IVF0002397 (gene) Melon (IVF77) v1

Overview
NameIVF0002397
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR9-like
Locationchr02: 5234921 .. 5235883 (-)
RNA-Seq ExpressionIVF0002397
SyntenyIVF0002397
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTAAAACAAAAACTCTCAAATTCCCTCAAATGGGTTACTCCATTTCCTTCTAATACTAACAAAATCTCACAAAAAGATACCATTTTTCAAAGCTTCCACATTCCAGTTCCATGGCTTCGAAAAGAGGAGAAGCAAGAAGAAGAGCAAGAAAAACAACAACCCAATTGAAGAACAAGAAGATCAAGAAGAACATCAAGAACAACAACATCAAGTTAGAAGAAGAAGAAATTGAAAAAGGTTCAAGCTCTTCAACAACCATCAATTTTGAAGAAAAATCAGTTTCGAGAAGCTGTGCTTTTGAAGAAGAAGAAGAAGAAGAGTGTTGTAGTACTCCAAAAGCAGAGAGATTCAAAATCCCAGAAATCAAAATATGTCCACCTGCTCCTAAAAAGCGAAGGCTTTTTTCAAATTCAAATTCAAATTGTTCTTTACAAAGACCTTCTCCTATTGCTTTCTTTGCCTCACCGGATATAGAGCTTTTCTTCTTCTTCTCATCACGATGACATTTCATATTTACTAATAGCTAATTTCTTTTTTCTTTCCTTTAGTACTCAAATTAGCTTATGGGTTTCATTTCTCTCAAAGAATGAGAGAAAATGTTGTTGATAAGAGAGTATAAGAGTTTAGAAACAGAGAAGTTTGAGTTTTTTTTTTTCTCTGACCAGAAAAATTCAGCTTTTAGTTTTACCAAAGGGCTGGTTTTGTATATGTAATTTGTATGGCTGTGGCTATGGGGAATGGCTATGGCTAATTAATTAGCTATGAAGGTTTTTAATTAGTGTTTCTTTTTTCTTTTTTCTTTTTTATTTTGATGATTTAATGTAATATTTCTGACTTTTATTAATGAGTGTGGCAATGTATAAGTGTGTGTGCTTTTGGGTTTGTGTTGTTTTGTGATATTAGCTTTTGAATAATTAGTCAAGATGAG

mRNA sequence

TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTAAAACAAAAACTCTCAAATTCCCTCAAATGGGTTACTCCATTTCCTTCTAATACTAACAAAATCTCACAAAAAGATACCATTTTTCAAAGCTTCCACATTCCAGTTCCATGGCTTCGAAAAGAGGAGAAGCAAGAAGAAGAGCAAGAAAAACAACAACCCAATTGAAGAACAAGAAGATCAAGAAGAACATCAAGAACAACAACATCAAGTTAGAAGAAGAAGAAATTGAAAAAGGTTCAAGCTCTTCAACAACCATCAATTTTGAAGAAAAATCAGTTTCGAGAAGCTGTGCTTTTGAAGAAGAAGAAGAAGAAGAGTGTTGTAGTACTCCAAAAGCAGAGAGATTCAAAATCCCAGAAATCAAAATATGTCCACCTGCTCCTAAAAAGCGAAGGCTTTTTTCAAATTCAAATTCAAATTGTTCTTTACAAAGACCTTCTCCTATTGCTTTCTTTGCCTCACCGGATATAGAGCTTTTCTTCTTCTTCTCATCACGATGACATTTCATATTTACTAATAGCTAATTTCTTTTTTCTTTCCTTTAGTACTCAAATTAGCTTATGGGTTTCATTTCTCTCAAAGAATGAGAGAAAATGTTGTTGATAAGAGAGTATAAGAGTTTAGAAACAGAGAAGTTTGAGTTTTTTTTTTTCTCTGACCAGAAAAATTCAGCTTTTAGTTTTACCAAAGGGCTGGTTTTGTATATGTAATTTGTATGGCTGTGGCTATGGGGAATGGCTATGGCTAATTAATTAGCTATGAAGGTTTTTAATTAGTGTTTCTTTTTTCTTTTTTCTTTTTTATTTTGATGATTTAATGTAATATTTCTGACTTTTATTAATGAGTGTGGCAATGTATAAGTGTGTGTGCTTTTGGGTTTGTGTTGTTTTGTGATATTAGCTTTTGAATAATTAGTCAAGATGAG

Coding sequence (CDS)

ATGGCTTCGAAAAGAGGAGAAGCAAGAAGAAGAGCAAGAAAAACAACAACCCAATTGAAGAACAAGAAGATCAAGAAGAACATCAAGAACAACAACATCAAGTTAGAAGAAGAAGAAATTGAAAAAGGTTCAAGCTCTTCAACAACCATCAATTTTGAAGAAAAATCAGTTTCGAGAAGCTGTGCTTTTGAAGAAGAAGAAGAAGAAGAGTGTTGTAGTACTCCAAAAGCAGAGAGATTCAAAATCCCAGAAATCAAAATATGTCCACCTGCTCCTAAAAAGCGAAGGCTTTTTTCAAATTCAAATTCAAATTGTTCTTTACAAAGACCTTCTCCTATTGCTTTCTTTGCCTCACCGGATATAGAGCTTTTCTTCTTCTTCTCATCACGATGA

Protein sequence

MASKRGEARRRARKTTTQLKNKKIKKNIKNNNIKLEEEEIEKGSSSSTTINFEEKSVSRSCAFEEEEEEECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSPIAFFASPDIELFFFFSSR
Homology
BLAST of IVF0002397 vs. ExPASy Swiss-Prot
Match: F4IWB3 (Cyclin-dependent protein kinase inhibitor SMR13 OS=Arabidopsis thaliana OX=3702 GN=SMR13 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.1e-07
Identity = 30/54 (55.56%), Postives = 39/54 (72.22%), Query Frame = 0

Query: 72  CSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSPIAFFASPDIELFF 126
           C TPKA++ +IPE+  CPPAPKK+R+    + NC L+R   I FFA P+IELFF
Sbjct: 54  CCTPKAKKSRIPEMLTCPPAPKKQRV----SKNCVLRR-RQIVFFAPPEIELFF 102

BLAST of IVF0002397 vs. ExPASy Swiss-Prot
Match: Q3ECS5 (Cyclin-dependent protein kinase inhibitor SMR9 OS=Arabidopsis thaliana OX=3702 GN=SMR9 PE=3 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 4.3e-04
Identity = 45/128 (35.16%), Postives = 66/128 (51.56%), Query Frame = 0

Query: 1   MASKRGEARRRARKTTTQLKNKKIKKNIKNNNIKLEEEEIEKGSSSSTTINFEEKSVSRS 60
           MASK    ++  R+TTT+ +        K ++ K         S  ++T +      S +
Sbjct: 1   MASK---GKKPLRRTTTRRR--------KRSHFKNPSPPCSINSDVTSTSSTSTSPTSTA 60

Query: 61  CAFEEEEEEECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSPIAFFASPD 120
                  E  CC TP  E+ +IPE+  CPPAPKK+++      NC+L+R   IAFFA PD
Sbjct: 61  TPSPVSAESGCC-TP--EKSRIPEMLTCPPAPKKQKV----AQNCALRR-RQIAFFAPPD 109

Query: 121 IELFFFFS 129
           +ELFF F+
Sbjct: 121 VELFFVFA 109

BLAST of IVF0002397 vs. ExPASy Swiss-Prot
Match: Q29Q81 (Cyclin-dependent protein kinase inhibitor SMR6 OS=Arabidopsis thaliana OX=3702 GN=SMR6 PE=1 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 5.6e-04
Identity = 28/60 (46.67%), Postives = 34/60 (56.67%), Query Frame = 0

Query: 67  EEEECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSPIAFFASP-DIELFF 126
           EEEEC +TP A+  KIPE+  CPPAP+KRR      SN   +      FF  P D+E  F
Sbjct: 55  EEEECSTTPTAKETKIPELLECPPAPRKRRPALKCRSNVVRE------FFTPPSDLETVF 108

BLAST of IVF0002397 vs. ExPASy Swiss-Prot
Match: Q1G3Y4 (Cyclin-dependent protein kinase inhibitor SMR15 OS=Arabidopsis thaliana OX=3702 GN=SMR15 PE=3 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 7.3e-04
Identity = 27/72 (37.50%), Postives = 39/72 (54.17%), Query Frame = 0

Query: 56  SVSRSCAFEEEEEEECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSPIAF 115
           S+S S     E+E+ C +TP A+  +IP +  CPPAPKKR+L    +         P  F
Sbjct: 39  SLSSSAVSNTEDEDLCPTTPTADSVRIPTVIPCPPAPKKRKLTLKVSY-------GPREF 98

Query: 116 FASPDIELFFFF 128
           F+ PD+E  F +
Sbjct: 99  FSPPDLETVFIY 103

BLAST of IVF0002397 vs. ExPASy TrEMBL
Match: A0A0A0M041 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G613590 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 5.5e-55
Identity = 127/133 (95.49%), Postives = 129/133 (96.99%), Query Frame = 0

Query: 1   MASKRGEARRRARK-TTTQLKNKKIKKNIKNNNIKLEEEEIEKGSSSSTTINFEEKSVS- 60
           MASKRGEARRRARK TTTQLKNKKIKKNIKNNNIKLEEEEIEKG+SSSTTINFEEKSVS 
Sbjct: 1   MASKRGEARRRARKTTTTQLKNKKIKKNIKNNNIKLEEEEIEKGTSSSTTINFEEKSVSR 60

Query: 61  RSCAF-EEEEEEECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSPIAFFA 120
           RSC F EEEEEEECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSPIAFFA
Sbjct: 61  RSCDFEEEEEEEECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSPIAFFA 120

Query: 121 SPDIELFFFFSSR 131
           SPDIELFFFFSS+
Sbjct: 121 SPDIELFFFFSSQ 133

BLAST of IVF0002397 vs. ExPASy TrEMBL
Match: A0A6J1DK32 (cyclin-dependent protein kinase inhibitor SMR9-like OS=Momordica charantia OX=3673 GN=LOC111021634 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 5.0e-16
Identity = 69/134 (51.49%), Postives = 84/134 (62.69%), Query Frame = 0

Query: 1   MASKRGEARRRARKTTTQLKNKKIKKNIKNNNIKLEEEEIEKGSSSSTTINFEEKSVSRS 60
           MASK G AR +  K + ++K K  ++  K N          + + + T +       S S
Sbjct: 1   MASKGGIARTK-MKMSKKIKKKSPQRMKKRNPPPPSPPPKNQETETETAVEL----ASSS 60

Query: 61  CAFEEEEE-----EECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSPIAF 120
            A  E E      EECC TPKAERF+IPEIKICPPAPKK+R+FSN +   +LQRPSPIAF
Sbjct: 61  AAMAENESMSSDLEECC-TPKAERFRIPEIKICPPAPKKQRIFSNCS---NLQRPSPIAF 120

Query: 121 FASPDIELFFFFSS 130
           FASPDIELFFFFSS
Sbjct: 121 FASPDIELFFFFSS 125

BLAST of IVF0002397 vs. ExPASy TrEMBL
Match: A0A7N2KKU1 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.5e-12
Identity = 62/127 (48.82%), Postives = 75/127 (59.06%), Query Frame = 0

Query: 5   RGEARRRARKTTTQLKNKKIKKNIKNNNIKLEEEEIEKGSSSSTTINFEEK-SVSRSCAF 64
           R   R+  +K   Q KN+K  +++ +N              SSTT +F  K S   S   
Sbjct: 15  RKPRRKYFKKKLVQPKNQKASRSLPSN--------------SSTTTSFNSKISDLTSEGV 74

Query: 65  EEEEEEECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSPIAFFASPDIEL 124
           E E     CSTPKA+RFKIPEI  CPPAPKK+R+     SNCSLQR SPIAFFA PD+EL
Sbjct: 75  EVELTSSGCSTPKAQRFKIPEILTCPPAPKKQRVV----SNCSLQR-SPIAFFAPPDLEL 122

Query: 125 FFFFSSR 131
           FFFF+ R
Sbjct: 135 FFFFALR 122

BLAST of IVF0002397 vs. ExPASy TrEMBL
Match: A0A7J9M5Q7 (Uncharacterized protein OS=Gossypium schwendimanii OX=34291 GN=Goshw_021036 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 4.4e-12
Identity = 58/136 (42.65%), Postives = 79/136 (58.09%), Query Frame = 0

Query: 2   ASKRGEARRRARKTTTQLKNKKIKKNIKNNNIKLEEEEIEKGSSSSTTINFEEKSVSRSC 61
           +S+RG+ RR A K     +  K +K +   +I ++       +S+S T+      +    
Sbjct: 4   SSRRGKTRRNASKP----RRSKYRKKLVKPSINIQ-------TSTSATLEDSASKIDDGF 63

Query: 62  AFEEEEEEE-------CCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSPIA 121
           A +   E +        CSTPKA+R++IPEI  CPPAPKKRR   +  SNCSLQR  PIA
Sbjct: 64  ALDHNIEGDDDVSTTSPCSTPKAQRYRIPEIHTCPPAPKKRR---SVPSNCSLQRTPPIA 123

Query: 122 FFASPDIELFFFFSSR 131
           FFASPD+ELFFFF+ R
Sbjct: 124 FFASPDLELFFFFAFR 125

BLAST of IVF0002397 vs. ExPASy TrEMBL
Match: A0A7J8XB55 (Uncharacterized protein OS=Gossypium aridum OX=34290 GN=Goari_025762 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 7.5e-12
Identity = 57/129 (44.19%), Postives = 80/129 (62.02%), Query Frame = 0

Query: 3   SKRGEARRRARK-TTTQLKNKKIKKNIKNNNIKLEEEEIEKGSSSSTTINFEEKSVSRSC 62
           S+RG+  R+A K   +  K K +K  I+  ++    EE+   SS+ T+ N  E   S + 
Sbjct: 5   SRRGKTTRKASKPRRSHYKRKLVKPTIQKASVL---EELPSNSSTITSDNLSEMEGSTTT 64

Query: 63  AFEEEEEEECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSPIAFFASPDI 122
           A         CSTPKA+RF+IPE+  CPPAPKK+R+     SNCSLQR +P+AFF+ PD+
Sbjct: 65  A-------SPCSTPKAQRFRIPEMDTCPPAPKKQRVL----SNCSLQR-TPVAFFSPPDL 118

Query: 123 ELFFFFSSR 131
           +LFFFF+ R
Sbjct: 125 DLFFFFALR 118

BLAST of IVF0002397 vs. NCBI nr
Match: KGN66487.1 (hypothetical protein Csa_006949 [Cucumis sativus])

HSP 1 Score: 221 bits (564), Expect = 4.13e-72
Identity = 127/133 (95.49%), Postives = 129/133 (96.99%), Query Frame = 0

Query: 1   MASKRGEARRRARKTTT-QLKNKKIKKNIKNNNIKLEEEEIEKGSSSSTTINFEEKSVSR 60
           MASKRGEARRRARKTTT QLKNKKIKKNIKNNNIKLEEEEIEKG+SSSTTINFEEKSVSR
Sbjct: 1   MASKRGEARRRARKTTTTQLKNKKIKKNIKNNNIKLEEEEIEKGTSSSTTINFEEKSVSR 60

Query: 61  -SCAFEEEEEEE-CCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSPIAFFA 120
            SC FEEEEEEE CCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSPIAFFA
Sbjct: 61  RSCDFEEEEEEEECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSPIAFFA 120

Query: 121 SPDIELFFFFSSR 130
           SPDIELFFFFSS+
Sbjct: 121 SPDIELFFFFSSQ 133

BLAST of IVF0002397 vs. NCBI nr
Match: KAG6590203.1 (Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023854.1 Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 102 bits (253), Expect = 6.70e-25
Identity = 76/137 (55.47%), Postives = 94/137 (68.61%), Query Frame = 0

Query: 1   MASKRGEARRRARKTT-TQLK-NKKIKKNIKNNNIKL----EEEEIEKGSS-SSTTINFE 60
           MASK G  R + +KT  TQLK N+KIKK +K+ + ++      EEIE  SS +   +   
Sbjct: 1   MASKGGGRRNKGKKTAKTQLKKNQKIKK-MKDQSKRIVSTKRTEEIEVSSSIAMAAMAAM 60

Query: 61  EKSVSRSCAFEEEEEEECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSPI 120
           E+S S S  FEE      CSTPKAERF+IPEIKICPPAPKK+R+     SNCS Q+PSPI
Sbjct: 61  EESASSSSDFEE------CSTPKAERFRIPEIKICPPAPKKQRI----TSNCSSQKPSPI 120

Query: 121 AFFASPDIELFFFFSSR 130
           +FFASPDIE+FFF SS+
Sbjct: 121 SFFASPDIEMFFFLSSQ 126

BLAST of IVF0002397 vs. NCBI nr
Match: XP_022154348.1 (cyclin-dependent protein kinase inhibitor SMR9-like [Momordica charantia])

HSP 1 Score: 98.6 bits (244), Expect = 1.58e-23
Identity = 51/61 (83.61%), Postives = 56/61 (91.80%), Query Frame = 0

Query: 69  EECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSPIAFFASPDIELFFFFS 128
           EECC TPKAERF+IPEIKICPPAPKK+R+FSN ++   LQRPSPIAFFASPDIELFFFFS
Sbjct: 69  EECC-TPKAERFRIPEIKICPPAPKKQRIFSNCSN---LQRPSPIAFFASPDIELFFFFS 125

BLAST of IVF0002397 vs. NCBI nr
Match: KAG7022087.1 (Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 94.7 bits (234), Expect = 5.73e-22
Identity = 71/139 (51.08%), Postives = 83/139 (59.71%), Query Frame = 0

Query: 1   MASKRGEARRRARKTTTQLKNKKIKKNIKNN-----------NIKLEEEEIEKGSSSSTT 60
           MASK G  RR    T    K KK  KN  NN           + K+ EE  E  +SSS+ 
Sbjct: 1   MASKGGRTRRGTNPTPPLKKTKKKLKNSTNNGGRRRRRRIIMSSKIREEIEEAAASSSSA 60

Query: 61  INFEEKSVSRSCAFEEEEEEECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQR 120
           +   ++  S S       + E CSTPKA+RFKIPEI+ICPPAPKK+R  SN    CSLQ+
Sbjct: 61  MAAIDEQASSS-------DFEHCSTPKADRFKIPEIQICPPAPKKQRPISN----CSLQK 120

Query: 121 PSPIAFFASPDIELFFFFS 128
            SPIAFFASPDIELFFFFS
Sbjct: 121 HSPIAFFASPDIELFFFFS 128

BLAST of IVF0002397 vs. NCBI nr
Match: XP_023530358.1 (cyclin-dependent protein kinase inhibitor SMR9-like [Cucurbita pepo subsp. pepo] >KAG6588189.1 Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 94.4 bits (233), Expect = 8.34e-22
Identity = 71/140 (50.71%), Postives = 83/140 (59.29%), Query Frame = 0

Query: 1   MASKRGEARRRARKTTTQLKNKKIKKNIKNN------------NIKLEEEEIEKGSSSST 60
           MASK G  RR    T    K KK  KN  NN            + K+ EE  E  +SSS+
Sbjct: 1   MASKGGRTRRGTNPTPPLKKTKKKLKNSTNNGGRRRRRRRIIMSSKIREEIEEAAASSSS 60

Query: 61  TINFEEKSVSRSCAFEEEEEEECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQ 120
            +   ++  S S       + E CSTPKA+RFKIPEI+ICPPAPKK+R  SN    CSLQ
Sbjct: 61  AMAAIDEQASSS-------DFEHCSTPKADRFKIPEIQICPPAPKKQRPISN----CSLQ 120

Query: 121 RPSPIAFFASPDIELFFFFS 128
           + SPIAFFASPDIELFFFFS
Sbjct: 121 KHSPIAFFASPDIELFFFFS 129

BLAST of IVF0002397 vs. TAIR 10
Match: AT3G20898.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G51355.1); Has 66 Blast hits to 66 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 57.8 bits (138), Expect = 7.7e-09
Identity = 30/54 (55.56%), Postives = 39/54 (72.22%), Query Frame = 0

Query: 72  CSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSPIAFFASPDIELFF 126
           C TPKA++ +IPE+  CPPAPKK+R+    + NC L+R   I FFA P+IELFF
Sbjct: 54  CCTPKAKKSRIPEMLTCPPAPKKQRV----SKNCVLRR-RQIVFFAPPEIELFF 102

BLAST of IVF0002397 vs. TAIR 10
Match: AT1G51355.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20898.1); Has 52 Blast hits to 52 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.8 bits (107), Expect = 3.0e-05
Identity = 45/128 (35.16%), Postives = 66/128 (51.56%), Query Frame = 0

Query: 1   MASKRGEARRRARKTTTQLKNKKIKKNIKNNNIKLEEEEIEKGSSSSTTINFEEKSVSRS 60
           MASK    ++  R+TTT+ +        K ++ K         S  ++T +      S +
Sbjct: 1   MASK---GKKPLRRTTTRRR--------KRSHFKNPSPPCSINSDVTSTSSTSTSPTSTA 60

Query: 61  CAFEEEEEEECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSPIAFFASPD 120
                  E  CC TP  E+ +IPE+  CPPAPKK+++      NC+L+R   IAFFA PD
Sbjct: 61  TPSPVSAESGCC-TP--EKSRIPEMLTCPPAPKKQKV----AQNCALRR-RQIAFFAPPD 109

Query: 121 IELFFFFS 129
           +ELFF F+
Sbjct: 121 VELFFVFA 109

BLAST of IVF0002397 vs. TAIR 10
Match: AT5G40460.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27630.1); Has 87 Blast hits to 87 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 3.9e-05
Identity = 28/60 (46.67%), Postives = 34/60 (56.67%), Query Frame = 0

Query: 67  EEEECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSPIAFFASP-DIELFF 126
           EEEEC +TP A+  KIPE+  CPPAP+KRR      SN   +      FF  P D+E  F
Sbjct: 55  EEEECSTTPTAKETKIPELLECPPAPRKRRPALKCRSNVVRE------FFTPPSDLETVF 108

BLAST of IVF0002397 vs. TAIR 10
Match: AT1G60783.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 45.1 bits (105), Expect = 5.2e-05
Identity = 27/72 (37.50%), Postives = 39/72 (54.17%), Query Frame = 0

Query: 56  SVSRSCAFEEEEEEECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSPIAF 115
           S+S S     E+E+ C +TP A+  +IP +  CPPAPKKR+L    +         P  F
Sbjct: 39  SLSSSAVSNTEDEDLCPTTPTADSVRIPTVIPCPPAPKKRKLTLKVSY-------GPREF 98

Query: 116 FASPDIELFFFF 128
           F+ PD+E  F +
Sbjct: 99  FSPPDLETVFIY 103

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
F4IWB31.1e-0755.56Cyclin-dependent protein kinase inhibitor SMR13 OS=Arabidopsis thaliana OX=3702 ... [more]
Q3ECS54.3e-0435.16Cyclin-dependent protein kinase inhibitor SMR9 OS=Arabidopsis thaliana OX=3702 G... [more]
Q29Q815.6e-0446.67Cyclin-dependent protein kinase inhibitor SMR6 OS=Arabidopsis thaliana OX=3702 G... [more]
Q1G3Y47.3e-0437.50Cyclin-dependent protein kinase inhibitor SMR15 OS=Arabidopsis thaliana OX=3702 ... [more]
Match NameE-valueIdentityDescription
A0A0A0M0415.5e-5595.49Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G613590 PE=4 SV=1[more]
A0A6J1DK325.0e-1651.49cyclin-dependent protein kinase inhibitor SMR9-like OS=Momordica charantia OX=36... [more]
A0A7N2KKU11.5e-1248.82Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
A0A7J9M5Q74.4e-1242.65Uncharacterized protein OS=Gossypium schwendimanii OX=34291 GN=Goshw_021036 PE=4... [more]
A0A7J8XB557.5e-1244.19Uncharacterized protein OS=Gossypium aridum OX=34290 GN=Goari_025762 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KGN66487.14.13e-7295.49hypothetical protein Csa_006949 [Cucumis sativus][more]
KAG6590203.16.70e-2555.47Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma... [more]
XP_022154348.11.58e-2383.61cyclin-dependent protein kinase inhibitor SMR9-like [Momordica charantia][more]
KAG7022087.15.73e-2251.08Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma... [more]
XP_023530358.18.34e-2250.71cyclin-dependent protein kinase inhibitor SMR9-like [Cucurbita pepo subsp. pepo]... [more]
Match NameE-valueIdentityDescription
AT3G20898.17.7e-0955.56unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G51355.13.0e-0535.16unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G40460.13.9e-0546.67unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G60783.15.2e-0537.50unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 19..41
NoneNo IPR availablePANTHERPTHR33142:SF28SUBFAMILY NOT NAMEDcoord: 19..128
IPR040389Cyclin-dependent protein kinase inhibitor SMRPANTHERPTHR33142CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR13coord: 19..128

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0002397.1IVF0002397.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045839 negative regulation of mitotic nuclear division
biological_process GO:0032875 regulation of DNA endoreduplication
cellular_component GO:0005634 nucleus