IVF0002252 (gene) Melon (IVF77) v1

Overview


Name	IVF0002252
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	ethylene-responsive transcription factor ERF008
Location	chr11: 2894595 .. 2895279 (+)
RNA-Seq Expression	IVF0002252
Synteny	IVF0002252

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAATAAGAGAGAAAAAAAAAAAAATCTCTCAAAAACAAAGAAACAGAGAGACTTCCAATTCTCTCTGTTCTTAGAGAGAAAAGGAAAAATGAAAGACAAAAAGGAAGAGAGAAAATCAAAGCAATTCAAAGGGATAAGGATGAGAAAATGGGGAAAATGGGTTGCCGAAATTCGAGAACCCAATAAACGCTCTCGAATTTGGCTGGGTTCTTATTCCTCCCCCGTGGCTGCCGCCCGTGCTTACGACGCCGCCGTCTTCCACCTCCGTGGCCCCACCGCTCGCCTTAATTTCCCTGACTTTTTAACCACCACCGTTGACCGTGGTTCCTTCCCTCTCTCCGCCGCTGCTGTCCGCAAGATCGCTGCCGAAGTCGGCGCTCAGGTCGACGCCCTTGAGTCGTCGTCTCTCCCTCATTCTTCCGTCCAAAGTTGTTGTTCTCTCAACCCCACGAAGCTTCGTTGCTGTTCTTCTTGTTCAAGTGGGTTTTCCGATCGGGTGGACTTGAATAAATTTCCTGACCCGGAAGATTCCGATGGCGACTGCGTTAGTACTCATTGGACAAGCTGACAATTTTCCATAGGTTTATTTTTCGATCAAATATCAATTTTAGTTTCTTAAAACGTTTAATTATGGTCTAATTTTAGCTTTGCAGTACTCTCCATAAATCTAAATCCAAAACGTA

mRNA sequence

AGAAATAAGAGAGAAAAAAAAAAAAATCTCTCAAAAACAAAGAAACAGAGAGACTTCCAATTCTCTCTGTTCTTAGAGAGAAAAGGAAAAATGAAAGACAAAAAGGAAGAGAGAAAATCAAAGCAATTCAAAGGGATAAGGATGAGAAAATGGGGAAAATGGGTTGCCGAAATTCGAGAACCCAATAAACGCTCTCGAATTTGGCTGGGTTCTTATTCCTCCCCCGTGGCTGCCGCCCGTGCTTACGACGCCGCCGTCTTCCACCTCCGTGGCCCCACCGCTCGCCTTAATTTCCCTGACTTTTTAACCACCACCGTTGACCGTGGTTCCTTCCCTCTCTCCGCCGCTGCTGTCCGCAAGATCGCTGCCGAAGTCGGCGCTCAGGTCGACGCCCTTGAGTCGTCGTCTCTCCCTCATTCTTCCGTCCAAAGTTGTTGTTCTCTCAACCCCACGAAGCTTCGTTGCTGTTCTTCTTGTTCAAGTGGGTTTTCCGATCGGGTGGACTTGAATAAATTTCCTGACCCGGAAGATTCCGATGGCGACTGCGTTAGTACTCATTGGACAAGCTGACAATTTTCCATAGGTTTATTTTTCGATCAAATATCAATTTTAGTTTCTTAAAACGTTTAATTATGGTCTAATTTTAGCTTTGCAGTACTCTCCATAAATCTAAATCCAAAACGTA

Coding sequence (CDS)

ATGAAAGACAAAAAGGAAGAGAGAAAATCAAAGCAATTCAAAGGGATAAGGATGAGAAAATGGGGAAAATGGGTTGCCGAAATTCGAGAACCCAATAAACGCTCTCGAATTTGGCTGGGTTCTTATTCCTCCCCCGTGGCTGCCGCCCGTGCTTACGACGCCGCCGTCTTCCACCTCCGTGGCCCCACCGCTCGCCTTAATTTCCCTGACTTTTTAACCACCACCGTTGACCGTGGTTCCTTCCCTCTCTCCGCCGCTGCTGTCCGCAAGATCGCTGCCGAAGTCGGCGCTCAGGTCGACGCCCTTGAGTCGTCGTCTCTCCCTCATTCTTCCGTCCAAAGTTGTTGTTCTCTCAACCCCACGAAGCTTCGTTGCTGTTCTTCTTGTTCAAGTGGGTTTTCCGATCGGGTGGACTTGAATAAATTTCCTGACCCGGAAGATTCCGATGGCGACTGCGTTAGTACTCATTGGACAAGCTGA

Protein sequence

MKDKKEERKSKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLRGPTARLNFPDFLTTTVDRGSFPLSAAAVRKIAAEVGAQVDALESSSLPHSSVQSCCSLNPTKLRCCSSCSSGFSDRVDLNKFPDPEDSDGDCVSTHWTS

Homology

[Close]

BLAST of IVF0002252 vs. ExPASy Swiss-Prot
Match: O22174 (Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana OX=3702 GN=ERF008 PE=2 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.6e-37
Identity = 89/149 (59.73%), Postives = 109/149 (73.15%), Query Frame = 0


Query: 7   ERKSKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLRGPTARL 66
           +R  K +KGIRMRKWGKWVAEIREPNKRSRIWLGSY++P AAARAYD AVF+LRGP+ARL
Sbjct: 22  KRDLKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYATPEAAARAYDTAVFYLRGPSARL 81

Query: 67  NFPDFLT-TTVDRG---SFPLSAAAVRKIAAEVGAQVDALESSSLPHSSVQSCCSLNPTK 126
           NFP+ L   TV  G      LSAA +R+ AAEVGAQVDAL ++ + ++  ++       K
Sbjct: 82  NFPELLAGLTVSNGGGRGGDLSAAYIRRKAAEVGAQVDALGATVVVNTGGENRGDYE--K 141

Query: 127 LRCCSSCSSGFSDRVDLNKFPDPEDSDGD 152
           +  C    +G  +RVDLNK PDPE+SDGD
Sbjct: 142 IENCRKSGNGSLERVDLNKLPDPENSDGD 168

[Close]

BLAST of IVF0002252 vs. ExPASy Swiss-Prot
Match: Q9SW63 (Ethylene-responsive transcription factor RAP2-10 OS=Arabidopsis thaliana OX=3702 GN=RAP2-10 PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.2e-34
Identity = 92/172 (53.49%), Postives = 108/172 (62.79%), Query Frame = 0


Query: 8   RKSKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLRGPTARLN 67
           ++ K +KGIRMRKWGKWVAEIREPNKRSRIWLGSYS+P AAARAYD AVF+LRGP+ARLN
Sbjct: 25  KRDKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPEAAARAYDTAVFYLRGPSARLN 84

Query: 68  FPDFLT-TTVD-------RGSFPLSAAAVRKIAAEVGAQVDALESSSL------------ 127
           FP+ L   TV         G   +SAA +R+ AAEVGAQVDALE++              
Sbjct: 85  FPELLAGVTVTGGGGGGVNGGGDMSAAYIRRKAAEVGAQVDALEAAGAGGNRHHHHHQHQ 144

Query: 128 --PHSSV--QSCCSLNPTKLRCCS----SCSSGFSDRVDLNKFPDPEDSDGD 152
              H  V   S   +N   + C S       +G  +RVDLNK PDPE SD D
Sbjct: 145 RGNHDYVDNHSDYRINDDLMECSSKEGFKRCNGSLERVDLNKLPDPETSDDD 196

[Close]

BLAST of IVF0002252 vs. ExPASy Swiss-Prot
Match: Q9SNE1 (Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana OX=3702 GN=ERF011 PE=2 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 3.7e-34
Identity = 81/146 (55.48%), Postives = 100/146 (68.49%), Query Frame = 0


Query: 8   RKSKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLRGPTARLN 67
           ++ + FKGIRMRKWGKWVAEIREPNKRSR+WLGSYS+P AAARAYD AVF+LRGPTA LN
Sbjct: 16  KRERPFKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTATLN 75

Query: 68  FPDFLTTTVDRGSFPLSAAAVRKIAAEVGAQVDALESSSLPHSSVQSCCSLNPTKLRCCS 127
           FP+ L  T    +  +SAA +RK A EVGAQVDA+ ++ + ++  +   S          
Sbjct: 76  FPELLPCT---SAEDMSAATIRKKATEVGAQVDAIGATVVQNNKRRRVFSQK-------R 135

Query: 128 SCSSGFSDRVDLNKFPDPEDSDGDCV 154
               G  + VDLNK PDPE+ D D V
Sbjct: 136 DFGGGLLELVDLNKLPDPENLDDDLV 151

[Close]

BLAST of IVF0002252 vs. ExPASy Swiss-Prot
Match: Q9FH94 (Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana OX=3702 GN=ERF010 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.7e-31
Identity = 86/170 (50.59%), Postives = 102/170 (60.00%), Query Frame = 0


Query: 8   RKSKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLRGPTARLN 67
           ++ + +KGIRMRKWGKWVAEIREPNKRSR+WLGSYS+P AAARAYD AVF+LRGPTARLN
Sbjct: 16  KRDRPYKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTARLN 75

Query: 68  FPDFLTTTVDRGSFPLSAAAVRKIAAEVGAQVDALESSSLP------------------- 127
           FP+ L          +SAA +RK A EVGAQVDAL ++                      
Sbjct: 76  FPELLPGE-KFSDEDMSAATIRKKATEVGAQVDALGTAVQNNRHRVFGQNRDSDVDNKNF 135

Query: 128 HSSVQSCCSLNPTKLRCCSSCSSG--FSDRVDLNKFPDPEDSDGDCVSTH 157
           H + Q+       +        SG    DRVDLNK PDPE SD +  S H
Sbjct: 136 HRNYQNGEREEEEEDEDDKRLRSGGRLLDRVDLNKLPDPESSDEEWESKH 184

[Close]

BLAST of IVF0002252 vs. ExPASy Swiss-Prot
Match: Q8LC30 (Ethylene-responsive transcription factor RAP2-1 OS=Arabidopsis thaliana OX=3702 GN=RAP2-1 PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 8.0e-29
Identity = 66/102 (64.71%), Postives = 80/102 (78.43%), Query Frame = 0


Query: 11  KQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLRGPTARLNFPD 70
           K ++GIR RKWGKWVAEIREPNKRSR+WLGSY++ +AAARAYD AVF+LRGP+ARLNFPD
Sbjct: 29  KPYRGIRRRKWGKWVAEIREPNKRSRLWLGSYTTDIAAARAYDVAVFYLRGPSARLNFPD 88

Query: 71  FLTTTVDRGS----FPLSAAAVRKIAAEVGAQVDALESSSLP 109
            L    D  S      + AA +R+ AAEVGA+VDAL +S+ P
Sbjct: 89  LLLQEEDHLSAATTADMPAALIREKAAEVGARVDALLASAAP 130

[Close]

BLAST of IVF0002252 vs. ExPASy TrEMBL
Match: A0A5D3C946 (Ethylene-responsive transcription factor ERF008 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold30323G00010 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 9.0e-84
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MKDKKEERKSKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLR 60
           MKDKKEERKSKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLR
Sbjct: 1   MKDKKEERKSKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLR 60

Query: 61  GPTARLNFPDFLTTTVDRGSFPLSAAAVRKIAAEVGAQVDALESSSLPHSSVQSCCSLNP 120
           GPTARLNFPDFLTTTVDRGSFPLSAAAVRKIAAEVGAQVDALESSSLPHSSVQSCCSLNP
Sbjct: 61  GPTARLNFPDFLTTTVDRGSFPLSAAAVRKIAAEVGAQVDALESSSLPHSSVQSCCSLNP 120

Query: 121 TKLRCCSSCSSGFSDRVDLNKFPDPEDSDGDCVSTHWTS 160
           TKLRCCSSCSSGFSDRVDLNKFPDPEDSDGDCVSTHWTS
Sbjct: 121 TKLRCCSSCSSGFSDRVDLNKFPDPEDSDGDCVSTHWTS 159

[Close]

BLAST of IVF0002252 vs. ExPASy TrEMBL
Match: A0A1S3C5T2 (ethylene-responsive transcription factor ERF008 OS=Cucumis melo OX=3656 GN=LOC103497364 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 9.0e-84
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MKDKKEERKSKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLR 60
           MKDKKEERKSKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLR
Sbjct: 1   MKDKKEERKSKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLR 60

Query: 61  GPTARLNFPDFLTTTVDRGSFPLSAAAVRKIAAEVGAQVDALESSSLPHSSVQSCCSLNP 120
           GPTARLNFPDFLTTTVDRGSFPLSAAAVRKIAAEVGAQVDALESSSLPHSSVQSCCSLNP
Sbjct: 61  GPTARLNFPDFLTTTVDRGSFPLSAAAVRKIAAEVGAQVDALESSSLPHSSVQSCCSLNP 120

Query: 121 TKLRCCSSCSSGFSDRVDLNKFPDPEDSDGDCVSTHWTS 160
           TKLRCCSSCSSGFSDRVDLNKFPDPEDSDGDCVSTHWTS
Sbjct: 121 TKLRCCSSCSSGFSDRVDLNKFPDPEDSDGDCVSTHWTS 159

[Close]

BLAST of IVF0002252 vs. ExPASy TrEMBL
Match: A0A0A0LLV5 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G279260 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 5.5e-73
Identity = 151/161 (93.79%), Postives = 153/161 (95.03%), Query Frame = 0


Query: 1   MKDKKEERKSKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLR 60
           MKD+KEE+KSKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLR
Sbjct: 1   MKDRKEEKKSKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLR 60

Query: 61  GPTARLNFPDFLTTTVDR-GSFPLSAAAVRKIAAEVGAQVDALESSSLPHSSVQSCCSLN 120
           GPTARLNFPDFLTTTVDR  SFPLSAAAVRKIAAEVGAQVDALESS   HSS QS CSLN
Sbjct: 61  GPTARLNFPDFLTTTVDRASSFPLSAAAVRKIAAEVGAQVDALESSR-RHSSDQS-CSLN 120

Query: 121 PTKLRCCS-SCSSGFSDRVDLNKFPDPEDSDGDCVSTHWTS 160
           PTKLRCCS SCSSGFSDRVDLNKFPDPEDSDGDCVSTHWTS
Sbjct: 121 PTKLRCCSYSCSSGFSDRVDLNKFPDPEDSDGDCVSTHWTS 159

[Close]

BLAST of IVF0002252 vs. ExPASy TrEMBL
Match: A0A6J1G7I9 (ethylene-responsive transcription factor ERF011-like OS=Cucurbita moschata OX=3662 GN=LOC111451457 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 5.5e-49
Identity = 118/180 (65.56%), Postives = 127/180 (70.56%), Query Frame = 0


Query: 1   MKDKKEERK----SKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAV 60
           MK  +EER+    +K +KGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYD AV
Sbjct: 1   MKGGEEERRNRENTKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTAV 60

Query: 61  FHLRGPTARLNFPDFLTTTVDRGSFPL----SAAAVRKIAAEVGAQVDALESS------- 120
           FHLRGP+ARLNFPDF TT      FPL    SA+ VRKIAAEVGA+VDALESS       
Sbjct: 61  FHLRGPSARLNFPDFFTTAAADRPFPLPADISASTVRKIAAEVGARVDALESSLRHHFHN 120

Query: 121 --------SLPHSSVQSCCSLNPTKLRCCSSCSSGFSDRVDLNKFPDPEDSDGDCVSTHW 158
                     P  S  +  +  PTKLR   S S GFSDRVDLNK PDPEDSDGDC ST W
Sbjct: 121 CRTADQIHQTPSPSPATTTTTTPTKLR---SDSGGFSDRVDLNKLPDPEDSDGDCASTPW 177

[Close]

BLAST of IVF0002252 vs. ExPASy TrEMBL
Match: A0A6J1L6F3 (ethylene-responsive transcription factor ERF011-like OS=Cucurbita maxima OX=3661 GN=LOC111499605 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 2.3e-47
Identity = 118/179 (65.92%), Postives = 128/179 (71.51%), Query Frame = 0


Query: 1   MKDKKEERK----SKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAV 60
           MK  +EER+    +K +KGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYD AV
Sbjct: 1   MKGGEEERRNRENTKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTAV 60

Query: 61  FHLRGPTARLNFPDFLT--TTVDRG-SFP--LSAAAVRKIAAEVGAQVDALESSSLPH-- 120
           FHLRGP+ARLNFPDF T     DR   FP  +SA+ VRKIAAEVGA+VDALESS   H  
Sbjct: 61  FHLRGPSARLNFPDFFTAAAATDRPFPFPADISASTVRKIAAEVGARVDALESSLRHHFH 120

Query: 121 -----------SSVQSCCSLNPTKLRCCSSCSSGFSDRVDLNKFPDPEDSDGDCVSTHW 158
                       S+    +  PTKLR   S S GFSDRVDLNK PDPEDSDGDC ST W
Sbjct: 121 NCRTADQTHQTPSLSPTTTTTPTKLR---SDSGGFSDRVDLNKLPDPEDSDGDCASTPW 176

[Close]

BLAST of IVF0002252 vs. NCBI nr
Match: XP_008457742.1 (PREDICTED: ethylene-responsive transcription factor ERF008 [Cucumis melo] >KAA0045766.1 ethylene-responsive transcription factor ERF008 [Cucumis melo var. makuwa] >TYK08477.1 ethylene-responsive transcription factor ERF008 [Cucumis melo var. makuwa])

HSP 1 Score: 316 bits (810), Expect = 1.00e-108
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MKDKKEERKSKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLR 60
           MKDKKEERKSKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLR
Sbjct: 1   MKDKKEERKSKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLR 60

Query: 61  GPTARLNFPDFLTTTVDRGSFPLSAAAVRKIAAEVGAQVDALESSSLPHSSVQSCCSLNP 120
           GPTARLNFPDFLTTTVDRGSFPLSAAAVRKIAAEVGAQVDALESSSLPHSSVQSCCSLNP
Sbjct: 61  GPTARLNFPDFLTTTVDRGSFPLSAAAVRKIAAEVGAQVDALESSSLPHSSVQSCCSLNP 120

Query: 121 TKLRCCSSCSSGFSDRVDLNKFPDPEDSDGDCVSTHWTS 159
           TKLRCCSSCSSGFSDRVDLNKFPDPEDSDGDCVSTHWTS
Sbjct: 121 TKLRCCSSCSSGFSDRVDLNKFPDPEDSDGDCVSTHWTS 159

[Close]

BLAST of IVF0002252 vs. NCBI nr
Match: XP_004149688.1 (ethylene-responsive transcription factor ERF011 [Cucumis sativus] >KGN61989.1 hypothetical protein Csa_006520 [Cucumis sativus])

HSP 1 Score: 280 bits (717), Expect = 1.52e-94
Identity = 151/161 (93.79%), Postives = 153/161 (95.03%), Query Frame = 0


Query: 1   MKDKKEERKSKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLR 60
           MKD+KEE+KSKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLR
Sbjct: 1   MKDRKEEKKSKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLR 60

Query: 61  GPTARLNFPDFLTTTVDRGS-FPLSAAAVRKIAAEVGAQVDALESSSLPHSSVQSCCSLN 120
           GPTARLNFPDFLTTTVDR S FPLSAAAVRKIAAEVGAQVDALESS   HSS QSC SLN
Sbjct: 61  GPTARLNFPDFLTTTVDRASSFPLSAAAVRKIAAEVGAQVDALESSRR-HSSDQSC-SLN 120

Query: 121 PTKLRCCS-SCSSGFSDRVDLNKFPDPEDSDGDCVSTHWTS 159
           PTKLRCCS SCSSGFSDRVDLNKFPDPEDSDGDCVSTHWTS
Sbjct: 121 PTKLRCCSYSCSSGFSDRVDLNKFPDPEDSDGDCVSTHWTS 159

[Close]

BLAST of IVF0002252 vs. NCBI nr
Match: XP_038900860.1 (ethylene-responsive transcription factor ERF008-like [Benincasa hispida] >XP_038900861.1 ethylene-responsive transcription factor ERF008-like [Benincasa hispida])

HSP 1 Score: 223 bits (569), Expect = 4.42e-72
Identity = 131/160 (81.88%), Postives = 138/160 (86.25%), Query Frame = 0


Query: 1   MKDKKEERKS-KQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHL 60
           MK+K E++K  KQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHL
Sbjct: 1   MKEKNEDQKKLKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHL 60

Query: 61  RGPTARLNFPDFLTTTVDRGSFPLSAAAVRKIAAEVGAQVDALESSSLPHSSVQSCCSLN 120
           RGP+ARLNFPDF +T VDR SFPLSAAAVRKIAAEVGA+VDALE SSL H S  S  S  
Sbjct: 61  RGPSARLNFPDFFST-VDR-SFPLSAAAVRKIAAEVGARVDALE-SSLRHHSAHS--SDR 120

Query: 121 PTKLRCCSSCSSGFSDRVDLNKFPDPEDSDGDCVSTHWTS 159
            TKLR  SS SSGFSDRVDLNKFPDPEDSDGDC +T  TS
Sbjct: 121 TTKLR--SSSSSGFSDRVDLNKFPDPEDSDGDCATTPCTS 153

[Close]

BLAST of IVF0002252 vs. NCBI nr
Match: XP_022947660.1 (ethylene-responsive transcription factor ERF011-like [Cucurbita moschata])

HSP 1 Score: 201 bits (510), Expect = 9.87e-63
Identity = 117/180 (65.00%), Postives = 128/180 (71.11%), Query Frame = 0


Query: 1   MKDKKEERKSKQ----FKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAV 60
           MK  +EER++++    +KGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYD AV
Sbjct: 1   MKGGEEERRNRENTKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTAV 60

Query: 61  FHLRGPTARLNFPDFLTTTVDRGSFPL----SAAAVRKIAAEVGAQVDALESS------- 120
           FHLRGP+ARLNFPDF TT      FPL    SA+ VRKIAAEVGA+VDALESS       
Sbjct: 61  FHLRGPSARLNFPDFFTTAAADRPFPLPADISASTVRKIAAEVGARVDALESSLRHHFHN 120

Query: 121 --------SLPHSSVQSCCSLNPTKLRCCSSCSSGFSDRVDLNKFPDPEDSDGDCVSTHW 157
                     P  S  +  +  PTKLR   S S GFSDRVDLNK PDPEDSDGDC ST W
Sbjct: 121 CRTADQIHQTPSPSPATTTTTTPTKLR---SDSGGFSDRVDLNKLPDPEDSDGDCASTPW 177

[Close]

BLAST of IVF0002252 vs. NCBI nr
Match: KAG6605215.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035189.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 201 bits (510), Expect = 9.87e-63
Identity = 117/180 (65.00%), Postives = 128/180 (71.11%), Query Frame = 0


Query: 1   MKDKKEERKSKQ----FKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAV 60
           MK  +EER++++    +KGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYD AV
Sbjct: 1   MKGGEEERRNRENTKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDTAV 60

Query: 61  FHLRGPTARLNFPDFLTTTVDRGSFPL----SAAAVRKIAAEVGAQVDALESS------- 120
           FHLRGP+ARLNFPDF TT      FPL    SA+ VRKIAAEVGA+VDALESS       
Sbjct: 61  FHLRGPSARLNFPDFFTTAAADRPFPLPADISASTVRKIAAEVGARVDALESSLRHHFHN 120

Query: 121 --------SLPHSSVQSCCSLNPTKLRCCSSCSSGFSDRVDLNKFPDPEDSDGDCVSTHW 157
                     P  S  +  +  PTKLR   S S GFSDRVDLNK PDPEDSDGDC ST W
Sbjct: 121 CRTADQTHQTPSPSPATTTTTTPTKLR---SDSGGFSDRVDLNKLPDPEDSDGDCASTPW 177

[Close]

BLAST of IVF0002252 vs. TAIR 10
Match: AT2G23340.1 (DREB and EAR motif protein 3 )

HSP 1 Score: 157.1 bits (396), Expect = 1.1e-38
Identity = 89/149 (59.73%), Postives = 109/149 (73.15%), Query Frame = 0


Query: 7   ERKSKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLRGPTARL 66
           +R  K +KGIRMRKWGKWVAEIREPNKRSRIWLGSY++P AAARAYD AVF+LRGP+ARL
Sbjct: 22  KRDLKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYATPEAAARAYDTAVFYLRGPSARL 81

Query: 67  NFPDFLT-TTVDRG---SFPLSAAAVRKIAAEVGAQVDALESSSLPHSSVQSCCSLNPTK 126
           NFP+ L   TV  G      LSAA +R+ AAEVGAQVDAL ++ + ++  ++       K
Sbjct: 82  NFPELLAGLTVSNGGGRGGDLSAAYIRRKAAEVGAQVDALGATVVVNTGGENRGDYE--K 141

Query: 127 LRCCSSCSSGFSDRVDLNKFPDPEDSDGD 152
           +  C    +G  +RVDLNK PDPE+SDGD
Sbjct: 142 IENCRKSGNGSLERVDLNKLPDPENSDGD 168

[Close]

BLAST of IVF0002252 vs. TAIR 10
Match: AT4G36900.1 (related to AP2 10 )

HSP 1 Score: 146.7 bits (369), Expect = 1.5e-35
Identity = 92/172 (53.49%), Postives = 108/172 (62.79%), Query Frame = 0


Query: 8   RKSKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLRGPTARLN 67
           ++ K +KGIRMRKWGKWVAEIREPNKRSRIWLGSYS+P AAARAYD AVF+LRGP+ARLN
Sbjct: 25  KRDKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPEAAARAYDTAVFYLRGPSARLN 84

Query: 68  FPDFLT-TTVD-------RGSFPLSAAAVRKIAAEVGAQVDALESSSL------------ 127
           FP+ L   TV         G   +SAA +R+ AAEVGAQVDALE++              
Sbjct: 85  FPELLAGVTVTGGGGGGVNGGGDMSAAYIRRKAAEVGAQVDALEAAGAGGNRHHHHHQHQ 144

Query: 128 --PHSSV--QSCCSLNPTKLRCCS----SCSSGFSDRVDLNKFPDPEDSDGD 152
              H  V   S   +N   + C S       +G  +RVDLNK PDPE SD D
Sbjct: 145 RGNHDYVDNHSDYRINDDLMECSSKEGFKRCNGSLERVDLNKLPDPETSDDD 196

[Close]

BLAST of IVF0002252 vs. TAIR 10
Match: AT3G50260.1 (cooperatively regulated by ethylene and jasmonate 1 )

HSP 1 Score: 146.0 bits (367), Expect = 2.6e-35
Identity = 81/146 (55.48%), Postives = 100/146 (68.49%), Query Frame = 0


Query: 8   RKSKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLRGPTARLN 67
           ++ + FKGIRMRKWGKWVAEIREPNKRSR+WLGSYS+P AAARAYD AVF+LRGPTA LN
Sbjct: 16  KRERPFKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTATLN 75

Query: 68  FPDFLTTTVDRGSFPLSAAAVRKIAAEVGAQVDALESSSLPHSSVQSCCSLNPTKLRCCS 127
           FP+ L  T    +  +SAA +RK A EVGAQVDA+ ++ + ++  +   S          
Sbjct: 76  FPELLPCT---SAEDMSAATIRKKATEVGAQVDAIGATVVQNNKRRRVFSQK-------R 135

Query: 128 SCSSGFSDRVDLNKFPDPEDSDGDCV 154
               G  + VDLNK PDPE+ D D V
Sbjct: 136 DFGGGLLELVDLNKLPDPENLDDDLV 151

[Close]

BLAST of IVF0002252 vs. TAIR 10
Match: AT5G67190.1 (DREB and EAR motif protein 2 )

HSP 1 Score: 137.1 bits (344), Expect = 1.2e-32
Identity = 86/170 (50.59%), Postives = 102/170 (60.00%), Query Frame = 0


Query: 8   RKSKQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLRGPTARLN 67
           ++ + +KGIRMRKWGKWVAEIREPNKRSR+WLGSYS+P AAARAYD AVF+LRGPTARLN
Sbjct: 16  KRDRPYKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTARLN 75

Query: 68  FPDFLTTTVDRGSFPLSAAAVRKIAAEVGAQVDALESSSLP------------------- 127
           FP+ L          +SAA +RK A EVGAQVDAL ++                      
Sbjct: 76  FPELLPGE-KFSDEDMSAATIRKKATEVGAQVDALGTAVQNNRHRVFGQNRDSDVDNKNF 135

Query: 128 HSSVQSCCSLNPTKLRCCSSCSSG--FSDRVDLNKFPDPEDSDGDCVSTH 157
           H + Q+       +        SG    DRVDLNK PDPE SD +  S H
Sbjct: 136 HRNYQNGEREEEEEDEDDKRLRSGGRLLDRVDLNKLPDPESSDEEWESKH 184

[Close]

BLAST of IVF0002252 vs. TAIR 10
Match: AT1G46768.1 (related to AP2 1 )

HSP 1 Score: 128.3 bits (321), Expect = 5.7e-30
Identity = 66/102 (64.71%), Postives = 80/102 (78.43%), Query Frame = 0


Query: 11  KQFKGIRMRKWGKWVAEIREPNKRSRIWLGSYSSPVAAARAYDAAVFHLRGPTARLNFPD 70
           K ++GIR RKWGKWVAEIREPNKRSR+WLGSY++ +AAARAYD AVF+LRGP+ARLNFPD
Sbjct: 29  KPYRGIRRRKWGKWVAEIREPNKRSRLWLGSYTTDIAAARAYDVAVFYLRGPSARLNFPD 88

Query: 71  FLTTTVDRGS----FPLSAAAVRKIAAEVGAQVDALESSSLP 109
            L    D  S      + AA +R+ AAEVGA+VDAL +S+ P
Sbjct: 89  LLLQEEDHLSAATTADMPAALIREKAAEVGARVDALLASAAP 130

The following BLAST results are available for this feature:

BLAST of IVF0002252 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22174	1.6e-37	59.73	Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SW63	2.2e-34	53.49	Ethylene-responsive transcription factor RAP2-10 OS=Arabidopsis thaliana OX=3702...	[more]
Q9SNE1	3.7e-34	55.48	Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9FH94	1.7e-31	50.59	Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8LC30	8.0e-29	64.71	Ethylene-responsive transcription factor RAP2-1 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of IVF0002252 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C946	9.0e-84	100.00	Ethylene-responsive transcription factor ERF008 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3C5T2	9.0e-84	100.00	ethylene-responsive transcription factor ERF008 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0LLV5	5.5e-73	93.79	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G279260 PE=...	[more]
A0A6J1G7I9	5.5e-49	65.56	ethylene-responsive transcription factor ERF011-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1L6F3	2.3e-47	65.92	ethylene-responsive transcription factor ERF011-like OS=Cucurbita maxima OX=3661...	[more]

BLAST of IVF0002252 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457742.1	1.00e-108	100.00	PREDICTED: ethylene-responsive transcription factor ERF008 [Cucumis melo] >KAA00...	[more]
XP_004149688.1	1.52e-94	93.79	ethylene-responsive transcription factor ERF011 [Cucumis sativus] >KGN61989.1 hy...	[more]
XP_038900860.1	4.42e-72	81.88	ethylene-responsive transcription factor ERF008-like [Benincasa hispida] >XP_038...	[more]
XP_022947660.1	9.87e-63	65.00	ethylene-responsive transcription factor ERF011-like [Cucurbita moschata]	[more]
KAG6605215.1	9.87e-63	65.00	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]

BLAST of IVF0002252 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G23340.1	1.1e-38	59.73	DREB and EAR motif protein 3	[more]
AT4G36900.1	1.5e-35	53.49	related to AP2 10	[more]
AT3G50260.1	2.6e-35	55.48	cooperatively regulated by ethylene and jasmonate 1	[more]
AT5G67190.1	1.2e-32	50.59	DREB and EAR motif protein 2	[more]
AT1G46768.1	5.7e-30	64.71	related to AP2 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 13..24 score: 50.61 coord: 51..71 score: 51.08
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 12..75 e-value: 3.7E-33 score: 126.2
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 12..61 e-value: 3.1E-11 score: 43.3
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 12..69 score: 21.561787
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 11..70 e-value: 1.57818E-19 score: 75.3859
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 11..70 e-value: 2.0E-24 score: 87.5
None	No IPR available	PANTHER	PTHR31729:SF0	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-10	coord: 5..149
None	No IPR available	PANTHER	PTHR31729	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED	coord: 5..149
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 12..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0002252.1	IVF0002252.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity