IVF0002442 (gene) Melon (IVF77) v1

Overview


Name	IVF0002442
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Cytoplasmic tRNA 2-thiolation protein 1
Location	chr03: 22744442 .. 22748756 (-)
RNA-Seq Expression	IVF0002442
Synteny	IVF0002442

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTCAAGTGTCACCCAGTACCCACCCTCTGTGCCTTTGTGGCCTTTGGCCTTTTCCTTCCCTTCCGGCTTCCACCGAATTTTACGGTTCGTAGTCGAACTGAGTTTCCCATCACCTTGCACCTACCAGGAAGCCAATCAAACTGACAATGGAGGAAGCCGGTCCCAAACCCAAGAGGCCCGTCTCGTCCCTTTGTTGTTTATGCAACAACAGGAAAGCTGCTCTCAAGAGGCCCAAAACCCTCCAACAGGTTTTTTTTCCTTCCACTCTTATTTCTTTCTCTCTCAGTTTTCCTCATAACTTGCGTTAATCATGCTCCGAAATCGCTTCGTGAAGATTGTCGAGATACTTCTTATTCATTTATCTTAATTACTTGGCTCCATTCAGATGTAAATTTGATGTCAATGTGATTGCCAAGGGCAGAATTCCCTGTTTTTCCTTCTTCAGTTTGTTACCTTTGAACCCAATGAGGTTATATTGATGGGTTTTATATATATACTTTAGTAGTCTTCCTCAATCGTAGATTCACAAATTTGCAACAAGCTTAGCAAGTGATTGTCAATATTAATCGGGGAGGAAATAATTCTAGAGGGGTTCCAAATTTTCACTTGATGGGTTTGATATATCAAATACTTTAACAGAGTTCAAGGAGGATATTGTGTATCAAGGTGTCTATTGCTTTTACAGATATGCAGAGAATGTTTCTATGAGGTCTTTGAGGAGGAGATTCATCAAGTTATTGTGAAGAATCAGTTGTTCAGACCTGGGGAACGCATTGCTGTTGGTGCATCTGGTGGAAAAGGTGAACACTGATTCTTCCTAGTTCTAAATCATCTTTAGTCTTTAAGATTGTGTGAAAATATATTAGCTTGTAAATTACATTGTCTTCCCACTTTATGCAGATTCAACCGTTCTTGCTTATGTGTTATCAGAACTGAATCAGCGGCACAATTATGGTTTAGATCTCTTTCTTTTATCAGTTGATGAGGGCATCACTGGATACAGAGATGACTCCCTTGAAACTGTGAAAAGAAATGAAATTCAGGTGAATCAAATAATTTCTACACGGTTACACTTTGAAAACTTCCATTCTCACCTTAATTTTCCTGTTTTCAGTATGGATTGCCACTACAAATTGTATCATACAAGGATTTATATGGATGGACAATGGACGAGATAGTGAAAATGATCGGTTTGAAGAATAATTGCACCTTTTGTGGAGTTTTCCGTCGACAGGTGTGAAACAACTCCTGCTATTACAGTAGTATTTGCATGGATTTTATTTTTCTGCTCTTTAAAGGAAAAGGTTTCAAACCATTTGTTCCACTTTATTGCTAAAAGTAGTTGTTAGTCATTATTTTATATGGACCACTTCAAATTGGGAAAATGGTGCTTCTTCCTTGGGTACAGACCTACAGTAGTAAATGCCCTTTGAGGCTTATTTTTATCCTATGAAACGAAATAGTGTTTAATTTAGGATATGGTGTTGATACTACCACTGAAAAAAATGCCCAGGTGATGGTGGCATTCTACTGCTGAGCAGTGTTTAACTTTGTTCTGTTTGATTGGTGGTTATTGAAGGGACTCGATTATTTTTTTTTTTTTAATGTTGCTTTTTCAAGGTTTCAATGTATTTTCAAGACAAGCATCGGCCTTTGCTTGTCTGATTTGAAGTTTCCAGATTTAAAGCTTCTTTTTCTTGGTGTCTCTCTCACTTCTATTTGAAGAATTTTCTGACTTATGCTTAACCGGAATTGTATTTATTCTAGTTTATGTATCTTATTGATCTATGTATTACTATAAGCATACTTGGCAAGTGGTTCATTTCCTTGTATATTTTGAACATTAGTTTCTTTTCATTTATTCAATAAAAAGTTGTCTCTTTTTTTATATAAAAAATATGTCTAGAGTCATAATTGGTTGAGGTGTGTATTAAGCGTGGTTGCATTGTATTGATGGAGTTTTTTCTCCTGAAGGCTCTTGATAGAGGTGCTGCATGGTTGAAAGTAGACAAGCTTGCCACAGGGCACAATGCAGATGATATGGCTGAAACAGTTCTATTAAATATATTACGAGGTGATATTGCAAGGTATTTTAATGGTAACACTTCTTTTTTGCCGATTACTTTTGTCCCTCATTTGGGCTGCGTTAGACTGAAGTGATACTTTGTATTTGTAGATTGAGTAGATGTACTGCAATAATTACTGGTGAAGATGGACCAATTCCAAGATGCAAACCTTTCAAATACACATATGAAAAGGAGATCGTAATATATCCTTATATTGTAGTCTCATAGTTCTAGAGCAAGTCTTGCATCATGCAATTTGATTATTGGTTGATGCTAGTTGTAAACCTTAACCATAGATGTTCACGTATGCTTACTTTAAGAAGCTGGACTACTTCTCCACCGAGTGTAAGTTCTTTTTCTTTAGTTGTCTTTTTTGTTTTTTTATTTTCCAGTCTTCTGTGTCTTACTAATTGATAATAAATACAAGTTTATTATATGCATTTTCCGTCCTACTAGGCATAATTAACTTTGACATTTGATAGATTGAATGTTAAGTTGCGATGGGTCAAAAATACATGCTCGAGCATGATTCATCAATTGTAGGTTCCAAAACTAGTTTTGTCTACAACGACTTTTCATTGTTCTAAAGTAATCATTTGCTTCTACAGTGTGTTATTGTCTGAAGAGATATTTTGTTGTCATAATAACTCCAAATATTTCAGCTTCAGACTTTGTATATATCTCCTTATCCAATTGGAATTGTTGCATTCTTGTTATGCTTGAACTTATAATGTTCTTACAAAATGTTCAAGTATTCTCATATCTTATCCCACACTCTTGAAATTTGGCTTGACTTTGTTCATTTCCACGCATGTTTTTTGAAATTGCAGGCATTTATTCTCCCAATGCTTATCGTGGTTTTGCTCGTGAATTTATTAAGGATTTGGAACGAATCAGGTTTCAACTCACTTTGTCTTTGCTTGACAAAAATTAGCCTTCTCCAGACAAAGATTGTATTCCCTCTGATTTACTCTTACTAAGCTTGTTGTATTGTGAACACTAATGCAGACCTAGGGCCATTCTTGACATCATTAAATCTGGCGAGGATTTCAGGATTTCCACTTCAACAAAAATGCCTGAGCAAGGGACGTGTGAACGATGTGGCTACATTTCAAGCCAGGTGTGCTCTGCTTTTGTTTTACCTGATAAGAATCCGAAATTGCCCATATGGACTGGGATTATTATGCATTCGTAATAGATGTTCCCAGCCTGATTTGAGCTAATATCATCATCTGAATCTGGTCATATATCTTACATCCAGAATTCGGTTGTTTGTAGATTATATAGTTCCTCTAGATCTTGAAGTATTTTTCTTCTTTCTCGATTGTCACCCCCCCCCCCCCCCCCCCCCCACACACACACACACACATTTTACGAAGCTGCTTAACTAGTTTTGGATGCGACCTACTGTCAAATGACATTAGGAAGTTGTTGAATTTTCTGTCATTCTATTTCTTTTACAACCGGTCGCCTAGAATACGTCTTCCAGCTACATCATGTACATCTGCAAGAAAGCTCTCACAGCTCATTTTGCCATTCATATCTAAGTTTCTTAAATTTTACTCAAGTACAATCGGATATCTGAGCATTTGTTTATCTCCCATTTACTTAATGTAGAAATGGTGTAAAGCTTGTGTTCTGCTCGAGGGCCTAAACCGAGGTTTACCAAAGCTGGGTATTGGGCGCAGTCGGGGGCTTGATAGCGAGGGGAAGAAGGAAACCATTGGAAGTAATAATGTACATACGAGAAGCATTGAGAGCAAACAATGTGGCTCTTTAGATTTCTGAAGCTTCTTTGTTTGATGGTCAAGGAGTAATCTAAGAATCAGTCATTCTTCACTGTTTGTGATTGAAGAAAAAAGGCAAATGGAGAAAACGAAATAGATCATGATTCAACATATCTGATTTGACACCATCAATACAAACAATGAAATCCACTGGAAAACTACAAGCGTCCATGTAGCAGGTAATAACCTCATTGTAAAACATAATTTTAATATCTATCCTCTTATATTTTGAATTTGATTTCAATTTTGTTCAATCATTTAGATTTGAATTTTAGGTTAATTTAGTCTCTAAATTTCAAGATTTTACCATTCAAACACAGTGTAAAACACCACAAACATGACCTGACCAAGAGCTGGTTGGCGACAGTGATGTGTGCAAATCTCGAGTGGGGTTTGAATTTCATTGAGAAAAATGAAATAAATTAAAAATACTACTATATGAGAAGTGGTTTTGTTTTAA

mRNA sequence

CTCTCAAGTGTCACCCAGTACCCACCCTCTGTGCCTTTGTGGCCTTTGGCCTTTTCCTTCCCTTCCGGCTTCCACCGAATTTTACGGTTCGTAGTCGAACTGAGTTTCCCATCACCTTGCACCTACCAGGAAGCCAATCAAACTGACAATGGAGGAAGCCGGTCCCAAACCCAAGAGGCCCGTCTCGTCCCTTTGTTGTTTATGCAACAACAGGAAAGCTGCTCTCAAGAGGCCCAAAACCCTCCAACAGATATGCAGAGAATGTTTCTATGAGGTCTTTGAGGAGGAGATTCATCAAGTTATTGTGAAGAATCAGTTGTTCAGACCTGGGGAACGCATTGCTGTTGGTGCATCTGGTGGAAAAGATTCAACCGTTCTTGCTTATGTGTTATCAGAACTGAATCAGCGGCACAATTATGGTTTAGATCTCTTTCTTTTATCAGTTGATGAGGGCATCACTGGATACAGAGATGACTCCCTTGAAACTGTGAAAAGAAATGAAATTCAGTATGGATTGCCACTACAAATTGTATCATACAAGGATTTATATGGATGGACAATGGACGAGATAGTGAAAATGATCGGTTTGAAGAATAATTGCACCTTTTGTGGAGTTTTCCGTCGACAGGCTCTTGATAGAGGTGCTGCATGGTTGAAAGTAGACAAGCTTGCCACAGGGCACAATGCAGATGATATGGCTGAAACAGTTCTATTAAATATATTACGAGGTGATATTGCAAGATTGAGTAGATGTACTGCAATAATTACTGGTGAAGATGGACCAATTCCAAGATGCAAACCTTTCAAATACACATATGAAAAGGAGATCGTAATTTTAAGAAGCTGGACTACTTCTCCACCGAGTGCATTTATTCTCCCAATGCTTATCGTGGTTTTGCTCGTGAATTTATTAAGGATTTGGAACGAATCAGACCTAGGGCCATTCTTGACATCATTAAATCTGGCGAGGATTTCAGGATTTCCACTTCAACAAAAATGCCTGAGCAAGGGACGTGTGAACGATGTGGCTACATTTCAAGCCAGAAATGGTGTAAAGCTTGTGTTCTGCTCGAGGGCCTAAACCGAGGTTTACCAAAGCTGGGTATTGGGCGCAGTCGGGGGCTTGATAGCGAGGGGAAGAAGGAAACCATTGGAAGTAATAATGTACATACGAGAAGCATTGAGAGCAAACAATGTGGCTCTTTAGATTTCTGAAGCTTCTTTGTTTGATGGTCAAGGAGTAATCTAAGAATCAGTCATTCTTCACTGTTTGTGATTGAAGAAAAAAGGCAAATGGAGAAAACGAAATAGATCATGATTCAACATATCTGATTTGACACCATCAATACAAACAATGAAATCCACTGGAAAACTACAAGCGTCCATGTAGCAGGTAATAACCTCATTGTAAAACATAATTTTAATATCTATCCTCTTATATTTTGAATTTGATTTCAATTTTGTTCAATCATTTAGATTTGAATTTTAGGTTAATTTAGTCTCTAAATTTCAAGATTTTACCATTCAAACACAGTGTAAAACACCACAAACATGACCTGACCAAGAGCTGGTTGGCGACAGTGATGTGTGCAAATCTCGAGTGGGGTTTGAATTTCATTGAGAAAAATGAAATAAATTAAAAATACTACTATATGAGAAGTGGTTTTGTTTTAA

Coding sequence (CDS)

ATGGAGGAAGCCGGTCCCAAACCCAAGAGGCCCGTCTCGTCCCTTTGTTGTTTATGCAACAACAGGAAAGCTGCTCTCAAGAGGCCCAAAACCCTCCAACAGATATGCAGAGAATGTTTCTATGAGGTCTTTGAGGAGGAGATTCATCAAGTTATTGTGAAGAATCAGTTGTTCAGACCTGGGGAACGCATTGCTGTTGGTGCATCTGGTGGAAAAGATTCAACCGTTCTTGCTTATGTGTTATCAGAACTGAATCAGCGGCACAATTATGGTTTAGATCTCTTTCTTTTATCAGTTGATGAGGGCATCACTGGATACAGAGATGACTCCCTTGAAACTGTGAAAAGAAATGAAATTCAGTATGGATTGCCACTACAAATTGTATCATACAAGGATTTATATGGATGGACAATGGACGAGATAGTGAAAATGATCGGTTTGAAGAATAATTGCACCTTTTGTGGAGTTTTCCGTCGACAGGCTCTTGATAGAGGTGCTGCATGGTTGAAAGTAGACAAGCTTGCCACAGGGCACAATGCAGATGATATGGCTGAAACAGTTCTATTAAATATATTACGAGGTGATATTGCAAGATTGAGTAGATGTACTGCAATAATTACTGGTGAAGATGGACCAATTCCAAGATGCAAACCTTTCAAATACACATATGAAAAGGAGATCGTAATTTTAAGAAGCTGGACTACTTCTCCACCGAGTGCATTTATTCTCCCAATGCTTATCGTGGTTTTGCTCGTGAATTTATTAAGGATTTGGAACGAATCAGACCTAGGGCCATTCTTGACATCATTAAATCTGGCGAGGATTTCAGGATTTCCACTTCAACAAAAATGCCTGAGCAAGGGACGTGTGAACGATGTGGCTACATTTCAAGCCAGAAATGGTGTAAAGCTTGTGTTCTGCTCGAGGGCCTAA

Protein sequence

MEEAGPKPKRPVSSLCCLCNNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNQLFRPGERIAVGASGGKDSTVLAYVLSELNQRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQYGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAAWLKVDKLATGHNADDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIVILRSWTTSPPSAFILPMLIVVLLVNLLRIWNESDLGPFLTSLNLARISGFPLQQKCLSKGRVNDVATFQARNGVKLVFCSRA

Homology

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BLAST of IVF0002442 vs. ExPASy Swiss-Prot
Match: O64862 (Cytoplasmic tRNA 2-thiolation protein 1 OS=Arabidopsis thaliana OX=3702 GN=NCS6 PE=2 SV=2)

HSP 1 Score: 413.7 bits (1062), Expect = 1.9e-114
Identity = 198/224 (88.39%), Postives = 214/224 (95.54%), Query Frame = 0


Query: 7   KPKRPVSS-LCCLCNNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNQLFRPGERIA 66
           K K+ V+S LCCLCN R+  LKRPKTLQQICRECFYEVFEEEIHQVIV+N+LF+ GER+A
Sbjct: 4   KNKKAVASRLCCLCNLRRPVLKRPKTLQQICRECFYEVFEEEIHQVIVQNRLFKSGERVA 63

Query: 67  VGASGGKDSTVLAYVLSELNQRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQYGLPL 126
           +GASGGKDSTVLAYVLSELN+RHNYGLDLFLLS+DEGITGYRDDSLETVKRNE+QYGLPL
Sbjct: 64  IGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSIDEGITGYRDDSLETVKRNEVQYGLPL 123

Query: 127 QIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAAWLKVDKLATGHNADDMAE 186
           +IVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAA LKV+KL TGHNADD+AE
Sbjct: 124 KIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVEKLVTGHNADDIAE 183

Query: 187 TVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIVI 230
           TVLLNILRGDIARLSRCT+I TGEDGPIPRCKPFKYTYEKEIV+
Sbjct: 184 TVLLNILRGDIARLSRCTSITTGEDGPIPRCKPFKYTYEKEIVM 227

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BLAST of IVF0002442 vs. ExPASy Swiss-Prot
Match: Q6Z6G6 (Cytoplasmic tRNA 2-thiolation protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=NCS6 PE=2 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 4.7e-110
Identity = 193/227 (85.02%), Postives = 206/227 (90.75%), Query Frame = 0


Query: 5   GPK--PKRPVSSLCCLCNNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNQLFRPGE 64
           GP+  P R  S LC  C  RKAALKRPKTL+QICRECFY VFE+EIHQ IV N LF+PG+
Sbjct: 7   GPRQPPARAGSRLCTRCGERKAALKRPKTLEQICRECFYVVFEDEIHQTIVDNNLFKPGD 66

Query: 65  RIAVGASGGKDSTVLAYVLSELNQRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQYG 124
           R+A+GASGGKDSTVLAYVLSELN+RH Y LDLFLLSVDEGITGYRDDSLETVKRNEIQYG
Sbjct: 67  RVAIGASGGKDSTVLAYVLSELNRRHKYCLDLFLLSVDEGITGYRDDSLETVKRNEIQYG 126

Query: 125 LPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAAWLKVDKLATGHNADD 184
           LPL+IVSYKDLYGWTMD+IVK IGLKNNCTFCGVFRRQALDRGAA LKVDK+ TGHNADD
Sbjct: 127 LPLKIVSYKDLYGWTMDDIVKAIGLKNNCTFCGVFRRQALDRGAALLKVDKIVTGHNADD 186

Query: 185 MAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIVI 230
           +AETVLLNILRGDIARLSRCT I TGEDGPIPRCKPFKYTYEKEIV+
Sbjct: 187 IAETVLLNILRGDIARLSRCTFITTGEDGPIPRCKPFKYTYEKEIVM 233

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BLAST of IVF0002442 vs. ExPASy Swiss-Prot
Match: A8JF71 (Cytoplasmic tRNA 2-thiolation protein 1 OS=Chlamydomonas reinhardtii OX=3055 GN=NCS6 PE=3 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 1.2e-94
Identity = 160/215 (74.42%), Postives = 184/215 (85.58%), Query Frame = 0


Query: 15  LCCLCNNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNQLFRPGERIAVGASGGKDS 74
           LC  CN  +A L RPKT +Q+CRECF+  FEEE+HQ IV N+LF+ GER+AV ASGGKDS
Sbjct: 5   LCVRCNTSRAMLNRPKTQEQVCRECFFTAFEEEVHQTIVDNKLFKHGERLAVAASGGKDS 64

Query: 75  TVLAYVLSELNQRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQYGLPLQIVSYKDLY 134
           TVLA+++S LN R+NYGLDLFLLS+DEGITGYRDDSLETVKRNE QYG+PL++VSYK+LY
Sbjct: 65  TVLAHIMSTLNARYNYGLDLFLLSIDEGITGYRDDSLETVKRNEQQYGIPLKVVSYKELY 124

Query: 135 GWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAAWLKVDKLATGHNADDMAETVLLNILRG 194
           GWTMDEIV  IG KNNCTFCGVFRRQALDRGA  +  +K+ATGHNADD+AETVLLNILRG
Sbjct: 125 GWTMDEIVSQIGTKNNCTFCGVFRRQALDRGAVLMGANKIATGHNADDVAETVLLNILRG 184

Query: 195 DIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIVI 230
           D+ RL RC  IITGED  +PR KPFKY YEKEIV+
Sbjct: 185 DVPRLGRCANIITGEDSSLPRVKPFKYAYEKEIVL 219

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BLAST of IVF0002442 vs. ExPASy Swiss-Prot
Match: Q94480 (Cytoplasmic tRNA 2-thiolation protein 1 OS=Dictyostelium discoideum OX=44689 GN=ctu1 PE=2 SV=2)

HSP 1 Score: 334.7 bits (857), Expect = 1.1e-90
Identity = 156/229 (68.12%), Postives = 189/229 (82.53%), Query Frame = 0


Query: 1   MEEAGPKPKRPVSSLCCLCNNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNQLFRP 60
           ME    K K   S LC +CN  +  LKRPKT + IC+ECFY VFE+EIH  I+ N LF+ 
Sbjct: 1   MENTATKKK---SKLCEVCNVSRPVLKRPKTGEMICKECFYTVFEDEIHHTIISNNLFKR 60

Query: 61  GERIAVGASGGKDSTVLAYVLSELNQRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120
           G+R+A+GASGGKDSTVLA +++ LN++++YGLDLFLLS+DEGITGYRDDSLETVKRN+ Q
Sbjct: 61  GDRVAIGASGGKDSTVLAEIMTLLNKKYDYGLDLFLLSIDEGITGYRDDSLETVKRNQEQ 120

Query: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAAWLKVDKLATGHNA 180
           Y +PL+I+SYK+LY WTMD+IVK IGLK NCTFCGVFRRQALDRGA  LK +K+ TGHNA
Sbjct: 121 YQIPLKILSYKELYNWTMDDIVKEIGLKGNCTFCGVFRRQALDRGAVMLKANKIVTGHNA 180

Query: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIVI 230
           DD+AETVL+N+LRGDI RL RC  IITG +G +PR KPFKYTY+KEIV+
Sbjct: 181 DDIAETVLMNLLRGDIPRLQRCVNIITGSEGALPRSKPFKYTYQKEIVM 226

[Close]

BLAST of IVF0002442 vs. ExPASy Swiss-Prot
Match: Q5FW05 (Cytoplasmic tRNA 2-thiolation protein 1 OS=Xenopus tropicalis OX=8364 GN=ctu1 PE=2 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 4.2e-90
Identity = 152/214 (71.03%), Postives = 180/214 (84.11%), Query Frame = 0


Query: 16  CCLCNNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNQLFRPGERIAVGASGGKDST 75
           C  C  R+A L+RPKT   +C++CF+  FEEEIH  IV  +LF PGE++ +GASGGKDST
Sbjct: 5   CSSCEERRAVLRRPKTGHSLCKDCFFHAFEEEIHHTIVSAKLFNPGEKVGIGASGGKDST 64

Query: 76  VLAYVLSELNQRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQYGLPLQIVSYKDLYG 135
           VLA+VL  LN+R+ YGLDL L+SVDEGI+GYRDDSLETVKRN+ QY LPL+IVSY++LYG
Sbjct: 65  VLAHVLKVLNERYAYGLDLILVSVDEGISGYRDDSLETVKRNQQQYELPLKIVSYQELYG 124

Query: 136 WTMDEIVKMIGLKNNCTFCGVFRRQALDRGAAWLKVDKLATGHNADDMAETVLLNILRGD 195
           WTMD+IVK +GLKNNCTFCGVFRRQALDRGA  L V+K+ TGHNADD+AETVL+N LRGD
Sbjct: 125 WTMDQIVKQVGLKNNCTFCGVFRRQALDRGAMMLGVNKICTGHNADDIAETVLMNFLRGD 184

Query: 196 IARLSRCTAIITGEDGPIPRCKPFKYTYEKEIVI 230
           IARL RCT+I TG +G IPRCKP KY YEKEIV+
Sbjct: 185 IARLRRCTSITTGSEGAIPRCKPLKYAYEKEIVL 218

[Close]

BLAST of IVF0002442 vs. ExPASy TrEMBL
Match: A0A1S3BD41 (Cytoplasmic tRNA 2-thiolation protein 1 OS=Cucumis melo OX=3656 GN=LOC103488373 PE=3 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 1.2e-129
Identity = 228/229 (99.56%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MEEAGPKPKRPVSSLCCLCNNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNQLFRP 60
           MEEAGPKPKRPVSSLCCLCNNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNQLFRP
Sbjct: 1   MEEAGPKPKRPVSSLCCLCNNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNQLFRP 60

Query: 61  GERIAVGASGGKDSTVLAYVLSELNQRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120
           GERIAVGASGGKDSTVLAYVLSELNQRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ
Sbjct: 61  GERIAVGASGGKDSTVLAYVLSELNQRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120

Query: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAAWLKVDKLATGHNA 180
           YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAAWLKVDKLATGHNA
Sbjct: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAAWLKVDKLATGHNA 180

Query: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIVI 230
           DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIV+
Sbjct: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIVM 229

[Close]

BLAST of IVF0002442 vs. ExPASy TrEMBL
Match: A0A0A0LKF0 (Cytoplasmic tRNA 2-thiolation protein 1 OS=Cucumis sativus OX=3659 GN=NCS6 PE=3 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 1.7e-126
Identity = 225/229 (98.25%), Postives = 226/229 (98.69%), Query Frame = 0


Query: 1   MEEAGPKPKRPVSSLCCLCNNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNQLFRP 60
           MEEA PKPKR VSSLCCLCNNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNQLFRP
Sbjct: 1   MEEAAPKPKRAVSSLCCLCNNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNQLFRP 60

Query: 61  GERIAVGASGGKDSTVLAYVLSELNQRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120
           GERIAVGASGGKDSTVLAYVLSELNQRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ
Sbjct: 61  GERIAVGASGGKDSTVLAYVLSELNQRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120

Query: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAAWLKVDKLATGHNA 180
           YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAA LKVDKLATGHNA
Sbjct: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNA 180

Query: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIVI 230
           DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIV+
Sbjct: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIVM 229

[Close]

BLAST of IVF0002442 vs. ExPASy TrEMBL
Match: A0A6J1KNU4 (Cytoplasmic tRNA 2-thiolation protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111496254 PE=3 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 5.0e-123
Identity = 218/229 (95.20%), Postives = 224/229 (97.82%), Query Frame = 0


Query: 1   MEEAGPKPKRPVSSLCCLCNNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNQLFRP 60
           MEEAG KP++ VS LCC+C+NRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKN LFRP
Sbjct: 1   MEEAGAKPRKGVSCLCCICDNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNHLFRP 60

Query: 61  GERIAVGASGGKDSTVLAYVLSELNQRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120
           GERIAVGASGGKDSTVLAYVLSELN+RHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ
Sbjct: 61  GERIAVGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120

Query: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAAWLKVDKLATGHNA 180
           YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAA LKVDKLATGHNA
Sbjct: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNA 180

Query: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIVI 230
           DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIV+
Sbjct: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIVM 229

[Close]

BLAST of IVF0002442 vs. ExPASy TrEMBL
Match: A0A6J1GII7 (Cytoplasmic tRNA 2-thiolation protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111454465 PE=3 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 1.2e-121
Identity = 218/229 (95.20%), Postives = 222/229 (96.94%), Query Frame = 0


Query: 1   MEEAGPKPKRPVSSLCCLCNNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNQLFRP 60
           MEEAG K +R VS LC +CNNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKN LFRP
Sbjct: 1   MEEAGAKSRRGVSCLCGICNNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNHLFRP 60

Query: 61  GERIAVGASGGKDSTVLAYVLSELNQRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120
           GERIAVGASGGKDSTVLAYVLSELN+RHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ
Sbjct: 61  GERIAVGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120

Query: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAAWLKVDKLATGHNA 180
           YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAA LKVDKLATGHNA
Sbjct: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNA 180

Query: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIVI 230
           DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIV+
Sbjct: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIVM 229

[Close]

BLAST of IVF0002442 vs. ExPASy TrEMBL
Match: A0A6J1CSW4 (Cytoplasmic tRNA 2-thiolation protein 1 OS=Momordica charantia OX=3673 GN=LOC111014001 PE=3 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 1.6e-121
Identity = 215/229 (93.89%), Postives = 222/229 (96.94%), Query Frame = 0


Query: 1   MEEAGPKPKRPVSSLCCLCNNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNQLFRP 60
           MEE G + K+ VSSLCC+CNNRK +LKRPKTLQQICRECFYEVFEEEIHQVIVKN LF+P
Sbjct: 1   MEEGGARAKKGVSSLCCICNNRKPSLKRPKTLQQICRECFYEVFEEEIHQVIVKNHLFKP 60

Query: 61  GERIAVGASGGKDSTVLAYVLSELNQRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120
           GERIAVGASGGKDSTVLAYVLSELN+RHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ
Sbjct: 61  GERIAVGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120

Query: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAAWLKVDKLATGHNA 180
           YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAA LKVDKLATGHNA
Sbjct: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNA 180

Query: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIVI 230
           DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIV+
Sbjct: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIVM 229

[Close]

BLAST of IVF0002442 vs. NCBI nr
Match: XP_008445303.1 (PREDICTED: cytoplasmic tRNA 2-thiolation protein 1 [Cucumis melo])

HSP 1 Score: 468 bits (1203), Expect = 6.66e-163
Identity = 228/229 (99.56%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MEEAGPKPKRPVSSLCCLCNNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNQLFRP 60
           MEEAGPKPKRPVSSLCCLCNNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNQLFRP
Sbjct: 1   MEEAGPKPKRPVSSLCCLCNNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNQLFRP 60

Query: 61  GERIAVGASGGKDSTVLAYVLSELNQRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120
           GERIAVGASGGKDSTVLAYVLSELNQRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ
Sbjct: 61  GERIAVGASGGKDSTVLAYVLSELNQRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120

Query: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAAWLKVDKLATGHNA 180
           YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAAWLKVDKLATGHNA
Sbjct: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAAWLKVDKLATGHNA 180

Query: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIVI 229
           DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIV+
Sbjct: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIVM 229

[Close]

BLAST of IVF0002442 vs. NCBI nr
Match: XP_038886415.1 (cytoplasmic tRNA 2-thiolation protein 1 [Benincasa hispida])

HSP 1 Score: 458 bits (1179), Expect = 2.98e-159
Identity = 225/229 (98.25%), Postives = 227/229 (99.13%), Query Frame = 0


Query: 1   MEEAGPKPKRPVSSLCCLCNNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNQLFRP 60
           MEEAGPKPK+ VSSLCCLCNNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNQLFRP
Sbjct: 1   MEEAGPKPKKAVSSLCCLCNNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNQLFRP 60

Query: 61  GERIAVGASGGKDSTVLAYVLSELNQRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120
           GERIAVGASGGKDSTVLAYVLSELNQRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ
Sbjct: 61  GERIAVGASGGKDSTVLAYVLSELNQRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120

Query: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAAWLKVDKLATGHNA 180
           YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAA LKVDKLATGHNA
Sbjct: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNA 180

Query: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIVI 229
           DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIV+
Sbjct: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIVM 229

[Close]

BLAST of IVF0002442 vs. NCBI nr
Match: XP_011649473.1 (cytoplasmic tRNA 2-thiolation protein 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 457 bits (1176), Expect = 8.52e-159
Identity = 225/229 (98.25%), Postives = 226/229 (98.69%), Query Frame = 0


Query: 1   MEEAGPKPKRPVSSLCCLCNNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNQLFRP 60
           MEEA PKPKR VSSLCCLCNNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNQLFRP
Sbjct: 1   MEEAAPKPKRAVSSLCCLCNNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNQLFRP 60

Query: 61  GERIAVGASGGKDSTVLAYVLSELNQRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120
           GERIAVGASGGKDSTVLAYVLSELNQRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ
Sbjct: 61  GERIAVGASGGKDSTVLAYVLSELNQRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120

Query: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAAWLKVDKLATGHNA 180
           YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAA LKVDKLATGHNA
Sbjct: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNA 180

Query: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIVI 229
           DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIV+
Sbjct: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIVM 229

[Close]

BLAST of IVF0002442 vs. NCBI nr
Match: XP_023002400.1 (cytoplasmic tRNA 2-thiolation protein 1 [Cucurbita maxima])

HSP 1 Score: 446 bits (1146), Expect = 3.33e-154
Identity = 218/229 (95.20%), Postives = 224/229 (97.82%), Query Frame = 0


Query: 1   MEEAGPKPKRPVSSLCCLCNNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNQLFRP 60
           MEEAG KP++ VS LCC+C+NRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKN LFRP
Sbjct: 1   MEEAGAKPRKGVSCLCCICDNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNHLFRP 60

Query: 61  GERIAVGASGGKDSTVLAYVLSELNQRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120
           GERIAVGASGGKDSTVLAYVLSELN+RHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ
Sbjct: 61  GERIAVGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120

Query: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAAWLKVDKLATGHNA 180
           YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAA LKVDKLATGHNA
Sbjct: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNA 180

Query: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIVI 229
           DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIV+
Sbjct: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIVM 229

[Close]

BLAST of IVF0002442 vs. NCBI nr
Match: XP_023538431.1 (cytoplasmic tRNA 2-thiolation protein 1 [Cucurbita pepo subsp. pepo] >XP_023538432.1 cytoplasmic tRNA 2-thiolation protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 443 bits (1139), Expect = 3.87e-153
Identity = 218/229 (95.20%), Postives = 223/229 (97.38%), Query Frame = 0


Query: 1   MEEAGPKPKRPVSSLCCLCNNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNQLFRP 60
           MEEAG KP++ VS LC +CNNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKN LFRP
Sbjct: 1   MEEAGAKPRKGVSCLCGICNNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNHLFRP 60

Query: 61  GERIAVGASGGKDSTVLAYVLSELNQRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120
           GERIAVGASGGKDSTVLAYVLSELN+RHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ
Sbjct: 61  GERIAVGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120

Query: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAAWLKVDKLATGHNA 180
           YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAA LKVDKLATGHNA
Sbjct: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNA 180

Query: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIVI 229
           DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIV+
Sbjct: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIVM 229

[Close]

BLAST of IVF0002442 vs. TAIR 10
Match: AT2G44270.1 (repressor of lrx1 )

HSP 1 Score: 413.7 bits (1062), Expect = 1.3e-115
Identity = 198/224 (88.39%), Postives = 214/224 (95.54%), Query Frame = 0


Query: 7   KPKRPVSS-LCCLCNNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNQLFRPGERIA 66
           K K+ V+S LCCLCN R+  LKRPKTLQQICRECFYEVFEEEIHQVIV+N+LF+ GER+A
Sbjct: 4   KNKKAVASRLCCLCNLRRPVLKRPKTLQQICRECFYEVFEEEIHQVIVQNRLFKSGERVA 63

Query: 67  VGASGGKDSTVLAYVLSELNQRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQYGLPL 126
           +GASGGKDSTVLAYVLSELN+RHNYGLDLFLLS+DEGITGYRDDSLETVKRNE+QYGLPL
Sbjct: 64  IGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSIDEGITGYRDDSLETVKRNEVQYGLPL 123

Query: 127 QIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAAWLKVDKLATGHNADDMAE 186
           +IVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAA LKV+KL TGHNADD+AE
Sbjct: 124 KIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVEKLVTGHNADDIAE 183

Query: 187 TVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIVI 230
           TVLLNILRGDIARLSRCT+I TGEDGPIPRCKPFKYTYEKEIV+
Sbjct: 184 TVLLNILRGDIARLSRCTSITTGEDGPIPRCKPFKYTYEKEIVM 227

[Close]

BLAST of IVF0002442 vs. TAIR 10
Match: AT2G44270.2 (repressor of lrx1 )

HSP 1 Score: 386.7 bits (992), Expect = 1.7e-107
Identity = 189/228 (82.89%), Postives = 205/228 (89.91%), Query Frame = 0


Query: 7   KPKRPVSS-LCCLCNNRKAALKRPKTLQQ----------ICRECFYEVFEEEIHQVIVKN 66
           K K+ V+S LCCLCN R+  LKRPKTLQQ            RECFYEVFEEEIHQVIV+N
Sbjct: 4   KNKKAVASRLCCLCNLRRPVLKRPKTLQQQKLGTHFYTVSVRECFYEVFEEEIHQVIVQN 63

Query: 67  QLFRPGERIAVGASGGKDSTVLAYVLSELNQRHNYGLDLFLLSVDEGITGYRDDSLETVK 126
           +LF+ GER+A+GASGGKDSTVLAYVLSELN+RHNYGLDLFLLS+DEGITGYRDDSLETVK
Sbjct: 64  RLFKSGERVAIGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSIDEGITGYRDDSLETVK 123

Query: 127 RNEIQYGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAAWLKVDKLA 186
           RNE+QYGLPL+IVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAA LKV+KL 
Sbjct: 124 RNEVQYGLPLKIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVEKLV 183

Query: 187 TGHNADDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTY 224
           TGHNADD+AETVLLNILRGDIARLSRCT+I TGEDGPIPRCKPF +TY
Sbjct: 184 TGHNADDIAETVLLNILRGDIARLSRCTSITTGEDGPIPRCKPFNFTY 231

[Close]

BLAST of IVF0002442 vs. TAIR 10
Match: AT1G76170.1 (2-thiocytidine tRNA biosynthesis protein, TtcA )

HSP 1 Score: 368.2 bits (944), Expect = 6.3e-102
Identity = 174/192 (90.62%), Postives = 187/192 (97.40%), Query Frame = 0


Query: 38  ECFYEVFEEEIHQVIVKNQLFRPGERIAVGASGGKDSTVLAYVLSELNQRHNYGLDLFLL 97
           ECFYEVFEEEIHQVIV N+LF+ GER+A+GASGGKDS+VLAYVLSELN+RH+YGLDLFLL
Sbjct: 14  ECFYEVFEEEIHQVIVGNRLFKFGERVAIGASGGKDSSVLAYVLSELNRRHSYGLDLFLL 73

Query: 98  SVDEGITGYRDDSLETVKRNEIQYGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVF 157
           S+DEGITGYRDDSLETVKRNE+QYGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVF
Sbjct: 74  SIDEGITGYRDDSLETVKRNEVQYGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVF 133

Query: 158 RRQALDRGAAWLKVDKLATGHNADDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCK 217
           RRQALDRGAA LKVDKL TGHNADD+AETV+LNILRGDIARLSRCT+I TGEDGPIPRCK
Sbjct: 134 RRQALDRGAALLKVDKLVTGHNADDIAETVVLNILRGDIARLSRCTSITTGEDGPIPRCK 193

Query: 218 PFKYTYEKEIVI 230
           PFKYTYEKEIV+
Sbjct: 194 PFKYTYEKEIVM 205

The following BLAST results are available for this feature:

BLAST of IVF0002442 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64862	1.9e-114	88.39	Cytoplasmic tRNA 2-thiolation protein 1 OS=Arabidopsis thaliana OX=3702 GN=NCS6 ...	[more]
Q6Z6G6	4.7e-110	85.02	Cytoplasmic tRNA 2-thiolation protein 1 OS=Oryza sativa subsp. japonica OX=39947...	[more]
A8JF71	1.2e-94	74.42	Cytoplasmic tRNA 2-thiolation protein 1 OS=Chlamydomonas reinhardtii OX=3055 GN=...	[more]
Q94480	1.1e-90	68.12	Cytoplasmic tRNA 2-thiolation protein 1 OS=Dictyostelium discoideum OX=44689 GN=...	[more]
Q5FW05	4.2e-90	71.03	Cytoplasmic tRNA 2-thiolation protein 1 OS=Xenopus tropicalis OX=8364 GN=ctu1 PE...	[more]

BLAST of IVF0002442 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BD41	1.2e-129	99.56	Cytoplasmic tRNA 2-thiolation protein 1 OS=Cucumis melo OX=3656 GN=LOC103488373 ...	[more]
A0A0A0LKF0	1.7e-126	98.25	Cytoplasmic tRNA 2-thiolation protein 1 OS=Cucumis sativus OX=3659 GN=NCS6 PE=3 ...	[more]
A0A6J1KNU4	5.0e-123	95.20	Cytoplasmic tRNA 2-thiolation protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111496...	[more]
A0A6J1GII7	1.2e-121	95.20	Cytoplasmic tRNA 2-thiolation protein 1 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1CSW4	1.6e-121	93.89	Cytoplasmic tRNA 2-thiolation protein 1 OS=Momordica charantia OX=3673 GN=LOC111...	[more]

BLAST of IVF0002442 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008445303.1	6.66e-163	99.56	PREDICTED: cytoplasmic tRNA 2-thiolation protein 1 [Cucumis melo]	[more]
XP_038886415.1	2.98e-159	98.25	cytoplasmic tRNA 2-thiolation protein 1 [Benincasa hispida]	[more]
XP_011649473.1	8.52e-159	98.25	cytoplasmic tRNA 2-thiolation protein 1 isoform X1 [Cucumis sativus]	[more]
XP_023002400.1	3.33e-154	95.20	cytoplasmic tRNA 2-thiolation protein 1 [Cucurbita maxima]	[more]
XP_023538431.1	3.87e-153	95.20	cytoplasmic tRNA 2-thiolation protein 1 [Cucurbita pepo subsp. pepo] >XP_0235384...	[more]

BLAST of IVF0002442 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44270.1	1.3e-115	88.39	repressor of lrx1	[more]
AT2G44270.2	1.7e-107	82.89	repressor of lrx1	[more]
AT1G76170.1	6.3e-102	90.63	2-thiocytidine tRNA biosynthesis protein, TtcA	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011063	tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal	PFAM	PF01171	ATP_bind_3	coord: 64..206 e-value: 1.1E-12 score: 48.1
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620	HUPs	coord: 15..232 e-value: 1.4E-68 score: 233.3
None	No IPR available	PANTHER	PTHR11807	ATPASES OF THE PP SUPERFAMILY-RELATED	coord: 15..230
None	No IPR available	CDD	cd01993	Alpha_ANH_like_II	coord: 63..228 e-value: 4.50063E-84 score: 249.472
None	No IPR available	SUPERFAMILY	52402	Adenine nucleotide alpha hydrolases-like	coord: 38..230
IPR000541	Cytoplasmic tRNA 2-thiolation protein 1	PANTHER	PTHR11807:SF12	CYTOPLASMIC TRNA 2-THIOLATION PROTEIN 1	coord: 15..230

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0002442.2	IVF0002442.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032447	protein urmylation
biological_process	GO:0002143	tRNA wobble position uridine thiolation
biological_process	GO:0034227	tRNA thio-modification
biological_process	GO:0002098	tRNA wobble uridine modification
cellular_component	GO:0002144	cytosolic tRNA wobble base thiouridylase complex
molecular_function	GO:0016779	nucleotidyltransferase activity
molecular_function	GO:0000049	tRNA binding