IVF0002179 (gene) Melon (IVF77) v1

Overview


Name	IVF0002179
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Retrotransposon protein
Location	chr04: 13763647 .. 13764375 (-)
RNA-Seq Expression	IVF0002179
Synteny	IVF0002179

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGAAAAATTACCTGGCTTTCGTGTCCACGCAACCACTGTAATCGATCATAAAATAAAAACGCTTAAGCAGACATTCCACGTCATCGCAGAAATGCAGGGGCCAACGTGTAGTGGGTTCGACTGGAACGATGACGAAAAATGCACAATTGCAAAGAAGGAAGTCTTCGATAACTGTGTTAGGGTAAGGAAAATAGTCTAAACATCACATTACCTTGTGCAGTGTACATTTACTTCACAATTTTCATATCATTAGTTTTGAGTGGTCTTGTTCTTTATGCAGTCGCATCCTGCAACGAAGAGACTCTTTAACAAACTCTTTCCCTATTACGACGAACTTGCATATGTGTTCGATCACGATAAGACAACGGGTCGCTTCGTTAAGACATTCGTGGACGTCGGGTCTAACGAACCTACTGAGTATAAGGGATTTGACATGTCAGATGGGAACGAGGAGTTCCTATCCTTGTACAACCAGGGAACTGACATGTCCCAGAAGGATGTACGCGCATTACGACCTGCTCGCACGTCAGACGGTAGGGTCGGATTGAGCAGATCGAAGAGAAAGAGGGGAAGCCAGCGGGAGAGTGAGCTTGAAGTCATAAATATGGTCCTCGAGTGTACGAATGACCAACTCAGGATGATTGCCGAGTGGCCTGCATACGCCCTTGCCAATGACACCCATGTGCACCAGGAATTCTTACATCTATTGCATGAGATACCGTAA

mRNA sequence

ATGGCCGAAAAATTACCTGGCTTTCGTGTCCACGCAACCACTGTAATCGATCATAAAATAAAAACGCTTAAGCAGACATTCCACGTCATCGCAGAAATGCAGGGGCCAACGTGTAGTGGGTTCGACTGGAACGATGACGAAAAATGCACAATTGCAAAGAAGGAAGTCTTCGATAACTGTGTTAGGTCGCATCCTGCAACGAAGAGACTCTTTAACAAACTCTTTCCCTATTACGACGAACTTGCATATGTGTTCGATCACGATAAGACAACGGGTCGCTTCGTTAAGACATTCGTGGACGTCGGGTCTAACGAACCTACTGAGTATAAGGGATTTGACATGTCAGATGGGAACGAGGAGTTCCTATCCTTGTACAACCAGGGAACTGACATGTCCCAGAAGGATGTACGCGCATTACGACCTGCTCGCACGTCAGACGGTAGGGTCGGATTGAGCAGATCGAAGAGAAAGAGGGGAAGCCAGCGGGAGAGTGAGCTTGAAGTCATAAATATGGTCCTCGAGTGTACGAATGACCAACTCAGGATGATTGCCGAGTGGCCTGCATACGCCCTTGCCAATGACACCCATGTGCACCAGGAATTCTTACATCTATTGCATGAGATACCGTAA

Coding sequence (CDS)

ATGGCCGAAAAATTACCTGGCTTTCGTGTCCACGCAACCACTGTAATCGATCATAAAATAAAAACGCTTAAGCAGACATTCCACGTCATCGCAGAAATGCAGGGGCCAACGTGTAGTGGGTTCGACTGGAACGATGACGAAAAATGCACAATTGCAAAGAAGGAAGTCTTCGATAACTGTGTTAGGTCGCATCCTGCAACGAAGAGACTCTTTAACAAACTCTTTCCCTATTACGACGAACTTGCATATGTGTTCGATCACGATAAGACAACGGGTCGCTTCGTTAAGACATTCGTGGACGTCGGGTCTAACGAACCTACTGAGTATAAGGGATTTGACATGTCAGATGGGAACGAGGAGTTCCTATCCTTGTACAACCAGGGAACTGACATGTCCCAGAAGGATGTACGCGCATTACGACCTGCTCGCACGTCAGACGGTAGGGTCGGATTGAGCAGATCGAAGAGAAAGAGGGGAAGCCAGCGGGAGAGTGAGCTTGAAGTCATAAATATGGTCCTCGAGTGTACGAATGACCAACTCAGGATGATTGCCGAGTGGCCTGCATACGCCCTTGCCAATGACACCCATGTGCACCAGGAATTCTTACATCTATTGCATGAGATACCGTAA

Protein sequence

MAEKLPGFRVHATTVIDHKIKTLKQTFHVIAEMQGPTCSGFDWNDDEKCTIAKKEVFDNCVRSHPATKRLFNKLFPYYDELAYVFDHDKTTGRFVKTFVDVGSNEPTEYKGFDMSDGNEEFLSLYNQGTDMSQKDVRALRPARTSDGRVGLSRSKRKRGSQRESELEVINMVLECTNDQLRMIAEWPAYALANDTHVHQEFLHLLHEIP

Homology

[Close]

BLAST of IVF0002179 vs. ExPASy TrEMBL
Match: A0A5A7T3Q2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G003130 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 2.0e-99
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 32  EMQGPTCSGFDWNDDEKCTIAKKEVFDNCVRSHPATKRLFNKLFPYYDELAYVFDHDKTT 91
           EMQGPTCSGFDWNDDEKCTIAKKEVFDNCVRSHPATKRLFNKLFPYYDELAYVFDHDKTT
Sbjct: 38  EMQGPTCSGFDWNDDEKCTIAKKEVFDNCVRSHPATKRLFNKLFPYYDELAYVFDHDKTT 97

Query: 92  GRFVKTFVDVGSNEPTEYKGFDMSDGNEEFLSLYNQGTDMSQKDVRALRPARTSDGRVGL 151
           GRFVKTFVDVGSNEPTEYKGFDMSDGNEEFLSLYNQGTDMSQKDVRALRPARTSDGRVGL
Sbjct: 98  GRFVKTFVDVGSNEPTEYKGFDMSDGNEEFLSLYNQGTDMSQKDVRALRPARTSDGRVGL 157

Query: 152 SRSKRKRGSQRESELEVINMVLECTNDQLRMIAEWPAYALANDTHVHQEFLHLLHEIP 210
           SRSKRKRGSQRESELEVINMVLECTNDQLRMIAEWPAYALANDTHVHQEFLHLLHEIP
Sbjct: 158 SRSKRKRGSQRESELEVINMVLECTNDQLRMIAEWPAYALANDTHVHQEFLHLLHEIP 215

[Close]

BLAST of IVF0002179 vs. ExPASy TrEMBL
Match: A0A5D3DAC5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00880 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 7.6e-99
Identity = 177/178 (99.44%), Postives = 177/178 (99.44%), Query Frame = 0


Query: 32  EMQGPTCSGFDWNDDEKCTIAKKEVFDNCVRSHPATKRLFNKLFPYYDELAYVFDHDKTT 91
           EMQGPTCSGFDWNDDEKCTIAKKEVFDNCVRSHPATKRLFNKLFPYYDELAYVFDHDKTT
Sbjct: 38  EMQGPTCSGFDWNDDEKCTIAKKEVFDNCVRSHPATKRLFNKLFPYYDELAYVFDHDKTT 97

Query: 92  GRFVKTFVDVGSNEPTEYKGFDMSDGNEEFLSLYNQGTDMSQKDVRALRPARTSDGRVGL 151
           GRFVKTFVDVGSNEPTEYKGFDMSDGNEEFLSLYNQGTDMSQKDVRALRPA TSDGRVGL
Sbjct: 98  GRFVKTFVDVGSNEPTEYKGFDMSDGNEEFLSLYNQGTDMSQKDVRALRPAHTSDGRVGL 157

Query: 152 SRSKRKRGSQRESELEVINMVLECTNDQLRMIAEWPAYALANDTHVHQEFLHLLHEIP 210
           SRSKRKRGSQRESELEVINMVLECTNDQLRMIAEWPAYALANDTHVHQEFLHLLHEIP
Sbjct: 158 SRSKRKRGSQRESELEVINMVLECTNDQLRMIAEWPAYALANDTHVHQEFLHLLHEIP 215

[Close]

BLAST of IVF0002179 vs. ExPASy TrEMBL
Match: A0A5A7UR77 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold497G00880 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 2.0e-75
Identity = 142/210 (67.62%), Postives = 165/210 (78.57%), Query Frame = 0


Query: 1   MAEKLPGFRVHATTVIDHKIKTLKQTFHVIAEMQGPTCSGFDWNDDEKCTIAKKEVFDNC 60
           MAEKLPG +V ATTVID +IKTLK+TF  IAEM+GP CSGF WND+EKC +A+KE+FDN 
Sbjct: 1   MAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNW 60

Query: 61  VRSHPATKRLFNKLFPYYDELAYVFDHDKTTGRFVKTFVDVGSNEP-TEYKGFDMSDGNE 120
           VRSHPA K L NK FPYYDEL YVF  D+ TGRF +TF DVGSNEP   Y  FDM DGNE
Sbjct: 61  VRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNE 120

Query: 121 EFLSLYNQGTDMSQKDVRALRPARTSDGRVGLSRSKRKRGSQRESELEVINMVLECTNDQ 180
           +FL +Y+QG D+SQ DVRA RP+R S+GR G S SKRKRGSQR+ ELE I++ L+ TN+Q
Sbjct: 121 DFLPVYSQGIDLSQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFELEAIHLALDQTNEQ 180

Query: 181 LRMIAEWPAYALANDTHVHQEFLHLLHEIP 210
           LR IAEWPA  LAND HV  EF H+L E+P
Sbjct: 181 LRQIAEWPARNLANDNHVRTEFFHILREMP 210

[Close]

BLAST of IVF0002179 vs. ExPASy TrEMBL
Match: A0A5A7V4T0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G00820 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 4.5e-75
Identity = 142/210 (67.62%), Postives = 165/210 (78.57%), Query Frame = 0


Query: 1   MAEKLPGFRVHATTVIDHKIKTLKQTFHVIAEMQGPTCSGFDWNDDEKCTIAKKEVFDNC 60
           MAEKLPG +V ATTVID +IKTLK+TF  IAEM+GP CSGF WND+EKC +A+KE+FDN 
Sbjct: 28  MAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNW 87

Query: 61  VRSHPATKRLFNKLFPYYDELAYVFDHDKTTGRFVKTFVDVGSNEP-TEYKGFDMSDGNE 120
           VRSHPA K L NK FPYYDEL YVF  D+ TGRF +TF DVGSNEP   Y  FDM DGNE
Sbjct: 88  VRSHPAVKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNE 147

Query: 121 EFLSLYNQGTDMSQKDVRALRPARTSDGRVGLSRSKRKRGSQRESELEVINMVLECTNDQ 180
           +F S+Y+QG D+SQ DVRA RP+R S+GR G SRSKRKRGSQR+ ELE I++ L+ TN+Q
Sbjct: 148 DFPSVYSQGVDISQDDVRASRPSRASEGRTGSSRSKRKRGSQRDFELEAIHLALDQTNEQ 207

Query: 181 LRMIAEWPAYALANDTHVHQEFLHLLHEIP 210
           LR IAEWPA  LAND HV  EF  +L E+P
Sbjct: 208 LRQIAEWPARNLANDNHVRTEFFRILREMP 237

[Close]

BLAST of IVF0002179 vs. ExPASy TrEMBL
Match: A0A5D3DBP2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold328G00100 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.7e-74
Identity = 141/210 (67.14%), Postives = 164/210 (78.10%), Query Frame = 0


Query: 1   MAEKLPGFRVHATTVIDHKIKTLKQTFHVIAEMQGPTCSGFDWNDDEKCTIAKKEVFDNC 60
           MAEKLPG +V ATTVID +IKTLK+TF  IAEM+GP CSGF WND+EKC +A+KE+FDN 
Sbjct: 52  MAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNW 111

Query: 61  VRSHPATKRLFNKLFPYYDELAYVFDHDKTTGRFVKTFVDVGSNEP-TEYKGFDMSDGNE 120
           VRSHPA K L NK F YYDEL YVF  D+ TGRF +TF DVGSNEP   Y  FDM DGNE
Sbjct: 112 VRSHPAAKGLLNKPFSYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNE 171

Query: 121 EFLSLYNQGTDMSQKDVRALRPARTSDGRVGLSRSKRKRGSQRESELEVINMVLECTNDQ 180
           +FL +Y+QG D+SQ DVRA RP+R S+GR G S SKRKRGSQR+ ELE I++ L+ TN+Q
Sbjct: 172 DFLPVYSQGIDLSQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFELEAIHLALDQTNEQ 231

Query: 181 LRMIAEWPAYALANDTHVHQEFLHLLHEIP 210
           LR IAEWPA  LAND HV  EF H+L E+P
Sbjct: 232 LRQIAEWPARNLANDNHVRTEFFHILREMP 261

[Close]

BLAST of IVF0002179 vs. NCBI nr
Match: KAA0038094.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 368 bits (945), Expect = 1.43e-127
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 32  EMQGPTCSGFDWNDDEKCTIAKKEVFDNCVRSHPATKRLFNKLFPYYDELAYVFDHDKTT 91
           EMQGPTCSGFDWNDDEKCTIAKKEVFDNCVRSHPATKRLFNKLFPYYDELAYVFDHDKTT
Sbjct: 38  EMQGPTCSGFDWNDDEKCTIAKKEVFDNCVRSHPATKRLFNKLFPYYDELAYVFDHDKTT 97

Query: 92  GRFVKTFVDVGSNEPTEYKGFDMSDGNEEFLSLYNQGTDMSQKDVRALRPARTSDGRVGL 151
           GRFVKTFVDVGSNEPTEYKGFDMSDGNEEFLSLYNQGTDMSQKDVRALRPARTSDGRVGL
Sbjct: 98  GRFVKTFVDVGSNEPTEYKGFDMSDGNEEFLSLYNQGTDMSQKDVRALRPARTSDGRVGL 157

Query: 152 SRSKRKRGSQRESELEVINMVLECTNDQLRMIAEWPAYALANDTHVHQEFLHLLHEIP 209
           SRSKRKRGSQRESELEVINMVLECTNDQLRMIAEWPAYALANDTHVHQEFLHLLHEIP
Sbjct: 158 SRSKRKRGSQRESELEVINMVLECTNDQLRMIAEWPAYALANDTHVHQEFLHLLHEIP 215

[Close]

BLAST of IVF0002179 vs. NCBI nr
Match: TYK20513.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 366 bits (940), Expect = 8.27e-127
Identity = 177/178 (99.44%), Postives = 177/178 (99.44%), Query Frame = 0


Query: 32  EMQGPTCSGFDWNDDEKCTIAKKEVFDNCVRSHPATKRLFNKLFPYYDELAYVFDHDKTT 91
           EMQGPTCSGFDWNDDEKCTIAKKEVFDNCVRSHPATKRLFNKLFPYYDELAYVFDHDKTT
Sbjct: 38  EMQGPTCSGFDWNDDEKCTIAKKEVFDNCVRSHPATKRLFNKLFPYYDELAYVFDHDKTT 97

Query: 92  GRFVKTFVDVGSNEPTEYKGFDMSDGNEEFLSLYNQGTDMSQKDVRALRPARTSDGRVGL 151
           GRFVKTFVDVGSNEPTEYKGFDMSDGNEEFLSLYNQGTDMSQKDVRALRPA TSDGRVGL
Sbjct: 98  GRFVKTFVDVGSNEPTEYKGFDMSDGNEEFLSLYNQGTDMSQKDVRALRPAHTSDGRVGL 157

Query: 152 SRSKRKRGSQRESELEVINMVLECTNDQLRMIAEWPAYALANDTHVHQEFLHLLHEIP 209
           SRSKRKRGSQRESELEVINMVLECTNDQLRMIAEWPAYALANDTHVHQEFLHLLHEIP
Sbjct: 158 SRSKRKRGSQRESELEVINMVLECTNDQLRMIAEWPAYALANDTHVHQEFLHLLHEIP 215

[Close]

BLAST of IVF0002179 vs. NCBI nr
Match: KAA0057610.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 288 bits (736), Expect = 3.75e-95
Identity = 142/210 (67.62%), Postives = 165/210 (78.57%), Query Frame = 0


Query: 1   MAEKLPGFRVHATTVIDHKIKTLKQTFHVIAEMQGPTCSGFDWNDDEKCTIAKKEVFDNC 60
           MAEKLPG +V ATTVID +IKTLK+TF  IAEM+GP CSGF WND+EKC +A+KE+FDN 
Sbjct: 1   MAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNW 60

Query: 61  VRSHPATKRLFNKLFPYYDELAYVFDHDKTTGRFVKTFVDVGSNEPTE-YKGFDMSDGNE 120
           VRSHPA K L NK FPYYDEL YVF  D+ TGRF +TF DVGSNEP   Y  FDM DGNE
Sbjct: 61  VRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNE 120

Query: 121 EFLSLYNQGTDMSQKDVRALRPARTSDGRVGLSRSKRKRGSQRESELEVINMVLECTNDQ 180
           +FL +Y+QG D+SQ DVRA RP+R S+GR G S SKRKRGSQR+ ELE I++ L+ TN+Q
Sbjct: 121 DFLPVYSQGIDLSQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFELEAIHLALDQTNEQ 180

Query: 181 LRMIAEWPAYALANDTHVHQEFLHLLHEIP 209
           LR IAEWPA  LAND HV  EF H+L E+P
Sbjct: 181 LRQIAEWPARNLANDNHVRTEFFHILREMP 210

[Close]

BLAST of IVF0002179 vs. NCBI nr
Match: KAA0062588.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 286 bits (733), Expect = 2.64e-94
Identity = 142/210 (67.62%), Postives = 165/210 (78.57%), Query Frame = 0


Query: 1   MAEKLPGFRVHATTVIDHKIKTLKQTFHVIAEMQGPTCSGFDWNDDEKCTIAKKEVFDNC 60
           MAEKLPG +V ATTVID +IKTLK+TF  IAEM+GP CSGF WND+EKC +A+KE+FDN 
Sbjct: 28  MAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNW 87

Query: 61  VRSHPATKRLFNKLFPYYDELAYVFDHDKTTGRFVKTFVDVGSNEPTE-YKGFDMSDGNE 120
           VRSHPA K L NK FPYYDEL YVF  D+ TGRF +TF DVGSNEP   Y  FDM DGNE
Sbjct: 88  VRSHPAVKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNE 147

Query: 121 EFLSLYNQGTDMSQKDVRALRPARTSDGRVGLSRSKRKRGSQRESELEVINMVLECTNDQ 180
           +F S+Y+QG D+SQ DVRA RP+R S+GR G SRSKRKRGSQR+ ELE I++ L+ TN+Q
Sbjct: 148 DFPSVYSQGVDISQDDVRASRPSRASEGRTGSSRSKRKRGSQRDFELEAIHLALDQTNEQ 207

Query: 181 LRMIAEWPAYALANDTHVHQEFLHLLHEIP 209
           LR IAEWPA  LAND HV  EF  +L E+P
Sbjct: 208 LRQIAEWPARNLANDNHVRTEFFRILREMP 237

[Close]

BLAST of IVF0002179 vs. NCBI nr
Match: TYK10915.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK15088.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 282 bits (721), Expect = 7.39e-93
Identity = 140/210 (66.67%), Postives = 163/210 (77.62%), Query Frame = 0


Query: 1   MAEKLPGFRVHATTVIDHKIKTLKQTFHVIAEMQGPTCSGFDWNDDEKCTIAKKEVFDNC 60
           MAEKLPG +V ATTVID +IKTLK+TF  IAEM+GP CSGF WND+EKC +A+KE+FDN 
Sbjct: 2   MAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNW 61

Query: 61  VRSHPATKRLFNKLFPYYDELAYVFDHDKTTGRFVKTFVDVGSNEPTE-YKGFDMSDGNE 120
           VRSHPA K L NK FPYYDEL YVF  D+ TGRF +TF DVGSNEP   Y  FDM DGNE
Sbjct: 62  VRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNE 121

Query: 121 EFLSLYNQGTDMSQKDVRALRPARTSDGRVGLSRSKRKRGSQRESELEVINMVLECTNDQ 180
           +F  +Y+QG D+SQ DVRA RP+R S+GR G S SKRKRGSQR+ ELE I++ L+ TN+Q
Sbjct: 122 DFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFELEAIHLALDQTNEQ 181

Query: 181 LRMIAEWPAYALANDTHVHQEFLHLLHEIP 209
           LR IAEWPA  LAND HV  EF  +L E+P
Sbjct: 182 LRQIAEWPARNLANDNHVRTEFFRILREMP 211

The following BLAST results are available for this feature:

BLAST of IVF0002179 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0002179 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T3Q2	2.0e-99	100.00	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DAC5	7.6e-99	99.44	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UR77	2.0e-75	67.62	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7V4T0	4.5e-75	67.62	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DBP2	1.7e-74	67.14	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of IVF0002179 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0038094.1	1.43e-127	100.00	retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK20513.1	8.27e-127	99.44	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0057610.1	3.75e-95	67.62	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0062588.1	2.64e-94	67.62	retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK10915.1	7.39e-93	66.67	retrotransposon protein [Cucumis melo var. makuwa] >TYK15088.1 retrotransposon p...	[more]

BLAST of IVF0002179 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..162
None	No IPR available	PANTHER	PTHR46250	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED	coord: 1..183

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0002179.1	IVF0002179.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane