IVF0002397 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTAAAACAAAAACTCTCAAATTCCCTCAAATGGGTTACTCCATTTCCTTCTAATACTAACAAAATCTCACAAAAAGATACCATTTTTCAAAGCTTCCACATTCCAGTTCCATGGCTTCGAAAAGAGGAGAAGCAAGAAGAAGAGCAAGAAAAACAACAACCCAATTGAAGAACAAGAAGATCAAGAAGAACATCAAGAACAACAACATCAAGTTAGAAGAAGAAGAAATTGAAAAAGGTTCAAGCTCTTCAACAACCATCAATTTTGAAGAAAAATCAGTTTCGAGAAGCTGTGCTTTTGAAGAAGAAGAAGAAGAAGAGTGTTGTAGTACTCCAAAAGCAGAGAGATTCAAAATCCCAGAAATCAAAATATGTCCACCTGCTCCTAAAAAGCGAAGGCTTTTTTCAAATTCAAATTCAAATTGTTCTTTACAAAGACCTTCTCCTATTGCTTTCTTTGCCTCACCGGATATAGAGCTTTTCTTCTTCTTCTCATCACGATGACATTTCATATTTACTAATAGCTAATTTCTTTTTTCTTTCCTTTAGTACTCAAATTAGCTTATGGGTTTCATTTCTCTCAAAGAATGAGAGAAAATGTTGTTGATAAGAGAGTATAAGAGTTTAGAAACAGAGAAGTTTGAGTTTTTTTTTTTCTCTGACCAGAAAAATTCAGCTTTTAGTTTTACCAAAGGGCTGGTTTTGTATATGTAATTTGTATGGCTGTGGCTATGGGGAATGGCTATGGCTAATTAATTAGCTATGAAGGTTTTTAATTAGTGTTTCTTTTTTCTTTTTTCTTTTTTATTTTGATGATTTAATGTAATATTTCTGACTTTTATTAATGAGTGTGGCAATGTATAAGTGTGTGTGCTTTTGGGTTTGTGTTGTTTTGTGATATTAGCTTTTGAATAATTAGTCAAGATGAG TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTAAAACAAAAACTCTCAAATTCCCTCAAATGGGTTACTCCATTTCCTTCTAATACTAACAAAATCTCACAAAAAGATACCATTTTTCAAAGCTTCCACATTCCAGTTCCATGGCTTCGAAAAGAGGAGAAGCAAGAAGAAGAGCAAGAAAAACAACAACCCAATTGAAGAACAAGAAGATCAAGAAGAACATCAAGAACAACAACATCAAGTTAGAAGAAGAAGAAATTGAAAAAGGTTCAAGCTCTTCAACAACCATCAATTTTGAAGAAAAATCAGTTTCGAGAAGCTGTGCTTTTGAAGAAGAAGAAGAAGAAGAGTGTTGTAGTACTCCAAAAGCAGAGAGATTCAAAATCCCAGAAATCAAAATATGTCCACCTGCTCCTAAAAAGCGAAGGCTTTTTTCAAATTCAAATTCAAATTGTTCTTTACAAAGACCTTCTCCTATTGCTTTCTTTGCCTCACCGGATATAGAGCTTTTCTTCTTCTTCTCATCACGATGACATTTCATATTTACTAATAGCTAATTTCTTTTTTCTTTCCTTTAGTACTCAAATTAGCTTATGGGTTTCATTTCTCTCAAAGAATGAGAGAAAATGTTGTTGATAAGAGAGTATAAGAGTTTAGAAACAGAGAAGTTTGAGTTTTTTTTTTTCTCTGACCAGAAAAATTCAGCTTTTAGTTTTACCAAAGGGCTGGTTTTGTATATGTAATTTGTATGGCTGTGGCTATGGGGAATGGCTATGGCTAATTAATTAGCTATGAAGGTTTTTAATTAGTGTTTCTTTTTTCTTTTTTCTTTTTTATTTTGATGATTTAATGTAATATTTCTGACTTTTATTAATGAGTGTGGCAATGTATAAGTGTGTGTGCTTTTGGGTTTGTGTTGTTTTGTGATATTAGCTTTTGAATAATTAGTCAAGATGAG ATGGCTTCGAAAAGAGGAGAAGCAAGAAGAAGAGCAAGAAAAACAACAACCCAATTGAAGAACAAGAAGATCAAGAAGAACATCAAGAACAACAACATCAAGTTAGAAGAAGAAGAAATTGAAAAAGGTTCAAGCTCTTCAACAACCATCAATTTTGAAGAAAAATCAGTTTCGAGAAGCTGTGCTTTTGAAGAAGAAGAAGAAGAAGAGTGTTGTAGTACTCCAAAAGCAGAGAGATTCAAAATCCCAGAAATCAAAATATGTCCACCTGCTCCTAAAAAGCGAAGGCTTTTTTCAAATTCAAATTCAAATTGTTCTTTACAAAGACCTTCTCCTATTGCTTTCTTTGCCTCACCGGATATAGAGCTTTTCTTCTTCTTCTCATCACGATGA MASKRGEARRRARKTTTQLKNKKIKKNIKNNNIKLEEEEIEKGSSSSTTINFEEKSVSRSCAFEEEEEEECCSTPKAERFKIPEIKICPPAPKKRRLFSNSNSNCSLQRPSPIAFFASPDIELFFFFSSR Homology
BLAST of IVF0002397 vs. ExPASy Swiss-Prot
Match: F4IWB3 (Cyclin-dependent protein kinase inhibitor SMR13 OS=Arabidopsis thaliana OX=3702 GN=SMR13 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.1e-07 Identity = 30/54 (55.56%), Postives = 39/54 (72.22%), Query Frame = 0
BLAST of IVF0002397 vs. ExPASy Swiss-Prot
Match: Q3ECS5 (Cyclin-dependent protein kinase inhibitor SMR9 OS=Arabidopsis thaliana OX=3702 GN=SMR9 PE=3 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 4.3e-04 Identity = 45/128 (35.16%), Postives = 66/128 (51.56%), Query Frame = 0
BLAST of IVF0002397 vs. ExPASy Swiss-Prot
Match: Q29Q81 (Cyclin-dependent protein kinase inhibitor SMR6 OS=Arabidopsis thaliana OX=3702 GN=SMR6 PE=1 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 5.6e-04 Identity = 28/60 (46.67%), Postives = 34/60 (56.67%), Query Frame = 0
BLAST of IVF0002397 vs. ExPASy Swiss-Prot
Match: Q1G3Y4 (Cyclin-dependent protein kinase inhibitor SMR15 OS=Arabidopsis thaliana OX=3702 GN=SMR15 PE=3 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 7.3e-04 Identity = 27/72 (37.50%), Postives = 39/72 (54.17%), Query Frame = 0
BLAST of IVF0002397 vs. ExPASy TrEMBL
Match: A0A0A0M041 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G613590 PE=4 SV=1) HSP 1 Score: 223.4 bits (568), Expect = 5.5e-55 Identity = 127/133 (95.49%), Postives = 129/133 (96.99%), Query Frame = 0
BLAST of IVF0002397 vs. ExPASy TrEMBL
Match: A0A6J1DK32 (cyclin-dependent protein kinase inhibitor SMR9-like OS=Momordica charantia OX=3673 GN=LOC111021634 PE=4 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 5.0e-16 Identity = 69/134 (51.49%), Postives = 84/134 (62.69%), Query Frame = 0
BLAST of IVF0002397 vs. ExPASy TrEMBL
Match: A0A7N2KKU1 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 1.5e-12 Identity = 62/127 (48.82%), Postives = 75/127 (59.06%), Query Frame = 0
BLAST of IVF0002397 vs. ExPASy TrEMBL
Match: A0A7J9M5Q7 (Uncharacterized protein OS=Gossypium schwendimanii OX=34291 GN=Goshw_021036 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 4.4e-12 Identity = 58/136 (42.65%), Postives = 79/136 (58.09%), Query Frame = 0
BLAST of IVF0002397 vs. ExPASy TrEMBL
Match: A0A7J8XB55 (Uncharacterized protein OS=Gossypium aridum OX=34290 GN=Goari_025762 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 7.5e-12 Identity = 57/129 (44.19%), Postives = 80/129 (62.02%), Query Frame = 0
BLAST of IVF0002397 vs. NCBI nr
Match: KGN66487.1 (hypothetical protein Csa_006949 [Cucumis sativus]) HSP 1 Score: 221 bits (564), Expect = 4.13e-72 Identity = 127/133 (95.49%), Postives = 129/133 (96.99%), Query Frame = 0
BLAST of IVF0002397 vs. NCBI nr
Match: KAG6590203.1 (Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023854.1 Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 102 bits (253), Expect = 6.70e-25 Identity = 76/137 (55.47%), Postives = 94/137 (68.61%), Query Frame = 0
BLAST of IVF0002397 vs. NCBI nr
Match: XP_022154348.1 (cyclin-dependent protein kinase inhibitor SMR9-like [Momordica charantia]) HSP 1 Score: 98.6 bits (244), Expect = 1.58e-23 Identity = 51/61 (83.61%), Postives = 56/61 (91.80%), Query Frame = 0
BLAST of IVF0002397 vs. NCBI nr
Match: KAG7022087.1 (Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 94.7 bits (234), Expect = 5.73e-22 Identity = 71/139 (51.08%), Postives = 83/139 (59.71%), Query Frame = 0
BLAST of IVF0002397 vs. NCBI nr
Match: XP_023530358.1 (cyclin-dependent protein kinase inhibitor SMR9-like [Cucurbita pepo subsp. pepo] >KAG6588189.1 Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 94.4 bits (233), Expect = 8.34e-22 Identity = 71/140 (50.71%), Postives = 83/140 (59.29%), Query Frame = 0
BLAST of IVF0002397 vs. TAIR 10
Match: AT3G20898.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G51355.1); Has 66 Blast hits to 66 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 57.8 bits (138), Expect = 7.7e-09 Identity = 30/54 (55.56%), Postives = 39/54 (72.22%), Query Frame = 0
BLAST of IVF0002397 vs. TAIR 10
Match: AT1G51355.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20898.1); Has 52 Blast hits to 52 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 45.8 bits (107), Expect = 3.0e-05 Identity = 45/128 (35.16%), Postives = 66/128 (51.56%), Query Frame = 0
BLAST of IVF0002397 vs. TAIR 10
Match: AT5G40460.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27630.1); Has 87 Blast hits to 87 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 45.4 bits (106), Expect = 3.9e-05 Identity = 28/60 (46.67%), Postives = 34/60 (56.67%), Query Frame = 0
BLAST of IVF0002397 vs. TAIR 10
Match: AT1G60783.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 45.1 bits (105), Expect = 5.2e-05 Identity = 27/72 (37.50%), Postives = 39/72 (54.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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