IVF0002428 (gene) Melon (IVF77) v1

Overview
NameIVF0002428
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionZinc finger protein ZPR1-like protein
Locationchr03: 5521322 .. 5521525 (-)
RNA-Seq ExpressionIVF0002428
SyntenyIVF0002428
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAAGTGTTGACATAAGAGACGTCGGAAGAGGTATTTTCGACGCCGATACCTTGTTGGTCATGCGTCGAGAATTCGTCTCCCGATGCGTTTCTTCTAATGTGCATCCCAATGCAGTAAACGACATCGAAAAAAGATATTCCGACGTTTTTTTAGCTTCTTCCGACGTCGTTGTGAATTGGGAGTCCCCTCGTCTCTTGTAG

mRNA sequence

ATGACAAGTGTTGACATAAGAGACGTCGGAAGAGGTATTTTCGACGCCGATACCTTGTTGGTCATGCGTCGAGAATTCGTCTCCCGATGCGTTTCTTCTAATGTGCATCCCAATGCAGTAAACGACATCGAAAAAAGATATTCCGACGTTTTTTTAGCTTCTTCCGACGTCGTTGTGAATTGGGAGTCCCCTCGTCTCTTGTAG

Coding sequence (CDS)

ATGACAAGTGTTGACATAAGAGACGTCGGAAGAGGTATTTTCGACGCCGATACCTTGTTGGTCATGCGTCGAGAATTCGTCTCCCGATGCGTTTCTTCTAATGTGCATCCCAATGCAGTAAACGACATCGAAAAAAGATATTCCGACGTTTTTTTAGCTTCTTCCGACGTCGTTGTGAATTGGGAGTCCCCTCGTCTCTTGTAG

Protein sequence

MTSVDIRDVGRGIFDADTLLVMRREFVSRCVSSNVHPNAVNDIEKRYSDVFLASSDVVVNWESPRLL
Homology
BLAST of IVF0002428 vs. ExPASy TrEMBL
Match: A0A5A7U5Y5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G00190 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.6e-10
Identity = 37/58 (63.79%), Postives = 49/58 (84.48%), Query Frame = 0

Query: 2   TSVDIRDVGRGIFDADTLLVMRREFVSRCVSSNVHPNAVNDIEKRYSDVFLASSDVVV 60
           TS+ IRDVGRGI DA  +LVM R+FVS+ +SS+V P+AVND+EKRY +VF+ASS ++V
Sbjct: 67  TSIGIRDVGRGIPDA--MLVMCRKFVSQRISSDVRPDAVNDVEKRYPNVFVASSKIIV 122

BLAST of IVF0002428 vs. ExPASy TrEMBL
Match: A0A5D3DGV6 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G00040 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.5e-08
Identity = 40/63 (63.49%), Postives = 47/63 (74.60%), Query Frame = 0

Query: 1   MTSVDIRDVGRGIFDADTLLVMRREFVSRCVSSNVHPNAVNDIEKRYSDVFLASSDVVVN 60
           M  V IR V R I +A  +LVMRREFVSR VSS+V P+AVND+ KRY DVFLAS D+V+ 
Sbjct: 107 MKRVGIRAVERDIPNA--VLVMRREFVSRRVSSDVCPDAVNDVGKRYPDVFLASFDIVMR 166

Query: 61  WES 64
            ES
Sbjct: 167 RES 167

BLAST of IVF0002428 vs. ExPASy TrEMBL
Match: A0A5A7T5M8 (Zinc finger protein ZPR1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4533G00110 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.3e-07
Identity = 37/64 (57.81%), Postives = 45/64 (70.31%), Query Frame = 0

Query: 1   MTSVDIRDVGRGIFDADTLLVMRREFVSRCVSSNVHPNAVNDIEKRYSDVFLASSDVVVN 60
           M SV IRDVGRGI +A  +LVM   F+S+ VS +V+ +AV D+ KRY DVFL S DV V 
Sbjct: 108 MKSVSIRDVGRGIPNA--MLVMHGGFISQRVSFDVYLDAVKDVGKRYPDVFLGSFDVFVR 167

Query: 61  WESP 65
            ESP
Sbjct: 168 RESP 169

BLAST of IVF0002428 vs. ExPASy TrEMBL
Match: A0A5A7UDU5 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold428G00260 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.9e-06
Identity = 37/64 (57.81%), Postives = 45/64 (70.31%), Query Frame = 0

Query: 4   VDIRDVGRGIFDADTLLVMRREFVSRCVSSNVHPNAVNDIEKRYSDVFLASSDVVVNWES 63
           +DI DVGRGI DA  +LVM R+FVSR VSS+V P+ V D+  R   V LASSDV++  ES
Sbjct: 484 IDIGDVGRGIPDA--VLVMHRKFVSRRVSSDVRPDIVKDVGNRNPYVVLASSDVMLCRES 543

Query: 64  PRLL 68
             LL
Sbjct: 544 LALL 545

BLAST of IVF0002428 vs. ExPASy TrEMBL
Match: A0A5D3BQN2 (Zinc finger protein ZPR1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold264G001040 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.4e-06
Identity = 36/64 (56.25%), Postives = 43/64 (67.19%), Query Frame = 0

Query: 1   MTSVDIRDVGRGIFDADTLLVMRREFVSRCVSSNVHPNAVNDIEKRYSDVFLASSDVVVN 60
           M SV IRDVGRGI +A  +LVM   F+S+ VS +V  +AV D+ KRY DVFL   DV V 
Sbjct: 108 MKSVSIRDVGRGIPNA--MLVMHGGFISQRVSFDVCLDAVKDVGKRYPDVFLGFFDVFVR 167

Query: 61  WESP 65
            ESP
Sbjct: 168 RESP 169

BLAST of IVF0002428 vs. NCBI nr
Match: KAA0050688.1 (uncharacterized protein E6C27_scaffold673G001730 [Cucumis melo var. makuwa] >TYK07748.1 uncharacterized protein E5676_scaffold1737G00190 [Cucumis melo var. makuwa])

HSP 1 Score: 72.4 bits (176), Expect = 2.59e-14
Identity = 37/58 (63.79%), Postives = 49/58 (84.48%), Query Frame = 0

Query: 2   TSVDIRDVGRGIFDADTLLVMRREFVSRCVSSNVHPNAVNDIEKRYSDVFLASSDVVV 59
           TS+ IRDVGRGI DA  +LVM R+FVS+ +SS+V P+AVND+EKRY +VF+ASS ++V
Sbjct: 67  TSIGIRDVGRGIPDA--MLVMCRKFVSQRISSDVRPDAVNDVEKRYPNVFVASSKIIV 122

BLAST of IVF0002428 vs. NCBI nr
Match: TYK22927.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 67.0 bits (162), Expect = 1.12e-11
Identity = 40/63 (63.49%), Postives = 47/63 (74.60%), Query Frame = 0

Query: 1   MTSVDIRDVGRGIFDADTLLVMRREFVSRCVSSNVHPNAVNDIEKRYSDVFLASSDVVVN 60
           M  V IR V R I +A  +LVMRREFVSR VSS+V P+AVND+ KRY DVFLAS D+V+ 
Sbjct: 107 MKRVGIRAVERDIPNA--VLVMRREFVSRRVSSDVCPDAVNDVGKRYPDVFLASFDIVMR 166

Query: 61  WES 63
            ES
Sbjct: 167 RES 167

BLAST of IVF0002428 vs. NCBI nr
Match: KAA0036659.1 (zinc finger protein ZPR1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 63.5 bits (153), Expect = 2.97e-10
Identity = 37/64 (57.81%), Postives = 45/64 (70.31%), Query Frame = 0

Query: 1   MTSVDIRDVGRGIFDADTLLVMRREFVSRCVSSNVHPNAVNDIEKRYSDVFLASSDVVVN 60
           M SV IRDVGRGI +A  +LVM   F+S+ VS +V+ +AV D+ KRY DVFL S DV V 
Sbjct: 108 MKSVSIRDVGRGIPNA--MLVMHGGFISQRVSFDVYLDAVKDVGKRYPDVFLGSFDVFVR 167

Query: 61  WESP 64
            ESP
Sbjct: 168 RESP 169

BLAST of IVF0002428 vs. NCBI nr
Match: TYK01082.1 (zinc finger protein ZPR1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 59.3 bits (142), Expect = 1.22e-08
Identity = 36/64 (56.25%), Postives = 43/64 (67.19%), Query Frame = 0

Query: 1   MTSVDIRDVGRGIFDADTLLVMRREFVSRCVSSNVHPNAVNDIEKRYSDVFLASSDVVVN 60
           M SV IRDVGRGI +A  +LVM   F+S+ VS +V  +AV D+ KRY DVFL   DV V 
Sbjct: 108 MKSVSIRDVGRGIPNA--MLVMHGGFISQRVSFDVCLDAVKDVGKRYPDVFLGFFDVFVR 167

Query: 61  WESP 64
            ESP
Sbjct: 168 RESP 169

BLAST of IVF0002428 vs. NCBI nr
Match: KAA0053370.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 59.7 bits (143), Expect = 2.54e-08
Identity = 37/64 (57.81%), Postives = 45/64 (70.31%), Query Frame = 0

Query: 4   VDIRDVGRGIFDADTLLVMRREFVSRCVSSNVHPNAVNDIEKRYSDVFLASSDVVVNWES 63
           +DI DVGRGI DA  +LVM R+FVSR VSS+V P+ V D+  R   V LASSDV++  ES
Sbjct: 484 IDIGDVGRGIPDA--VLVMHRKFVSRRVSSDVRPDIVKDVGNRNPYVVLASSDVMLCRES 543

Query: 64  PRLL 67
             LL
Sbjct: 544 LALL 545

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7U5Y53.6e-1063.79Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3DGV61.5e-0863.49NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5A7T5M81.3e-0757.81Zinc finger protein ZPR1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A5A7UDU51.9e-0657.81CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5D3BQN22.4e-0656.25Zinc finger protein ZPR1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
Match NameE-valueIdentityDescription
KAA0050688.12.59e-1463.79uncharacterized protein E6C27_scaffold673G001730 [Cucumis melo var. makuwa] >TYK... [more]
TYK22927.11.12e-1163.49NBS-LRR type resistance protein [Cucumis melo var. makuwa][more]
KAA0036659.12.97e-1057.81zinc finger protein ZPR1-like protein [Cucumis melo var. makuwa][more]
TYK01082.11.22e-0856.25zinc finger protein ZPR1-like protein [Cucumis melo var. makuwa][more]
KAA0053370.12.54e-0857.81CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0002428.1IVF0002428.1mRNA