTTTCAATCATTCTTGTTGGAGTTGGAGATGGTCCTTGGGACGACATGAAGAAGTTCGACGACAAGATTCCAGCTCGGGATTTCGATAATTTCCAGTTTGTTAACTTCACTGAAATAATGTCGAAAAACATTGGCGTGCCGGAAAAAGAAGCAGCTTTTGCTTTAGCTGCATTAATGGAGGTTCCTTTCCAGTACAAAGCAGTCACAGAAATGGGTCTTATAGGACATGTGACAGTGAAAGCAAAACATATCGTGCCACGACCCCCACCGACACGTTATACTCGTCCTACACGACTTACTTCTGTACCAAGCAACACCTCCTCAACTTCTGCATCTGATGAACATAGTCAGGTCTGCCCCATTTGCTTGACCGCGGGAAAGGACTTGGCCTTCGGATGCGGCCACATGACTTGTAGGGAATGTGGATCAAGATTGTCCAATTGCCATATATGTCGCCAGCCTATCAGAAACCGAATAAGGCTGTATACTGGGTGATCGGATGGCAGCAAGTGGACAGTGAGATGATGTCAATGTTAATCAGATGGAAATGATGTACAGGAATCTAGGGTTAGACGATCAAGAAATGTATGTCTTATGGACAGAACTAGGATTGTTCTACTTTAGGGTGTAACTAGGATTGTTCTATTTTAGGGTATCTTGTGTGTATGTGTGTGTGGTGAGGTTCAAATTCCCAACGGATGTGTTCCTAAGTCCTATGTTAATCAGATGGAAATGATGCATCATATTTTAGGGTTTCTTGTGTATAGAGAAAACAACGTGTTCCTAAGTCCTATGTAGTTGTAAAAACAACGTAGTATAGTTTCCGACTCCGTGTCAATATTTTGTGATGAAAAAAGGATTTGAAATTTTCATTGTTTATTTGTAATTTGGGCATTAATCTCTTTTCATTTCATCAATAGAAAGTTTCGTCCAATGATGTATATGAAAAAGAGGCTTCTAG

Coding sequence (CDS)

ATGCCCTTAACCTGGTTGAGCAATATGGGTAACCGGGTGAGCTCGTCGGCTAAACGGAGCGACGGCGGTGTAAAGGGTGGAAAAACGGCAGCCGTGGGGAAAGAAGCGTCGGTTCAGAAAAGTGACGGCGGCGGGGGCGGAAGTAGTCGTGGCAAGTCGTTGTGGCGGCCTGGGAAGAAGGTCGATTTTCCGAAGAAATATGGATTCATAGCGGATAACTTCTCCTCTATTGACCAGGTTACCTCAGCATTGAGAAAAGAAGGATTAGAATCGTCGAACCTCATCGTCGGAATTGATTTCACCAAAAGCAACGAATGGACAGGTAAAGTATCGTTCAATAATCGGAGCTTGCACGCCCTTTCCGATTCTCCTAATCCCTACCAGAAGGCTCTCTCCATCATCGGGAAAACTCTGGCTCCCTTCGATGAAGACGGCTTAATTCCTTGCTTCGGTTTCGGTGACGCTACAACGCACGATCAAATGGTGTTCAGTTTTCACAACGACAATTCGCCGTGCCATGGATTTGAAGAAGTTCTTGACTGCTACAAAAACATAATTCCCAATGCTCAACTTTCAGGACCAACTTCTTACGGTCCTGTTGTTGAAGCTGCAATGGATATTGTAGAGAAGAGTGGTGGGCAATTTCATATTCTTCTCATTGTTGCTGACGGACAGGTTACTCGAAGCTCCAGTGTTGGCGATGGTGAATTGAGCGTTCAAGAGGAGAGAACAATCAAAGCAATTGTCGATGCAAGTGCATATCCTCTTTCAATCATTCTTGTTGGAGTTGGAGATGGTCCTTGGGACGACATGAAGAAGTTCGACGACAAGATTCCAGCTCGGGATTTCGATAATTTCCAGTTTGTTAACTTCACTGAAATAATGTCGAAAAACATTGGCGTGCCGGAAAAAGAAGCAGCTTTTGCTTTAGCTGCATTAATGGAGGTTCCTTTCCAGTACAAAGCAGTCACAGAAATGGGTCTTATAGGACATGTGACAGTGAAAGCAAAACATATCGTGCCACGACCCCCACCGACACGTTATACTCGTCCTACACGACTTACTTCTGTACCAAGCAACACCTCCTCAACTTCTGCATCTGATGAACATAGTCAGGTCTGCCCCATTTGCTTGACCGCGGGAAAGGACTTGGCCTTCGGATGCGGCCACATGACTTGTAGGGAATGTGGATCAAGATTGTCCAATTGCCATATATGTCGCCAGCCTATCAGAAACCGAATAAGGCTGTATACTGGGTGA

Protein sequence

MPLTWLSNMGNRVSSSAKRSDGGVKGGKTAAVGKEASVQKSDGGGGGSSRGKSLWRPGKKVDFPKKYGFIADNFSSIDQVTSALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHALSDSPNPYQKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEEVLDCYKNIIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQVTRSSSVGDGELSVQEERTIKAIVDASAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNIGVPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTVKAKHIVPRPPPTRYTRPTRLTSVPSNTSSTSASDEHSQVCPICLTAGKDLAFGCGHMTCRECGSRLSNCHICRQPIRNRIRLYTG

Homology

[Close]

BLAST of IVF0002488 vs. ExPASy Swiss-Prot
Match: Q9SAL0 (E3 ubiquitin-protein ligase RGLG4 OS=Arabidopsis thaliana OX=3702 GN=RGLG4 PE=1 SV=1)

HSP 1 Score: 504.6 bits (1298), Expect = 1.1e-141
Identity = 241/354 (68.08%), Postives = 289/354 (81.64%), Query Frame = 0


Query: 65  KKYGFIADNFSSIDQVTSALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHALSDSP 124
           KKY  I D FSS+DQV+ ALR+ GLESSNLI+G+DFTKSNEWTGK SF+ + LHAL ++ 
Sbjct: 51  KKYALIPDRFSSLDQVSKALREAGLESSNLILGVDFTKSNEWTGKTSFDGKCLHALGETS 110

Query: 125 NPYQKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEEVLDCYKN 184
           NPY+KA+ +IG+TLAPFDED LIPCFGFGD+TTHD+ VF FH+DNSPCHGFEEVL CYK 
Sbjct: 111 NPYEKAIFVIGQTLAPFDEDNLIPCFGFGDSTTHDEEVFGFHSDNSPCHGFEEVLACYKR 170

Query: 185 IIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQVTRSSSVGDGELSVQEERT 244
           I PN +LSGPTSYGP+++AA+DIVEK+ GQFH+L+IVADGQVTR + + +GELS QE+ T
Sbjct: 171 IAPNLRLSGPTSYGPLIDAAVDIVEKNNGQFHVLVIVADGQVTRGTDMAEGELSQQEKTT 230

Query: 245 IKAIVDASAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNIGVPEK 304
           I AIV+AS+Y LSI+LVGVGDGPW+DM+KFDDKIP R+FDNFQFVNFTEIM++N     K
Sbjct: 231 IDAIVNASSYALSIVLVGVGDGPWEDMRKFDDKIPKREFDNFQFVNFTEIMTRNSPESAK 290

Query: 305 EAAFALAALMEVPFQYKAVTEMGLIGHVTVKAKHIVPRPPPTRYTRPTRLTSVPSNTSST 364
           E AFALAALME+PFQY+A  E+ L+G  T  AK IVPRPPP  YT PT    +PS  S  
Sbjct: 291 ETAFALAALMEIPFQYQAAIELRLLGKQTGLAKTIVPRPPPIPYTPPTN-AELPSTAS-- 350

Query: 365 SASDEHSQVCPICLTAGKDLAFGCGHMTCRECGSRLSNCHICRQPIRNRIRLYT 419
            AS E +Q CPICLT  KD+AF CGHMTC +CGS++SNC ICR  I NR++LYT
Sbjct: 351 PASPEQTQSCPICLTNRKDVAFSCGHMTCGDCGSKISNCPICRVRITNRLKLYT 401

[Close]

BLAST of IVF0002488 vs. ExPASy Swiss-Prot
Match: Q8LB88 (E3 ubiquitin-protein ligase RGLG5 OS=Arabidopsis thaliana OX=3702 GN=RGLG5 PE=1 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 5.6e-122
Identity = 221/369 (59.89%), Postives = 268/369 (72.63%), Query Frame = 0


Query: 65  KKYGFIADNFSSIDQVTSALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHALSDSP 124
           +KY  IADN+ SID+VT+AL   GLESSNLIVGID TKSNEWTG  SF  +SLH +  +P
Sbjct: 65  RKYSRIADNYRSIDEVTAALSHAGLESSNLIVGIDVTKSNEWTGARSFGRKSLHFIGTTP 124

Query: 125 NPYQKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEEVLDCYKN 184
           NPYQ+A+SIIGKTL+ FDED LIPC+GFGDATTHDQ VFSF+ +++ C+GFEEVL CY+ 
Sbjct: 125 NPYQQAISIIGKTLSVFDEDNLIPCYGFGDATTHDQDVFSFNPNDTYCNGFEEVLMCYRE 184

Query: 185 IIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQVTRSSSVGDGELSVQEERT 244
           I+P  +LSGPTS+ P++E AM IVE+SGGQ+H+LLI+ADGQVTRS    +G  S QE++T
Sbjct: 185 IVPQLRLSGPTSFAPIIERAMTIVEESGGQYHVLLIIADGQVTRSVDTDNGGFSPQEQQT 244

Query: 245 IKAIVDASAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNIGVPEK 304
           I AIV AS YPLSI+LVGVGDGPWD M++FDD IPAR FDNFQFVNFT+IMSKNI    K
Sbjct: 245 IDAIVRASEYPLSIVLVGVGDGPWDTMRQFDDNIPARAFDNFQFVNFTDIMSKNIDPARK 304

Query: 305 EAAFALAALMEVPFQYKAVTEMGLIGHVTVKAKHIVPRPPPTRYT-------RPTRLTS- 364
           EA FAL+ALME+P QYKA  E+GL+G  T      +  PPPT  T       R +R TS 
Sbjct: 305 EAEFALSALMEIPSQYKATLELGLLGQRTGHCPDRIALPPPTYATQSMRNSPRTSRSTSF 364

Query: 365 --------VPSNTSSTSASDEHSQVCPICLTAGKDLAFGCGHMTCRECGSRLSNCHICRQ 418
                   V S   ST+ ++   Q CP+CL + K++AF CGH TC  CG  L  C ICR 
Sbjct: 365 QNKPYDNGVSSTPPSTTHNESQQQFCPVCLVSAKNMAFNCGHQTCAGCGEDLHVCPICRS 424

[Close]

BLAST of IVF0002488 vs. ExPASy Swiss-Prot
Match: Q9LY87 (E3 ubiquitin-protein ligase RGLG2 OS=Arabidopsis thaliana OX=3702 GN=RGLG2 PE=1 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 1.5e-119
Identity = 218/379 (57.52%), Postives = 272/379 (71.77%), Query Frame = 0


Query: 65  KKYGFIADNFSSIDQVTSALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHALSDSP 124
           +KY  I+D++SS++QVT AL + GLESSNLIVGIDFTKSNEWTG  SFN +SLH +  SP
Sbjct: 94  RKYSKISDDYSSLEQVTEALARAGLESSNLIVGIDFTKSNEWTGARSFNRKSLHFIGSSP 153

Query: 125 NPYQKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEEVLDCYKN 184
           NPY++A++IIG+TLA FDED LIPC+GFGDA+THDQ VFSF++++  C+GFEEVL  YK 
Sbjct: 154 NPYEQAITIIGRTLAAFDEDNLIPCYGFGDASTHDQDVFSFNSEDRFCNGFEEVLSRYKE 213

Query: 185 IIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQVTRSSSVGDGELSVQEERT 244
           I+P  +L+GPTS+ P+++ AM IVE+SGGQ+H+L+I+ADGQVTRS    +G+LS QE++T
Sbjct: 214 IVPQLKLAGPTSFAPIIDMAMTIVEQSGGQYHVLVIIADGQVTRSVDTENGQLSPQEQKT 273

Query: 245 IKAIVDASAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNIGVPEK 304
           + AIV AS  PLSI+LVGVGDGPWD M++FDD IPAR FDNFQFVNFTEIM+KN     K
Sbjct: 274 VDAIVQASKLPLSIVLVGVGDGPWDMMREFDDNIPARAFDNFQFVNFTEIMAKNKAQSLK 333

Query: 305 EAAFALAALMEVPFQYKAVTEMGLIGHVTVKAKHIVPRPPPTR-------YTRPTRLTS- 364
           E  FAL+ALME+P QYKA  E+ L+G          P PPP R         +P+RL S 
Sbjct: 334 ETEFALSALMEIPQQYKATIELNLLGRRNGYIPERFPLPPPMRGGSSSYNSPKPSRLPSF 393

Query: 365 ------------------VPSNTSSTSASDEHSQVCPICLTAGKDLAFGCGHMTCRECGS 418
                             VP  TSS S     +Q+CPICL+  KD+AFGCGH TC ECG 
Sbjct: 394 KPSVPPHPTEGYHVRSSPVPPPTSSAS----DNQLCPICLSNPKDMAFGCGHQTCCECGP 453

[Close]

BLAST of IVF0002488 vs. ExPASy Swiss-Prot
Match: Q8RX26 (E3 ubiquitin-protein ligase RGLG3 OS=Arabidopsis thaliana OX=3702 GN=RGLG3 PE=1 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 8.3e-118
Identity = 207/355 (58.31%), Postives = 263/355 (74.08%), Query Frame = 0


Query: 69  FIADNFSSIDQVTSALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHALSDSPNPYQ 128
           +IAD+FSS+DQV ++LR+ GLESSNLI+GIDFTKSNEWTG+ SFN +SLHA+    NPY+
Sbjct: 13  YIADHFSSLDQVITSLREAGLESSNLILGIDFTKSNEWTGRYSFNRKSLHAIGKRQNPYE 72

Query: 129 KALSIIGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEEVLDCYKNIIPN 188
           KA+SIIG+TL+PFDED LIPCFGFGD TT DQ VFSF+ +N  C G E  +  Y+ I+P+
Sbjct: 73  KAISIIGRTLSPFDEDDLIPCFGFGDVTTRDQYVFSFYPENKSCDGLENAVKRYREIVPH 132

Query: 189 AQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQVTRSSSVGDGELSVQEERTIKAI 248
            +LSGPTS+ PV++AA++IVE++  Q+H+L+I+ADGQVTR+  V  G LS QEE T+ +I
Sbjct: 133 LKLSGPTSFAPVIDAAINIVEQNNMQYHVLVIIADGQVTRNPDVPLGRLSPQEEATMNSI 192

Query: 249 VDASAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNIGVPEKEAAF 308
           + AS YPLSI+LVGVGDGPWD MK+FDD IP R+FDNFQFVNFT+IMS++    +KEAAF
Sbjct: 193 MAASHYPLSIVLVGVGDGPWDTMKQFDDNIPHREFDNFQFVNFTKIMSEHKDAAKKEAAF 252

Query: 309 ALAALMEVPFQYKAVTEMGLIGHVTVKAKHIVPRPPPTRYTRPTRLTSVPSNTSSTSASD 368
           ALAALME+PFQYKA   +      +    H    PPP    R   + SVP+  + T+   
Sbjct: 253 ALAALMEIPFQYKATLSLNRKPVRSSHQHHKPLPPPPEVIERDNAVRSVPNQMTETAEKS 312

Query: 369 EH-----SQVCPICLTAGKDLAFGCGHMTCRECGSRLSNCHICRQPIRNRIRLYT 419
           +        VCPICLT  KD+AF CGH TC+ECG  ++ C +CRQPI  RIRLYT
Sbjct: 313 DRLAPSTVPVCPICLTNPKDMAFSCGHTTCKECGVVITTCPLCRQPITTRIRLYT 367

[Close]

BLAST of IVF0002488 vs. ExPASy Swiss-Prot
Match: Q9SS90 (E3 ubiquitin-protein ligase RGLG1 OS=Arabidopsis thaliana OX=3702 GN=RGLG1 PE=1 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 1.9e-117
Identity = 209/364 (57.42%), Postives = 265/364 (72.80%), Query Frame = 0


Query: 63  FPKKYGFIADNFSSIDQVTSALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHALSD 122
           F ++Y  I+DN+SS+ QV+ AL + GLESSNLIVGIDFTKSNEWTG  SFN +SLH LS+
Sbjct: 126 FDRRYSKISDNYSSLLQVSEALGRAGLESSNLIVGIDFTKSNEWTGAKSFNRKSLHHLSN 185

Query: 123 SPNPYQKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEEVLDCY 182
           +PNPY++A++IIG+TLA FDED LIPC+GFGDA+THDQ VFSF+ +   C+GFEEVL  Y
Sbjct: 186 TPNPYEQAITIIGRTLAAFDEDNLIPCYGFGDASTHDQDVFSFYPEGRFCNGFEEVLARY 245

Query: 183 KNIIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQVTRSSSVGDGELSVQEE 242
           + I+P  +L+GPTS+ P++E AM +VE+S GQ+H+L+I+ADGQVTRS     G LS QE+
Sbjct: 246 REIVPQLKLAGPTSFAPIIEMAMTVVEQSSGQYHVLVIIADGQVTRSVDTEHGRLSPQEQ 305

Query: 243 RTIKAIVDASAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNIGVP 302
           +T+ AIV AS  PLSI+LVGVGDGPWD M++FDD IPAR FDNFQFVNFTEIMSKN    
Sbjct: 306 KTVDAIVKASTLPLSIVLVGVGDGPWDMMQEFDDNIPARAFDNFQFVNFTEIMSKNKDQS 365

Query: 303 EKEAAFALAALMEVPFQYKAVTEMGLIGHVTVKAKHIVPRPPPTRYTRPTRLTSVPS--- 362
            KE  FAL+ALME+P QYKA  E+ L+G         +P PPP +       + +P+   
Sbjct: 366 RKETEFALSALMEIPPQYKATIELNLLGVRNGNIPQRIPLPPPVQSGSSFSSSRIPNFEP 425

Query: 363 ------NTSSTSASDEHSQVCPICLTAGKDLAFGCGHMTCRECGSRLSNCHICRQPIRNR 418
                   S   +S +  Q+CPICL+  K++AFGCGH TC ECG  L  C ICR PI+ R
Sbjct: 426 SVPPYPFESKQMSSADDIQLCPICLSNPKNMAFGCGHQTCCECGPDLKVCPICRAPIQTR 485

[Close]

BLAST of IVF0002488 vs. ExPASy TrEMBL
Match: A0A1S3C2F8 (E3 ubiquitin-protein ligase RGLG2 OS=Cucumis melo OX=3656 GN=LOC103496272 PE=4 SV=1)

HSP 1 Score: 845.9 bits (2184), Expect = 7.3e-242
Identity = 419/419 (100.00%), Postives = 419/419 (100.00%), Query Frame = 0


Query: 1   MPLTWLSNMGNRVSSSAKRSDGGVKGGKTAAVGKEASVQKSDGGGGGSSRGKSLWRPGKK 60
           MPLTWLSNMGNRVSSSAKRSDGGVKGGKTAAVGKEASVQKSDGGGGGSSRGKSLWRPGKK
Sbjct: 1   MPLTWLSNMGNRVSSSAKRSDGGVKGGKTAAVGKEASVQKSDGGGGGSSRGKSLWRPGKK 60

Query: 61  VDFPKKYGFIADNFSSIDQVTSALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHAL 120
           VDFPKKYGFIADNFSSIDQVTSALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHAL
Sbjct: 61  VDFPKKYGFIADNFSSIDQVTSALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHAL 120

Query: 121 SDSPNPYQKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEEVLD 180
           SDSPNPYQKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEEVLD
Sbjct: 121 SDSPNPYQKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEEVLD 180

Query: 181 CYKNIIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQVTRSSSVGDGELSVQ 240
           CYKNIIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQVTRSSSVGDGELSVQ
Sbjct: 181 CYKNIIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQVTRSSSVGDGELSVQ 240

Query: 241 EERTIKAIVDASAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNIG 300
           EERTIKAIVDASAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNIG
Sbjct: 241 EERTIKAIVDASAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNIG 300

Query: 301 VPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTVKAKHIVPRPPPTRYTRPTRLTSVPSN 360
           VPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTVKAKHIVPRPPPTRYTRPTRLTSVPSN
Sbjct: 301 VPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTVKAKHIVPRPPPTRYTRPTRLTSVPSN 360

Query: 361 TSSTSASDEHSQVCPICLTAGKDLAFGCGHMTCRECGSRLSNCHICRQPIRNRIRLYTG 420
           TSSTSASDEHSQVCPICLTAGKDLAFGCGHMTCRECGSRLSNCHICRQPIRNRIRLYTG
Sbjct: 361 TSSTSASDEHSQVCPICLTAGKDLAFGCGHMTCRECGSRLSNCHICRQPIRNRIRLYTG 419

[Close]

BLAST of IVF0002488 vs. ExPASy TrEMBL
Match: A0A0A0KG96 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G135420 PE=4 SV=1)

HSP 1 Score: 788.5 bits (2035), Expect = 1.4e-224
Identity = 391/419 (93.32%), Postives = 401/419 (95.70%), Query Frame = 0


Query: 1   MPLTWLSNMGNRVSSSAKRSDGGVKGGKTAAVGKEASVQKSDGGGGGSSRGKSLWRPGKK 60
           MPLTWLSNMG+RVSSSAKRS+GGVK GKT  VGKEASV+KSD GGGGSSRGKSLWRP  K
Sbjct: 1   MPLTWLSNMGSRVSSSAKRSNGGVKSGKTGGVGKEASVKKSDSGGGGSSRGKSLWRPETK 60

Query: 61  VDFPKKYGFIADNFSSIDQVTSALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHAL 120
           V+FPKKYGFIADNFSS+DQVTSALRKEGLESSNLIVGIDFTKSNEWTG VSFN RSLHAL
Sbjct: 61  VNFPKKYGFIADNFSSVDQVTSALRKEGLESSNLIVGIDFTKSNEWTGAVSFNKRSLHAL 120

Query: 121 SDSPNPYQKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEEVLD 180
           SDSPNPYQKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQ+VFSFHNDNSPCHGFEEVLD
Sbjct: 121 SDSPNPYQKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQLVFSFHNDNSPCHGFEEVLD 180

Query: 181 CYKNIIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQVTRSSSVGDGELSVQ 240
           CYKNIIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQVTRSS   DGELS Q
Sbjct: 181 CYKNIIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQVTRSSLFRDGELSAQ 240

Query: 241 EERTIKAIVDASAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNIG 300
           EE+TIKAIVDASAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNIG
Sbjct: 241 EEKTIKAIVDASAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNIG 300

Query: 301 VPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTVKAKHIVPRPPPTRYTRPTRLTSVPSN 360
           V EKEAAFALAALMEVPFQYKAVTEMGL+G VT KA+HIVPRPPPT YTR TRLTS PS+
Sbjct: 301 VAEKEAAFALAALMEVPFQYKAVTEMGLMGRVTGKARHIVPRPPPTCYTRSTRLTSTPSD 360

Query: 361 TSSTSASDEHSQVCPICLTAGKDLAFGCGHMTCRECGSRLSNCHICRQPIRNRIRLYTG 420
           TSSTSASDEHSQVCPICLTAGKDLAFGCGHMTCRECGSRLSNCHICRQPIRNRIRLYTG
Sbjct: 361 TSSTSASDEHSQVCPICLTAGKDLAFGCGHMTCRECGSRLSNCHICRQPIRNRIRLYTG 419

[Close]

BLAST of IVF0002488 vs. ExPASy TrEMBL
Match: A0A6J1G665 (E3 ubiquitin-protein ligase RGLG4 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451227 PE=4 SV=1)

HSP 1 Score: 678.3 bits (1749), Expect = 2.0e-191
Identity = 352/466 (75.54%), Postives = 371/466 (79.61%), Query Frame = 0


Query: 1   MPLT-WLSNMGNRVSSSAKRSDGGVK------------------GGKTAAVGKEASVQKS 60
           MPLT W SNMG+ VSSS+KRS GG K                  G K A    E SV+ +
Sbjct: 1   MPLTAWFSNMGSLVSSSSKRSGGGEKPAKAASEPSFGGRGGGGGGEKPAKTAAEPSVKST 60

Query: 61  ----------------------------DGGGGGSSRGKSLWRPGKKVDFPKKYGFIADN 120
                                        GGGGG  RGK      KK  F +KYGFIADN
Sbjct: 61  VRRSIGGGGEKPGKMAAQPSVKNMGGGGGGGGGGRGRGKGSRLSEKKASFRQKYGFIADN 120

Query: 121 FSSIDQVTSALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHALSDSPNPYQKALSI 180
           FSSIDQVT ALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLH++SDSPNPY+KALSI
Sbjct: 121 FSSIDQVTEALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHSVSDSPNPYEKALSI 180

Query: 181 IGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEEVLDCYKNIIPNAQLSG 240
           IG+TLAPFD+DGLIPCFGFGDATTHDQ VFSFHNDNSPCHGFEEVLDCYK IIPN QLSG
Sbjct: 181 IGRTLAPFDDDGLIPCFGFGDATTHDQEVFSFHNDNSPCHGFEEVLDCYKRIIPNVQLSG 240

Query: 241 PTSYGPVVEAAMDIVEKSGGQFHILLIVADGQVTRSSSVGDGELSVQEERTIKAIVDASA 300
           PTSY  VVEAAM+IVEKS GQFHILLIVADGQVTR SSVGD ELSVQEE+TIKAIVDASA
Sbjct: 241 PTSYASVVEAAMNIVEKSNGQFHILLIVADGQVTRGSSVGDAELSVQEEKTIKAIVDASA 300

Query: 301 YPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNIGVPEKEAAFALAAL 360
           YPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMS+N+  PEKEAAFALAAL
Sbjct: 301 YPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSRNVATPEKEAAFALAAL 360

Query: 361 MEVPFQYKAVTEMGLIGHVTVKAKHIVPRPPPTRYTRPTRLTSVPSNTSSTSASDEHSQV 420
           MEVP QYKAV EM L+GHVT KAK + PRPPPTRYTRP +LT  PSNT S SASD+ SQV
Sbjct: 361 MEVPLQYKAVKEMDLLGHVTGKAKLVRPRPPPTRYTRPAQLTPKPSNTVSASASDDRSQV 420

[Close]

BLAST of IVF0002488 vs. ExPASy TrEMBL
Match: A0A6J1KZS5 (E3 ubiquitin-protein ligase RGLG4 OS=Cucurbita maxima OX=3661 GN=LOC111499741 PE=4 SV=1)

HSP 1 Score: 673.3 bits (1736), Expect = 6.5e-190
Identity = 352/462 (76.19%), Postives = 372/462 (80.52%), Query Frame = 0


Query: 1   MPLT-WLSNMGNRVSSSAKRSDGGV----------------------KGGKTAA------ 60
           MPLT W SNMG+ +SSS+KRS GG                       K GKTAA      
Sbjct: 1   MPLTAWFSNMGSLISSSSKRSGGGEKPAKAASEPSLKNTESVIGGGDKPGKTAAEPSLKS 60

Query: 61  -------VGKEASVQ-------KSDGGGGGSSRGKSLWRPGKKVDFPKKYGFIADNFSSI 120
                  VG E   +       K+ G GGG  RGK      KK  F +KYGFIADNFSSI
Sbjct: 61  TVRRSIGVGGEKPGKMTTEPSVKNMGSGGGGGRGKGSRLSEKKASFRQKYGFIADNFSSI 120

Query: 121 DQVTSALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHALSDSPNPYQKALSIIGKT 180
           DQVT ALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLH++SDSPNPY+KALSIIG+T
Sbjct: 121 DQVTEALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHSVSDSPNPYEKALSIIGRT 180

Query: 181 LAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEEVLDCYKNIIPNAQLSGPTSY 240
           LAPFD+DGLIPCFGFGDATTHDQ VFSFHNDNSPCHGFEEVLDCYK IIPN QLSGPTSY
Sbjct: 181 LAPFDDDGLIPCFGFGDATTHDQEVFSFHNDNSPCHGFEEVLDCYKRIIPNVQLSGPTSY 240

Query: 241 GPVVEAAMDIVEKSGGQFHILLIVADGQVTRSSSVGDGELSVQEERTIKAIVDASAYPLS 300
             VVEAAM+IVEKS GQFHILLIVADGQVTR SSVGDGELSVQEE+TIKAIVDASAY LS
Sbjct: 241 ASVVEAAMNIVEKSNGQFHILLIVADGQVTRGSSVGDGELSVQEEKTIKAIVDASAYALS 300

Query: 301 IILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNIGVPEKEAAFALAALMEVP 360
           IILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMS+N+  PEKEAAFALAALMEVP
Sbjct: 301 IILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSRNVATPEKEAAFALAALMEVP 360

Query: 361 FQYKAVTEMGLIGHVTVKAKHIVPRPPPTRYTRPTRLTSVPSNTSSTSASDEHSQVCPIC 420
            QYKAV EM L+GHVT KAK + PR PPTR+TRP RLT  PSNT S SASD+ SQVCPIC
Sbjct: 361 LQYKAVKEMDLLGHVTGKAKLVHPRSPPTRHTRPARLTPKPSNTVSASASDDRSQVCPIC 420

[Close]

BLAST of IVF0002488 vs. ExPASy TrEMBL
Match: A0A6J1G650 (E3 ubiquitin-protein ligase RGLG4 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451227 PE=4 SV=1)

HSP 1 Score: 655.6 bits (1690), Expect = 1.4e-184
Identity = 352/517 (68.09%), Postives = 371/517 (71.76%), Query Frame = 0


Query: 1   MPLT-WLSNMGNRVSSSAKRSDGGVK------------------GGKTAAVGKEASVQKS 60
           MPLT W SNMG+ VSSS+KRS GG K                  G K A    E SV+ +
Sbjct: 1   MPLTAWFSNMGSLVSSSSKRSGGGEKPAKAASEPSFGGRGGGGGGEKPAKTAAEPSVKST 60

Query: 61  ----------------------------DGGGGGSSRGKSLWRPGKKVDFPKKYGFIADN 120
                                        GGGGG  RGK      KK  F +KYGFIADN
Sbjct: 61  VRRSIGGGGEKPGKMAAQPSVKNMGGGGGGGGGGRGRGKGSRLSEKKASFRQKYGFIADN 120

Query: 121 FSSIDQVTSALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHALSDSPNPYQKALSI 180
           FSSIDQVT ALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLH++SDSPNPY+KALSI
Sbjct: 121 FSSIDQVTEALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHSVSDSPNPYEKALSI 180

Query: 181 IGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEEVLDCYKNIIPNAQLSG 240
           IG+TLAPFD+DGLIPCFGFGDATTHDQ VFSFHNDNSPCHGFEEVLDCYK IIPN QLSG
Sbjct: 181 IGRTLAPFDDDGLIPCFGFGDATTHDQEVFSFHNDNSPCHGFEEVLDCYKRIIPNVQLSG 240

Query: 241 PTSYGPVVEAAMDIVEKSGGQFHILLIVADGQVTRSSSVGDGELSVQEERTIKAIVDASA 300
           PTSY  VVEAAM+IVEKS GQFHILLIVADGQVTR SSVGD ELSVQEE+TIKAIVDASA
Sbjct: 241 PTSYASVVEAAMNIVEKSNGQFHILLIVADGQVTRGSSVGDAELSVQEEKTIKAIVDASA 300

Query: 301 YPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNIGVPEKEAAFALAAL 360
           YPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMS+N+  PEKEAAFALAAL
Sbjct: 301 YPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSRNVATPEKEAAFALAAL 360

Query: 361 MEVPFQYKAVTEMGLIGHVTVKAKHIVPRPPPTRYTRPTRLTSVPSNTSSTSASDE---- 420
           MEVP QYKAV EM L+GHVT KAK + PRPPPTRYTRP +LT  PSNT S SASD+    
Sbjct: 361 MEVPLQYKAVKEMDLLGHVTGKAKLVRPRPPPTRYTRPAQLTPKPSNTVSASASDDRSQV 420

[Close]

BLAST of IVF0002488 vs. NCBI nr
Match: XP_008456279.1 (PREDICTED: E3 ubiquitin-protein ligase RGLG2 [Cucumis melo])

HSP 1 Score: 842 bits (2174), Expect = 6.20e-308
Identity = 419/419 (100.00%), Postives = 419/419 (100.00%), Query Frame = 0


Query: 1   MPLTWLSNMGNRVSSSAKRSDGGVKGGKTAAVGKEASVQKSDGGGGGSSRGKSLWRPGKK 60
           MPLTWLSNMGNRVSSSAKRSDGGVKGGKTAAVGKEASVQKSDGGGGGSSRGKSLWRPGKK
Sbjct: 1   MPLTWLSNMGNRVSSSAKRSDGGVKGGKTAAVGKEASVQKSDGGGGGSSRGKSLWRPGKK 60

Query: 61  VDFPKKYGFIADNFSSIDQVTSALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHAL 120
           VDFPKKYGFIADNFSSIDQVTSALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHAL
Sbjct: 61  VDFPKKYGFIADNFSSIDQVTSALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHAL 120

Query: 121 SDSPNPYQKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEEVLD 180
           SDSPNPYQKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEEVLD
Sbjct: 121 SDSPNPYQKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEEVLD 180

Query: 181 CYKNIIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQVTRSSSVGDGELSVQ 240
           CYKNIIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQVTRSSSVGDGELSVQ
Sbjct: 181 CYKNIIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQVTRSSSVGDGELSVQ 240

Query: 241 EERTIKAIVDASAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNIG 300
           EERTIKAIVDASAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNIG
Sbjct: 241 EERTIKAIVDASAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNIG 300

Query: 301 VPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTVKAKHIVPRPPPTRYTRPTRLTSVPSN 360
           VPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTVKAKHIVPRPPPTRYTRPTRLTSVPSN
Sbjct: 301 VPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTVKAKHIVPRPPPTRYTRPTRLTSVPSN 360

Query: 361 TSSTSASDEHSQVCPICLTAGKDLAFGCGHMTCRECGSRLSNCHICRQPIRNRIRLYTG 419
           TSSTSASDEHSQVCPICLTAGKDLAFGCGHMTCRECGSRLSNCHICRQPIRNRIRLYTG
Sbjct: 361 TSSTSASDEHSQVCPICLTAGKDLAFGCGHMTCRECGSRLSNCHICRQPIRNRIRLYTG 419

[Close]

BLAST of IVF0002488 vs. NCBI nr
Match: XP_004139915.2 (E3 ubiquitin-protein ligase RGLG4 [Cucumis sativus] >KGN46786.1 hypothetical protein Csa_021092 [Cucumis sativus])

HSP 1 Score: 784 bits (2025), Expect = 3.18e-285
Identity = 391/419 (93.32%), Postives = 401/419 (95.70%), Query Frame = 0


Query: 1   MPLTWLSNMGNRVSSSAKRSDGGVKGGKTAAVGKEASVQKSDGGGGGSSRGKSLWRPGKK 60
           MPLTWLSNMG+RVSSSAKRS+GGVK GKT  VGKEASV+KSD GGGGSSRGKSLWRP  K
Sbjct: 1   MPLTWLSNMGSRVSSSAKRSNGGVKSGKTGGVGKEASVKKSDSGGGGSSRGKSLWRPETK 60

Query: 61  VDFPKKYGFIADNFSSIDQVTSALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHAL 120
           V+FPKKYGFIADNFSS+DQVTSALRKEGLESSNLIVGIDFTKSNEWTG VSFN RSLHAL
Sbjct: 61  VNFPKKYGFIADNFSSVDQVTSALRKEGLESSNLIVGIDFTKSNEWTGAVSFNKRSLHAL 120

Query: 121 SDSPNPYQKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEEVLD 180
           SDSPNPYQKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQ+VFSFHNDNSPCHGFEEVLD
Sbjct: 121 SDSPNPYQKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQLVFSFHNDNSPCHGFEEVLD 180

Query: 181 CYKNIIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQVTRSSSVGDGELSVQ 240
           CYKNIIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQVTRSS   DGELS Q
Sbjct: 181 CYKNIIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQVTRSSLFRDGELSAQ 240

Query: 241 EERTIKAIVDASAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNIG 300
           EE+TIKAIVDASAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNIG
Sbjct: 241 EEKTIKAIVDASAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNIG 300

Query: 301 VPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTVKAKHIVPRPPPTRYTRPTRLTSVPSN 360
           V EKEAAFALAALMEVPFQYKAVTEMGL+G VT KA+HIVPRPPPT YTR TRLTS PS+
Sbjct: 301 VAEKEAAFALAALMEVPFQYKAVTEMGLMGRVTGKARHIVPRPPPTCYTRSTRLTSTPSD 360

Query: 361 TSSTSASDEHSQVCPICLTAGKDLAFGCGHMTCRECGSRLSNCHICRQPIRNRIRLYTG 419
           TSSTSASDEHSQVCPICLTAGKDLAFGCGHMTCRECGSRLSNCHICRQPIRNRIRLYTG
Sbjct: 361 TSSTSASDEHSQVCPICLTAGKDLAFGCGHMTCRECGSRLSNCHICRQPIRNRIRLYTG 419

[Close]

BLAST of IVF0002488 vs. NCBI nr
Match: XP_038901341.1 (E3 ubiquitin-protein ligase RGLG4 [Benincasa hispida])

HSP 1 Score: 735 bits (1897), Expect = 8.39e-266
Identity = 369/414 (89.13%), Postives = 387/414 (93.48%), Query Frame = 0


Query: 9   MGNRVSSSAKRSDGGVKGGKTAAVGKEA-SVQKSDGG--GGGSSRGKSLWRPGKKVDFPK 68
           MG   SSSAKR +GG KGGKTAAV KE  S++K+D G  GGGSSRGKSL RP KKV FPK
Sbjct: 1   MGGWASSSAKRRNGGEKGGKTAAVSKEPPSLKKTDSGSGGGGSSRGKSLCRPEKKVYFPK 60

Query: 69  KYGFIADNFSSIDQVTSALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHALSDSPN 128
           KYGFIADNFSSIDQVT+ALRKEGLESSNLIVG+DFTKSNEWTGKVSFNNRSLHA+SDSPN
Sbjct: 61  KYGFIADNFSSIDQVTAALRKEGLESSNLIVGMDFTKSNEWTGKVSFNNRSLHAVSDSPN 120

Query: 129 PYQKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEEVLDCYKNI 188
           PY+ ALSIIGKTLAPFD+D LIPCFGFGDATTHDQ VF FH+DN+PCHGFEEV+DCYKNI
Sbjct: 121 PYENALSIIGKTLAPFDDDSLIPCFGFGDATTHDQTVFGFHSDNTPCHGFEEVIDCYKNI 180

Query: 189 IPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQVTRSSSVGDGELSVQEERTI 248
           IPN QLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQVTRSSSVGD ELSVQEE+TI
Sbjct: 181 IPNVQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQVTRSSSVGDDELSVQEEKTI 240

Query: 249 KAIVDASAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNIGVPEKE 308
           KAIVDASAYPLSI+LVGVGDGPWD+MKKFDDKIPARDFDNFQFVNFTEIMSKN+G PEKE
Sbjct: 241 KAIVDASAYPLSIVLVGVGDGPWDNMKKFDDKIPARDFDNFQFVNFTEIMSKNLGTPEKE 300

Query: 309 AAFALAALMEVPFQYKAVTEMGLIGHVTVKAKHIVPRPPPTRYTRPTRLTSVPSNTSSTS 368
           AAFALAALMEVPFQYKAVTEMGLIGHVT KAK IVPRPPP RYTRP+RLT +PSNTSS S
Sbjct: 301 AAFALAALMEVPFQYKAVTEMGLIGHVTGKAKRIVPRPPPARYTRPSRLTPIPSNTSSAS 360

Query: 369 ASDEHSQVCPICLTAGKDLAFGCGHMTCRECGSRLSNCHICRQPIRNRIRLYTG 419
           A DEHSQVCPICLTAGKDLAFGCGHMTCRECGSRLSNCHICRQPIRNRIRLYTG
Sbjct: 361 AFDEHSQVCPICLTAGKDLAFGCGHMTCRECGSRLSNCHICRQPIRNRIRLYTG 414

[Close]

BLAST of IVF0002488 vs. NCBI nr
Match: XP_023533277.1 (E3 ubiquitin-protein ligase RGLG4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 683 bits (1762), Expect = 1.61e-244
Identity = 353/459 (76.91%), Postives = 372/459 (81.05%), Query Frame = 0


Query: 1   MPLT-WLSNMGNRVSSSAKRSDGGVKGGKTAA---------------------------- 60
           MPLT W SNMG+ VSSS+KRS GG K  K A+                            
Sbjct: 1   MPLTAWFSNMGSLVSSSSKRSGGGEKPAKAASEPSFGGRGGGGGGEKPGKTAVEPSVKST 60

Query: 61  -----------VGKEASVQKSDGGGGGSSRGKSLWRPGKKVDFPKKYGFIADNFSSIDQV 120
                      +  E SV+   GGGGG  RGK      KK  F +KYGFIADNFSSIDQV
Sbjct: 61  VRRSIGENPGKMAAEPSVKNMGGGGGGGGRGKGSRLSEKKASFRQKYGFIADNFSSIDQV 120

Query: 121 TSALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHALSDSPNPYQKALSIIGKTLAP 180
           T ALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLH++SDSPNPY+KALSIIG+TLAP
Sbjct: 121 TEALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHSVSDSPNPYEKALSIIGRTLAP 180

Query: 181 FDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEEVLDCYKNIIPNAQLSGPTSYGPV 240
           FD+DGLIPCFGFGDATTHDQ VFSFHNDNSPCHGFEEVLDCYK IIPN QLSGPTSY  V
Sbjct: 181 FDDDGLIPCFGFGDATTHDQEVFSFHNDNSPCHGFEEVLDCYKRIIPNVQLSGPTSYASV 240

Query: 241 VEAAMDIVEKSGGQFHILLIVADGQVTRSSSVGDGELSVQEERTIKAIVDASAYPLSIIL 300
           VEAAM+IVEKS GQFHILLIVADGQVTR SSVGDGELSVQEE+TIKAIVDASAYPLSIIL
Sbjct: 241 VEAAMNIVEKSNGQFHILLIVADGQVTRGSSVGDGELSVQEEKTIKAIVDASAYPLSIIL 300

Query: 301 VGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNIGVPEKEAAFALAALMEVPFQY 360
           VGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMS+NI  PEKEAAFALAALMEVP QY
Sbjct: 301 VGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSRNIATPEKEAAFALAALMEVPLQY 360

Query: 361 KAVTEMGLIGHVTVKAKHIVPRPPPTRYTRPTRLTSVPSNTSSTSASDEHSQVCPICLTA 419
           KAV EM L+GHVT KAK + PRPPPTRYTRP +LT  PSNT S SASD+ SQVCPICLT 
Sbjct: 361 KAVKEMNLLGHVTGKAKLVRPRPPPTRYTRPAQLTPKPSNTVSASASDDRSQVCPICLTE 420

[Close]

BLAST of IVF0002488 vs. NCBI nr
Match: XP_022947337.1 (E3 ubiquitin-protein ligase RGLG4 isoform X2 [Cucurbita moschata])

HSP 1 Score: 674 bits (1739), Expect = 6.61e-241
Identity = 352/466 (75.54%), Postives = 371/466 (79.61%), Query Frame = 0


Query: 1   MPLT-WLSNMGNRVSSSAKRSDGGVK------------------GGKTAAVGKEASVQKS 60
           MPLT W SNMG+ VSSS+KRS GG K                  G K A    E SV+ +
Sbjct: 1   MPLTAWFSNMGSLVSSSSKRSGGGEKPAKAASEPSFGGRGGGGGGEKPAKTAAEPSVKST 60

Query: 61  ----------------------------DGGGGGSSRGKSLWRPGKKVDFPKKYGFIADN 120
                                        GGGGG  RGK      KK  F +KYGFIADN
Sbjct: 61  VRRSIGGGGEKPGKMAAQPSVKNMGGGGGGGGGGRGRGKGSRLSEKKASFRQKYGFIADN 120

Query: 121 FSSIDQVTSALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHALSDSPNPYQKALSI 180
           FSSIDQVT ALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLH++SDSPNPY+KALSI
Sbjct: 121 FSSIDQVTEALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHSVSDSPNPYEKALSI 180

Query: 181 IGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEEVLDCYKNIIPNAQLSG 240
           IG+TLAPFD+DGLIPCFGFGDATTHDQ VFSFHNDNSPCHGFEEVLDCYK IIPN QLSG
Sbjct: 181 IGRTLAPFDDDGLIPCFGFGDATTHDQEVFSFHNDNSPCHGFEEVLDCYKRIIPNVQLSG 240

Query: 241 PTSYGPVVEAAMDIVEKSGGQFHILLIVADGQVTRSSSVGDGELSVQEERTIKAIVDASA 300
           PTSY  VVEAAM+IVEKS GQFHILLIVADGQVTR SSVGD ELSVQEE+TIKAIVDASA
Sbjct: 241 PTSYASVVEAAMNIVEKSNGQFHILLIVADGQVTRGSSVGDAELSVQEEKTIKAIVDASA 300

Query: 301 YPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNIGVPEKEAAFALAAL 360
           YPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMS+N+  PEKEAAFALAAL
Sbjct: 301 YPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSRNVATPEKEAAFALAAL 360

Query: 361 MEVPFQYKAVTEMGLIGHVTVKAKHIVPRPPPTRYTRPTRLTSVPSNTSSTSASDEHSQV 419
           MEVP QYKAV EM L+GHVT KAK + PRPPPTRYTRP +LT  PSNT S SASD+ SQV
Sbjct: 361 MEVPLQYKAVKEMDLLGHVTGKAKLVRPRPPPTRYTRPAQLTPKPSNTVSASASDDRSQV 420

[Close]

BLAST of IVF0002488 vs. TAIR 10
Match: AT1G79380.1 (Ca(2)-dependent phospholipid-binding protein (Copine) family )

HSP 1 Score: 504.6 bits (1298), Expect = 7.7e-143
Identity = 241/354 (68.08%), Postives = 289/354 (81.64%), Query Frame = 0


Query: 65  KKYGFIADNFSSIDQVTSALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHALSDSP 124
           KKY  I D FSS+DQV+ ALR+ GLESSNLI+G+DFTKSNEWTGK SF+ + LHAL ++ 
Sbjct: 51  KKYALIPDRFSSLDQVSKALREAGLESSNLILGVDFTKSNEWTGKTSFDGKCLHALGETS 110

Query: 125 NPYQKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEEVLDCYKN 184
           NPY+KA+ +IG+TLAPFDED LIPCFGFGD+TTHD+ VF FH+DNSPCHGFEEVL CYK 
Sbjct: 111 NPYEKAIFVIGQTLAPFDEDNLIPCFGFGDSTTHDEEVFGFHSDNSPCHGFEEVLACYKR 170

Query: 185 IIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQVTRSSSVGDGELSVQEERT 244
           I PN +LSGPTSYGP+++AA+DIVEK+ GQFH+L+IVADGQVTR + + +GELS QE+ T
Sbjct: 171 IAPNLRLSGPTSYGPLIDAAVDIVEKNNGQFHVLVIVADGQVTRGTDMAEGELSQQEKTT 230

Query: 245 IKAIVDASAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNIGVPEK 304
           I AIV+AS+Y LSI+LVGVGDGPW+DM+KFDDKIP R+FDNFQFVNFTEIM++N     K
Sbjct: 231 IDAIVNASSYALSIVLVGVGDGPWEDMRKFDDKIPKREFDNFQFVNFTEIMTRNSPESAK 290

Query: 305 EAAFALAALMEVPFQYKAVTEMGLIGHVTVKAKHIVPRPPPTRYTRPTRLTSVPSNTSST 364
           E AFALAALME+PFQY+A  E+ L+G  T  AK IVPRPPP  YT PT    +PS  S  
Sbjct: 291 ETAFALAALMEIPFQYQAAIELRLLGKQTGLAKTIVPRPPPIPYTPPTN-AELPSTAS-- 350

Query: 365 SASDEHSQVCPICLTAGKDLAFGCGHMTCRECGSRLSNCHICRQPIRNRIRLYT 419
            AS E +Q CPICLT  KD+AF CGHMTC +CGS++SNC ICR  I NR++LYT
Sbjct: 351 PASPEQTQSCPICLTNRKDVAFSCGHMTCGDCGSKISNCPICRVRITNRLKLYT 401

[Close]

BLAST of IVF0002488 vs. TAIR 10
Match: AT1G67800.1 (Copine (Calcium-dependent phospholipid-binding protein) family )

HSP 1 Score: 439.1 bits (1128), Expect = 4.0e-123
Identity = 221/369 (59.89%), Postives = 268/369 (72.63%), Query Frame = 0


Query: 65  KKYGFIADNFSSIDQVTSALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHALSDSP 124
           +KY  IADN+ SID+VT+AL   GLESSNLIVGID TKSNEWTG  SF  +SLH +  +P
Sbjct: 65  RKYSRIADNYRSIDEVTAALSHAGLESSNLIVGIDVTKSNEWTGARSFGRKSLHFIGTTP 124

Query: 125 NPYQKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEEVLDCYKN 184
           NPYQ+A+SIIGKTL+ FDED LIPC+GFGDATTHDQ VFSF+ +++ C+GFEEVL CY+ 
Sbjct: 125 NPYQQAISIIGKTLSVFDEDNLIPCYGFGDATTHDQDVFSFNPNDTYCNGFEEVLMCYRE 184

Query: 185 IIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQVTRSSSVGDGELSVQEERT 244
           I+P  +LSGPTS+ P++E AM IVE+SGGQ+H+LLI+ADGQVTRS    +G  S QE++T
Sbjct: 185 IVPQLRLSGPTSFAPIIERAMTIVEESGGQYHVLLIIADGQVTRSVDTDNGGFSPQEQQT 244

Query: 245 IKAIVDASAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNIGVPEK 304
           I AIV AS YPLSI+LVGVGDGPWD M++FDD IPAR FDNFQFVNFT+IMSKNI    K
Sbjct: 245 IDAIVRASEYPLSIVLVGVGDGPWDTMRQFDDNIPARAFDNFQFVNFTDIMSKNIDPARK 304

Query: 305 EAAFALAALMEVPFQYKAVTEMGLIGHVTVKAKHIVPRPPPTRYT-------RPTRLTS- 364
           EA FAL+ALME+P QYKA  E+GL+G  T      +  PPPT  T       R +R TS 
Sbjct: 305 EAEFALSALMEIPSQYKATLELGLLGQRTGHCPDRIALPPPTYATQSMRNSPRTSRSTSF 364

Query: 365 --------VPSNTSSTSASDEHSQVCPICLTAGKDLAFGCGHMTCRECGSRLSNCHICRQ 418
                   V S   ST+ ++   Q CP+CL + K++AF CGH TC  CG  L  C ICR 
Sbjct: 365 QNKPYDNGVSSTPPSTTHNESQQQFCPVCLVSAKNMAFNCGHQTCAGCGEDLHVCPICRS 424

[Close]

BLAST of IVF0002488 vs. TAIR 10
Match: AT1G67800.3 (Copine (Calcium-dependent phospholipid-binding protein) family )

HSP 1 Score: 439.1 bits (1128), Expect = 4.0e-123
Identity = 221/369 (59.89%), Postives = 268/369 (72.63%), Query Frame = 0


Query: 65  KKYGFIADNFSSIDQVTSALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHALSDSP 124
           +KY  IADN+ SID+VT+AL   GLESSNLIVGID TKSNEWTG  SF  +SLH +  +P
Sbjct: 65  RKYSRIADNYRSIDEVTAALSHAGLESSNLIVGIDVTKSNEWTGARSFGRKSLHFIGTTP 124

Query: 125 NPYQKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEEVLDCYKN 184
           NPYQ+A+SIIGKTL+ FDED LIPC+GFGDATTHDQ VFSF+ +++ C+GFEEVL CY+ 
Sbjct: 125 NPYQQAISIIGKTLSVFDEDNLIPCYGFGDATTHDQDVFSFNPNDTYCNGFEEVLMCYRE 184

Query: 185 IIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQVTRSSSVGDGELSVQEERT 244
           I+P  +LSGPTS+ P++E AM IVE+SGGQ+H+LLI+ADGQVTRS    +G  S QE++T
Sbjct: 185 IVPQLRLSGPTSFAPIIERAMTIVEESGGQYHVLLIIADGQVTRSVDTDNGGFSPQEQQT 244

Query: 245 IKAIVDASAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNIGVPEK 304
           I AIV AS YPLSI+LVGVGDGPWD M++FDD IPAR FDNFQFVNFT+IMSKNI    K
Sbjct: 245 IDAIVRASEYPLSIVLVGVGDGPWDTMRQFDDNIPARAFDNFQFVNFTDIMSKNIDPARK 304

Query: 305 EAAFALAALMEVPFQYKAVTEMGLIGHVTVKAKHIVPRPPPTRYT-------RPTRLTS- 364
           EA FAL+ALME+P QYKA  E+GL+G  T      +  PPPT  T       R +R TS 
Sbjct: 305 EAEFALSALMEIPSQYKATLELGLLGQRTGHCPDRIALPPPTYATQSMRNSPRTSRSTSF 364

Query: 365 --------VPSNTSSTSASDEHSQVCPICLTAGKDLAFGCGHMTCRECGSRLSNCHICRQ 418
                   V S   ST+ ++   Q CP+CL + K++AF CGH TC  CG  L  C ICR 
Sbjct: 365 QNKPYDNGVSSTPPSTTHNESQQQFCPVCLVSAKNMAFNCGHQTCAGCGEDLHVCPICRS 424

[Close]

BLAST of IVF0002488 vs. TAIR 10
Match: AT1G67800.4 (Copine (Calcium-dependent phospholipid-binding protein) family )

HSP 1 Score: 439.1 bits (1128), Expect = 4.0e-123
Identity = 221/369 (59.89%), Postives = 268/369 (72.63%), Query Frame = 0


Query: 65  KKYGFIADNFSSIDQVTSALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRSLHALSDSP 124
           +KY  IADN+ SID+VT+AL   GLESSNLIVGID TKSNEWTG  SF  +SLH +  +P
Sbjct: 65  RKYSRIADNYRSIDEVTAALSHAGLESSNLIVGIDVTKSNEWTGARSFGRKSLHFIGTTP 124

Query: 125 NPYQKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFEEVLDCYKN 184
           NPYQ+A+SIIGKTL+ FDED LIPC+GFGDATTHDQ VFSF+ +++ C+GFEEVL CY+ 
Sbjct: 125 NPYQQAISIIGKTLSVFDEDNLIPCYGFGDATTHDQDVFSFNPNDTYCNGFEEVLMCYRE 184

Query: 185 IIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQVTRSSSVGDGELSVQEERT 244
           I+P  +LSGPTS+ P++E AM IVE+SGGQ+H+LLI+ADGQVTRS    +G  S QE++T
Sbjct: 185 IVPQLRLSGPTSFAPIIERAMTIVEESGGQYHVLLIIADGQVTRSVDTDNGGFSPQEQQT 244

Query: 245 IKAIVDASAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNIGVPEK 304
           I AIV AS YPLSI+LVGVGDGPWD M++FDD IPAR FDNFQFVNFT+IMSKNI    K
Sbjct: 245 IDAIVRASEYPLSIVLVGVGDGPWDTMRQFDDNIPARAFDNFQFVNFTDIMSKNIDPARK 304

Query: 305 EAAFALAALMEVPFQYKAVTEMGLIGHVTVKAKHIVPRPPPTRYT-------RPTRLTS- 364
           EA FAL+ALME+P QYKA  E+GL+G  T      +  PPPT  T       R +R TS 
Sbjct: 305 EAEFALSALMEIPSQYKATLELGLLGQRTGHCPDRIALPPPTYATQSMRNSPRTSRSTSF 364

Query: 365 --------VPSNTSSTSASDEHSQVCPICLTAGKDLAFGCGHMTCRECGSRLSNCHICRQ 418
                   V S   ST+ ++   Q CP+CL + K++AF CGH TC  CG  L  C ICR 
Sbjct: 365 QNKPYDNGVSSTPPSTTHNESQQQFCPVCLVSAKNMAFNCGHQTCAGCGEDLHVCPICRS 424

[Close]

BLAST of IVF0002488 vs. TAIR 10
Match: AT1G67800.2 (Copine (Calcium-dependent phospholipid-binding protein) family )

HSP 1 Score: 435.3 bits (1118), Expect = 5.7e-122
Identity = 234/437 (53.55%), Postives = 291/437 (66.59%), Query Frame = 0


Query: 5   WLSNMGNRVSSSAKRSDGGVKGGKTAAVGKEASVQKSDGG------GGGSSRGKSLWRPG 64
           WLS MG   S  + R  G  +  + +  G  +     D           S+   S +  G
Sbjct: 17  WLSWMGGSSSKESPRGGGSGRRYERSVSGSSSYSSAWDQSSYYQTPNHPSASPVSSYNSG 76

Query: 65  KKV--DFPKKYGFIADNFSSIDQVTSALRKEGLESSNLIVGIDFTKSNEWTGKVSFNNRS 124
           ++   +  +KY  IADN+ SID+VT+AL   GLESSNLIVGID TKSNEWTG  SF  +S
Sbjct: 77  RQTPKNLERKYSRIADNYRSIDEVTAALSHAGLESSNLIVGIDVTKSNEWTGARSFGRKS 136

Query: 125 LHALSDSPNPYQKALSIIGKTLAPFDEDGLIPCFGFGDATTHDQMVFSFHNDNSPCHGFE 184
           LH +  +PNPYQ+A+SIIGKTL+ FDED LIPC+GFGDATTHDQ VFSF+ +++ C+GFE
Sbjct: 137 LHFIGTTPNPYQQAISIIGKTLSVFDEDNLIPCYGFGDATTHDQDVFSFNPNDTYCNGFE 196

Query: 185 EVLDCYKNIIPNAQLSGPTSYGPVVEAAMDIVEKSGGQFHILLIVADGQVTRSSSVGDGE 244
           EVL CY+ I+P  +LSGPTS+ P++E AM IVE+SGGQ+H+LLI+ADGQVTRS    +G 
Sbjct: 197 EVLMCYREIVPQLRLSGPTSFAPIIERAMTIVEESGGQYHVLLIIADGQVTRSVDTDNGG 256

Query: 245 LSVQEERTIKAIVDASAYPLSIILVGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMS 304
            S QE++TI AIV AS YPLSI+LVGVGDGPWD M++FDD IPAR FDNFQFVNFT+IMS
Sbjct: 257 FSPQEQQTIDAIVRASEYPLSIVLVGVGDGPWDTMRQFDDNIPARAFDNFQFVNFTDIMS 316

Query: 305 KNIGVPEKEAAFALAALMEVPFQYKAVTEMGLIGHVTVKAKHIVPRPPPTRYT------- 364
           KNI    KEA FAL+ALME+P QYKA  E+GL+G  T      +  PPPT  T       
Sbjct: 317 KNIDPARKEAEFALSALMEIPSQYKATLELGLLGQRTGHCPDRIALPPPTYATQSMRNSP 376

Query: 365 RPTRLTS---------VPSNTSSTSASDEHSQVCPICLTAGKDLAFGCGHMTCRECGSRL 418
           R +R TS         V S   ST+ ++   Q CP+CL + K++AF CGH TC  CG  L
Sbjct: 377 RTSRSTSFQNKPYDNGVSSTPPSTTHNESQQQFCPVCLVSAKNMAFNCGHQTCAGCGEDL 436

The following BLAST results are available for this feature:

BLAST of IVF0002488 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SAL0	1.1e-141	68.08	E3 ubiquitin-protein ligase RGLG4 OS=Arabidopsis thaliana OX=3702 GN=RGLG4 PE=1 ...	[more]
Q8LB88	5.6e-122	59.89	E3 ubiquitin-protein ligase RGLG5 OS=Arabidopsis thaliana OX=3702 GN=RGLG5 PE=1 ...	[more]
Q9LY87	1.5e-119	57.52	E3 ubiquitin-protein ligase RGLG2 OS=Arabidopsis thaliana OX=3702 GN=RGLG2 PE=1 ...	[more]
Q8RX26	8.3e-118	58.31	E3 ubiquitin-protein ligase RGLG3 OS=Arabidopsis thaliana OX=3702 GN=RGLG3 PE=1 ...	[more]
Q9SS90	1.9e-117	57.42	E3 ubiquitin-protein ligase RGLG1 OS=Arabidopsis thaliana OX=3702 GN=RGLG1 PE=1 ...	[more]

BLAST of IVF0002488 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C2F8	7.3e-242	100.00	E3 ubiquitin-protein ligase RGLG2 OS=Cucumis melo OX=3656 GN=LOC103496272 PE=4 S...	[more]
A0A0A0KG96	1.4e-224	93.32	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G135420 P...	[more]
A0A6J1G665	2.0e-191	75.54	E3 ubiquitin-protein ligase RGLG4 isoform X2 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1KZS5	6.5e-190	76.19	E3 ubiquitin-protein ligase RGLG4 OS=Cucurbita maxima OX=3661 GN=LOC111499741 PE...	[more]
A0A6J1G650	1.4e-184	68.09	E3 ubiquitin-protein ligase RGLG4 isoform X1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of IVF0002488 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456279.1	6.20e-308	100.00	PREDICTED: E3 ubiquitin-protein ligase RGLG2 [Cucumis melo]	[more]
XP_004139915.2	3.18e-285	93.32	E3 ubiquitin-protein ligase RGLG4 [Cucumis sativus] >KGN46786.1 hypothetical pro...	[more]
XP_038901341.1	8.39e-266	89.13	E3 ubiquitin-protein ligase RGLG4 [Benincasa hispida]	[more]
XP_023533277.1	1.61e-244	76.91	E3 ubiquitin-protein ligase RGLG4 [Cucurbita pepo subsp. pepo]	[more]
XP_022947337.1	6.61e-241	75.54	E3 ubiquitin-protein ligase RGLG4 isoform X2 [Cucurbita moschata]	[more]

BLAST of IVF0002488 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G79380.1	7.7e-143	68.08	Ca(2)-dependent phospholipid-binding protein (Copine) family	[more]
AT1G67800.1	4.0e-123	59.89	Copine (Calcium-dependent phospholipid-binding protein) family	[more]
AT1G67800.3	4.0e-123	59.89	Copine (Calcium-dependent phospholipid-binding protein) family	[more]
AT1G67800.4	4.0e-123	59.89	Copine (Calcium-dependent phospholipid-binding protein) family	[more]
AT1G67800.2	5.7e-122	53.55	Copine (Calcium-dependent phospholipid-binding protein) family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002035	von Willebrand factor, type A	SMART	SM00327	VWA_4	coord: 91..294 e-value: 2.5E-5 score: 33.7
IPR010734	Copine, C-terminal	PFAM	PF07002	Copine	coord: 116..329 e-value: 8.1E-73 score: 244.5
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 355..418 e-value: 2.4E-12 score: 48.1
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 372..411 e-value: 4.4E-8 score: 32.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 340..368
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 349..368
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	PANTHER	PTHR45751:SF16	E3 UBIQUITIN-PROTEIN LIGASE RGLG4	coord: 52..418
None	No IPR available	PANTHER	PTHR45751	COPINE FAMILY PROTEIN 1	coord: 52..418
None	No IPR available	CDD	cd16729	RING-HC_RGLG_plant	coord: 373..417 e-value: 8.99112E-22 score: 85.5683
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 370..414
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 374..407 score: 9.89275
IPR036465	von Willebrand factor A-like domain superfamily	SUPERFAMILY	53300	vWA-like	coord: 93..274

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0002488.4	IVF0002488.4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0009867	jasmonic acid mediated signaling pathway
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0009611	response to wounding
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016020	membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0004842	ubiquitin-protein transferase activity