IVF0002094 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCTTCTCGTATCATCTGCTTTGCTCTTATTTTTTCAAGTTCGTTTCCTTTTATTTCTCCCCCAAATACTATATTATCATGTGTTTCAAAATCAAATAATTATGAGACATATTAGAATATTGCTAAATTTGTATATTTATCTTTTTATGTTTTTGTATATAGTTGTATGATCTTGGTACCTCGAGACGTCTTAGCTGCCAAAAGATGTCAAGACGTTTTATATAACACTGGGTGCTCTCTCAATGACTGTGGAAAGAAATGTTGGGATAAGCATCATACTATTTCATATCAATGCATTCCAACTAATCCTTCTCAAACCATCTATGCTTGTTATTGTTTCTTTGATTGTGGTGATCAAAAGAATTGA ATGGCTTCTTCTCGTATCATCTGCTTTGCTCTTATTTTTTCAAGTTCTTGTATGATCTTGGTACCTCGAGACGTCTTAGCTGCCAAAAGATGTCAAGACGTTTTATATAACACTGGGTGCTCTCTCAATGACTGTGGAAAGAAATGTTGGGATAAGCATCATACTATTTCATATCAATGCATTCCAACTAATCCTTCTCAAACCATCTATGCTTGTTATTGTTTCTTTGATTGTGGTGATCAAAAGAATTGA ATGGCTTCTTCTCGTATCATCTGCTTTGCTCTTATTTTTTCAAGTTCTTGTATGATCTTGGTACCTCGAGACGTCTTAGCTGCCAAAAGATGTCAAGACGTTTTATATAACACTGGGTGCTCTCTCAATGACTGTGGAAAGAAATGTTGGGATAAGCATCATACTATTTCATATCAATGCATTCCAACTAATCCTTCTCAAACCATCTATGCTTGTTATTGTTTCTTTGATTGTGGTGATCAAAAGAATTGA MASSRIICFALIFSSSCMILVPRDVLAAKRCQDVLYNTGCSLNDCGKKCWDKHHTISYQCIPTNPSQTIYACYCFFDCGDQKN Homology
BLAST of IVF0002094 vs. ExPASy TrEMBL
Match: A0A0A0L2R3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G576870 PE=3 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 4.9e-33 Identity = 66/83 (79.52%), Postives = 76/83 (91.57%), Query Frame = 0
BLAST of IVF0002094 vs. ExPASy TrEMBL
Match: A0A5A7THQ7 (S locus-related glycoprotein 1 binding pollen coat OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00450 PE=3 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 8.7e-22 Identity = 49/77 (63.64%), Postives = 62/77 (80.52%), Query Frame = 0
BLAST of IVF0002094 vs. ExPASy TrEMBL
Match: A0A0A0LVZ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G172580 PE=3 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 6.3e-20 Identity = 48/77 (62.34%), Postives = 60/77 (77.92%), Query Frame = 0
BLAST of IVF0002094 vs. ExPASy TrEMBL
Match: A0A4Y1RT05 (Uncharacterized protein OS=Prunus dulcis OX=3755 GN=Prudu_019451 PE=3 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 4.8e-12 Identity = 32/52 (61.54%), Postives = 40/52 (76.92%), Query Frame = 0
BLAST of IVF0002094 vs. ExPASy TrEMBL
Match: A0A6J5VH03 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS44688 PE=3 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 3.1e-11 Identity = 30/52 (57.69%), Postives = 39/52 (75.00%), Query Frame = 0
BLAST of IVF0002094 vs. NCBI nr
Match: KAE8649772.1 (hypothetical protein Csa_012405, partial [Cucumis sativus]) HSP 1 Score: 132 bits (332), Expect = 1.91e-38 Identity = 55/66 (83.33%), Postives = 62/66 (93.94%), Query Frame = 0
BLAST of IVF0002094 vs. NCBI nr
Match: KAA0042348.1 (S locus-related glycoprotein 1 binding pollen coat [Cucumis melo var. makuwa] >TYK15471.1 S locus-related glycoprotein 1 binding pollen coat [Cucumis melo var. makuwa]) HSP 1 Score: 110 bits (275), Expect = 1.48e-29 Identity = 49/77 (63.64%), Postives = 62/77 (80.52%), Query Frame = 0
BLAST of IVF0002094 vs. NCBI nr
Match: KGN64987.1 (hypothetical protein Csa_022748 [Cucumis sativus]) HSP 1 Score: 104 bits (259), Expect = 3.74e-27 Identity = 48/77 (62.34%), Postives = 60/77 (77.92%), Query Frame = 0
BLAST of IVF0002094 vs. NCBI nr
Match: BBH07492.1 (hypothetical protein Prudu_019451 [Prunus dulcis]) HSP 1 Score: 77.8 bits (190), Expect = 2.80e-16 Identity = 32/52 (61.54%), Postives = 40/52 (76.92%), Query Frame = 0
BLAST of IVF0002094 vs. NCBI nr
Match: CAB4286917.1 (unnamed protein product [Prunus armeniaca]) HSP 1 Score: 75.1 bits (183), Expect = 1.91e-15 Identity = 30/52 (57.69%), Postives = 39/52 (75.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|